Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0107571 |
| rosa_multiflora | Rmu_co8225042.1_g000001 Rmu_sc0000753.1_g000022 Rmu_sc0001476.1_g000014 Rmu_sc0004009.1_g000004 Rmu_sc0004090.1_g000008 Rmu_sc0004924.1_g000038 |
| rosa_roxburghii | Rroxscaffold_2G00104040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 71 |
| AcyI | GRCGYC | 1 cut(s) | 93 |
| AgsI | TTSAA | 2 cut(s) | 41, 256 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 69, 101 |
| AspS9I | GGNCC | 1 cut(s) | 158 |
| AsuHPI | GGTGA | 1 cut(s) | 110 |
| AvaII | GGWCC | 1 cut(s) | 158 |
| BauI | CACGAG | 1 cut(s) | 33 |
| BccI | CCATC | 1 cut(s) | 197 |
| BfmI | CTRYAG | 1 cut(s) | 169 |
| Bme18I | GGWCC | 1 cut(s) | 158 |
| BmgT120I | GGNCC | 1 cut(s) | 158 |
| BmsI | GCATC | 1 cut(s) | 171 |
| BsaBI | GATNNNNATC | 1 cut(s) | 138 |
| BsaHI | GRCGYC | 1 cut(s) | 93 |
| BsaJI | CCNNGG | 1 cut(s) | 161 |
| Bse118I | RCCGGY | 1 cut(s) | 95 |
| Bse8I | GATNNNNATC | 1 cut(s) | 138 |
| BseDI | CCNNGG | 1 cut(s) | 161 |
| BseGI | GGATG | 1 cut(s) | 63 |
| BseJI | GATNNNNATC | 1 cut(s) | 138 |
| BsiSI | CCGG | 1 cut(s) | 96 |
| BslFI | GGGAC | 1 cut(s) | 90 |
| BsmFI | GGGAC | 1 cut(s) | 90 |
| Bsp143I | GATC | 2 cut(s) | 133, 240 |
| Bsp19I | CCATGG | 1 cut(s) | 161 |
| BspACI | CCGC | 1 cut(s) | 71 |
| BspHI | TCATGA | 1 cut(s) | 88 |
| BsrFI | RCCGGY | 1 cut(s) | 95 |
| BssAI | RCCGGY | 1 cut(s) | 95 |
| BssECI | CCNNGG | 1 cut(s) | 161 |
| BssMI | GATC | 2 cut(s) | 133, 240 |
| BssNI | GRCGYC | 1 cut(s) | 93 |
| BssSI | CACGAG | 1 cut(s) | 33 |
| BssT1I | CCWWGG | 1 cut(s) | 161 |
| Bst2BI | CACGAG | 1 cut(s) | 33 |
| Bst4CI | ACNGT | 1 cut(s) | 267 |
| BstACI | GRCGYC | 1 cut(s) | 93 |
| BstDSI | CCRYGG | 1 cut(s) | 161 |
| BstF5I | GGATG | 1 cut(s) | 63 |
| BstKTI | GATC | 2 cut(s) | 136, 243 |
| BstMBI | GATC | 2 cut(s) | 133, 240 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 29 |
| BstSFI | CTRYAG | 1 cut(s) | 169 |
| BtgI | CCRYGG | 1 cut(s) | 161 |
| BtsCI | GGATG | 1 cut(s) | 63 |
| CciI | TCATGA | 1 cut(s) | 88 |
| Cfr10I | RCCGGY | 1 cut(s) | 95 |
| Cfr13I | GGNCC | 1 cut(s) | 158 |
| CseI | GACGC | 1 cut(s) | 101 |
| CviAII | CATG | 3 cut(s) | 89, 125, 162 |
| CviJI | RGCY | 2 cut(s) | 213, 248 |
| CviKI_1 | RGCY | 2 cut(s) | 213, 248 |
| DpnI | GATC | 2 cut(s) | 135, 242 |
| DpnII | GATC | 2 cut(s) | 133, 240 |
| Eco130I | CCWWGG | 1 cut(s) | 161 |
| Eco47I | GGWCC | 1 cut(s) | 158 |
| EcoT14I | CCWWGG | 1 cut(s) | 161 |
| ErhI | CCWWGG | 1 cut(s) | 161 |
| FaeI | CATG | 3 cut(s) | 92, 128, 165 |
| FaiI | YATR | 7 cut(s) | 26, 90, 126, 163, 171, 201, 235 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 46, 78 |
| FaqI | GGGAC | 1 cut(s) | 90 |
| FatI | CATG | 3 cut(s) | 88, 124, 161 |
| FokI | GGATG | 1 cut(s) | 70 |
| HapII | CCGG | 1 cut(s) | 96 |
| HgaI | GACGC | 1 cut(s) | 101 |
| Hin1I | GRCGYC | 1 cut(s) | 93 |
| Hin1II | CATG | 3 cut(s) | 92, 128, 165 |
| HinfI | GANTC | 3 cut(s) | 13, 47, 78 |
| HpaII | CCGG | 1 cut(s) | 96 |
| HphI | GGTGA | 1 cut(s) | 110 |
| Hpy188I | TCNGA | 1 cut(s) | 46 |
| Hpy188III | TCNNGA | 1 cut(s) | 89 |
| HpyCH4III | ACNGT | 1 cut(s) | 267 |
| HpyCH4V | TGCA | 1 cut(s) | 151 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 29 |
| Hsp92I | GRCGYC | 1 cut(s) | 93 |
| Hsp92II | CATG | 3 cut(s) | 92, 128, 165 |
| Kzo9I | GATC | 2 cut(s) | 133, 240 |
| LpnPI | CCDG | 3 cut(s) | 2, 109, 170 |
| LweI | GCATC | 1 cut(s) | 171 |
| MaeIII | GTNAC | 1 cut(s) | 98 |
| MalI | GATC | 2 cut(s) | 135, 242 |
| MboI | GATC | 2 cut(s) | 133, 240 |
| MboII | GAAGA | 1 cut(s) | 250 |
| MlyI | GAGTC | 1 cut(s) | 72 |
| MnlI | CCTC | 3 cut(s) | 121, 149, 238 |
| MspI | CCGG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 29 |
| NcoI | CCATGG | 1 cut(s) | 161 |
| NdeII | GATC | 2 cut(s) | 133, 240 |
| NlaIII | CATG | 3 cut(s) | 92, 128, 165 |
| NmuCI | GTSAC | 1 cut(s) | 98 |
| PagI | TCATGA | 1 cut(s) | 88 |
| PfeI | GAWTC | 2 cut(s) | 13, 47 |
| PleI | GAGTC | 1 cut(s) | 72 |
| PpsI | GAGTC | 1 cut(s) | 72 |
| PspPI | GGNCC | 1 cut(s) | 158 |
| Sau3AI | GATC | 2 cut(s) | 133, 240 |
| Sau96I | GGNCC | 1 cut(s) | 158 |
| SchI | GAGTC | 1 cut(s) | 72 |
| SetI | ASST | 1 cut(s) | 132 |
| SfaNI | GCATC | 1 cut(s) | 171 |
| SfcI | CTRYAG | 1 cut(s) | 169 |
| SgrAI | CRCCGGYG | 1 cut(s) | 95 |
| SinI | GGWCC | 1 cut(s) | 158 |
| SsiI | CCGC | 1 cut(s) | 71 |
| StyI | CCWWGG | 1 cut(s) | 161 |
| TaaI | ACNGT | 1 cut(s) | 267 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TfiI | GAWTC | 2 cut(s) | 13, 47 |
| TseFI | GTSAC | 1 cut(s) | 98 |
| Tsp45I | GTSAC | 1 cut(s) | 98 |
| TspDTI | ATGAA | 1 cut(s) | 77 |
| TspGWI | ACGGA | 2 cut(s) | 168, 219 |
| VpaK11BI | GGWCC | 1 cut(s) | 158 |