Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003465.1

Orthogroup ID

OG0005874

Physical Location & Seq

Genomic Coordinates Reverse (-)

222920 .. 237475

Gene Structure 14556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003465.1_g000048.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

atggcggggccgttgcttcgctctgtctggtcctctacgcgtaacactctctcctcttcctcctccaaaccctaccttcgtccctccgcactcgcccgcaccttctcggcggccactgcggccaccgatgctactctacagaggagcagcctgctcgacccggcccgcctccgcaacgtggcagtgatagcgcacgttgaccacggcaagaccaccctcatggaccgcctcctccgccagtgcggcgccgacatcccccacgaacgcgccatggattccatcagcctcgagcgcgagcgcggcatcactatcgcctccaaggttacgtcggttttctggaaggagaatgagctaaacatggttgatacgcctggacatgcagactttggtggtgaagttgagcgggttgtcggtatggttgagggagcagttttagttgttgatgccggggaaggtccgcttgcacagaccaagtttgtgcttgccaaagccttaaaatacgggctgcgtcctattcttcttctaaacaaagtagatcggcctgcagtttctgaggagatgtgcgatgaagttgagagtctggtatttgatctttttgcaaatctcggtgctacagaggagcagctggattttccagtgctatatgcttctgctaaagaaggatgggcctcggctactttcactaaagaacctcctgctgattcaagaaacatgtcgcagctgcttgatgctattatcagacatgttcccccaccaagtgcaaacgttgaggcacctttccagatgctggtttccatgatggaaaaggacttctaccttgggcgaatattgactggacgggtttcttctggctgtgttcgcgttggtgatagagttcatgggcttcgtaacaaagattctggagttgagaaaattgaagaagggaaggttgtgaaactgatgaaaaagaagggaacaaatatggttctcattgacagtgctggagcgggtgacataatatcaatggctgggttagcaagtccatctattggccatacagtcactagcgttgaggtaatgactgcattaccaaccgttgagttggatccaccaactatttccatgacttttggtgtaaatgactctccattagctggccgtgatggtagccatctgaccggaggaaagatcggggatcggctatcagctgaagcagaaacaaatcttgctattaatgtcctcccaggcttatcagaatcattcgaagttcaggggaggggagaactgcaactcggtatattaattgagaatatgaggcgtgaaggttttgagctctctgtgtcaccacccaaagtcatgtataaaacagagaatggtcaaaggctcgagccaattgaagaagttactatagaggtaaatgaagaccatgtggggttagttatggaagccttatctcataggcgagctgaggttcttgacatgggtcctgttccaggaaatgatggcaggactagattgtctttgacatgtccatccaggggactggttggttacagaagtgtatttagcagtgccacgcgtggaactgggtttatgcatcgtgctttcttaacgtatgaaaaatttcgaggtcctcttggaaatgtgcggaaaggggttttggtgtcaatgggctatggtacaatcacatcctatgcattaatgagtttagaacctcgtggaactctatttgtgacacctggtatggagacatatgatggcatgattgttggtgaacattcgagggagacggatctagatgtcaacccagtaaggaacaaagaacttacaaatattcgttctgctggcaaggatgaaaatgtgaaactatctcctcctcgccttatgactcttgaagaagccatagggtatgtagcctcggatgagctcattgaggttacaccgaagtccatccggttacggaagaaatatctggatgtcaacaagcgtaaaaccatgagcaaaaggccaaaggaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C GTP_EFTU GTP_EFTU_D2

Protein Analysis

665

Amino Acids

72.42

Weight (kDa)

6.26

Isoelectric Point (pI)

41.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005874)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31060 AT2G31060 AT2G31060
fragaria_vesca	FvH4_6g26910 FvH4_6g26910 FvH4_6g26910 FvH4_6g26910 FvH4_6g26910
malus_domestica	MD05G1202600.v1.1 MD09G1241200.v1.1
prunus_persica	Prupe.3G126600_v2.0.a1 Prupe.3G126600_v2.0.a1 Prupe.3G126600_v2.0.a1 Prupe.3G126600_v2.0.a1
pyrus_communis	pycom09g15990 pycom11g16100 pycom17g23730
rosa_chinensis	RchiOBHm_Chr2g0128661
rosa_laevigata	RLG00000019015
rosa_multiflora	Rmu_sc0003465.1_g000048
rosa_roxburghii	Rroxscaffold_2G00115410 Rroxscaffold_2G00115890
rosa_rugosa	Rorug02G0279700
rosa_samantha	Rh2BG341000 Rh2CG319800 Rh2DG357600
rosa_wichuraiana	Rw2G026900 Rw2G027160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1495
AccB1I	GGYRCC	2 cut(s)	245, 772
AccB7I	CCANNNNNTGG	3 cut(s)	787, 1028, 1133
AccBSI	CCGCTC	2 cut(s)	403, 986
AccII	CGCG	6 cut(s)	40, 267, 294, 300, 861, 1558
AclI	AACGTT	1 cut(s)	765
AclWI	GGATC	4 cut(s)	1079, 1092, 1182, 1779
AcoI	YGGCCR	4 cut(s)	111, 120, 1030, 1135
AcsI	RAATTY	1 cut(s)	1601
AcuI	CTGAAG	1 cut(s)	1209
AcyI	GRCGYC	1 cut(s)	246
AdeI	CACNNNGTG	1 cut(s)	758
AfaI	GTAC	1 cut(s)	1660
AfiI	CCNNNNNNNGG	6 cut(s)	178, 787, 1028, 1133, 1472, 1517
AflIII	ACRYGT	5 cut(s)	38, 711, 742, 1505, 1556
AgsI	TTSAA	4 cut(s)	705, 917, 1376, 1874
AjnI	CCWGG	5 cut(s)	370, 1222, 1471, 1514, 1717
AjuI	GAANNNNNNNTTGG	2 cut(s)	1622, 1654
AluBI	AGCT	8 cut(s)	352, 625, 721, 1133, 1187, 1312, 1445, 1906
AluI	AGCT	8 cut(s)	352, 625, 721, 1133, 1187, 1312, 1445, 1906
Alw21I	GWGCWC	2 cut(s)	1314, 1908
Alw26I	GTCTC	2 cut(s)	1721, 1760
AlwI	GGATC	4 cut(s)	1079, 1092, 1182, 1779
AlwNI	CAGNNNCTG	2 cut(s)	551, 787
Ama87I	CYCGRG	2 cut(s)	287, 1364
AoxI	GGCC	9 cut(s)	8, 111, 120, 162, 539, 666, 1030, 1135, 1985
ApeKI	GCWGC	5 cut(s)	147, 505, 622, 718, 721
ApoI	RAATTY	1 cut(s)	1601
AseI	ATTAAT	3 cut(s)	1212, 1280, 1679
Asp700I	GAANNNNTTC	1 cut(s)	1602
AspLEI	GCGC	5 cut(s)	193, 248, 269, 294, 300
AspS9I	GGNCC	8 cut(s)	8, 30, 163, 223, 455, 666, 1463, 1610
AsuC2I	CCSGG	2 cut(s)	161, 448
AsuHPI	GGTGA	5 cut(s)	404, 878, 1001, 1314, 1763
AsuII	TTCGAA	1 cut(s)	1242
AvaI	CYCGRG	2 cut(s)	287, 1364
AvaII	GGWCC	5 cut(s)	30, 223, 455, 1463, 1610
BalI	TGGCCA	1 cut(s)	1032
BamHI	GGATCC	1 cut(s)	1084
BanI	GGYRCC	2 cut(s)	245, 772
BanII	GRGCYC	2 cut(s)	1314, 1908
BauI	CACGAG	1 cut(s)	1695
BbsI	GAAGAC	1 cut(s)	1407
Bbv12I	GWGCWC	2 cut(s)	1314, 1908
BbvCI	CCTCAGC	1 cut(s)	1446
BbvI	GCAGC	5 cut(s)	159, 492, 634, 708, 730
BceAI	ACGGC	2 cut(s)	220, 1122
BcgI	CGANNNNNNTGC	4 cut(s)	136, 170, 292, 326
BciT130I	CCWGG	5 cut(s)	372, 1224, 1473, 1516, 1719
BcnI	CCSGG	2 cut(s)	161, 448
BcoDI	GTCTC	2 cut(s)	1721, 1760
BfaI	CTAG	3 cut(s)	1044, 1491, 1775
BfmI	CTRYAG	4 cut(s)	137, 543, 612, 1386
BfoI	RGCGCY	1 cut(s)	249
BglI	GCCNNNNNGGC	2 cut(s)	119, 243
BisI	GCNGC	9 cut(s)	111, 120, 148, 244, 301, 506, 623, 719, 722
BlsI	GCNGC	9 cut(s)	112, 121, 149, 245, 302, 507, 624, 720, 723
Bme1390I	CCNGG	7 cut(s)	161, 372, 448, 1224, 1473, 1516, 1719
Bme18I	GGWCC	5 cut(s)	30, 223, 455, 1463, 1610
BmeT110I	CYCGRG	2 cut(s)	287, 1364
BmgT120I	GGNCC	8 cut(s)	8, 30, 163, 223, 455, 666, 1463, 1610
BmiI	GGNNCC	5 cut(s)	9, 247, 774, 1086, 1464
BmrFI	CCNGG	7 cut(s)	161, 372, 448, 1224, 1473, 1516, 1719
BmrI	ACTGGG	2 cut(s)	1575, 1781
BmsI	GCATC	6 cut(s)	118, 312, 433, 718, 774, 1585
BmuI	ACTGGG	2 cut(s)	1575, 1781
BoxI	GACNNNNGTC	1 cut(s)	1461
BpiI	GAAGAC	1 cut(s)	1407
BpmI	CTGGAG	2 cut(s)	921, 1002
Bpu10I	CCTNAGC	1 cut(s)	1446
Bpu14I	TTCGAA	1 cut(s)	1242
BpuMI	CCSGG	2 cut(s)	161, 448
BsaHI	GRCGYC	1 cut(s)	246
BsaJI	CCNNGG	9 cut(s)	202, 270, 318, 447, 669, 817, 1222, 1515, 1896
BsaWI	WCCGGW	2 cut(s)	1157, 1932
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	6 cut(s)	178, 787, 1028, 1133, 1472, 1517
Bse1I	ACTGG	6 cut(s)	238, 635, 838, 1527, 1570, 1787
BseBI	CCWGG	5 cut(s)	372, 1224, 1473, 1516, 1719
BseDI	CCNNGG	9 cut(s)	202, 270, 318, 447, 669, 817, 1222, 1515, 1896
BseGI	GGATG	8 cut(s)	252, 668, 1511, 1667, 1837, 1906, 1929, 1960
BseLI	CCNNNNNNNGG	6 cut(s)	178, 787, 1028, 1133, 1472, 1517
BseMII	CTCAG	2 cut(s)	543, 1437
BseNI	ACTGG	6 cut(s)	238, 635, 838, 1527, 1570, 1787
BseRI	GAGGAG	8 cut(s)	43, 52, 157, 221, 569, 632, 1842, 1845
BseXI	GCAGC	5 cut(s)	159, 492, 634, 708, 730
BseYI	CCCAGC	1 cut(s)	1007
Bsh1236I	CGCG	6 cut(s)	40, 267, 294, 300, 861, 1558
BshFI	GGCC	9 cut(s)	10, 113, 122, 164, 541, 668, 1032, 1137, 1987
BshNI	GGYRCC	2 cut(s)	245, 772
BsiHKAI	GWGCWC	2 cut(s)	1314, 1908
BsiHKCI	CYCGRG	2 cut(s)	287, 1364
BsiSI	CCGG	4 cut(s)	161, 447, 1158, 1933
BslFI	GGGAC	2 cut(s)	66, 1533
BslI	CCNNNNNNNGG	6 cut(s)	178, 787, 1028, 1133, 1472, 1517
BsmAI	GTCTC	2 cut(s)	1721, 1760
BsmBI	CGTCTC	1 cut(s)	1760
BsmFI	GGGAC	2 cut(s)	66, 1533
BsnI	GGCC	9 cut(s)	10, 113, 122, 164, 541, 668, 1032, 1137, 1987
BsoBI	CYCGRG	2 cut(s)	287, 1364
Bsp119I	TTCGAA	1 cut(s)	1242
Bsp1286I	GDGCHC	2 cut(s)	1314, 1908
Bsp143I	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
Bsp19I	CCATGG	1 cut(s)	270
BspANI	GGCC	9 cut(s)	10, 113, 122, 164, 541, 668, 1032, 1137, 1987
BspCNI	CTCAG	2 cut(s)	544, 1438
BspFNI	CGCG	6 cut(s)	40, 267, 294, 300, 861, 1558
BspLI	GGNNCC	5 cut(s)	9, 247, 774, 1086, 1464
BspMAI	CTGCAG	1 cut(s)	547
BspPI	GGATC	4 cut(s)	1079, 1092, 1182, 1779
BspT104I	TTCGAA	1 cut(s)	1242
BspT107I	GGYRCC	2 cut(s)	245, 772
BsrBI	CCGCTC	2 cut(s)	403, 986
BsrI	ACTGG	6 cut(s)	238, 635, 838, 1527, 1570, 1787
BssECI	CCNNGG	9 cut(s)	202, 270, 318, 447, 669, 817, 1222, 1515, 1896
BssMI	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
BssNI	GRCGYC	1 cut(s)	246
BssSI	CACGAG	1 cut(s)	1695
BssT1I	CCWWGG	3 cut(s)	270, 318, 817
Bst2BI	CACGAG	1 cut(s)	1695
Bst2UI	CCWGG	5 cut(s)	372, 1224, 1473, 1516, 1719
Bst4CI	ACNGT	3 cut(s)	977, 1039, 1075
Bst6I	CTCTTC	1 cut(s)	61
BstACI	GRCGYC	1 cut(s)	246
BstBI	TTCGAA	1 cut(s)	1242
BstDEI	CTNAG	2 cut(s)	552, 1446
BstDSI	CCRYGG	2 cut(s)	202, 270
BstENI	CCTNNNNNAGG	1 cut(s)	1470
BstF5I	GGATG	8 cut(s)	252, 668, 1511, 1667, 1837, 1906, 1929, 1960
BstFNI	CGCG	6 cut(s)	40, 267, 294, 300, 861, 1558
BstH2I	RGCGCY	1 cut(s)	249
BstHHI	GCGC	5 cut(s)	193, 248, 269, 294, 300
BstKTI	GATC	6 cut(s)	538, 592, 1087, 1170, 1177, 1774
BstMAI	GTCTC	2 cut(s)	1721, 1760
BstMBI	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
BstNI	CCWGG	5 cut(s)	372, 1224, 1473, 1516, 1719
BstNSI	RCATGY	4 cut(s)	380, 715, 746, 1509
BstPAI	GACNNNNGTC	1 cut(s)	1461
BstSCI	CCNGG	7 cut(s)	159, 370, 446, 1222, 1471, 1514, 1717
BstSFI	CTRYAG	4 cut(s)	137, 543, 612, 1386
BstUI	CGCG	6 cut(s)	40, 267, 294, 300, 861, 1558
BstV1I	GCAGC	5 cut(s)	159, 492, 634, 708, 730
BstV2I	GAAGAC	1 cut(s)	1407
BstX2I	RGATCY	2 cut(s)	1084, 1771
BstXI	CCANNNNNNTGG	2 cut(s)	220, 1522
BstYI	RGATCY	2 cut(s)	1084, 1771
BsuRI	GGCC	9 cut(s)	10, 113, 122, 164, 541, 668, 1032, 1137, 1987
BtgI	CCRYGG	2 cut(s)	202, 270
BtgZI	GCGATG	1 cut(s)	579
BtsCI	GGATG	8 cut(s)	252, 668, 1511, 1667, 1837, 1906, 1929, 1960
BtsI	GCAGTG	3 cut(s)	114, 189, 1555
BtsIMutI	CAGTG	6 cut(s)	114, 189, 245, 642, 982, 1555
CaiI	CAGNNNCTG	2 cut(s)	551, 787
CfoI	GCGC	5 cut(s)	193, 248, 269, 294, 300
Cfr13I	GGNCC	8 cut(s)	8, 30, 163, 223, 455, 666, 1463, 1610
CseI	GACGC	1 cut(s)	497
CsiI	ACCWGGT	1 cut(s)	1717
Csp6I	GTAC	1 cut(s)	1659
CviQI	GTAC	1 cut(s)	1659
DdeI	CTNAG	2 cut(s)	552, 1446
DinI	GGCGCC	1 cut(s)	247
DpnI	GATC	6 cut(s)	537, 591, 1086, 1169, 1176, 1773
DpnII	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
DraIII	CACNNNGTG	1 cut(s)	758
DrdI	GACNNNNNNGTC	1 cut(s)	1495
DseDI	GACNNNNNNGTC	1 cut(s)	1495
EaeI	YGGCCR	4 cut(s)	111, 120, 1030, 1135
Eam1104I	CTCTTC	1 cut(s)	61
EarI	CTCTTC	1 cut(s)	61
EciI	GGCGGA	1 cut(s)	224
Ecl136II	GAGCTC	2 cut(s)	1312, 1906
Eco130I	CCWWGG	3 cut(s)	270, 318, 817
Eco24I	GRGCYC	2 cut(s)	1314, 1908
Eco47I	GGWCC	5 cut(s)	30, 223, 455, 1463, 1610
Eco53kI	GAGCTC	2 cut(s)	1312, 1906
Eco57I	CTGAAG	1 cut(s)	1209
Eco88I	CYCGRG	2 cut(s)	287, 1364
EcoICRI	GAGCTC	2 cut(s)	1312, 1906
EcoNI	CCTNNNNNAGG	1 cut(s)	1470
EcoO109I	RGGNCCY	2 cut(s)	1463, 1610
EcoRII	CCWGG	5 cut(s)	370, 1222, 1471, 1514, 1717
EcoT14I	CCWWGG	3 cut(s)	270, 318, 817
EcoT22I	ATGCAT	2 cut(s)	1578, 1678
EcoT38I	GRGCYC	2 cut(s)	1314, 1908
EgeI	GGCGCC	1 cut(s)	247
EheI	GGCGCC	1 cut(s)	247
ErhI	CCWWGG	3 cut(s)	270, 318, 817
Esp3I	CGTCTC	1 cut(s)	1760
FalI	AAGNNNNNCTT	2 cut(s)	444, 476
FaqI	GGGAC	2 cut(s)	66, 1533
FauI	CCCGC	4 cut(s)	104, 173, 396, 979
FauNDI	CATATG	1 cut(s)	1732
Fnu4HI	GCNGC	9 cut(s)	111, 120, 148, 244, 301, 506, 623, 719, 722
FokI	GGATG	8 cut(s)	239, 675, 1498, 1654, 1844, 1913, 1916, 1967
FriOI	GRGCYC	2 cut(s)	1314, 1908
Fsp4HI	GCNGC	9 cut(s)	111, 120, 148, 244, 301, 506, 623, 719, 722
FspBI	CTAG	3 cut(s)	1044, 1491, 1775
GlaI	GCGC	5 cut(s)	192, 247, 268, 293, 299
GluI	GCNGC	9 cut(s)	111, 120, 148, 244, 301, 506, 623, 719, 722
GsaI	CCCAGC	1 cut(s)	1011
GsuI	CTGGAG	2 cut(s)	921, 1002
HaeII	RGCGCY	1 cut(s)	249
HaeIII	GGCC	9 cut(s)	10, 113, 122, 164, 541, 668, 1032, 1137, 1987
HapII	CCGG	4 cut(s)	161, 447, 1158, 1933
HgaI	GACGC	1 cut(s)	497
HhaI	GCGC	5 cut(s)	193, 248, 269, 294, 300
Hin1I	GRCGYC	1 cut(s)	246
Hin6I	GCGC	5 cut(s)	191, 246, 267, 292, 298
HinP1I	GCGC	5 cut(s)	191, 246, 267, 292, 298
HincII	GTYRAC	3 cut(s)	199, 1783, 1960
HindII	GTYRAC	3 cut(s)	199, 1783, 1960
HinfI	GANTC	7 cut(s)	275, 577, 701, 896, 1121, 1235, 1867
HpaII	CCGG	4 cut(s)	161, 447, 1158, 1933
HphI	GGTGA	5 cut(s)	404, 878, 1001, 1314, 1763
Hpy166II	GTNNAC	4 cut(s)	199, 1754, 1783, 1960
Hpy188I	TCNGA	5 cut(s)	553, 740, 1155, 1234, 1900
Hpy188III	TCNNGA	8 cut(s)	337, 705, 781, 900, 1454, 1775, 1871, 1952
Hpy8I	GTNNAC	4 cut(s)	199, 1754, 1783, 1960
Hpy99I	CGWCG	1 cut(s)	331
HpyAV	CCTTC	9 cut(s)	86, 112, 334, 446, 653, 914, 919, 943, 1295
HpyCH4III	ACNGT	3 cut(s)	977, 1039, 1075
HpyCH4IV	ACGT	5 cut(s)	177, 195, 326, 765, 1592
HpyCH4V	TGCA	9 cut(s)	380, 464, 545, 599, 761, 1064, 1267, 1576, 1676
HpyF3I	CTNAG	2 cut(s)	552, 1446
HpySE526I	ACGT	5 cut(s)	177, 195, 326, 765, 1592
Hsp92I	GRCGYC	1 cut(s)	246
HspAI	GCGC	5 cut(s)	191, 246, 267, 292, 298
KasI	GGCGCC	1 cut(s)	245
Kzo9I	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
LmnI	GCTCC	4 cut(s)	144, 425, 619, 983
Lsp1109I	GCAGC	5 cut(s)	159, 492, 634, 708, 730
LweI	GCATC	6 cut(s)	118, 312, 433, 718, 774, 1585
MabI	ACCWGGT	1 cut(s)	1717
MaeI	CTAG	3 cut(s)	1044, 1491, 1775
MaeII	ACGT	5 cut(s)	177, 195, 326, 765, 1592
MalI	GATC	6 cut(s)	537, 591, 1086, 1169, 1176, 1773
MbiI	CCGCTC	2 cut(s)	403, 986
MboI	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
MboII	GAAGA	9 cut(s)	48, 509, 512, 837, 929, 1388, 1412, 1886, 1954
MfeI	CAATTG	1 cut(s)	1371
MflI	RGATCY	2 cut(s)	1084, 1771
MhlI	GDGCHC	2 cut(s)	1314, 1908
MlsI	TGGCCA	1 cut(s)	1032
MluCI	AATT	4 cut(s)	912, 1281, 1371, 1601
MluI	ACGCGT	2 cut(s)	38, 1556
MluNI	TGGCCA	1 cut(s)	1032
Mly113I	GGCGCC	1 cut(s)	246
MlyI	GAGTC	3 cut(s)	586, 1115, 1861
MmeI	TCCRAC	1 cut(s)	1062
Mox20I	TGGCCA	1 cut(s)	1032
Mph1103I	ATGCAT	2 cut(s)	1578, 1678
MroXI	GAANNNNTTC	1 cut(s)	1602
MscI	TGGCCA	1 cut(s)	1032
MseI	TTAA	5 cut(s)	494, 1212, 1280, 1589, 1679
MslI	CAYNNNNRTG	1 cut(s)	218
Msp20I	TGGCCA	1 cut(s)	1032
MspA1I	CMGCKG	3 cut(s)	625, 721, 1187
MspI	CCGG	4 cut(s)	161, 447, 1158, 1933
MspR9I	CCNGG	7 cut(s)	161, 372, 448, 1224, 1473, 1516, 1719
MunI	CAATTG	1 cut(s)	1371
MvaI	CCWGG	5 cut(s)	372, 1224, 1473, 1516, 1719
MvnI	CGCG	6 cut(s)	40, 267, 294, 300, 861, 1558
NarI	GGCGCC	1 cut(s)	246
NciI	CCSGG	2 cut(s)	161, 448
NcoI	CCATGG	1 cut(s)	270
NdeI	CATATG	1 cut(s)	1732
NdeII	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
NlaIV	GGNNCC	5 cut(s)	9, 247, 774, 1086, 1464
NmeAIII	GCCGAG	2 cut(s)	86, 650
NmuCI	GTSAC	4 cut(s)	989, 1039, 1320, 1711
NsiI	ATGCAT	2 cut(s)	1578, 1678
NspI	RCATGY	4 cut(s)	380, 715, 746, 1509
NspV	TTCGAA	1 cut(s)	1242
PaeR7I	CTCGAG	2 cut(s)	287, 1364
PciI	ACATGT	3 cut(s)	711, 742, 1505
PdmI	GAANNNNTTC	1 cut(s)	1602
PfeI	GAWTC	4 cut(s)	275, 701, 896, 1235
PflMI	CCANNNNNTGG	3 cut(s)	787, 1028, 1133
PfoI	TCCNGGA	1 cut(s)	1471
PkrI	GCNGC	9 cut(s)	112, 121, 149, 245, 302, 507, 624, 720, 723
PleI	GAGTC	3 cut(s)	585, 1115, 1861
PluTI	GGCGCC	1 cut(s)	249
PpsI	GAGTC	3 cut(s)	585, 1115, 1861
PpuMI	RGGWCCY	2 cut(s)	1463, 1610
PscI	ACATGT	3 cut(s)	711, 742, 1505
PshAI	GACNNNNGTC	1 cut(s)	1461
PshBI	ATTAAT	3 cut(s)	1212, 1280, 1679
Psp124BI	GAGCTC	2 cut(s)	1314, 1908
Psp1406I	AACGTT	1 cut(s)	765
Psp5II	RGGWCCY	2 cut(s)	1463, 1610
Psp6I	CCWGG	5 cut(s)	370, 1222, 1471, 1514, 1717
PspFI	CCCAGC	1 cut(s)	1007
PspGI	CCWGG	5 cut(s)	370, 1222, 1471, 1514, 1717
PspN4I	GGNNCC	5 cut(s)	9, 247, 774, 1086, 1464
PspPI	GGNCC	8 cut(s)	8, 30, 163, 223, 455, 666, 1463, 1610
PspPPI	RGGWCCY	2 cut(s)	1463, 1610
PspXI	VCTCGAGB	2 cut(s)	287, 1364
PstI	CTGCAG	1 cut(s)	547
PstNI	CAGNNNCTG	2 cut(s)	551, 787
PsuI	RGATCY	2 cut(s)	1084, 1771
PvuII	CAGCTG	3 cut(s)	625, 721, 1187
RsaI	GTAC	1 cut(s)	1660
RsaNI	GTAC	1 cut(s)	1659
RseI	CAYNNNNRTG	1 cut(s)	218
SacI	GAGCTC	2 cut(s)	1314, 1908
SaqAI	TTAA	5 cut(s)	494, 1212, 1280, 1589, 1679
SatI	GCNGC	9 cut(s)	111, 120, 148, 244, 301, 506, 623, 719, 722
Sau3AI	GATC	6 cut(s)	535, 589, 1084, 1167, 1174, 1771
Sau96I	GGNCC	8 cut(s)	8, 30, 163, 223, 455, 666, 1463, 1610
SchI	GAGTC	3 cut(s)	586, 1115, 1861
ScrFI	CCNGG	7 cut(s)	161, 372, 448, 1224, 1473, 1516, 1719
SduI	GDGCHC	2 cut(s)	1314, 1908
SexAI	ACCWGGT	1 cut(s)	1717
SfaNI	GCATC	6 cut(s)	118, 312, 433, 718, 774, 1585
SfcI	CTRYAG	4 cut(s)	137, 543, 612, 1386
SfiI	GGCCNNNNNGGCC	1 cut(s)	119
SfoI	GGCGCC	1 cut(s)	247
Sfr274I	CTCGAG	2 cut(s)	287, 1364
SfuI	TTCGAA	1 cut(s)	1242
SinI	GGWCC	5 cut(s)	30, 223, 455, 1463, 1610
SlaI	CTCGAG	2 cut(s)	287, 1364
SmiMI	CAYNNNNRTG	1 cut(s)	218
SmlI	CTYRAG	2 cut(s)	287, 1364
SmoI	CTYRAG	2 cut(s)	287, 1364
Sse9I	AATT	4 cut(s)	912, 1281, 1371, 1601
SspDI	GGCGCC	1 cut(s)	245
SspI	AATATT	2 cut(s)	828, 1813
SspMI	CTAG	3 cut(s)	1044, 1491, 1775
SstI	GAGCTC	2 cut(s)	1314, 1908
StyD4I	CCNGG	7 cut(s)	159, 370, 446, 1222, 1471, 1514, 1717
StyI	CCWWGG	3 cut(s)	270, 318, 817
TaaI	ACNGT	3 cut(s)	977, 1039, 1075
TaiI	ACGT	5 cut(s)	180, 198, 329, 768, 1595
TaqI	TCGA	6 cut(s)	156, 288, 1242, 1365, 1606, 1760
TasI	AATT	4 cut(s)	912, 1281, 1371, 1601
TauI	GCSGC	4 cut(s)	113, 122, 246, 303
TfiI	GAWTC	4 cut(s)	275, 701, 896, 1235
Tru1I	TTAA	5 cut(s)	494, 1212, 1280, 1589, 1679
Tru9I	TTAA	5 cut(s)	494, 1212, 1280, 1589, 1679
TscAI	CASTG	6 cut(s)	121, 189, 245, 642, 982, 1555
TseFI	GTSAC	4 cut(s)	989, 1039, 1320, 1711
TseI	GCWGC	5 cut(s)	147, 505, 622, 718, 721
Tsp45I	GTSAC	4 cut(s)	989, 1039, 1320, 1711
TspDTI	ATGAA	6 cut(s)	582, 866, 956, 1413, 1611, 1848
TspGWI	ACGGA	2 cut(s)	1784, 1954
TspRI	CASTG	6 cut(s)	121, 189, 245, 642, 982, 1555
Van91I	CCANNNNNTGG	3 cut(s)	787, 1028, 1133
VpaK11BI	GGWCC	5 cut(s)	30, 223, 455, 1463, 1610
VspI	ATTAAT	3 cut(s)	1212, 1280, 1679
XagI	CCTNNNNNAGG	1 cut(s)	1470
XapI	RAATTY	1 cut(s)	1601
XbaI	TCTAGA	1 cut(s)	1774
XceI	RCATGY	4 cut(s)	380, 715, 746, 1509
XhoI	CTCGAG	2 cut(s)	287, 1364
XmnI	GAANNNNTTC	1 cut(s)	1602
XspI	CTAG	3 cut(s)	1044, 1491, 1775
Zsp2I	ATGCAT	2 cut(s)	1578, 1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.