Rmu_sc0002646.1_g000023

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002646.1
OG0018855
Physical Location & Seq
Forward (+)
96309 .. 98363
2055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002646.1_g000023.1.cds

Sequence Viewer

Length: 2055 bp
atgggcagccaagttgacaactttactatcccatcagtcctcaaggcctgtggtcaagcttctatggaactattaggaagagagacccatggtttcgcactaaagggcggtttggatggtgacgctttcgtgtgcaatgcattgatccaaatgtatagtgaatgtgggagcttggtgttggcacgcctagtatttgatgaaatgattgaaagagatgtggtttcttggagtaccatgattaatagctatgtgaggaacagagtgtttggtgaggcattggaacttataagggagatgcattgcttgcaagtgaagcctagtgaggttgctatgatgagcatggttagtctatttgctgacattgctgatgtgaaaatggggaaagcaatgcatgcttatgttgcgaggaatagcagtaatgagagaatggtggttcatgttactactgctttagtagatatgtatgtcaagtgtgggaatttggcttatggaaggaggctgtttgatgggttggctcagaaaagtgttgtttcctggaccgcgatggtcgcggggtgcattcgttgcaatgaggtagaagagggggtgaaactttttaagagaatgctggaggagaggaagtttcctaatgagattacaatgttgagtttggttatcgagtcggggtctgttggagctctggaattggggaagtggctgcatgcctatgttttgagaaatgggtttatcatgtctttggctttggccactgctttggttgatatgtatgggaagtgtggtgaagccgaatgtgcaagggctgtgtttgacagcatggagaagaaagatgtcatgatttggagtgctatgatctcggcttatgcacgctccaattgtactaatcaggcttcggagctctttgcccggatgaaggatagtggaataaggccaaatcaagttacaatggttagcctcatttcactatgtgcagaagtaggagcccttgatctgggaaaatgggttcattcttacataaaccagcaacggatagaagttgatgtgatactaagaacggctctagtggacatgtatgcaaaatgtggggagatagatgcggctctcaggctgtttagtgaagccagatatcgagacagtcgaatgtggaatgctatgatcactggattttccatgcatggttgtgggaaacaagctttagagctctttgaagaaatgcagagagcaggtgttgagcctagcgacatcacatttatagggctacttcatgcttgtagccatgctgggttggtggcagatggaaagaaggttttcgagaaaatggtacttgactttggcttggctccaaaggttgagcactatggatgcatggtggatttgctaggccgagctgggaagctcgatgaggctcacgagttgatcaaaagcatgcccgtggagcctaacgcaattgtttggggctccctgcttgctgcctgcaaaattcataagagtcccaacttggctgaagtggcagcaagacaactgcttgagttggaacctccaaattgcggttacaacgttctgatgtcaaacatctatgcagcatcaaacagatggattgatgttgctggggttagaaaagctatgaaagataaaggaaccaagaaagaaccaggtctcagctcaattgaagtaaatggtgcagttcatgacttcatgatgggtgataaaacacacccgcaaacaagaaaaatttatgaaatgctggctgagatgatcaagaagctaaaggaggctggatacactcctaatacatctgtggttttgcagaacatagatgaggaagagaaagaaactgcggtaaactatcatagtgagaaactggccatggcatttggtctaatcagtactgctgcaggtaccccaattcggattgtgaaaaatctccgagtttgtgatgactgtcacacagcaacaaagctgttatcaaagatttatggcagagtaatgacagtaagggaccgtaatcgctttcaccacttcatagaaggatcttgttcttgtggtgactattggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

684

Amino Acids

75.87

Weight (kDa)

6.54

Isoelectric Point (pI)

36.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018855)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g02300
malus_domestica MD12G1245600.v1.1
prunus_persica Prupe.6G348400_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0450051
rosa_laevigata RLG00000025761
rosa_multiflora Rmu_sc0002646.1_g000023
rosa_rugosa Rorug02G0625100
rosa_samantha Rh3DG024800
rosa_wichuraiana Rw3G001930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 287
AarI CACCTGC 1 cut(s) 1211
Acc36I ACCTGC 2 cut(s) 1211, 1883
Acc65I GGTACC 1 cut(s) 1895
AccB1I GGYRCC 1 cut(s) 1895
AccII CGCG 2 cut(s) 542, 551
AciI CCGC 7 cut(s) 108, 540, 551, 1094, 1545, 1715, 1835
AclI AACGTT 1 cut(s) 1554
AclWI GGATC 2 cut(s) 139, 2035
AcoI YGGCCR 2 cut(s) 744, 1860
AcsI RAATTY 3 cut(s) 478, 1476, 1728
AcuI CTGAAG 1 cut(s) 1521
AdeI CACNNNGTG 1 cut(s) 965
AfaI GTAC 5 cut(s) 232, 877, 1320, 1885, 1897
AfiI CCNNNNNNNGG 4 cut(s) 910, 988, 1544, 1905
AflIII ACRYGT 1 cut(s) 1065
AgsI TTSAA 3 cut(s) 209, 1205, 1667
AjnI CCWGG 2 cut(s) 533, 1648
AloI GAACNNNNNNTCC 2 cut(s) 984, 1016
Alw21I GWGCWC 4 cut(s) 679, 897, 1200, 1353
Alw26I GTCTC 3 cut(s) 77, 1122, 1658
AlwI GGATC 2 cut(s) 139, 2035
AoxI GGCC 5 cut(s) 45, 744, 926, 1378, 1860
ApeKI GCWGC 6 cut(s) 6, 697, 1466, 1508, 1577, 1889
ApoI RAATTY 3 cut(s) 478, 1476, 1728
AseI ATTAAT 1 cut(s) 240
Asp700I GAANNNNTTC 1 cut(s) 1304
Asp718I GGTACC 1 cut(s) 1895
AspS9I GGNCC 2 cut(s) 537, 1996
AsuC2I CCSGG 1 cut(s) 904
AsuHPI GGTGA 7 cut(s) 131, 281, 598, 791, 1712, 2003, 2054
AvaII GGWCC 2 cut(s) 537, 1996
BalI TGGCCA 2 cut(s) 746, 1862
BanI GGYRCC 1 cut(s) 1895
BanII GRGCYC 5 cut(s) 679, 897, 982, 1200, 1457
BauI CACGAG 1 cut(s) 1406
Bbv12I GWGCWC 4 cut(s) 679, 897, 1200, 1353
BbvI GCAGC 6 cut(s) 18, 684, 1453, 1520, 1589, 1876
BccI CCATC 7 cut(s) 40, 110, 500, 538, 1286, 1584, 1690
BceAI ACGGC 1 cut(s) 1068
BciT130I CCWGG 2 cut(s) 535, 1650
BciVI GTATCC 1 cut(s) 1769
BclI TGATCA 3 cut(s) 1152, 1413, 1752
BcnI CCSGG 1 cut(s) 904
BcoDI GTCTC 3 cut(s) 77, 1122, 1658
BfaI CTAG 5 cut(s) 188, 318, 1058, 1233, 1376
BfmI CTRYAG 1 cut(s) 1890
BfuAI ACCTGC 2 cut(s) 1211, 1883
BfuI GTATCC 1 cut(s) 1769
BisI GCNGC 7 cut(s) 7, 698, 1095, 1467, 1509, 1578, 1890
BlsI GCNGC 7 cut(s) 8, 699, 1096, 1468, 1510, 1579, 1891
BmcAI AGTACT 1 cut(s) 1885
Bme1390I CCNGG 3 cut(s) 535, 904, 1650
Bme18I GGWCC 2 cut(s) 537, 1996
BmgT120I GGNCC 2 cut(s) 537, 1996
BmiI GGNNCC 8 cut(s) 979, 1338, 1434, 1456, 1533, 1636, 1897, 1997
BmrFI CCNGG 3 cut(s) 535, 904, 1650
BmsI GCATC 4 cut(s) 285, 1081, 1349, 1589
BpmI CTGGAG 1 cut(s) 629
BpuEI CTTGAG 2 cut(s) 26, 1544
BpuMI CCSGG 1 cut(s) 904
BsaI GGTCTC 2 cut(s) 77, 1658
BsaJI CCNNGG 3 cut(s) 88, 1428, 1863
BsaXI ACNNNNNCTCC 2 cut(s) 605, 635
Bsc4I CCNNNNNNNGG 4 cut(s) 910, 988, 1544, 1905
Bse1I ACTGG 2 cut(s) 1162, 1863
Bse3DI GCAATG 5 cut(s) 142, 298, 360, 393, 574
BseBI CCWGG 2 cut(s) 535, 1650
BseDI CCNNGG 3 cut(s) 88, 1428, 1863
BseGI GGATG 3 cut(s) 121, 912, 1364
BseLI CCNNNNNNNGG 4 cut(s) 910, 988, 1544, 1905
BseMI GCAATG 5 cut(s) 142, 298, 360, 393, 574
BseMII CTCAG 4 cut(s) 530, 1114, 1669, 1737
BseNI ACTGG 2 cut(s) 1162, 1863
BseRI GAGGAG 1 cut(s) 626
BseXI GCAGC 6 cut(s) 18, 684, 1453, 1520, 1589, 1876
BseYI CCCAGC 3 cut(s) 1277, 1385, 1604
BsgI GTGCAG 2 cut(s) 987, 1698
Bsh1236I CGCG 2 cut(s) 542, 551
BshFI GGCC 5 cut(s) 47, 746, 928, 1380, 1862
BshNI GGYRCC 1 cut(s) 1895
BsiHKAI GWGCWC 4 cut(s) 679, 897, 1200, 1353
BsiSI CCGG 1 cut(s) 904
BslFI GGGAC 2 cut(s) 1473, 2009
BslI CCNNNNNNNGG 4 cut(s) 910, 988, 1544, 1905
BsmAI GTCTC 3 cut(s) 77, 1122, 1658
BsmFI GGGAC 2 cut(s) 1473, 2009
BsmI GAATGC 3 cut(s) 558, 609, 1150
BsnI GGCC 5 cut(s) 47, 746, 928, 1380, 1862
Bso31I GGTCTC 2 cut(s) 77, 1658
Bsp1286I GDGCHC 6 cut(s) 679, 897, 982, 1200, 1353, 1457
Bsp143I GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
Bsp19I CCATGG 2 cut(s) 88, 1863
BspACI CCGC 7 cut(s) 108, 540, 551, 1094, 1545, 1715, 1835
BspANI GGCC 5 cut(s) 47, 746, 928, 1380, 1862
BspCNI CTCAG 4 cut(s) 529, 1113, 1668, 1738
BspFNI CGCG 2 cut(s) 542, 551
BspHI TCATGA 3 cut(s) 831, 1684, 1692
BspLI GGNNCC 8 cut(s) 979, 1338, 1434, 1456, 1533, 1636, 1897, 1997
BspMAI CTGCAG 1 cut(s) 1894
BspMI ACCTGC 2 cut(s) 1211, 1883
BspPI GGATC 2 cut(s) 139, 2035
BspT107I GGYRCC 1 cut(s) 1895
BspTNI GGTCTC 2 cut(s) 77, 1658
BsrDI GCAATG 5 cut(s) 142, 298, 360, 393, 574
BsrI ACTGG 2 cut(s) 1162, 1863
BssECI CCNNGG 3 cut(s) 88, 1428, 1863
BssMI GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
BssSI CACGAG 1 cut(s) 1406
BssT1I CCWWGG 2 cut(s) 88, 1863
Bst2BI CACGAG 1 cut(s) 1406
Bst2UI CCWGG 2 cut(s) 535, 1650
Bst4CI ACNGT 4 cut(s) 1133, 1940, 1990, 2000
Bst6I CTCTTC 3 cut(s) 73, 573, 1815
BstAPI GCANNNNNTGC 3 cut(s) 304, 392, 564
BstC8I GCNNGC 9 cut(s) 184, 305, 393, 702, 865, 1424, 1464, 1471, 1743
BstDEI CTNAG 5 cut(s) 516, 1046, 1100, 1655, 1746
BstDSI CCRYGG 3 cut(s) 88, 1428, 1863
BstF5I GGATG 3 cut(s) 121, 912, 1364
BstFNI CGCG 2 cut(s) 542, 551
BstKTI GATC 7 cut(s) 147, 852, 988, 1155, 1416, 1755, 2030
BstMAI GTCTC 3 cut(s) 77, 1122, 1658
BstMBI GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
BstNI CCWGG 2 cut(s) 535, 1650
BstNSI RCATGY 4 cut(s) 395, 704, 1069, 1426
BstSCI CCNGG 3 cut(s) 533, 902, 1648
BstSFI CTRYAG 1 cut(s) 1890
BstUI CGCG 2 cut(s) 542, 551
BstV1I GCAGC 6 cut(s) 18, 684, 1453, 1520, 1589, 1876
BstX2I RGATCY 1 cut(s) 2027
BstXI CCANNNNNNTGG 1 cut(s) 754
BstYI RGATCY 1 cut(s) 2027
BsuI GTATCC 1 cut(s) 1769
BsuRI GGCC 5 cut(s) 47, 746, 928, 1380, 1862
BtgI CCRYGG 3 cut(s) 88, 1428, 1863
BtgZI GCGATG 1 cut(s) 557
BtsCI GGATG 3 cut(s) 121, 912, 1364
BtsI GCAGTG 1 cut(s) 747
BtsIMutI CAGTG 2 cut(s) 747, 1155
BveI ACCTGC 2 cut(s) 1211, 1883
Cac8I GCNNGC 9 cut(s) 184, 305, 393, 702, 865, 1424, 1464, 1471, 1743
CciI TCATGA 3 cut(s) 831, 1684, 1692
Cfr13I GGNCC 2 cut(s) 537, 1996
CseI GACGC 1 cut(s) 131
CsiI ACCWGGT 1 cut(s) 1648
Csp6I GTAC 5 cut(s) 231, 876, 1319, 1884, 1896
CspCI CAANNNNNGTGG 2 cut(s) 31, 66
CviQI GTAC 5 cut(s) 231, 876, 1319, 1884, 1896
DdeI CTNAG 5 cut(s) 516, 1046, 1100, 1655, 1746
DpnI GATC 7 cut(s) 146, 851, 987, 1154, 1415, 1754, 2029
DpnII GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
DraIII CACNNNGTG 1 cut(s) 965
EaeI YGGCCR 2 cut(s) 744, 1860
Eam1104I CTCTTC 3 cut(s) 73, 573, 1815
EarI CTCTTC 3 cut(s) 73, 573, 1815
Ecl136II GAGCTC 3 cut(s) 677, 895, 1198
Eco130I CCWWGG 2 cut(s) 88, 1863
Eco147I AGGCCT 1 cut(s) 47
Eco24I GRGCYC 5 cut(s) 679, 897, 982, 1200, 1457
Eco31I GGTCTC 2 cut(s) 77, 1658
Eco32I GATATC 1 cut(s) 1124
Eco47I GGWCC 2 cut(s) 537, 1996
Eco53kI GAGCTC 3 cut(s) 677, 895, 1198
Eco57I CTGAAG 1 cut(s) 1521
EcoICRI GAGCTC 3 cut(s) 677, 895, 1198
EcoRII CCWGG 2 cut(s) 533, 1648
EcoRV GATATC 1 cut(s) 1124
EcoT14I CCWWGG 2 cut(s) 88, 1863
EcoT22I ATGCAT 5 cut(s) 142, 300, 393, 1173, 1364
EcoT38I GRGCYC 5 cut(s) 679, 897, 982, 1200, 1457
ErhI CCWWGG 2 cut(s) 88, 1863
FaqI GGGAC 2 cut(s) 1473, 2009
FauI CCCGC 2 cut(s) 544, 1722
FbaI TGATCA 3 cut(s) 1152, 1413, 1752
Fnu4HI GCNGC 7 cut(s) 7, 698, 1095, 1467, 1509, 1578, 1890
FokI GGATG 3 cut(s) 128, 919, 1371
FriOI GRGCYC 5 cut(s) 679, 897, 982, 1200, 1457
Fsp4HI GCNGC 7 cut(s) 7, 698, 1095, 1467, 1509, 1578, 1890
FspBI CTAG 5 cut(s) 188, 318, 1058, 1233, 1376
GluI GCNGC 7 cut(s) 7, 698, 1095, 1467, 1509, 1578, 1890
GsaI CCCAGC 3 cut(s) 1281, 1389, 1608
GsuI CTGGAG 1 cut(s) 629
HaeIII GGCC 5 cut(s) 47, 746, 928, 1380, 1862
HapII CCGG 1 cut(s) 904
HgaI GACGC 1 cut(s) 131
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
HindIII AAGCTT 2 cut(s) 57, 1188
HinfI GANTC 2 cut(s) 659, 1486
HpaII CCGG 1 cut(s) 904
HphI GGTGA 7 cut(s) 131, 281, 598, 791, 1712, 2003, 2054
Hpy166II GTNNAC 3 cut(s) 16, 1063, 1840
Hpy188I TCNGA 5 cut(s) 519, 892, 1560, 1908, 1925
Hpy188III TCNNGA 8 cut(s) 680, 832, 1127, 1309, 1406, 1685, 1693, 1756
Hpy8I GTNNAC 3 cut(s) 16, 1063, 1840
HpyAV CCTTC 4 cut(s) 486, 904, 1294, 2018
HpyCH4III ACNGT 4 cut(s) 1133, 1940, 1990, 2000
HpyCH4IV ACGT 1 cut(s) 1554
HpyF3I CTNAG 5 cut(s) 516, 1046, 1100, 1655, 1746
HpySE526I ACGT 1 cut(s) 1554
KpnI GGTACC 1 cut(s) 1899
Ksp22I TGATCA 3 cut(s) 1152, 1413, 1752
Kzo9I GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
LmnI GCTCC 8 cut(s) 168, 674, 872, 892, 977, 1342, 1432, 1460
Lsp1109I GCAGC 6 cut(s) 18, 684, 1453, 1520, 1589, 1876
LweI GCATC 4 cut(s) 285, 1081, 1349, 1589
MabI ACCWGGT 1 cut(s) 1648
MaeI CTAG 5 cut(s) 188, 318, 1058, 1233, 1376
MaeII ACGT 1 cut(s) 1554
MaeIII GTNAC 6 cut(s) 119, 439, 937, 1547, 1940, 2042
MalI GATC 7 cut(s) 146, 851, 987, 1154, 1415, 1754, 2029
MboI GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
MboII GAAGA 5 cut(s) 90, 590, 832, 1217, 1832
MfeI CAATTG 3 cut(s) 871, 1443, 1662
MflI RGATCY 1 cut(s) 2027
MhlI GDGCHC 6 cut(s) 679, 897, 982, 1200, 1353, 1457
MlsI TGGCCA 2 cut(s) 746, 1862
MluCI AATT 9 cut(s) 478, 683, 871, 1443, 1476, 1540, 1662, 1728, 1902
MluNI TGGCCA 2 cut(s) 746, 1862
MlyI GAGTC 2 cut(s) 668, 1495
MmeI TCCRAC 2 cut(s) 652, 1509
Mox20I TGGCCA 2 cut(s) 746, 1862
Mph1103I ATGCAT 5 cut(s) 142, 300, 393, 1173, 1364
MroXI GAANNNNTTC 1 cut(s) 1304
MscI TGGCCA 2 cut(s) 746, 1862
MseI TTAA 2 cut(s) 240, 597
MslI CAYNNNNRTG 4 cut(s) 396, 705, 1176, 1427
Msp20I TGGCCA 2 cut(s) 746, 1862
MspI CCGG 1 cut(s) 904
MspR9I CCNGG 3 cut(s) 535, 904, 1650
MunI CAATTG 3 cut(s) 871, 1443, 1662
Mva1269I GAATGC 3 cut(s) 558, 609, 1150
MvaI CCWGG 2 cut(s) 535, 1650
MvnI CGCG 2 cut(s) 542, 551
NciI CCSGG 1 cut(s) 904
NcoI CCATGG 2 cut(s) 88, 1863
NdeII GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
NlaIV GGNNCC 8 cut(s) 979, 1338, 1434, 1456, 1533, 1636, 1897, 1997
NmeAIII GCCGAG 2 cut(s) 833, 1406
NmuCI GTSAC 3 cut(s) 119, 1940, 2042
NsiI ATGCAT 5 cut(s) 142, 300, 393, 1173, 1364
NspI RCATGY 4 cut(s) 395, 704, 1069, 1426
PaeI GCATGC 3 cut(s) 395, 704, 1426
PagI TCATGA 3 cut(s) 831, 1684, 1692
PaqCI CACCTGC 1 cut(s) 1211
PceI AGGCCT 1 cut(s) 47
PciI ACATGT 1 cut(s) 1065
PcsI WCGNNNNNNNCGW 1 cut(s) 1132
PctI GAATGC 3 cut(s) 558, 609, 1150
PdmI GAANNNNTTC 1 cut(s) 1304
PfoI TCCNGGA 1 cut(s) 533
PkrI GCNGC 7 cut(s) 8, 699, 1096, 1468, 1510, 1579, 1891
PleI GAGTC 2 cut(s) 667, 1494
PpsI GAGTC 2 cut(s) 667, 1494
PscI ACATGT 1 cut(s) 1065
PshBI ATTAAT 1 cut(s) 240
PsiI TTATAA 1 cut(s) 287
Psp124BI GAGCTC 3 cut(s) 679, 897, 1200
Psp1406I AACGTT 1 cut(s) 1554
Psp6I CCWGG 2 cut(s) 533, 1648
PspFI CCCAGC 3 cut(s) 1277, 1385, 1604
PspGI CCWGG 2 cut(s) 533, 1648
PspN4I GGNNCC 8 cut(s) 979, 1338, 1434, 1456, 1533, 1636, 1897, 1997
PspPI GGNCC 2 cut(s) 537, 1996
PstI CTGCAG 1 cut(s) 1894
PsuI RGATCY 1 cut(s) 2027
RsaI GTAC 5 cut(s) 232, 877, 1320, 1885, 1897
RsaNI GTAC 5 cut(s) 231, 876, 1319, 1884, 1896
RseI CAYNNNNRTG 4 cut(s) 396, 705, 1176, 1427
SacI GAGCTC 3 cut(s) 679, 897, 1200
SaqAI TTAA 2 cut(s) 240, 597
SatI GCNGC 7 cut(s) 7, 698, 1095, 1467, 1509, 1578, 1890
Sau3AI GATC 7 cut(s) 144, 849, 985, 1152, 1413, 1752, 2027
Sau96I GGNCC 2 cut(s) 537, 1996
ScaI AGTACT 1 cut(s) 1885
SchI GAGTC 2 cut(s) 668, 1495
ScrFI CCNGG 3 cut(s) 535, 904, 1650
SduI GDGCHC 6 cut(s) 679, 897, 982, 1200, 1353, 1457
SexAI ACCWGGT 1 cut(s) 1648
SfaNI GCATC 4 cut(s) 285, 1081, 1349, 1589
SfcI CTRYAG 1 cut(s) 1890
SinI GGWCC 2 cut(s) 537, 1996
SmiMI CAYNNNNRTG 4 cut(s) 396, 705, 1176, 1427
SmlI CTYRAG 2 cut(s) 41, 1523
SmoI CTYRAG 2 cut(s) 41, 1523
SphI GCATGC 3 cut(s) 395, 704, 1426
Sse9I AATT 9 cut(s) 478, 683, 871, 1443, 1476, 1540, 1662, 1728, 1902
SseBI AGGCCT 1 cut(s) 47
SsiI CCGC 7 cut(s) 108, 540, 551, 1094, 1545, 1715, 1835
SspMI CTAG 5 cut(s) 188, 318, 1058, 1233, 1376
SstI GAGCTC 3 cut(s) 679, 897, 1200
StuI AGGCCT 1 cut(s) 47
StyD4I CCNGG 3 cut(s) 533, 902, 1648
StyI CCWWGG 2 cut(s) 88, 1863
TaaI ACNGT 4 cut(s) 1133, 1940, 1990, 2000
TaiI ACGT 1 cut(s) 1557
TaqI TCGA 5 cut(s) 657, 1126, 1135, 1308, 1395
TasI AATT 9 cut(s) 478, 683, 871, 1443, 1476, 1540, 1662, 1728, 1902
TatI WGTACW 2 cut(s) 875, 1883
TauI GCSGC 1 cut(s) 1097
Tru1I TTAA 2 cut(s) 240, 597
Tru9I TTAA 2 cut(s) 240, 597
TscAI CASTG 2 cut(s) 754, 1162
TseFI GTSAC 3 cut(s) 119, 1940, 2042
TseI GCWGC 6 cut(s) 6, 697, 1466, 1508, 1577, 1889
Tsp45I GTSAC 3 cut(s) 119, 1940, 2042
TspGWI ACGGA 1 cut(s) 1039
TspRI CASTG 2 cut(s) 754, 1162
VpaK11BI GGWCC 2 cut(s) 537, 1996
VspI ATTAAT 1 cut(s) 240
XapI RAATTY 3 cut(s) 478, 1476, 1728
XceI RCATGY 4 cut(s) 395, 704, 1069, 1426
XmnI GAANNNNTTC 1 cut(s) 1304
XspI CTAG 5 cut(s) 188, 318, 1058, 1233, 1376
ZrmI AGTACT 1 cut(s) 1885
Zsp2I ATGCAT 5 cut(s) 142, 300, 393, 1173, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.