Pectate lyase superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0228731 RchiOBHm_Chr7g0228741 RchiOBHm_Chr7g0228761 |
| rosa_laevigata | RLG00000001545 |
| rosa_multiflora | Rmu_sc0004342.1_g000014 Rmu_sc0004342.1_g000015 Rmu_sc0016118.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00230900 |
| rosa_rugosa | Rorug04G0188600 |
| rosa_samantha | Rh7BG384500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 159 |
| AclWI | GGATC | 1 cut(s) | 43 |
| AfaI | GTAC | 1 cut(s) | 306 |
| AluBI | AGCT | 1 cut(s) | 109 |
| AluI | AGCT | 1 cut(s) | 109 |
| Alw26I | GTCTC | 2 cut(s) | 5, 90 |
| AlwI | GGATC | 1 cut(s) | 43 |
| ApeKI | GCWGC | 2 cut(s) | 198, 246 |
| AspLEI | GCGC | 1 cut(s) | 95 |
| BbvI | GCAGC | 2 cut(s) | 210, 233 |
| BcoDI | GTCTC | 2 cut(s) | 5, 90 |
| BfaI | CTAG | 1 cut(s) | 101 |
| BisI | GCNGC | 2 cut(s) | 199, 247 |
| BlsI | GCNGC | 2 cut(s) | 200, 248 |
| BmsI | GCATC | 2 cut(s) | 104, 270 |
| BoxI | GACNNNNGTC | 1 cut(s) | 17 |
| BpmI | CTGGAG | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 2 cut(s) | 241, 287 |
| Bse1I | ACTGG | 1 cut(s) | 19 |
| BseDI | CCNNGG | 2 cut(s) | 241, 287 |
| BseMII | CTCAG | 1 cut(s) | 101 |
| BseNI | ACTGG | 1 cut(s) | 19 |
| BseXI | GCAGC | 2 cut(s) | 210, 233 |
| BslFI | GGGAC | 3 cut(s) | 202, 282, 305 |
| BsmAI | GTCTC | 2 cut(s) | 5, 90 |
| BsmFI | GGGAC | 3 cut(s) | 202, 282, 305 |
| Bsp143I | GATC | 2 cut(s) | 35, 235 |
| Bsp19I | CCATGG | 1 cut(s) | 241 |
| BspCNI | CTCAG | 1 cut(s) | 102 |
| BspPI | GGATC | 1 cut(s) | 43 |
| BsrI | ACTGG | 1 cut(s) | 19 |
| BssECI | CCNNGG | 2 cut(s) | 241, 287 |
| BssMI | GATC | 2 cut(s) | 35, 235 |
| BssT1I | CCWWGG | 1 cut(s) | 241 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 296 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstDSI | CCRYGG | 2 cut(s) | 241, 287 |
| BstHHI | GCGC | 1 cut(s) | 95 |
| BstKTI | GATC | 2 cut(s) | 38, 238 |
| BstMAI | GTCTC | 2 cut(s) | 5, 90 |
| BstMBI | GATC | 2 cut(s) | 35, 235 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 17 |
| BstV1I | GCAGC | 2 cut(s) | 210, 233 |
| BstX2I | RGATCY | 1 cut(s) | 35 |
| BstYI | RGATCY | 1 cut(s) | 35 |
| BtgI | CCRYGG | 2 cut(s) | 241, 287 |
| BtsIMutI | CAGTG | 1 cut(s) | 307 |
| CfoI | GCGC | 1 cut(s) | 95 |
| Csp6I | GTAC | 1 cut(s) | 305 |
| CviAII | CATG | 4 cut(s) | 27, 230, 242, 256 |
| CviJI | RGCY | 3 cut(s) | 109, 224, 246 |
| CviKI_1 | RGCY | 3 cut(s) | 109, 224, 246 |
| CviQI | GTAC | 1 cut(s) | 305 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| DpnI | GATC | 2 cut(s) | 37, 237 |
| DpnII | GATC | 2 cut(s) | 35, 235 |
| Eco130I | CCWWGG | 1 cut(s) | 241 |
| EcoT14I | CCWWGG | 1 cut(s) | 241 |
| ErhI | CCWWGG | 1 cut(s) | 241 |
| FaeI | CATG | 4 cut(s) | 30, 233, 245, 259 |
| FaiI | YATR | 8 cut(s) | 28, 159, 184, 186, 231, 243, 257, 267 |
| FaqI | GGGAC | 3 cut(s) | 202, 282, 305 |
| FatI | CATG | 4 cut(s) | 26, 229, 241, 255 |
| FauNDI | CATATG | 1 cut(s) | 184 |
| Fnu4HI | GCNGC | 2 cut(s) | 199, 247 |
| Fsp4HI | GCNGC | 2 cut(s) | 199, 247 |
| FspBI | CTAG | 1 cut(s) | 101 |
| GlaI | GCGC | 1 cut(s) | 94 |
| GluI | GCNGC | 2 cut(s) | 199, 247 |
| GsuI | CTGGAG | 1 cut(s) | 36 |
| HhaI | GCGC | 1 cut(s) | 95 |
| Hin1II | CATG | 4 cut(s) | 30, 233, 245, 259 |
| Hin6I | GCGC | 1 cut(s) | 93 |
| HinP1I | GCGC | 1 cut(s) | 93 |
| HincII | GTYRAC | 1 cut(s) | 274 |
| HindII | GTYRAC | 1 cut(s) | 274 |
| HinfI | GANTC | 1 cut(s) | 18 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 274, 307 |
| Hpy188III | TCNNGA | 2 cut(s) | 22, 33 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 274, 307 |
| HpyAV | CCTTC | 1 cut(s) | 235 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 296 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92II | CATG | 4 cut(s) | 30, 233, 245, 259 |
| HspAI | GCGC | 1 cut(s) | 93 |
| Kzo9I | GATC | 2 cut(s) | 35, 235 |
| LmnI | GCTCC | 1 cut(s) | 289 |
| LpnPI | CCDG | 1 cut(s) | 18 |
| Lsp1109I | GCAGC | 2 cut(s) | 210, 233 |
| LweI | GCATC | 2 cut(s) | 104, 270 |
| MaeI | CTAG | 1 cut(s) | 101 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 1 cut(s) | 113 |
| MalI | GATC | 2 cut(s) | 37, 237 |
| MboI | GATC | 2 cut(s) | 35, 235 |
| MboII | GAAGA | 3 cut(s) | 145, 148, 151 |
| MflI | RGATCY | 1 cut(s) | 35 |
| MluCI | AATT | 1 cut(s) | 58 |
| MlyI | GAGTC | 1 cut(s) | 27 |
| MnlI | CCTC | 1 cut(s) | 64 |
| MseI | TTAA | 2 cut(s) | 57, 80 |
| MslI | CAYNNNNRTG | 1 cut(s) | 80 |
| NcoI | CCATGG | 1 cut(s) | 241 |
| NdeI | CATATG | 1 cut(s) | 184 |
| NdeII | GATC | 2 cut(s) | 35, 235 |
| NlaIII | CATG | 4 cut(s) | 30, 233, 245, 259 |
| NmuCI | GTSAC | 1 cut(s) | 113 |
| PflFI | GACNNNGTC | 1 cut(s) | 28 |
| PkrI | GCNGC | 2 cut(s) | 200, 248 |
| PleI | GAGTC | 1 cut(s) | 26 |
| PpsI | GAGTC | 1 cut(s) | 26 |
| PshAI | GACNNNNGTC | 1 cut(s) | 17 |
| PsiI | TTATAA | 1 cut(s) | 159 |
| PsuI | RGATCY | 1 cut(s) | 35 |
| PsyI | GACNNNGTC | 1 cut(s) | 28 |
| RsaI | GTAC | 1 cut(s) | 306 |
| RsaNI | GTAC | 1 cut(s) | 305 |
| RseI | CAYNNNNRTG | 1 cut(s) | 80 |
| SaqAI | TTAA | 2 cut(s) | 57, 80 |
| SatI | GCNGC | 2 cut(s) | 199, 247 |
| Sau3AI | GATC | 2 cut(s) | 35, 235 |
| SchI | GAGTC | 1 cut(s) | 27 |
| SetI | ASST | 2 cut(s) | 111, 306 |
| SfaNI | GCATC | 2 cut(s) | 104, 270 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 80 |
| Sse9I | AATT | 1 cut(s) | 58 |
| SspMI | CTAG | 1 cut(s) | 101 |
| StyI | CCWWGG | 1 cut(s) | 241 |
| TaaI | ACNGT | 2 cut(s) | 43, 296 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TasI | AATT | 1 cut(s) | 58 |
| Tru1I | TTAA | 2 cut(s) | 57, 80 |
| Tru9I | TTAA | 2 cut(s) | 57, 80 |
| TseFI | GTSAC | 1 cut(s) | 113 |
| TseI | GCWGC | 2 cut(s) | 198, 246 |
| Tsp45I | GTSAC | 1 cut(s) | 113 |
| TspGWI | ACGGA | 1 cut(s) | 276 |
| Tth111I | GACNNNGTC | 1 cut(s) | 28 |
| XspI | CTAG | 1 cut(s) | 101 |