MD14G1118300.v1.1

ABC transporter C family member 10-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
19312307 .. 19312549
243 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1118300.v1.1.491

Sequence Viewer

Length: 165 bp
ATGGATTGTACGAAAGTGCTTGCTATTAGTGATGGGAGATTGGTGGAGTATGATGAGCCAACAACGCTGATGAAGAACGAGGGCTCGTTATTTGGGCAGCTAGTCAAGGAATATTGGTCTCGTGTTGCTAATGCCGGCATCCACTCAGAAGATAGAATCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

55

Amino Acids

6.1

Weight (kDa)

4.83

Isoelectric Point (pI)

29.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 10
AluBI AGCT 1 cut(s) 100
AluI AGCT 1 cut(s) 100
Alw26I GTCTC 1 cut(s) 123
ApeKI GCWGC 1 cut(s) 97
BanII GRGCYC 1 cut(s) 86
BauI CACGAG 1 cut(s) 120
BbvI GCAGC 1 cut(s) 109
BccI CCATC 1 cut(s) 26
BcoDI GTCTC 1 cut(s) 123
BfaI CTAG 1 cut(s) 101
BisI GCNGC 1 cut(s) 98
BlsI GCNGC 1 cut(s) 99
BmsI GCATC 1 cut(s) 147
BsaI GGTCTC 1 cut(s) 123
Bse118I RCCGGY 1 cut(s) 134
BseGI GGATG 1 cut(s) 138
BseMII CTCAG 1 cut(s) 159
BseXI GCAGC 1 cut(s) 109
BsiSI CCGG 1 cut(s) 135
BsmAI GTCTC 1 cut(s) 123
Bso31I GGTCTC 1 cut(s) 123
Bsp1286I GDGCHC 1 cut(s) 86
BspCNI CTCAG 1 cut(s) 158
BspTNI GGTCTC 1 cut(s) 123
BsrFI RCCGGY 1 cut(s) 134
BssAI RCCGGY 1 cut(s) 134
BssSI CACGAG 1 cut(s) 120
Bst2BI CACGAG 1 cut(s) 120
BstC8I GCNNGC 2 cut(s) 21, 136
BstDEI CTNAG 1 cut(s) 145
BstF5I GGATG 1 cut(s) 138
BstMAI GTCTC 1 cut(s) 123
BstMWI GCNNNNNNNGC 1 cut(s) 64
BstV1I GCAGC 1 cut(s) 109
BtsCI GGATG 1 cut(s) 138
Cac8I GCNNGC 2 cut(s) 21, 136
Cfr10I RCCGGY 1 cut(s) 134
Csp6I GTAC 1 cut(s) 9
CviJI RGCY 3 cut(s) 58, 84, 100
CviKI_1 RGCY 3 cut(s) 58, 84, 100
CviQI GTAC 1 cut(s) 9
DdeI CTNAG 1 cut(s) 145
Eco24I GRGCYC 1 cut(s) 86
Eco31I GGTCTC 1 cut(s) 123
EcoT38I GRGCYC 1 cut(s) 86
FaiI YATR 1 cut(s) 51
Fnu4HI GCNGC 1 cut(s) 98
FokI GGATG 1 cut(s) 125
FriOI GRGCYC 1 cut(s) 86
Fsp4HI GCNGC 1 cut(s) 98
FspBI CTAG 1 cut(s) 101
GluI GCNGC 1 cut(s) 98
HapII CCGG 1 cut(s) 135
HinfI GANTC 1 cut(s) 156
HpaII CCGG 1 cut(s) 135
Hpy188I TCNGA 1 cut(s) 148
HpyF10VI GCNNNNNNNGC 1 cut(s) 64
HpyF3I CTNAG 1 cut(s) 145
KroI GCCGGC 1 cut(s) 134
KroNI GCCGGC 1 cut(s) 136
LpnPI CCDG 1 cut(s) 148
Lsp1109I GCAGC 1 cut(s) 109
LweI GCATC 1 cut(s) 147
MaeI CTAG 1 cut(s) 101
MboII GAAGA 2 cut(s) 85, 161
MhlI GDGCHC 1 cut(s) 86
MluCI AATT 1 cut(s) 160
MnlI CCTC 1 cut(s) 73
MroNI GCCGGC 1 cut(s) 134
MseI TTAA 1 cut(s) 163
MspI CCGG 1 cut(s) 135
MwoI GCNNNNNNNGC 1 cut(s) 64
NaeI GCCGGC 1 cut(s) 136
NgoMIV GCCGGC 1 cut(s) 134
PdiI GCCGGC 1 cut(s) 136
PfeI GAWTC 1 cut(s) 156
PkrI GCNGC 1 cut(s) 99
RsaI GTAC 1 cut(s) 10
RsaNI GTAC 1 cut(s) 9
SaqAI TTAA 1 cut(s) 163
SatI GCNGC 1 cut(s) 98
SduI GDGCHC 1 cut(s) 86
SetI ASST 1 cut(s) 102
SfaNI GCATC 1 cut(s) 147
SgeI CNNG 8 cut(s) 32, 91, 97, 113, 118, 132, 134, 147
Sse9I AATT 1 cut(s) 160
SspI AATATT 1 cut(s) 113
SspMI CTAG 1 cut(s) 101
TasI AATT 1 cut(s) 160
TfiI GAWTC 1 cut(s) 156
Tru1I TTAA 1 cut(s) 163
Tru9I TTAA 1 cut(s) 163
TseI GCWGC 1 cut(s) 97
TspDTI ATGAA 1 cut(s) 86
XspI CTAG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.