Rmu_sc0003306.1_g000004

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003306.1
OG0008659
Physical Location & Seq
Reverse (-)
10031 .. 15983
5953 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2463 bp
atgcctcctgctaggaaggtttctgagtttttcagagaaggcaatgactggttttgcaaagccggattgccgagtgatattactgttgtggtggacggtgtaaggttccatcttcataagtttcctctcatatcaaaatgtgggaagatagcacgtttatatgaagagtccgaaaggaaacatgagaagattttcactacagttcttgaggaattccctggtggccctgacatgttcctgatcgcagctaaattctgctatggtacgcgggtggaattgacttcaagaaacatagtaatggtgtactgtgcagcggactaccttgaaatgatagatgagtttggagaagaaaacttactctcaaagtcggagagttttttctataagaatatacttcacaactggaaagactgtatcttggctcttcaaagttctgagcctgttctccaaagggcagaaaaacttcacataataaacaaatgtgtaaatgctttatcggtgatggtttgtactgatcctagtttatttgggtggcccatgatgatgtatggtagcttacagagtcctggtggaagcatcctatggaatggaattaatactggagcaaggattagaagctctgagtctgattggtggtttgaagacatctcatacctcagtgtgagtttgtttgagagactcatcaaggcaatggaaacaaagggtataagacccgaaaacattgtaggtgctgtaatgcactataccagaaaatacctacctggcctgggcagatcgcagggtggacaacatagtatacccaggacagttacaagttttagttttacacccattgcccttgatcaaagggtagttttagaaagcattgagaaacttcttccccaaaagaagggtaaatcattttgccggtttttgctcggacttcttcgtgttgcattaatattgggagccagtcaaacctgcaaggactctttagagaagagaataggcaggcaactggaatttgcaactttagatggtcttctgattcctacttattcagatgctgagacattgtatgatattgagactgttcaacggataatccaacatttcatgtcatcagaatcgaaggttacaccattttctccagcatcagttgaaccggaaacatctccatcatcgggaccattaaggttagtggcaaagctgatagatagctacattgcggaggttgcttcagatgttgctttaaagcctggaaagatacgctctcttgcagaggctcttccagattcttcaagaactttgcatgatgggctgtatcggtcacttgatatatacttcaaggcgcatccttggctcacagataaggagaaggaagaactttgcaacatcattgacttccagaaactctctattgatgcatgtgcccatgcatcccaaaatgaaaggttaccgcttagagttgttcttcaagtcctgttctttgagcagatgcatttgagaactgctctagctggtcatctgaatgtcttggaaacagaaagtgcccctacaggtcctgttaatgtccaagctgagatggctggccagattatacagagggatgggtgggtgactatggtgcgtgagaaccgggttttaaaggtggatatggacaagatgagatctagagttggtgagcttgaacaagaatttagtaaaataaagcaagagatgaaaaaggtgtccaaatcacatagttccctcagttcgcctcgtgtggttgccaggagaattgggtgcaatcttctttcacgaccttcagatgataaaccagtgaccattggaagtaccgggccctccccaagagcatcagttgagcaggcacaggttctggttggtcctcagaaaatatctgaaaaaggaagggaaattctaaaattgacatcatcatcgagatcttttgaatgttttgagcttccttcacgtttctgtgaaccaaccagaattgtacggcagtgtctggatggaggacgctggagccgagtcaccgttaccactggacctccatctccgactggaaagcgacctagagacgaactggaagacgacgacaatcatgaagacgaagagagctgcggccgagattcggtgctcgagactcgatatgtacctacagcttcttcttcctcatcgcggatttcgttctcatttcccgctcccaaaatcctaacgctgacgacactcttgagcttaagaaaagccgttgcgtctgcttcttcagtgtcgcgaggagcagatgctggagtggaggccaaagattgcatcaagatcaaggatatggcattgaaggcttcggtagcctacaaaaactgcaagcggtgttcgaggctgtgcggcgaacatcggaatcggaactgttcggattttgatatgtcgtcgaagttccactgctcgtaccagaggactgggagctcgaattcgacgctgaggcaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

820

Amino Acids

91.76

Weight (kDa)

8.61

Isoelectric Point (pI)

52.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 210 - 470 9.7e-89 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 968
AccBSI CCGCTC 1 cut(s) 2183
AccI GTMKAC 1 cut(s) 796
AccII CGCG 3 cut(s) 268, 2161, 2254
AciI CCGC 9 cut(s) 268, 314, 1208, 1439, 2103, 2161, 2181, 2344, 2361
AclWI GGATC 1 cut(s) 509
AcoI YGGCCR 2 cut(s) 1570, 2104
AcsI RAATTY 6 cut(s) 212, 251, 1001, 1676, 1896, 2443
AcuI CTGAAG 3 cut(s) 1203, 1770, 2229
AfaI GTAC 7 cut(s) 265, 305, 511, 1816, 1977, 2136, 2423
AfiI CCNNNNNNNGG 5 cut(s) 767, 889, 1163, 2113, 2160
AflII CTTAAG 1 cut(s) 2218
AflIII ACRYGT 1 cut(s) 231
AjnI CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
Alw21I GWGCWC 2 cut(s) 2121, 2441
Alw26I GTCTC 5 cut(s) 670, 1043, 1061, 2052, 2117
AlwI GGATC 1 cut(s) 509
AlwNI CAGNNNCTG 5 cut(s) 1046, 1544, 1858, 1987, 2267
Ama87I CYCGRG 1 cut(s) 2120
AoxI GGCC 7 cut(s) 223, 533, 763, 1570, 1820, 2104, 2277
ApaI GGGCCC 1 cut(s) 1824
ApeKI GCWGC 3 cut(s) 245, 311, 2100
ApoI RAATTY 6 cut(s) 212, 251, 1001, 1676, 1896, 2443
AseI ATTAAT 2 cut(s) 594, 938
Asp700I GAANNNNTTC 2 cut(s) 191, 462
AspLEI GCGC 1 cut(s) 1333
AspS9I GGNCC 8 cut(s) 224, 534, 1166, 1541, 1820, 1821, 1865, 2027
AsuC2I CCSGG 2 cut(s) 1619, 1819
AsuHPI GGTGA 4 cut(s) 511, 1609, 1673, 2005
AvaI CYCGRG 1 cut(s) 2120
AvaII GGWCC 4 cut(s) 1166, 1541, 1865, 2027
BaeGI GKGCMC 3 cut(s) 1414, 1534, 1824
BaeI ACNNNNGTAYC 2 cut(s) 255, 288
BalI TGGCCA 1 cut(s) 1572
BanII GRGCYC 2 cut(s) 1824, 2441
BarI GAAGNNNNNNTAC 2 cut(s) 339, 371
BauI CACGAG 1 cut(s) 1740
BbsI GAAGAC 4 cut(s) 648, 1013, 2076, 2094
Bbv12I GWGCWC 2 cut(s) 2121, 2441
BbvCI CCTCAGC 1 cut(s) 2453
BbvI GCAGC 3 cut(s) 257, 323, 2087
BccI CCATC 9 cut(s) 117, 496, 1010, 1165, 1289, 1558, 1583, 1985, 2041
BceAI ACGGC 2 cut(s) 1994, 2213
BciT130I CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
BclI TGATCA 1 cut(s) 841
BcnI CCSGG 2 cut(s) 1619, 1819
BcoDI GTCTC 5 cut(s) 670, 1043, 1061, 2052, 2117
BfaI CTAG 5 cut(s) 12, 519, 1496, 1653, 2055
BfmI CTRYAG 3 cut(s) 198, 1536, 2139
BfrI CTTAAG 1 cut(s) 2218
BfuAI ACCTGC 1 cut(s) 968
BglII AGATCT 2 cut(s) 1649, 1922
BisI GCNGC 5 cut(s) 246, 312, 2101, 2104, 2362
BlsI GCNGC 5 cut(s) 247, 313, 2102, 2105, 2363
Bme1390I CCNGG 9 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753, 1819
Bme18I GGWCC 4 cut(s) 1166, 1541, 1865, 2027
BmeT110I CYCGRG 1 cut(s) 2120
BmgT120I GGNCC 8 cut(s) 224, 534, 1166, 1541, 1820, 1821, 1865, 2027
BmiI GGNNCC 5 cut(s) 107, 949, 1167, 1822, 2006
BmrFI CCNGG 9 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753, 1819
BmrI ACTGGG 1 cut(s) 2442
BmuI ACTGGG 1 cut(s) 2442
BpiI GAAGAC 4 cut(s) 648, 1013, 2076, 2094
BplI GAGNNNNNCTC 2 cut(s) 1477, 1509
BpmI CTGGAG 4 cut(s) 621, 1113, 2023, 2289
Bpu10I CCTNAGC 1 cut(s) 2453
BpuEI CTTGAG 2 cut(s) 227, 2233
BpuMI CCSGG 2 cut(s) 1619, 1819
BsaJI CCNNGG 4 cut(s) 217, 766, 800, 1337
BsaWI WCCGGW 1 cut(s) 1144
BsaXI ACNNNNNCTCC 2 cut(s) 2014, 2044
Bsc4I CCNNNNNNNGG 5 cut(s) 767, 889, 1163, 2113, 2160
Bse118I RCCGGY 1 cut(s) 906
Bse3DI GCAATG 4 cut(s) 49, 696, 831, 1203
BseBI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
BseDI CCNNGG 4 cut(s) 217, 766, 800, 1337
BseGI GGATG 5 cut(s) 576, 1333, 1418, 1594, 1996
BseLI CCNNNNNNNGG 5 cut(s) 767, 889, 1163, 2113, 2160
BseMI GCAATG 4 cut(s) 49, 696, 831, 1203
BseMII CTCAG 9 cut(s) 15, 426, 612, 670, 1038, 1551, 1744, 1883, 2444
BseRI GAGGAG 1 cut(s) 2271
BseSI GKGCMC 3 cut(s) 1414, 1534, 1824
BseX3I CGGCCG 1 cut(s) 2104
BseXI GCAGC 3 cut(s) 257, 323, 2087
BsgI GTGCAG 1 cut(s) 330
Bsh1236I CGCG 3 cut(s) 268, 2161, 2254
Bsh1285I CGRYCG 1 cut(s) 2107
BshFI GGCC 7 cut(s) 225, 535, 765, 1572, 1822, 2106, 2279
BsiEI CGRYCG 1 cut(s) 2107
BsiHKAI GWGCWC 2 cut(s) 2121, 2441
BsiHKCI CYCGRG 1 cut(s) 2120
BsiSI CCGG 5 cut(s) 63, 907, 1145, 1618, 1818
BslFI GGGAC 1 cut(s) 1179
BslI CCNNNNNNNGG 5 cut(s) 767, 889, 1163, 2113, 2160
BsmAI GTCTC 5 cut(s) 670, 1043, 1061, 2052, 2117
BsmBI CGTCTC 1 cut(s) 2052
BsmFI GGGAC 1 cut(s) 1179
BsnI GGCC 7 cut(s) 225, 535, 765, 1572, 1822, 2106, 2279
BsoBI CYCGRG 1 cut(s) 2120
Bsp120I GGGCCC 1 cut(s) 1820
Bsp1286I GDGCHC 5 cut(s) 1414, 1534, 1824, 2121, 2441
Bsp143I GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
Bsp68I TCGCGA 1 cut(s) 2254
BspACI CCGC 9 cut(s) 268, 314, 1208, 1439, 2103, 2161, 2181, 2344, 2361
BspANI GGCC 7 cut(s) 225, 535, 765, 1572, 1822, 2106, 2279
BspCNI CTCAG 9 cut(s) 16, 427, 613, 669, 1039, 1552, 1743, 1882, 2445
BspFNI CGCG 3 cut(s) 268, 2161, 2254
BspHI TCATGA 1 cut(s) 2083
BspLI GGNNCC 5 cut(s) 107, 949, 1167, 1822, 2006
BspMI ACCTGC 1 cut(s) 968
BspPI GGATC 1 cut(s) 509
BspQI GCTCTTC 2 cut(s) 429, 1272
BspTI CTTAAG 1 cut(s) 2218
BsrBI CCGCTC 1 cut(s) 2183
BsrDI GCAATG 4 cut(s) 49, 696, 831, 1203
BsrFI RCCGGY 1 cut(s) 906
BssAI RCCGGY 1 cut(s) 906
BssECI CCNNGG 4 cut(s) 217, 766, 800, 1337
BssMI GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
BssNAI GTATAC 1 cut(s) 797
BssSI CACGAG 1 cut(s) 1740
BssT1I CCWWGG 1 cut(s) 1337
Bst1107I GTATAC 1 cut(s) 797
Bst2BI CACGAG 1 cut(s) 1740
Bst2UI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
Bst4CI ACNGT 9 cut(s) 85, 98, 202, 308, 413, 808, 1072, 2017, 2384
Bst6I CTCTTC 5 cut(s) 159, 429, 974, 1272, 2088
BstAFI CTTAAG 1 cut(s) 2218
BstC8I GCNNGC 4 cut(s) 992, 1570, 1848, 2342
BstEII GGTNACC 1 cut(s) 1434
BstF5I GGATG 5 cut(s) 576, 1333, 1418, 1594, 1996
BstFNI CGCG 3 cut(s) 268, 2161, 2254
BstHHI GCGC 1 cut(s) 1333
BstKTI GATC 7 cut(s) 243, 517, 776, 844, 1652, 1925, 2298
BstMAI GTCTC 5 cut(s) 670, 1043, 1061, 2052, 2117
BstMBI GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
BstMCI CGRYCG 1 cut(s) 2107
BstMWI GCNNNNNNNGC 6 cut(s) 1214, 1297, 1339, 1565, 2315, 2324
BstNI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
BstNSI RCATGY 2 cut(s) 235, 1410
BstPI GGTNACC 1 cut(s) 1434
BstSCI CCNGG 9 cut(s) 217, 565, 760, 765, 800, 1237, 1617, 1751, 1817
BstSFI CTRYAG 3 cut(s) 198, 1536, 2139
BstSLI GKGCMC 3 cut(s) 1414, 1534, 1824
BstUI CGCG 3 cut(s) 268, 2161, 2254
BstV1I GCAGC 3 cut(s) 257, 323, 2087
BstV2I GAAGAC 4 cut(s) 648, 1013, 2076, 2094
BstX2I RGATCY 2 cut(s) 1649, 1922
BstXI CCANNNNNNTGG 1 cut(s) 2432
BstYI RGATCY 2 cut(s) 1649, 1922
BstZ17I GTATAC 1 cut(s) 797
BstZI CGGCCG 1 cut(s) 2104
BsuRI GGCC 7 cut(s) 225, 535, 765, 1572, 1822, 2106, 2279
BtgZI GCGATG 1 cut(s) 2142
BtsCI GGATG 5 cut(s) 576, 1333, 1418, 1594, 1996
BtsI GCAGTG 2 cut(s) 1988, 2413
BtsIMutI CAGTG 6 cut(s) 664, 1806, 1988, 2022, 2253, 2413
BtuMI TCGCGA 1 cut(s) 2254
BveI ACCTGC 1 cut(s) 968
Cac8I GCNNGC 4 cut(s) 992, 1570, 1848, 2342
CaiI CAGNNNCTG 5 cut(s) 1046, 1544, 1858, 1987, 2267
CciI TCATGA 1 cut(s) 2083
CfoI GCGC 1 cut(s) 1333
Cfr10I RCCGGY 1 cut(s) 906
Cfr13I GGNCC 8 cut(s) 224, 534, 1166, 1541, 1820, 1821, 1865, 2027
CseI GACGC 3 cut(s) 2007, 2223, 2458
Csp6I GTAC 7 cut(s) 264, 304, 510, 1815, 1976, 2135, 2422
CviAII CATG 8 cut(s) 182, 232, 538, 1096, 1292, 1407, 1415, 2084
CviQI GTAC 7 cut(s) 264, 304, 510, 1815, 1976, 2135, 2422
DpnI GATC 7 cut(s) 242, 516, 775, 843, 1651, 1924, 2297
DpnII GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
DraI TTTAAA 2 cut(s) 1233, 1626
EaeI YGGCCR 2 cut(s) 1570, 2104
EagI CGGCCG 1 cut(s) 2104
Eam1104I CTCTTC 5 cut(s) 159, 429, 974, 1272, 2088
EarI CTCTTC 5 cut(s) 159, 429, 974, 1272, 2088
Ecl136II GAGCTC 1 cut(s) 2439
EclXI CGGCCG 1 cut(s) 2104
Eco130I CCWWGG 1 cut(s) 1337
Eco24I GRGCYC 2 cut(s) 1824, 2441
Eco47I GGWCC 4 cut(s) 1166, 1541, 1865, 2027
Eco52I CGGCCG 1 cut(s) 2104
Eco53kI GAGCTC 1 cut(s) 2439
Eco57I CTGAAG 3 cut(s) 1203, 1770, 2229
Eco88I CYCGRG 1 cut(s) 2120
Eco91I GGTNACC 1 cut(s) 1434
EcoICRI GAGCTC 1 cut(s) 2439
EcoO109I RGGNCCY 2 cut(s) 1541, 1821
EcoO65I GGTNACC 1 cut(s) 1434
EcoRI GAATTC 2 cut(s) 212, 2443
EcoRII CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
EcoT14I CCWWGG 1 cut(s) 1337
EcoT22I ATGCAT 3 cut(s) 1408, 1420, 1482
EcoT38I GRGCYC 2 cut(s) 1824, 2441
ErhI CCWWGG 1 cut(s) 1337
Esp3I CGTCTC 1 cut(s) 2052
FaeI CATG 8 cut(s) 185, 235, 541, 1099, 1295, 1410, 1418, 2087
FaqI GGGAC 1 cut(s) 1179
FatI CATG 8 cut(s) 181, 231, 537, 1095, 1291, 1406, 1414, 2083
FauI CCCGC 2 cut(s) 261, 2188
FbaI TGATCA 1 cut(s) 841
FblI GTMKAC 1 cut(s) 796
Fnu4HI GCNGC 5 cut(s) 246, 312, 2101, 2104, 2362
FokI GGATG 5 cut(s) 563, 1320, 1405, 1601, 2003
FriOI GRGCYC 2 cut(s) 1824, 2441
Fsp4HI GCNGC 5 cut(s) 246, 312, 2101, 2104, 2362
FspBI CTAG 5 cut(s) 12, 519, 1496, 1653, 2055
GlaI GCGC 1 cut(s) 1332
GluI GCNGC 5 cut(s) 246, 312, 2101, 2104, 2362
GsuI CTGGAG 4 cut(s) 621, 1113, 2023, 2289
HaeIII GGCC 7 cut(s) 225, 535, 765, 1572, 1822, 2106, 2279
HapII CCGG 5 cut(s) 63, 907, 1145, 1618, 1818
HgaI GACGC 3 cut(s) 2007, 2223, 2458
HhaI GCGC 1 cut(s) 1333
Hin1II CATG 8 cut(s) 185, 235, 541, 1099, 1295, 1410, 1418, 2087
Hin6I GCGC 1 cut(s) 1331
HinP1I GCGC 1 cut(s) 1331
HpaII CCGG 5 cut(s) 63, 907, 1145, 1618, 1818
HphI GGTGA 4 cut(s) 511, 1609, 1673, 2005
Hpy166II GTNNAC 5 cut(s) 94, 304, 785, 797, 1961
Hpy8I GTNNAC 5 cut(s) 94, 304, 785, 797, 1961
Hpy99I CGWCG 3 cut(s) 2078, 2407, 2452
HpyAV CCTTC 9 cut(s) 10, 32, 883, 1105, 1351, 1794, 1884, 1956, 2308
HpyCH4III ACNGT 9 cut(s) 85, 98, 202, 308, 413, 808, 1072, 2017, 2384
HpyCH4IV ACGT 2 cut(s) 154, 1951
HpyF10VI GCNNNNNNNGC 6 cut(s) 1214, 1297, 1339, 1565, 2315, 2324
HpySE526I ACGT 2 cut(s) 154, 1951
Hsp92II CATG 8 cut(s) 185, 235, 541, 1099, 1295, 1410, 1418, 2087
HspAI GCGC 1 cut(s) 1331
Ksp22I TGATCA 1 cut(s) 841
Kzo9I GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
LguI GCTCTTC 2 cut(s) 429, 1272
LmnI GCTCC 6 cut(s) 602, 947, 2004, 2188, 2258, 2436
Lsp1109I GCAGC 3 cut(s) 257, 323, 2087
MaeI CTAG 5 cut(s) 12, 519, 1496, 1653, 2055
MaeII ACGT 2 cut(s) 154, 1951
MaeIII GTNAC 8 cut(s) 808, 1114, 1308, 1434, 1597, 1801, 2011, 2017
MalI GATC 7 cut(s) 242, 516, 775, 843, 1651, 1924, 2297
MbiI CCGCTC 1 cut(s) 2183
MboI GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
MflI RGATCY 2 cut(s) 1649, 1922
MhlI GDGCHC 5 cut(s) 1414, 1534, 1824, 2121, 2441
MlsI TGGCCA 1 cut(s) 1572
MluNI TGGCCA 1 cut(s) 1572
MlyI GAGTC 7 cut(s) 176, 571, 632, 672, 962, 2019, 2119
MmeI TCCRAC 3 cut(s) 348, 1111, 2063
Mox20I TGGCCA 1 cut(s) 1572
Mph1103I ATGCAT 3 cut(s) 1408, 1420, 1482
MroXI GAANNNNTTC 2 cut(s) 191, 462
MscI TGGCCA 1 cut(s) 1572
MseI TTAA 7 cut(s) 594, 938, 1172, 1232, 1548, 1625, 2219
MslI CAYNNNNRTG 3 cut(s) 296, 542, 1509
Msp20I TGGCCA 1 cut(s) 1572
MspA1I CMGCKG 1 cut(s) 314
MspCI CTTAAG 1 cut(s) 2218
MspI CCGG 5 cut(s) 63, 907, 1145, 1618, 1818
MspR9I CCNGG 9 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753, 1819
MvaI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
MvnI CGCG 3 cut(s) 268, 2161, 2254
MwoI GCNNNNNNNGC 6 cut(s) 1214, 1297, 1339, 1565, 2315, 2324
NciI CCSGG 2 cut(s) 1619, 1819
NdeII GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
NlaIII CATG 8 cut(s) 185, 235, 541, 1099, 1295, 1410, 1418, 2087
NlaIV GGNNCC 5 cut(s) 107, 949, 1167, 1822, 2006
NmeAIII GCCGAG 3 cut(s) 96, 2033, 2132
NmuCI GTSAC 4 cut(s) 1308, 1597, 1801, 2011
NruI TCGCGA 1 cut(s) 2254
NsiI ATGCAT 3 cut(s) 1408, 1420, 1482
NspI RCATGY 2 cut(s) 235, 1410
PaeR7I CTCGAG 1 cut(s) 2120
PagI TCATGA 1 cut(s) 2083
PciI ACATGT 1 cut(s) 231
PciSI GCTCTTC 2 cut(s) 429, 1272
PcsI WCGNNNNNNNCGW 2 cut(s) 2005, 2165
PdmI GAANNNNTTC 2 cut(s) 191, 462
PfeI GAWTC 5 cut(s) 1027, 1106, 1274, 2111, 2374
PkrI GCNGC 5 cut(s) 247, 313, 2102, 2105, 2363
PleI GAGTC 7 cut(s) 175, 570, 631, 672, 962, 2018, 2119
PpsI GAGTC 7 cut(s) 175, 570, 631, 672, 962, 2018, 2119
PpuMI RGGWCCY 1 cut(s) 1541
PscI ACATGT 1 cut(s) 231
PshBI ATTAAT 2 cut(s) 594, 938
Psp124BI GAGCTC 1 cut(s) 2441
Psp5II RGGWCCY 1 cut(s) 1541
Psp6I CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
PspEI GGTNACC 1 cut(s) 1434
PspGI CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
PspN4I GGNNCC 5 cut(s) 107, 949, 1167, 1822, 2006
PspOMI GGGCCC 1 cut(s) 1820
PspPI GGNCC 8 cut(s) 224, 534, 1166, 1541, 1820, 1821, 1865, 2027
PspPPI RGGWCCY 1 cut(s) 1541
PstNI CAGNNNCTG 5 cut(s) 1046, 1544, 1858, 1987, 2267
PsuI RGATCY 2 cut(s) 1649, 1922
RruI TCGCGA 1 cut(s) 2254
RsaI GTAC 7 cut(s) 265, 305, 511, 1816, 1977, 2136, 2423
RsaNI GTAC 7 cut(s) 264, 304, 510, 1815, 1976, 2135, 2422
RseI CAYNNNNRTG 3 cut(s) 296, 542, 1509
SacI GAGCTC 1 cut(s) 2441
SapI GCTCTTC 2 cut(s) 429, 1272
SaqAI TTAA 7 cut(s) 594, 938, 1172, 1232, 1548, 1625, 2219
SatI GCNGC 5 cut(s) 246, 312, 2101, 2104, 2362
Sau3AI GATC 7 cut(s) 240, 514, 773, 841, 1649, 1922, 2295
Sau96I GGNCC 8 cut(s) 224, 534, 1166, 1541, 1820, 1821, 1865, 2027
SchI GAGTC 7 cut(s) 176, 571, 632, 672, 962, 2019, 2119
ScrFI CCNGG 9 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753, 1819
SduI GDGCHC 5 cut(s) 1414, 1534, 1824, 2121, 2441
SfcI CTRYAG 3 cut(s) 198, 1536, 2139
Sfr274I CTCGAG 1 cut(s) 2120
SinI GGWCC 4 cut(s) 1166, 1541, 1865, 2027
SlaI CTCGAG 1 cut(s) 2120
SmiMI CAYNNNNRTG 3 cut(s) 296, 542, 1509
SmlI CTYRAG 4 cut(s) 206, 2120, 2212, 2218
SmoI CTYRAG 4 cut(s) 206, 2120, 2212, 2218
SsiI CCGC 9 cut(s) 268, 314, 1208, 1439, 2103, 2161, 2181, 2344, 2361
SspI AATATT 1 cut(s) 942
SspMI CTAG 5 cut(s) 12, 519, 1496, 1653, 2055
SstI GAGCTC 1 cut(s) 2441
StyD4I CCNGG 9 cut(s) 217, 565, 760, 765, 800, 1237, 1617, 1751, 1817
StyI CCWWGG 1 cut(s) 1337
TaaI ACNGT 9 cut(s) 85, 98, 202, 308, 413, 808, 1072, 2017, 2384
TaiI ACGT 2 cut(s) 157, 1954
TaqI TCGA 8 cut(s) 1109, 1919, 2121, 2128, 2351, 2405, 2441, 2447
TaqII GACCGA 1 cut(s) 1296
TatI WGTACW 2 cut(s) 303, 509
TauI GCSGC 2 cut(s) 2106, 2364
TfiI GAWTC 5 cut(s) 1027, 1106, 1274, 2111, 2374
Tru1I TTAA 7 cut(s) 594, 938, 1172, 1232, 1548, 1625, 2219
Tru9I TTAA 7 cut(s) 594, 938, 1172, 1232, 1548, 1625, 2219
TscAI CASTG 6 cut(s) 664, 1806, 1988, 2029, 2253, 2420
TseFI GTSAC 4 cut(s) 1308, 1597, 1801, 2011
TseI GCWGC 3 cut(s) 245, 311, 2100
Tsp45I GTSAC 4 cut(s) 1308, 1597, 1801, 2011
TspDTI ATGAA 6 cut(s) 104, 177, 1084, 1443, 1715, 2100
TspGWI ACGGA 1 cut(s) 1093
TspRI CASTG 6 cut(s) 664, 1806, 1988, 2029, 2253, 2420
Vha464I CTTAAG 1 cut(s) 2218
VpaK11BI GGWCC 4 cut(s) 1166, 1541, 1865, 2027
VspI ATTAAT 2 cut(s) 594, 938
XapI RAATTY 6 cut(s) 212, 251, 1001, 1676, 1896, 2443
XbaI TCTAGA 1 cut(s) 1652
XceI RCATGY 2 cut(s) 235, 1410
XhoI CTCGAG 1 cut(s) 2120
XmiI GTMKAC 1 cut(s) 796
XmnI GAANNNNTTC 2 cut(s) 191, 462
XspI CTAG 5 cut(s) 12, 519, 1496, 1653, 2055
Zsp2I ATGCAT 3 cut(s) 1408, 1420, 1482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.