Rmu_sc0002416.1_g000004

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002416.1
OG0003612
Physical Location & Seq
Reverse (-)
16892 .. 20073
3182 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2562 bp
atggctagaggccctgtaagttccctttttcgaatttatggttctaagaaaaacatatctaggtttagggttttgatctggaatcaatatgaccgctctgtatcaccaaggttcacatcttttcctgctttagaggtccaaaatcgttcattttcaacgagcttagtggacccagttcgtgttaggttatcttcagagaacccaaaatttgtggggtgggatagtgtttttgttaagccattttctactggtgtggaagatggggatgaggatgtgagtgatagtagaacagtggttgataattttgatgcggatgtggggaagattgttgagtttgaggttccgagtgagaataaggaatatatttggtcggaatcagatgatgacagtgagaatgaggctgttattagtgattcaatggtggaagagttgggaagtggcgatgacaatgtgagttcagtgaaagcggttccgagtgagaataaggaatatatttggtcggaatcagatgatgatgatgatagtgagaatgaggctgttattagtgattcaatggtggaagagttgggaagtggtgatgacaatgtgagttcagtgaaagcggtgagctttcagcacgttgcgtcgcgtgaccctgttgagttgtatagggagctttgtgataatgagaagggtgcaaagcagacacggagtgattgggagactcttcaagagacattccggtattttggaaattcgggttgggcgactgatcaggctcttgcaatatacattggcaggtcattttttcccaatgctgtgtataagtttcggagctttttcttcaggaagtgttctgctgatgttgccaagtatgtggtgtcccttggtccatctgatgaagcagttaagtttttgtttcctttgtttgttgaatattgtttagaagagtttcctgatgagatcaagcgctttcgtggtatgattgcatccgcggatctgacgaagccccatacttggtttccatttgcacgggctatgaagcgtaagatagtttatcactgtggtccaaccaatagtgggaaaactttcaatgccttgcaacggtttatggaagcaaagaagggtatctattgcagtcctctgagattattggctatggaagtctttgacaaagtaaatgcgcttggggtgtattgtagtcttcacacagggcaagaaaagaaatttgtcccattctcaaaccatgctgcttgtacagtggaaatggtgtcaactgatgaaatgtatgatgttgctgtcattgatgagattcagatgatggcagatccatgtagaggttttgcatggacgcgagcattacttggcttaaaggctgatgagatacatttgtgtggagatccaagtgttctcaatgttgttcgaaagatctgttcagagactggtgatgagttgtatgagcagcattatgagaggtttaagccattagtggttgaagcaaaaacgctattgggagatcttaaaaatgttaggtctggagactgtgtggttgctttttcaagaagagaagtatttgaggttaaaattgcaattgaaaaacacaccaaccaccgctgctgtgttatttatggtgccttgccgccagaaactcgtagacagcaagctaatttgtttaatgatcaagataatgaatatgatgttctggtttctacggatgcggtgggaatgggtctgaatcttaatattaggagggttgtattctatagtcttgcgaaatacaatggtgacaaagttctcccagttccagcatctcaggtgaagcagattgctggaagagctggtcggagaggaagcatctatccagatggacttactaccacattgaatttagatgatctggattacttgattgagtgtctaaagcagccttttgatgaagttaagaaagtgggcctgtttcctttctacgagcaggttgagctatttgcagggcaacttcctaacattacgttctgccagctacttgaaaaatttggtgaaaattgccgcctggatgggtcatacttcttgtgtcgacatgatcatataaagaaggttgcaaatatgttacagaagattcaggcactatctctggaggatcgttttaacttctgttttgccccagtaaatataagagacccaaaagctatgttccatcttctaaagttcgcttcatcatatagccagaatctccctgtcaatattgctatgggcatgccaacgggttctgctcgtaatgataaggaactcttggatctcgagactaagcatcaagtgttgtctatgtatatgtggttgtcaaaccacttcaaggaagaaacttttccatacgtgaagaaggctgaagcaatggcaacagatattgctgaattgctgggtcagtctctagccaacgctaactggaaaccagaatcaaggcaggcatcaaagcctcaacggaaggaagatagtcatgaaaggccattgtcacgcatcaaactgtatcagaagaacaggcatgaccagtctgtaaattctgtgcactcagagaaggtagctgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

853

Amino Acids

96.78

Weight (kDa)

5.42

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DExH18_N PF23703 234 - 318 2.9e-39 DExH-box ATP-dependent RNA helicase DExH18, N-terminal
DEXQc_Suv3 PF22527 330 - 483 4.5e-69 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 502 - 610 4.2e-15 Helicase conserved C-terminal domain
Suv3_C_1 PF18147 692 - 734 3.4e-17 Suv3 C-terminal domain 1
SUV3_C PF12513 756 - 804 2.1e-11 ATP-dependent RNA helicase SUV3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 768, 1942
AccB1I GGYRCC 1 cut(s) 1610
AccBSI CCGCTC 1 cut(s) 96
AccI GTMKAC 2 cut(s) 1633, 2053
AccII CGCG 3 cut(s) 628, 974, 1333
AclWI GGATC 5 cut(s) 984, 1301, 1373, 2124, 2280
AcsI RAATTY 7 cut(s) 33, 206, 733, 1205, 1864, 2009, 2530
AcuI CTGAAG 3 cut(s) 177, 808, 2382
AdeI CACNNNGTG 1 cut(s) 692
AfaI GTAC 1 cut(s) 1237
AfeI AGCGCT 1 cut(s) 950
AfiI CCNNNNNNNGG 5 cut(s) 996, 1059, 1083, 1316, 2329
AjnI CCWGG 1 cut(s) 2028
AjuI GAANNNNNNNTTGG 2 cut(s) 724, 756
Alw21I GWGCWC 1 cut(s) 2541
Alw26I GTCTC 7 cut(s) 695, 707, 1412, 1512, 2148, 2273, 2406
Alw44I GTGCAC 1 cut(s) 2537
AlwI GGATC 5 cut(s) 984, 1301, 1373, 2124, 2280
AlwNI CAGNNNCTG 1 cut(s) 1421
Ama87I CYCGRG 1 cut(s) 2276
Aor51HI AGCGCT 1 cut(s) 950
AoxI GGCC 3 cut(s) 10, 1930, 2477
ApaLI GTGCAC 1 cut(s) 2537
ApeKI GCWGC 5 cut(s) 1229, 1441, 1593, 1903, 2555
ApoI RAATTY 7 cut(s) 33, 206, 733, 1205, 1864, 2009, 2530
Asp700I GAANNNNTTC 3 cut(s) 930, 1067, 2340
AspLEI GCGC 2 cut(s) 951, 1165
AspS9I GGNCC 6 cut(s) 11, 136, 169, 869, 1046, 1930
AsuHPI GGTGA 7 cut(s) 96, 587, 616, 1436, 1775, 1807, 2027
AsuII TTCGAA 2 cut(s) 31, 1402
AvaI CYCGRG 1 cut(s) 2276
AvaII GGWCC 4 cut(s) 136, 169, 869, 1046
BaeGI GKGCMC 1 cut(s) 2541
BaeI ACNNNNGTAYC 2 cut(s) 1355, 1388
BanI GGYRCC 1 cut(s) 1610
BbsI GAAGAC 1 cut(s) 1175
Bbv12I GWGCWC 1 cut(s) 2541
BbvI GCAGC 5 cut(s) 1216, 1453, 1580, 1915, 2542
BccI CCATC 6 cut(s) 254, 880, 1294, 1838, 2027, 2181
BciT130I CCWGG 1 cut(s) 2030
BclI TGATCA 3 cut(s) 751, 1657, 2059
BcoDI GTCTC 7 cut(s) 695, 707, 1412, 1512, 2148, 2273, 2406
BfaI CTAG 3 cut(s) 6, 60, 2405
BfmI CTRYAG 1 cut(s) 1741
BfoI RGCGCY 1 cut(s) 952
BfuAI ACCTGC 2 cut(s) 768, 1942
BglII AGATCT 2 cut(s) 1407, 1495
BisI GCNGC 7 cut(s) 1230, 1442, 1594, 1619, 1904, 2026, 2556
BlsI GCNGC 7 cut(s) 1231, 1443, 1595, 1620, 1905, 2027, 2557
Bme1390I CCNGG 1 cut(s) 2030
Bme18I GGWCC 4 cut(s) 136, 169, 869, 1046
BmeT110I CYCGRG 1 cut(s) 2276
BmgT120I GGNCC 6 cut(s) 11, 136, 169, 869, 1046, 1930
BmiI GGNNCC 4 cut(s) 171, 342, 471, 1612
BmrFI CCNGG 1 cut(s) 2030
BmrI ACTGGG 3 cut(s) 167, 1772, 2135
BmsI GCATC 8 cut(s) 298, 977, 1684, 1796, 1842, 2296, 2450, 2499
BmuI ACTGGG 3 cut(s) 167, 1772, 2135
BpiI GAAGAC 1 cut(s) 1175
BpmI CTGGAG 2 cut(s) 1536, 2132
Bpu14I TTCGAA 2 cut(s) 31, 1402
BsaAI YACGTR 1 cut(s) 2350
BsaI GGTCTC 1 cut(s) 2148
BsaJI CCNNGG 3 cut(s) 107, 865, 972
BsaWI WCCGGW 1 cut(s) 720
BsaXI ACNNNNNCTCC 2 cut(s) 1509, 1539
Bsc4I CCNNNNNNNGG 5 cut(s) 996, 1059, 1083, 1316, 2329
Bse1I ACTGG 7 cut(s) 173, 253, 1426, 1778, 2141, 2423, 2521
Bse3DI GCAATG 1 cut(s) 2373
BseBI CCWGG 1 cut(s) 2030
BseDI CCNNGG 3 cut(s) 107, 865, 972
BseGI GGATG 6 cut(s) 271, 277, 319, 968, 1699, 2038
BseLI CCNNNNNNNGG 5 cut(s) 996, 1059, 1083, 1316, 2329
BseMI GCAATG 1 cut(s) 2373
BseMII CTCAG 3 cut(s) 1115, 1805, 2556
BseNI ACTGG 7 cut(s) 173, 253, 1426, 1778, 2141, 2423, 2521
BseSI GKGCMC 1 cut(s) 2541
BseXI GCAGC 5 cut(s) 1216, 1453, 1580, 1915, 2542
BseYI CCCAGC 1 cut(s) 2392
Bsh1236I CGCG 3 cut(s) 628, 974, 1333
BshFI GGCC 3 cut(s) 12, 1932, 2479
BshNI GGYRCC 1 cut(s) 1610
BsiHKAI GWGCWC 1 cut(s) 2541
BsiHKCI CYCGRG 1 cut(s) 2276
BsiSI CCGG 1 cut(s) 721
BslFI GGGAC 2 cut(s) 847, 1196
BslI CCNNNNNNNGG 5 cut(s) 996, 1059, 1083, 1316, 2329
BsmAI GTCTC 7 cut(s) 695, 707, 1412, 1512, 2148, 2273, 2406
BsmFI GGGAC 2 cut(s) 847, 1196
BsnI GGCC 3 cut(s) 12, 1932, 2479
Bso31I GGTCTC 1 cut(s) 2148
BsoBI CYCGRG 1 cut(s) 2276
Bsp119I TTCGAA 2 cut(s) 31, 1402
Bsp1286I GDGCHC 1 cut(s) 2541
Bsp1407I TGTACA 1 cut(s) 1235
BspANI GGCC 3 cut(s) 12, 1932, 2479
BspCNI CTCAG 3 cut(s) 1116, 1804, 2555
BspFNI CGCG 3 cut(s) 628, 974, 1333
BspHI TCATGA 1 cut(s) 2470
BspLI GGNNCC 4 cut(s) 171, 342, 471, 1612
BspMI ACCTGC 2 cut(s) 768, 1942
BspPI GGATC 5 cut(s) 984, 1301, 1373, 2124, 2280
BspQI GCTCTTC 1 cut(s) 1807
BspT104I TTCGAA 2 cut(s) 31, 1402
BspT107I GGYRCC 1 cut(s) 1610
BspTNI GGTCTC 1 cut(s) 2148
BsrBI CCGCTC 1 cut(s) 96
BsrDI GCAATG 1 cut(s) 2373
BsrGI TGTACA 1 cut(s) 1235
BsrI ACTGG 7 cut(s) 173, 253, 1426, 1778, 2141, 2423, 2521
BssECI CCNNGG 3 cut(s) 107, 865, 972
BssT1I CCWWGG 2 cut(s) 107, 865
Bst2UI CCWGG 1 cut(s) 2030
Bst4CI ACNGT 7 cut(s) 292, 389, 1043, 1086, 1240, 1523, 2499
Bst6I CTCTTC 6 cut(s) 420, 555, 711, 921, 1537, 1807
BstAUI TGTACA 1 cut(s) 1235
BstBAI YACGTR 1 cut(s) 2350
BstBI TTCGAA 2 cut(s) 31, 1402
BstC8I GCNNGC 5 cut(s) 1335, 1641, 1997, 2234, 2439
BstDEI CTNAG 7 cut(s) 45, 163, 1124, 1791, 2283, 2542, 2559
BstDSI CCRYGG 1 cut(s) 972
BstF5I GGATG 6 cut(s) 271, 277, 319, 968, 1699, 2038
BstFNI CGCG 3 cut(s) 628, 974, 1333
BstH2I RGCGCY 1 cut(s) 952
BstHHI GCGC 2 cut(s) 951, 1165
BstMAI GTCTC 7 cut(s) 695, 707, 1412, 1512, 2148, 2273, 2406
BstMWI GCNNNNNNNGC 3 cut(s) 845, 1814, 1957
BstNI CCWGG 1 cut(s) 2030
BstNSI RCATGY 1 cut(s) 2236
BstSCI CCNGG 1 cut(s) 2028
BstSFI CTRYAG 1 cut(s) 1741
BstSLI GKGCMC 1 cut(s) 2541
BstUI CGCG 3 cut(s) 628, 974, 1333
BstV1I GCAGC 5 cut(s) 1216, 1453, 1580, 1915, 2542
BstV2I GAAGAC 1 cut(s) 1175
BstX2I RGATCY 6 cut(s) 976, 1306, 1378, 1407, 1495, 2272
BstXI CCANNNNNNTGG 1 cut(s) 856
BstYI RGATCY 6 cut(s) 976, 1306, 1378, 1407, 1495, 2272
BsuRI GGCC 3 cut(s) 12, 1932, 2479
BtgI CCRYGG 1 cut(s) 972
BtgZI GCGATG 1 cut(s) 456
BtsCI GGATG 6 cut(s) 271, 277, 319, 968, 1699, 2038
BtsIMutI CAGTG 6 cut(s) 297, 394, 465, 600, 1039, 1245
BveI ACCTGC 2 cut(s) 768, 1942
Cac8I GCNNGC 5 cut(s) 1335, 1641, 1997, 2234, 2439
CaiI CAGNNNCTG 1 cut(s) 1421
CciI TCATGA 1 cut(s) 2470
CfoI GCGC 2 cut(s) 951, 1165
Cfr13I GGNCC 6 cut(s) 11, 136, 169, 869, 1046, 1930
Cfr42I CCGCGG 1 cut(s) 975
CseI GACGC 2 cut(s) 612, 1339
Csp6I GTAC 1 cut(s) 1236
CspCI CAANNNNNGTGG 2 cut(s) 192, 227
CviAII CATG 7 cut(s) 1226, 1311, 1326, 2057, 2233, 2471, 2516
CviQI GTAC 1 cut(s) 1236
DdeI CTNAG 7 cut(s) 45, 163, 1124, 1791, 2283, 2542, 2559
DraIII CACNNNGTG 1 cut(s) 692
Eam1104I CTCTTC 6 cut(s) 420, 555, 711, 921, 1537, 1807
EarI CTCTTC 6 cut(s) 420, 555, 711, 921, 1537, 1807
Eco130I CCWWGG 2 cut(s) 107, 865
Eco31I GGTCTC 1 cut(s) 2148
Eco47I GGWCC 4 cut(s) 136, 169, 869, 1046
Eco47III AGCGCT 1 cut(s) 950
Eco57I CTGAAG 3 cut(s) 177, 808, 2382
Eco88I CYCGRG 1 cut(s) 2276
EcoO109I RGGNCCY 1 cut(s) 11
EcoRII CCWGG 1 cut(s) 2028
EcoT14I CCWWGG 2 cut(s) 107, 865
ErhI CCWWGG 2 cut(s) 107, 865
FaeI CATG 7 cut(s) 1229, 1314, 1329, 2060, 2236, 2474, 2519
FalI AAGNNNNNCTT 2 cut(s) 2252, 2284
FaqI GGGAC 2 cut(s) 847, 1196
FatI CATG 7 cut(s) 1225, 1310, 1325, 2056, 2232, 2470, 2515
FbaI TGATCA 3 cut(s) 751, 1657, 2059
FblI GTMKAC 2 cut(s) 1633, 2053
Fnu4HI GCNGC 7 cut(s) 1230, 1442, 1594, 1619, 1904, 2026, 2556
FokI GGATG 6 cut(s) 278, 284, 326, 955, 1706, 2045
Fsp4HI GCNGC 7 cut(s) 1230, 1442, 1594, 1619, 1904, 2026, 2556
FspBI CTAG 3 cut(s) 6, 60, 2405
GlaI GCGC 2 cut(s) 950, 1164
GluI GCNGC 7 cut(s) 1230, 1442, 1594, 1619, 1904, 2026, 2556
GsaI CCCAGC 1 cut(s) 2396
GsuI CTGGAG 2 cut(s) 1536, 2132
HaeII RGCGCY 1 cut(s) 952
HaeIII GGCC 3 cut(s) 12, 1932, 2479
HapII CCGG 1 cut(s) 721
HgaI GACGC 2 cut(s) 612, 1339
HhaI GCGC 2 cut(s) 951, 1165
Hin1II CATG 7 cut(s) 1229, 1314, 1329, 2060, 2236, 2474, 2519
Hin6I GCGC 2 cut(s) 949, 1163
HinP1I GCGC 2 cut(s) 949, 1163
HincII GTYRAC 2 cut(s) 1254, 2054
HindII GTYRAC 2 cut(s) 1254, 2054
HpaII CCGG 1 cut(s) 721
HphI GGTGA 7 cut(s) 96, 587, 616, 1436, 1775, 1807, 2027
Hpy166II GTNNAC 6 cut(s) 114, 169, 1254, 1634, 2054, 2539
Hpy8I GTNNAC 6 cut(s) 114, 169, 1254, 1634, 2054, 2539
Hpy99I CGWCG 1 cut(s) 628
HpyAV CCTTC 6 cut(s) 664, 1096, 2065, 2350, 2452, 2542
HpyCH4III ACNGT 7 cut(s) 292, 389, 1043, 1086, 1240, 1523, 2499
HpyCH4IV ACGT 3 cut(s) 618, 1988, 2349
HpyF10VI GCNNNNNNNGC 3 cut(s) 845, 1814, 1957
HpyF3I CTNAG 7 cut(s) 45, 163, 1124, 1791, 2283, 2542, 2559
HpySE526I ACGT 3 cut(s) 618, 1988, 2349
Hsp92II CATG 7 cut(s) 1229, 1314, 1329, 2060, 2236, 2474, 2519
HspAI GCGC 2 cut(s) 949, 1163
Ksp22I TGATCA 3 cut(s) 751, 1657, 2059
KspI CCGCGG 1 cut(s) 975
LguI GCTCTTC 1 cut(s) 1807
LmnI GCTCC 2 cut(s) 652, 813
Lsp1109I GCAGC 5 cut(s) 1216, 1453, 1580, 1915, 2542
LweI GCATC 8 cut(s) 298, 977, 1684, 1796, 1842, 2296, 2450, 2499
MaeI CTAG 3 cut(s) 6, 60, 2405
MaeII ACGT 3 cut(s) 618, 1988, 2349
MaeIII GTNAC 4 cut(s) 629, 1763, 2085, 2484
MbiI CCGCTC 1 cut(s) 96
MfeI CAATTG 1 cut(s) 1569
MflI RGATCY 6 cut(s) 976, 1306, 1378, 1407, 1495, 2272
MhlI GDGCHC 1 cut(s) 2541
MlyI GAGTC 1 cut(s) 697
MmeI TCCRAC 4 cut(s) 351, 480, 1073, 1802
MroXI GAANNNNTTC 3 cut(s) 930, 1067, 2340
MslI CAYNNNNRTG 1 cut(s) 1371
MspA1I CMGCKG 2 cut(s) 974, 1593
MspI CCGG 1 cut(s) 721
MspR9I CCNGG 1 cut(s) 2030
MunI CAATTG 1 cut(s) 1569
MvaI CCWGG 1 cut(s) 2030
MvnI CGCG 3 cut(s) 628, 974, 1333
MwoI GCNNNNNNNGC 3 cut(s) 845, 1814, 1957
NlaIII CATG 7 cut(s) 1229, 1314, 1329, 2060, 2236, 2474, 2519
NlaIV GGNNCC 4 cut(s) 171, 342, 471, 1612
NmuCI GTSAC 3 cut(s) 629, 1763, 2484
NspI RCATGY 1 cut(s) 2236
NspV TTCGAA 2 cut(s) 31, 1402
PaeI GCATGC 1 cut(s) 2236
PaeR7I CTCGAG 1 cut(s) 2276
PagI TCATGA 1 cut(s) 2470
PciSI GCTCTTC 1 cut(s) 1807
PcsI WCGNNNNNNNCGW 1 cut(s) 743
PdmI GAANNNNTTC 3 cut(s) 930, 1067, 2340
PkrI GCNGC 7 cut(s) 1231, 1443, 1595, 1620, 1905, 2027, 2557
PleI GAGTC 1 cut(s) 697
PpsI GAGTC 1 cut(s) 697
Ppu21I YACGTR 1 cut(s) 2350
Psp6I CCWGG 1 cut(s) 2028
PspFI CCCAGC 1 cut(s) 2392
PspGI CCWGG 1 cut(s) 2028
PspN4I GGNNCC 4 cut(s) 171, 342, 471, 1612
PspPI GGNCC 6 cut(s) 11, 136, 169, 869, 1046, 1930
PstNI CAGNNNCTG 1 cut(s) 1421
PsuI RGATCY 6 cut(s) 976, 1306, 1378, 1407, 1495, 2272
RsaI GTAC 1 cut(s) 1237
RsaNI GTAC 1 cut(s) 1236
RseI CAYNNNNRTG 1 cut(s) 1371
SacII CCGCGG 1 cut(s) 975
SalI GTCGAC 1 cut(s) 2052
SapI GCTCTTC 1 cut(s) 1807
SatI GCNGC 7 cut(s) 1230, 1442, 1594, 1619, 1904, 2026, 2556
Sau96I GGNCC 6 cut(s) 11, 136, 169, 869, 1046, 1930
SchI GAGTC 1 cut(s) 697
ScrFI CCNGG 1 cut(s) 2030
SduI GDGCHC 1 cut(s) 2541
SfaNI GCATC 8 cut(s) 298, 977, 1684, 1796, 1842, 2296, 2450, 2499
SfcI CTRYAG 1 cut(s) 1741
Sfr274I CTCGAG 1 cut(s) 2276
Sfr303I CCGCGG 1 cut(s) 975
SfuI TTCGAA 2 cut(s) 31, 1402
SgrBI CCGCGG 1 cut(s) 975
SinI GGWCC 4 cut(s) 136, 169, 869, 1046
SlaI CTCGAG 1 cut(s) 2276
SmiMI CAYNNNNRTG 1 cut(s) 1371
SmlI CTYRAG 1 cut(s) 2276
SmoI CTYRAG 1 cut(s) 2276
SphI GCATGC 1 cut(s) 2236
SspI AATATT 3 cut(s) 917, 1723, 2221
SspMI CTAG 3 cut(s) 6, 60, 2405
StyD4I CCNGG 1 cut(s) 2028
StyI CCWWGG 2 cut(s) 107, 865
TaaI ACNGT 7 cut(s) 292, 389, 1043, 1086, 1240, 1523, 2499
TaiI ACGT 3 cut(s) 621, 1991, 2352
TaqI TCGA 4 cut(s) 31, 1402, 2053, 2277
TatI WGTACW 1 cut(s) 1235
TauI GCSGC 2 cut(s) 1621, 2028
TscAI CASTG 6 cut(s) 297, 394, 465, 600, 1046, 1245
TseFI GTSAC 3 cut(s) 629, 1763, 2484
TseI GCWGC 5 cut(s) 1229, 1441, 1593, 1903, 2555
Tsp45I GTSAC 3 cut(s) 629, 1763, 2484
TspDTI ATGAA 8 cut(s) 138, 894, 1034, 1275, 1683, 1929, 2181, 2487
TspGWI ACGGA 3 cut(s) 703, 1706, 2470
TspRI CASTG 6 cut(s) 297, 394, 465, 600, 1046, 1245
VneI GTGCAC 1 cut(s) 2537
VpaK11BI GGWCC 4 cut(s) 136, 169, 869, 1046
XapI RAATTY 7 cut(s) 33, 206, 733, 1205, 1864, 2009, 2530
XceI RCATGY 1 cut(s) 2236
XhoI CTCGAG 1 cut(s) 2276
XmiI GTMKAC 2 cut(s) 1633, 2053
XmnI GAANNNNTTC 3 cut(s) 930, 1067, 2340
XspI CTAG 3 cut(s) 6, 60, 2405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.