Rmu_sc0003108.1_g000028

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003108.1
Physical Location & Seq
Forward (+)
107975 .. 111001
3027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003108.1_g000028.1.cds

Sequence Viewer

Length: 1782 bp
atgcctcaggatttgccgtcggaccaggaaacggacgatgccgaagctgagttcgttgaaattgatccctctggtcgttacggacggtataaagaggttttaggcaaaggggctttcaagaaagtatatagagcgtttgatgaattggaaggaattgaagtagcttggaaccaagttaaggtggcagatctattgcgcaactctgaagatttggagcgcctttattcggaagttcatttgctcaagactttgaagcacaagaacattattaagttttacaactcttgggttgataccaagcatgaaaatatcaacttcattacagagattttcacttcgggaaacttgaggcaataccggaggaaacataagcacgttgatttgagggcactaaaaaagtggtctaggcagatcttagaaggccttctgtatcttcaccggcatgaccccccagttattcaccgagatttgaagtgtgacaacatttttgtcaatgggaaccagggtgaggtgaaaattggtgacttaggactggctgctattcttcgccaggctcgttcagctcacagtgttattggtactcctgagtttatggcgccagagctttatgaagaggaatataatgagcttgttgacatttatgcctttggcatgtgcttattagagttggtgacctttgagtatccttatgttgagtgtactaatgctgctcagatattcaagaaagtgacatcaggaataaagccagcatcattgtcaaaagtgacagatcccggagtaaaagcatttatagaaaaatgcattgtgaaagtatctgatcgtttgcctgctgaggcacttttgatggatccttttcttcagtcagatggggatcgtgaaagtatatctcattctcttcaacccagagctcattatccagaaggcacttctgatcagaatgttggtgtggattctgaaatgagtagagacttcacggtacaaggccagaggaaagacgacacaatatttctgaaactacgaatagcagattctacaggtcactttcgaaatatccactttccatttgatattggtgaagacactgcaattgctgttgctagtgaaatggttcaagagttggatctgacagatcaagatgtttcaacaattgctgaacttattgactctgagattcaatcccacattccagattggatttctggagataatattgatgttgatgtgtcaacttcgaatagcccagtttctgactttaaggaagatgcttcttccccgataagtgaggtcagtaatctagcattagaaagattgccttcaggccgcaagtattggtccgactctcccaaggcaggtaatggaaactctccagtgaagcatggttattccaacttgcactctccagagggatcagacaatacaagaggcaccgatgacaatgataaatctcctggtagtcaagaaaaatctcctcgaaacgaagacgatccaaatggtgcagaaaactctggttcactgaattgcaatagtcttgatgcttctattgatctacataatagaaatggagctcatttatttgaaccagaagaagtcaagatcattgttgagaaacttgagaagctattggtgcaacagaaaaaggagctagatgaactcaaaaggaagcatgactcagagatatcagatgtcttgcatgaactacctccagctttctgtcaaaaggttttagataattgtaagttaaagatttcagactctagaatgcaccatgaggcacactgctaa

Protein Analysis

593

Amino Acids

66.86

Weight (kDa)

5.1

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012346)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 197
Acc36I ACCTGC 1 cut(s) 1340
AccB1I GGYRCC 2 cut(s) 595, 1424
AciI CCGC 1 cut(s) 1321
AclWI GGATC 8 cut(s) 59, 764, 842, 855, 879, 1128, 1414, 1478
AcuI CTGAAG 3 cut(s) 225, 842, 1299
AcyI GRCGYC 1 cut(s) 596
AfaI GTAC 3 cut(s) 580, 700, 978
AfiI CCNNNNNNNGG 5 cut(s) 31, 178, 226, 508, 1349
AjnI CCWGG 4 cut(s) 24, 501, 549, 1447
Alw21I GWGCWC 2 cut(s) 910, 1567
Alw26I GTCTC 1 cut(s) 960
AlwI GGATC 8 cut(s) 59, 764, 842, 855, 879, 1128, 1414, 1478
AlwNI CAGNNNCTG 1 cut(s) 1247
AoxI GGCC 3 cut(s) 421, 982, 1318
ApeKI GCWGC 2 cut(s) 536, 707
ArsI GACNNNNNNTTYG 2 cut(s) 470, 502
Asp700I GAANNNNTTC 2 cut(s) 423, 1107
AspLEI GCGC 3 cut(s) 198, 219, 598
AspS9I GGNCC 2 cut(s) 22, 1332
AsuC2I CCSGG 1 cut(s) 774
AsuHPI GGTGA 7 cut(s) 428, 452, 518, 523, 533, 682, 1085
AsuII TTCGAA 2 cut(s) 1045, 1232
AvaII GGWCC 2 cut(s) 22, 1332
AxyI CCTNAGG 1 cut(s) 6
BaeGI GKGCMC 1 cut(s) 391
BamHI GGATCC 1 cut(s) 847
BanI GGYRCC 2 cut(s) 595, 1424
BanII GRGCYC 2 cut(s) 910, 1567
BbsI GAAGAC 2 cut(s) 1083, 1485
Bbv12I GWGCWC 2 cut(s) 910, 1567
BbvCI CCTCAGC 1 cut(s) 831
BbvI GCAGC 2 cut(s) 523, 694
BccI CCATC 2 cut(s) 838, 860
BciT130I CCWGG 4 cut(s) 26, 503, 551, 1449
BciVI GTATCC 1 cut(s) 693
BclI TGATCA 1 cut(s) 931
BcnI CCSGG 1 cut(s) 774
BcoDI GTCTC 1 cut(s) 960
BfaI CTAG 5 cut(s) 405, 1098, 1295, 1643, 1755
BfmI CTRYAG 1 cut(s) 1032
BfoI RGCGCY 2 cut(s) 220, 599
BfuAI ACCTGC 1 cut(s) 1340
BfuI GTATCC 1 cut(s) 693
BglII AGATCT 2 cut(s) 187, 411
BisI GCNGC 3 cut(s) 537, 708, 1321
BlsI GCNGC 3 cut(s) 538, 709, 1322
Bme1390I CCNGG 5 cut(s) 26, 503, 551, 774, 1449
Bme18I GGWCC 2 cut(s) 22, 1332
BmgT120I GGNCC 2 cut(s) 22, 1332
BmiI GGNNCC 5 cut(s) 170, 500, 597, 849, 1426
BmrFI CCNGG 5 cut(s) 26, 503, 551, 774, 1449
BmrI ACTGGG 2 cut(s) 446, 1235
BmsI GCATC 4 cut(s) 28, 758, 1252, 1522
BmuI ACTGGG 2 cut(s) 446, 1235
BpiI GAAGAC 2 cut(s) 1083, 1485
BpmI CTGGAG 4 cut(s) 1221, 1350, 1383, 1686
Bpu10I CCTNAGC 1 cut(s) 831
Bpu14I TTCGAA 2 cut(s) 1045, 1232
BpuEI CTTGAG 3 cut(s) 227, 367, 1631
BpuMI CCSGG 1 cut(s) 774
BsaBI GATNNNNATC 1 cut(s) 870
BsaHI GRCGYC 1 cut(s) 596
BsaJI CCNNGG 2 cut(s) 502, 1344
BsaWI WCCGGW 1 cut(s) 357
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 178, 226, 508, 1349
Bse118I RCCGGY 1 cut(s) 438
Bse1I ACTGG 4 cut(s) 452, 537, 1241, 1367
Bse21I CCTNAGG 1 cut(s) 6
Bse8I GATNNNNATC 1 cut(s) 870
BseBI CCWGG 4 cut(s) 26, 503, 551, 1449
BseDI CCNNGG 2 cut(s) 502, 1344
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 5 cut(s) 31, 178, 226, 508, 1349
BseMII CTCAG 7 cut(s) 20, 39, 576, 725, 822, 1158, 1683
BseNI ACTGG 4 cut(s) 452, 537, 1241, 1367
BseRI GAGGAG 1 cut(s) 1458
BseSI GKGCMC 1 cut(s) 391
BseXI GCAGC 2 cut(s) 523, 694
BsgI GTGCAG 1 cut(s) 1515
BshFI GGCC 3 cut(s) 423, 984, 1320
BshNI GGYRCC 2 cut(s) 595, 1424
BsiHKAI GWGCWC 2 cut(s) 910, 1567
BsiSI CCGG 3 cut(s) 358, 439, 774
BslI CCNNNNNNNGG 5 cut(s) 31, 178, 226, 508, 1349
BsmAI GTCTC 1 cut(s) 960
BsmI GAATGC 1 cut(s) 1764
BsnI GGCC 3 cut(s) 423, 984, 1320
Bsp119I TTCGAA 2 cut(s) 1045, 1232
Bsp1286I GDGCHC 3 cut(s) 391, 910, 1567
BspACI CCGC 1 cut(s) 1321
BspANI GGCC 3 cut(s) 423, 984, 1320
BspCNI CTCAG 7 cut(s) 19, 40, 577, 724, 823, 1159, 1682
BspLI GGNNCC 5 cut(s) 170, 500, 597, 849, 1426
BspMI ACCTGC 1 cut(s) 1340
BspPI GGATC 8 cut(s) 59, 764, 842, 855, 879, 1128, 1414, 1478
BspT104I TTCGAA 2 cut(s) 1045, 1232
BspT107I GGYRCC 2 cut(s) 595, 1424
BsrFI RCCGGY 1 cut(s) 438
BsrI ACTGG 4 cut(s) 452, 537, 1241, 1367
BssAI RCCGGY 1 cut(s) 438
BssECI CCNNGG 2 cut(s) 502, 1344
BssNI GRCGYC 1 cut(s) 596
BssT1I CCWWGG 1 cut(s) 1344
Bst2UI CCWGG 4 cut(s) 26, 503, 551, 1449
Bst4CI ACNGT 3 cut(s) 87, 569, 976
Bst6I CTCTTC 2 cut(s) 606, 900
BstACI GRCGYC 1 cut(s) 596
BstBI TTCGAA 2 cut(s) 1045, 1232
BstC8I GCNNGC 2 cut(s) 747, 828
BstDEI CTNAG 9 cut(s) 6, 48, 415, 526, 585, 711, 831, 1167, 1669
BstEII GGTNACC 1 cut(s) 670
BstH2I RGCGCY 2 cut(s) 220, 599
BstHHI GCGC 3 cut(s) 198, 219, 598
BstMAI GTCTC 1 cut(s) 960
BstMWI GCNNNNNNNGC 2 cut(s) 560, 1624
BstNI CCWGG 4 cut(s) 26, 503, 551, 1449
BstNSI RCATGY 1 cut(s) 655
BstPI GGTNACC 1 cut(s) 670
BstSCI CCNGG 5 cut(s) 24, 501, 549, 772, 1447
BstSFI CTRYAG 1 cut(s) 1032
BstSLI GKGCMC 1 cut(s) 391
BstV1I GCAGC 2 cut(s) 523, 694
BstV2I GAAGAC 2 cut(s) 1083, 1485
BstX2I RGATCY 5 cut(s) 187, 411, 769, 847, 1120
BstYI RGATCY 5 cut(s) 187, 411, 769, 847, 1120
Bsu36I CCTNAGG 1 cut(s) 6
BsuI GTATCC 1 cut(s) 693
BsuRI GGCC 3 cut(s) 423, 984, 1320
BtsI GCAGTG 2 cut(s) 1080, 1774
BtsIMutI CAGTG 5 cut(s) 574, 1080, 1374, 1511, 1774
BveI ACCTGC 1 cut(s) 1340
Cac8I GCNNGC 2 cut(s) 747, 828
CaiI CAGNNNCTG 1 cut(s) 1247
CfoI GCGC 3 cut(s) 198, 219, 598
Cfr10I RCCGGY 1 cut(s) 438
Cfr13I GGNCC 2 cut(s) 22, 1332
Csp6I GTAC 3 cut(s) 579, 699, 977
CviAII CATG 7 cut(s) 302, 443, 652, 1376, 1664, 1691, 1766
CviQI GTAC 3 cut(s) 579, 699, 977
DdeI CTNAG 9 cut(s) 6, 48, 415, 526, 585, 711, 831, 1167, 1669
DinI GGCGCC 1 cut(s) 597
Eam1104I CTCTTC 2 cut(s) 606, 900
EarI CTCTTC 2 cut(s) 606, 900
Ecl136II GAGCTC 2 cut(s) 908, 1565
Eco130I CCWWGG 1 cut(s) 1344
Eco147I AGGCCT 1 cut(s) 423
Eco24I GRGCYC 2 cut(s) 910, 1567
Eco32I GATATC 1 cut(s) 1677
Eco47I GGWCC 2 cut(s) 22, 1332
Eco53kI GAGCTC 2 cut(s) 908, 1565
Eco57I CTGAAG 3 cut(s) 225, 842, 1299
Eco81I CCTNAGG 1 cut(s) 6
Eco91I GGTNACC 1 cut(s) 670
EcoICRI GAGCTC 2 cut(s) 908, 1565
EcoO65I GGTNACC 1 cut(s) 670
EcoRII CCWGG 4 cut(s) 24, 501, 549, 1447
EcoRV GATATC 1 cut(s) 1677
EcoT14I CCWWGG 1 cut(s) 1344
EcoT22I ATGCAT 1 cut(s) 803
EcoT38I GRGCYC 2 cut(s) 910, 1567
EgeI GGCGCC 1 cut(s) 597
EheI GGCGCC 1 cut(s) 597
ErhI CCWWGG 1 cut(s) 1344
FaeI CATG 7 cut(s) 305, 446, 655, 1379, 1667, 1694, 1769
FalI AAGNNNNNCTT 2 cut(s) 1297, 1329
FatI CATG 7 cut(s) 301, 442, 651, 1375, 1663, 1690, 1765
FbaI TGATCA 1 cut(s) 931
Fnu4HI GCNGC 3 cut(s) 537, 708, 1321
FriOI GRGCYC 2 cut(s) 910, 1567
Fsp4HI GCNGC 3 cut(s) 537, 708, 1321
FspBI CTAG 5 cut(s) 405, 1098, 1295, 1643, 1755
FspI TGCGCA 1 cut(s) 197
GlaI GCGC 3 cut(s) 197, 218, 597
GluI GCNGC 3 cut(s) 537, 708, 1321
GsuI CTGGAG 4 cut(s) 1221, 1350, 1383, 1686
HaeII RGCGCY 2 cut(s) 220, 599
HaeIII GGCC 3 cut(s) 423, 984, 1320
HapII CCGG 3 cut(s) 358, 439, 774
HhaI GCGC 3 cut(s) 198, 219, 598
Hin1I GRCGYC 1 cut(s) 596
Hin1II CATG 7 cut(s) 305, 446, 655, 1379, 1667, 1694, 1769
Hin6I GCGC 3 cut(s) 196, 217, 596
HinP1I GCGC 3 cut(s) 196, 217, 596
HincII GTYRAC 2 cut(s) 634, 1227
HindII GTYRAC 2 cut(s) 634, 1227
HinfI GANTC 7 cut(s) 950, 1028, 1163, 1171, 1337, 1667, 1751
HpaII CCGG 3 cut(s) 358, 439, 774
HphI GGTGA 7 cut(s) 428, 452, 518, 523, 533, 682, 1085
Hpy166II GTNNAC 4 cut(s) 634, 699, 1227, 1511
Hpy8I GTNNAC 4 cut(s) 634, 699, 1227, 1511
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 5 cut(s) 143, 413, 434, 914, 1323
HpyCH4III ACNGT 3 cut(s) 87, 569, 976
HpyCH4IV ACGT 1 cut(s) 375
HpyCH4V TGCA 8 cut(s) 801, 1085, 1393, 1496, 1521, 1627, 1690, 1762
HpyF10VI GCNNNNNNNGC 2 cut(s) 560, 1624
HpyF3I CTNAG 9 cut(s) 6, 48, 415, 526, 585, 711, 831, 1167, 1669
HpySE526I ACGT 1 cut(s) 375
Hsp92I GRCGYC 1 cut(s) 596
Hsp92II CATG 7 cut(s) 305, 446, 655, 1379, 1667, 1694, 1769
HspAI GCGC 3 cut(s) 196, 217, 596
KasI GGCGCC 1 cut(s) 595
Ksp22I TGATCA 1 cut(s) 931
LmnI GCTCC 3 cut(s) 214, 1562, 1639
Lsp1109I GCAGC 2 cut(s) 523, 694
LweI GCATC 4 cut(s) 28, 758, 1252, 1522
MaeI CTAG 5 cut(s) 405, 1098, 1295, 1643, 1755
MaeII ACGT 1 cut(s) 375
MaeIII GTNAC 7 cut(s) 77, 476, 521, 670, 727, 763, 1037
MfeI CAATTG 2 cut(s) 1086, 1146
MflI RGATCY 5 cut(s) 187, 411, 769, 847, 1120
MhlI GDGCHC 3 cut(s) 391, 910, 1567
MluCI AATT 8 cut(s) 60, 143, 153, 516, 1086, 1146, 1516, 1729
Mly113I GGCGCC 1 cut(s) 596
MlyI GAGTC 4 cut(s) 1157, 1331, 1661, 1745
MmeI TCCRAC 3 cut(s) 1098, 1359, 1410
Mph1103I ATGCAT 1 cut(s) 803
MroXI GAANNNNTTC 2 cut(s) 423, 1107
MseI TTAA 4 cut(s) 177, 270, 1254, 1739
MslI CAYNNNNRTG 1 cut(s) 441
MspI CCGG 3 cut(s) 358, 439, 774
MspR9I CCNGG 5 cut(s) 26, 503, 551, 774, 1449
MunI CAATTG 2 cut(s) 1086, 1146
Mva1269I GAATGC 1 cut(s) 1764
MvaI CCWGG 4 cut(s) 26, 503, 551, 1449
MwoI GCNNNNNNNGC 2 cut(s) 560, 1624
NarI GGCGCC 1 cut(s) 596
NciI CCSGG 1 cut(s) 774
NlaIII CATG 7 cut(s) 305, 446, 655, 1379, 1667, 1694, 1769
NlaIV GGNNCC 5 cut(s) 170, 500, 597, 849, 1426
NmuCI GTSAC 6 cut(s) 476, 521, 670, 727, 763, 1037
NsbI TGCGCA 1 cut(s) 197
NsiI ATGCAT 1 cut(s) 803
NspI RCATGY 1 cut(s) 655
NspV TTCGAA 2 cut(s) 1045, 1232
PceI AGGCCT 1 cut(s) 423
PcsI WCGNNNNNNNCGW 1 cut(s) 553
PctI GAATGC 1 cut(s) 1764
PdmI GAANNNNTTC 2 cut(s) 423, 1107
PfeI GAWTC 3 cut(s) 950, 1028, 1171
PfoI TCCNGGA 1 cut(s) 772
PkrI GCNGC 3 cut(s) 538, 709, 1322
PleI GAGTC 4 cut(s) 1157, 1331, 1661, 1745
PluTI GGCGCC 1 cut(s) 599
PpsI GAGTC 4 cut(s) 1157, 1331, 1661, 1745
Psp124BI GAGCTC 2 cut(s) 910, 1567
Psp6I CCWGG 4 cut(s) 24, 501, 549, 1447
PspEI GGTNACC 1 cut(s) 670
PspGI CCWGG 4 cut(s) 24, 501, 549, 1447
PspN4I GGNNCC 5 cut(s) 170, 500, 597, 849, 1426
PspPI GGNCC 2 cut(s) 22, 1332
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 5 cut(s) 187, 411, 769, 847, 1120
RsaI GTAC 3 cut(s) 580, 700, 978
RsaNI GTAC 3 cut(s) 579, 699, 977
RseI CAYNNNNRTG 1 cut(s) 441
SacI GAGCTC 2 cut(s) 910, 1567
SaqAI TTAA 4 cut(s) 177, 270, 1254, 1739
SatI GCNGC 3 cut(s) 537, 708, 1321
Sau96I GGNCC 2 cut(s) 22, 1332
SchI GAGTC 4 cut(s) 1157, 1331, 1661, 1745
ScrFI CCNGG 5 cut(s) 26, 503, 551, 774, 1449
SduI GDGCHC 3 cut(s) 391, 910, 1567
SfaNI GCATC 4 cut(s) 28, 758, 1252, 1522
SfcI CTRYAG 1 cut(s) 1032
SfoI GGCGCC 1 cut(s) 597
SfuI TTCGAA 2 cut(s) 1045, 1232
SinI GGWCC 2 cut(s) 22, 1332
SmiMI CAYNNNNRTG 1 cut(s) 441
SmlI CTYRAG 3 cut(s) 242, 346, 1610
SmoI CTYRAG 3 cut(s) 242, 346, 1610
Sse9I AATT 8 cut(s) 60, 143, 153, 516, 1086, 1146, 1516, 1729
SseBI AGGCCT 1 cut(s) 423
SsiI CCGC 1 cut(s) 1321
SspDI GGCGCC 1 cut(s) 595
SspI AATATT 2 cut(s) 1005, 1210
SspMI CTAG 5 cut(s) 405, 1098, 1295, 1643, 1755
SstI GAGCTC 2 cut(s) 910, 1567
StuI AGGCCT 1 cut(s) 423
StyD4I CCNGG 5 cut(s) 24, 501, 549, 772, 1447
StyI CCWWGG 1 cut(s) 1344
TaaI ACNGT 3 cut(s) 87, 569, 976
TaiI ACGT 1 cut(s) 378
TaqI TCGA 3 cut(s) 1045, 1232, 1471
TasI AATT 8 cut(s) 60, 143, 153, 516, 1086, 1146, 1516, 1729
TatI WGTACW 1 cut(s) 698
TauI GCSGC 1 cut(s) 1323
TfiI GAWTC 3 cut(s) 950, 1028, 1171
Tru1I TTAA 4 cut(s) 177, 270, 1254, 1739
Tru9I TTAA 4 cut(s) 177, 270, 1254, 1739
TscAI CASTG 5 cut(s) 574, 1087, 1374, 1518, 1781
TseFI GTSAC 6 cut(s) 476, 521, 670, 727, 763, 1037
TseI GCWGC 2 cut(s) 536, 707
Tsp45I GTSAC 6 cut(s) 476, 521, 670, 727, 763, 1037
TspDTI ATGAA 7 cut(s) 156, 224, 307, 318, 624, 1662, 1707
TspGWI ACGGA 2 cut(s) 47, 96
TspRI CASTG 5 cut(s) 574, 1087, 1374, 1518, 1781
VpaK11BI GGWCC 2 cut(s) 22, 1332
XbaI TCTAGA 1 cut(s) 1754
XceI RCATGY 1 cut(s) 655
XmnI GAANNNNTTC 2 cut(s) 423, 1107
XspI CTAG 5 cut(s) 405, 1098, 1295, 1643, 1755
Zsp2I ATGCAT 1 cut(s) 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.