Rmu_sc0002906.1_g000001

Zinc-binding dehydrogenase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002906.1
Physical Location & Seq
Reverse (-)
1 .. 773
773 bp
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UTR
Exon/CDS
Intron
Rmu_sc0002906.1_g000001.1.cds

Sequence Viewer

Length: 208 bp
atggcagcaaaacttatgcgtgcggttcagtacgacggttatggtggaggaccttccggtctaaagcatgttgaggttccgatcccaactccgaagaaagatgaggttttgctgaaattggaagcggctaccataaatccaattgattggaaagttcagaaaggcgtattccgcccttttattccaagaaagttcccttatatacctg

Protein Analysis

69

Amino Acids

7.72

Weight (kDa)

9.75

Isoelectric Point (pI)

17.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 57
AciI CCGC 3 cut(s) 23, 125, 172
AclWI GGATC 1 cut(s) 76
AfaI GTAC 1 cut(s) 32
AlwI GGATC 1 cut(s) 76
ApeKI GCWGC 1 cut(s) 5
AspS9I GGNCC 1 cut(s) 50
AvaII GGWCC 1 cut(s) 50
BbvI GCAGC 1 cut(s) 17
BisI GCNGC 2 cut(s) 6, 126
BlsI GCNGC 2 cut(s) 7, 127
Bme18I GGWCC 1 cut(s) 50
BmgT120I GGNCC 1 cut(s) 50
BmiI GGNNCC 1 cut(s) 78
BsaWI WCCGGW 1 cut(s) 56
BseXI GCAGC 1 cut(s) 17
BsiSI CCGG 1 cut(s) 57
Bsp143I GATC 1 cut(s) 81
BspACI CCGC 3 cut(s) 23, 125, 172
BspLI GGNNCC 1 cut(s) 78
BspPI GGATC 1 cut(s) 76
BssMI GATC 1 cut(s) 81
Bst4CI ACNGT 1 cut(s) 38
BstC8I GCNNGC 1 cut(s) 21
BstKTI GATC 1 cut(s) 84
BstMBI GATC 1 cut(s) 81
BstMWI GCNNNNNNNGC 1 cut(s) 171
BstNSI RCATGY 1 cut(s) 71
BstV1I GCAGC 1 cut(s) 17
BstXI CCANNNNNNTGG 1 cut(s) 147
Cac8I GCNNGC 1 cut(s) 21
Cfr13I GGNCC 1 cut(s) 50
Csp6I GTAC 1 cut(s) 31
CviAII CATG 1 cut(s) 68
CviJI RGCY 1 cut(s) 128
CviKI_1 RGCY 1 cut(s) 128
CviQI GTAC 1 cut(s) 31
DpnI GATC 1 cut(s) 83
DpnII GATC 1 cut(s) 81
DrdI GACNNNNNNGTC 1 cut(s) 57
DseDI GACNNNNNNGTC 1 cut(s) 57
EciI GGCGGA 1 cut(s) 161
Eco47I GGWCC 1 cut(s) 50
EcoO109I RGGNCCY 1 cut(s) 50
FaeI CATG 1 cut(s) 71
FaiI YATR 6 cut(s) 17, 42, 69, 134, 201, 203
FatI CATG 1 cut(s) 67
Fnu4HI GCNGC 2 cut(s) 6, 126
Fsp4HI GCNGC 2 cut(s) 6, 126
GluI GCNGC 2 cut(s) 6, 126
HapII CCGG 1 cut(s) 57
Hin1II CATG 1 cut(s) 71
HpaII CCGG 1 cut(s) 57
Hpy188I TCNGA 3 cut(s) 81, 93, 159
Hpy99I CGWCG 1 cut(s) 38
HpyAV CCTTC 1 cut(s) 63
HpyCH4III ACNGT 1 cut(s) 38
HpyF10VI GCNNNNNNNGC 1 cut(s) 171
Hsp92II CATG 1 cut(s) 71
Kzo9I GATC 1 cut(s) 81
LpnPI CCDG 1 cut(s) 70
Lsp1109I GCAGC 1 cut(s) 17
MalI GATC 1 cut(s) 83
MboI GATC 1 cut(s) 81
MboII GAAGA 1 cut(s) 106
MfeI CAATTG 1 cut(s) 141
MluCI AATT 2 cut(s) 116, 141
MnlI CCTC 3 cut(s) 41, 67, 97
MspI CCGG 1 cut(s) 57
MunI CAATTG 1 cut(s) 141
MwoI GCNNNNNNNGC 1 cut(s) 171
NdeII GATC 1 cut(s) 81
NlaIII CATG 1 cut(s) 71
NlaIV GGNNCC 1 cut(s) 78
NspI RCATGY 1 cut(s) 71
PkrI GCNGC 2 cut(s) 7, 127
PpuMI RGGWCCY 1 cut(s) 50
Psp5II RGGWCCY 1 cut(s) 50
PspN4I GGNNCC 1 cut(s) 78
PspPI GGNCC 1 cut(s) 50
PspPPI RGGWCCY 1 cut(s) 50
RsaI GTAC 1 cut(s) 32
RsaNI GTAC 1 cut(s) 31
SatI GCNGC 2 cut(s) 6, 126
Sau3AI GATC 1 cut(s) 81
Sau96I GGNCC 1 cut(s) 50
SetI ASST 4 cut(s) 55, 78, 108, 208
SgeI CNNG 4 cut(s) 32, 69, 80, 198
SinI GGWCC 1 cut(s) 50
Sse9I AATT 2 cut(s) 116, 141
SsiI CCGC 3 cut(s) 23, 125, 172
TaaI ACNGT 1 cut(s) 38
TasI AATT 2 cut(s) 116, 141
TauI GCSGC 1 cut(s) 128
TseI GCWGC 1 cut(s) 5
VpaK11BI GGWCC 1 cut(s) 50
XceI RCATGY 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.