Sieve element occlusion C-terminus
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67790 |
| fragaria_vesca | FvH4_4g25330 FvH4_7g07630 |
| malus_domestica | MD16G1104700.v1.1 |
| prunus_persica | Prupe.1G241600_v2.0.a1 Prupe.1G241600_v2.0.a1 |
| pyrus_communis | pycom16g08930 |
| rosa_chinensis | RchiOBHm_Chr4g0432621 |
| rosa_laevigata | RLG00000006829 |
| rosa_multiflora | Rmu_co8424631.1_g000001 Rmu_sc0004612.1_g000008 Rmu_sc0009665.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00374080 |
| rosa_rugosa | Rorug04G0260600.1 Rorug04G0260700.1 |
| rosa_samantha | Rh4AG315500 Rh4BG323300 Rh4CG338400 Rh4DG318900 |
| rosa_wichuraiana | Rw4G027430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 327, 1508, 1628 |
| AarI | CACCTGC | 1 cut(s) | 772 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1932, 1946 |
| Acc16I | TGCGCA | 1 cut(s) | 755 |
| Acc36I | ACCTGC | 1 cut(s) | 772 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1110, 1984 |
| AccBSI | CCGCTC | 1 cut(s) | 220 |
| AccI | GTMKAC | 1 cut(s) | 624 |
| AciI | CCGC | 3 cut(s) | 26, 218, 557 |
| AcsI | RAATTY | 4 cut(s) | 181, 703, 1484, 1897 |
| AcuI | CTGAAG | 1 cut(s) | 974 |
| AfaI | GTAC | 4 cut(s) | 151, 354, 1166, 1293 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1110, 1853, 1984 |
| AflII | CTTAAG | 2 cut(s) | 443, 733 |
| AflIII | ACRYGT | 3 cut(s) | 565, 1299, 1839 |
| AgsI | TTSAA | 7 cut(s) | 475, 548, 702, 708, 984, 1344, 1907 |
| AjnI | CCWGG | 3 cut(s) | 843, 1181, 1586 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 858, 890 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1959, 1991 |
| Alw21I | GWGCWC | 1 cut(s) | 1891 |
| Alw26I | GTCTC | 1 cut(s) | 803 |
| Alw44I | GTGCAC | 1 cut(s) | 1887 |
| AoxI | GGCC | 4 cut(s) | 266, 489, 986, 1814 |
| ApaLI | GTGCAC | 1 cut(s) | 1887 |
| ApeKI | GCWGC | 4 cut(s) | 400, 751, 756, 1654 |
| ApoI | RAATTY | 4 cut(s) | 181, 703, 1484, 1897 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 117, 165, 839, 2021 |
| AspLEI | GCGC | 2 cut(s) | 656, 756 |
| AspS9I | GGNCC | 5 cut(s) | 871, 1113, 1377, 1814, 1925 |
| AsuHPI | GGTGA | 1 cut(s) | 392 |
| AvaII | GGWCC | 4 cut(s) | 871, 1113, 1377, 1925 |
| BaeGI | GKGCMC | 1 cut(s) | 1891 |
| BamHI | GGATCC | 2 cut(s) | 1086, 1476 |
| BbsI | GAAGAC | 1 cut(s) | 832 |
| Bbv12I | GWGCWC | 1 cut(s) | 1891 |
| BbvI | GCAGC | 4 cut(s) | 412, 738, 768, 1641 |
| BccI | CCATC | 5 cut(s) | 86, 1492, 1528, 1739, 1918 |
| BciT130I | CCWGG | 3 cut(s) | 845, 1183, 1588 |
| BclI | TGATCA | 2 cut(s) | 271, 1594 |
| BcoDI | GTCTC | 1 cut(s) | 803 |
| BfaI | CTAG | 8 cut(s) | 411, 1061, 1481, 1685, 1715, 1736, 1959, 1970 |
| BfmI | CTRYAG | 1 cut(s) | 153 |
| BfrI | CTTAAG | 2 cut(s) | 443, 733 |
| BfuAI | ACCTGC | 1 cut(s) | 772 |
| BisI | GCNGC | 5 cut(s) | 26, 401, 752, 757, 1655 |
| BlpI | GCTNAGC | 1 cut(s) | 77 |
| BlsI | GCNGC | 5 cut(s) | 27, 402, 753, 758, 1656 |
| BmcAI | AGTACT | 1 cut(s) | 354 |
| Bme1390I | CCNGG | 3 cut(s) | 845, 1183, 1588 |
| Bme18I | GGWCC | 4 cut(s) | 871, 1113, 1377, 1925 |
| BmgT120I | GGNCC | 5 cut(s) | 871, 1113, 1377, 1814, 1925 |
| BmiI | GGNNCC | 4 cut(s) | 392, 1088, 1242, 1478 |
| BmrFI | CCNGG | 3 cut(s) | 845, 1183, 1588 |
| BmrI | ACTGGG | 1 cut(s) | 1771 |
| BmsI | GCATC | 7 cut(s) | 325, 368, 641, 651, 1114, 1387, 1458 |
| BmuI | ACTGGG | 1 cut(s) | 1771 |
| BoxI | GACNNNNGTC | 1 cut(s) | 465 |
| BpiI | GAAGAC | 1 cut(s) | 832 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1649 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 77 |
| BpuEI | CTTGAG | 7 cut(s) | 514, 667, 837, 896, 1543, 1550, 1903 |
| BsaJI | CCNNGG | 6 cut(s) | 420, 1160, 1181, 1587, 1791, 1978 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1959, 1989 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1110, 1853, 1984 |
| Bse118I | RCCGGY | 1 cut(s) | 1243 |
| Bse1I | ACTGG | 6 cut(s) | 632, 1097, 1104, 1379, 1495, 1766 |
| Bse3DI | GCAATG | 2 cut(s) | 519, 1320 |
| BseBI | CCWGG | 3 cut(s) | 845, 1183, 1588 |
| BseDI | CCNNGG | 6 cut(s) | 420, 1160, 1181, 1587, 1791, 1978 |
| BseGI | GGATG | 5 cut(s) | 340, 526, 904, 1042, 1750 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1110, 1853, 1984 |
| BseMI | GCAATG | 2 cut(s) | 519, 1320 |
| BseMII | CTCAG | 4 cut(s) | 91, 681, 787, 1209 |
| BseNI | ACTGG | 6 cut(s) | 632, 1097, 1104, 1379, 1495, 1766 |
| BseSI | GKGCMC | 1 cut(s) | 1891 |
| BseXI | GCAGC | 4 cut(s) | 412, 738, 768, 1641 |
| BsgI | GTGCAG | 2 cut(s) | 147, 1536 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1248 |
| BshFI | GGCC | 4 cut(s) | 268, 491, 988, 1816 |
| BsiEI | CGRYCG | 1 cut(s) | 1248 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1891 |
| BsiSI | CCGG | 2 cut(s) | 1244, 1694 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1110, 1853, 1984 |
| BsmAI | GTCTC | 1 cut(s) | 803 |
| BsmI | GAATGC | 3 cut(s) | 514, 598, 1835 |
| BsnI | GGCC | 4 cut(s) | 268, 491, 988, 1816 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1891 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 77 |
| Bsp19I | CCATGG | 1 cut(s) | 1791 |
| BspACI | CCGC | 3 cut(s) | 26, 218, 557 |
| BspANI | GGCC | 4 cut(s) | 268, 491, 988, 1816 |
| BspCNI | CTCAG | 4 cut(s) | 90, 682, 786, 1208 |
| BspHI | TCATGA | 1 cut(s) | 1936 |
| BspLI | GGNNCC | 4 cut(s) | 392, 1088, 1242, 1478 |
| BspMI | ACCTGC | 1 cut(s) | 772 |
| BspTI | CTTAAG | 2 cut(s) | 443, 733 |
| BsrBI | CCGCTC | 1 cut(s) | 220 |
| BsrDI | GCAATG | 2 cut(s) | 519, 1320 |
| BsrFI | RCCGGY | 1 cut(s) | 1243 |
| BsrI | ACTGG | 6 cut(s) | 632, 1097, 1104, 1379, 1495, 1766 |
| BssAI | RCCGGY | 1 cut(s) | 1243 |
| BssECI | CCNNGG | 6 cut(s) | 420, 1160, 1181, 1587, 1791, 1978 |
| BssT1I | CCWWGG | 4 cut(s) | 420, 1160, 1791, 1978 |
| Bst2UI | CCWGG | 3 cut(s) | 845, 1183, 1588 |
| Bst4CI | ACNGT | 2 cut(s) | 380, 767 |
| BstAFI | CTTAAG | 2 cut(s) | 443, 733 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 593 |
| BstC8I | GCNNGC | 1 cut(s) | 456 |
| BstDEI | CTNAG | 6 cut(s) | 77, 690, 773, 1195, 1649, 1892 |
| BstDSI | CCRYGG | 1 cut(s) | 1791 |
| BstF5I | GGATG | 5 cut(s) | 340, 526, 904, 1042, 1750 |
| BstHHI | GCGC | 2 cut(s) | 656, 756 |
| BstMAI | GTCTC | 1 cut(s) | 803 |
| BstMCI | CGRYCG | 1 cut(s) | 1248 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 397, 593, 1205, 1654 |
| BstNI | CCWGG | 3 cut(s) | 845, 1183, 1588 |
| BstNSI | RCATGY | 3 cut(s) | 569, 1303, 1843 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 465 |
| BstSCI | CCNGG | 3 cut(s) | 843, 1181, 1586 |
| BstSFI | CTRYAG | 1 cut(s) | 153 |
| BstSLI | GKGCMC | 1 cut(s) | 1891 |
| BstV1I | GCAGC | 4 cut(s) | 412, 738, 768, 1641 |
| BstV2I | GAAGAC | 1 cut(s) | 832 |
| BstX2I | RGATCY | 4 cut(s) | 280, 1086, 1476, 1781 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1798 |
| BstYI | RGATCY | 4 cut(s) | 280, 1086, 1476, 1781 |
| BsuRI | GGCC | 4 cut(s) | 268, 491, 988, 1816 |
| BtgI | CCRYGG | 1 cut(s) | 1791 |
| BtsCI | GGATG | 5 cut(s) | 340, 526, 904, 1042, 1750 |
| BtsI | GCAGTG | 5 cut(s) | 135, 1116, 1206, 1618, 1730 |
| BtsIMutI | CAGTG | 6 cut(s) | 135, 1116, 1206, 1488, 1618, 1730 |
| BveI | ACCTGC | 1 cut(s) | 772 |
| Cac8I | GCNNGC | 1 cut(s) | 456 |
| CciI | TCATGA | 1 cut(s) | 1936 |
| CfoI | GCGC | 2 cut(s) | 656, 756 |
| Cfr10I | RCCGGY | 1 cut(s) | 1243 |
| Cfr13I | GGNCC | 5 cut(s) | 871, 1113, 1377, 1814, 1925 |
| Csp6I | GTAC | 4 cut(s) | 150, 353, 1165, 1292 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1837, 1872 |
| CviQI | GTAC | 4 cut(s) | 150, 353, 1165, 1292 |
| DdeI | CTNAG | 6 cut(s) | 77, 690, 773, 1195, 1649, 1892 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1932, 1946 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1932, 1946 |
| Eco130I | CCWWGG | 4 cut(s) | 420, 1160, 1791, 1978 |
| Eco147I | AGGCCT | 1 cut(s) | 491 |
| Eco47I | GGWCC | 4 cut(s) | 871, 1113, 1377, 1925 |
| Eco57I | CTGAAG | 1 cut(s) | 974 |
| EcoO109I | RGGNCCY | 1 cut(s) | 871 |
| EcoRI | GAATTC | 1 cut(s) | 1484 |
| EcoRII | CCWGG | 3 cut(s) | 843, 1181, 1586 |
| EcoT14I | CCWWGG | 4 cut(s) | 420, 1160, 1791, 1978 |
| ErhI | CCWWGG | 4 cut(s) | 420, 1160, 1791, 1978 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 858, 890, 905, 937, 921, 953 |
| FbaI | TGATCA | 2 cut(s) | 271, 1594 |
| FblI | GTMKAC | 1 cut(s) | 624 |
| Fnu4HI | GCNGC | 5 cut(s) | 26, 401, 752, 757, 1655 |
| FokI | GGATG | 5 cut(s) | 347, 533, 911, 1029, 1757 |
| Fsp4HI | GCNGC | 5 cut(s) | 26, 401, 752, 757, 1655 |
| FspBI | CTAG | 8 cut(s) | 411, 1061, 1481, 1685, 1715, 1736, 1959, 1970 |
| FspI | TGCGCA | 1 cut(s) | 755 |
| GlaI | GCGC | 2 cut(s) | 655, 755 |
| GluI | GCNGC | 5 cut(s) | 26, 401, 752, 757, 1655 |
| HaeIII | GGCC | 4 cut(s) | 268, 491, 988, 1816 |
| HapII | CCGG | 2 cut(s) | 1244, 1694 |
| HhaI | GCGC | 2 cut(s) | 656, 756 |
| Hin6I | GCGC | 2 cut(s) | 654, 754 |
| HinP1I | GCGC | 2 cut(s) | 654, 754 |
| HincII | GTYRAC | 1 cut(s) | 1565 |
| HindII | GTYRAC | 1 cut(s) | 1565 |
| HindIII | AAGCTT | 1 cut(s) | 935 |
| HinfI | GANTC | 5 cut(s) | 107, 466, 671, 879, 1262 |
| HpaII | CCGG | 2 cut(s) | 1244, 1694 |
| HphI | GGTGA | 1 cut(s) | 392 |
| Hpy166II | GTNNAC | 4 cut(s) | 625, 859, 1565, 1889 |
| Hpy188I | TCNGA | 8 cut(s) | 112, 224, 684, 691, 776, 949, 954, 1682 |
| Hpy8I | GTNNAC | 4 cut(s) | 625, 859, 1565, 1889 |
| HpyAV | CCTTC | 4 cut(s) | 28, 241, 884, 949 |
| HpyCH4III | ACNGT | 2 cut(s) | 380, 767 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 397, 593, 1205, 1654 |
| HpyF3I | CTNAG | 6 cut(s) | 77, 690, 773, 1195, 1649, 1892 |
| HspAI | GCGC | 2 cut(s) | 654, 754 |
| Ksp22I | TGATCA | 2 cut(s) | 271, 1594 |
| LmnI | GCTCC | 2 cut(s) | 396, 1240 |
| Lsp1109I | GCAGC | 4 cut(s) | 412, 738, 768, 1641 |
| LweI | GCATC | 7 cut(s) | 325, 368, 641, 651, 1114, 1387, 1458 |
| MaeI | CTAG | 8 cut(s) | 411, 1061, 1481, 1685, 1715, 1736, 1959, 1970 |
| MaeIII | GTNAC | 8 cut(s) | 374, 413, 433, 523, 1070, 1276, 1302, 1948 |
| MbiI | CCGCTC | 1 cut(s) | 220 |
| MfeI | CAATTG | 1 cut(s) | 1637 |
| MflI | RGATCY | 4 cut(s) | 280, 1086, 1476, 1781 |
| MhlI | GDGCHC | 1 cut(s) | 1891 |
| MlyI | GAGTC | 2 cut(s) | 475, 665 |
| MmeI | TCCRAC | 4 cut(s) | 184, 555, 1239, 1705 |
| MroXI | GAANNNNTTC | 4 cut(s) | 117, 165, 839, 2021 |
| MseI | TTAA | 8 cut(s) | 63, 444, 486, 734, 1215, 1583, 1607, 1809 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1796, 1941 |
| MspA1I | CMGCKG | 1 cut(s) | 751 |
| MspCI | CTTAAG | 2 cut(s) | 443, 733 |
| MspI | CCGG | 2 cut(s) | 1244, 1694 |
| MspR9I | CCNGG | 3 cut(s) | 845, 1183, 1588 |
| MunI | CAATTG | 1 cut(s) | 1637 |
| Mva1269I | GAATGC | 3 cut(s) | 514, 598, 1835 |
| MvaI | CCWGG | 3 cut(s) | 845, 1183, 1588 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 397, 593, 1205, 1654 |
| NcoI | CCATGG | 1 cut(s) | 1791 |
| NlaIV | GGNNCC | 4 cut(s) | 392, 1088, 1242, 1478 |
| NmuCI | GTSAC | 3 cut(s) | 433, 1276, 1948 |
| NsbI | TGCGCA | 1 cut(s) | 755 |
| NspI | RCATGY | 3 cut(s) | 569, 1303, 1843 |
| PagI | TCATGA | 1 cut(s) | 1936 |
| PaqCI | CACCTGC | 1 cut(s) | 772 |
| PceI | AGGCCT | 1 cut(s) | 491 |
| PciI | ACATGT | 3 cut(s) | 565, 1299, 1839 |
| PctI | GAATGC | 3 cut(s) | 514, 598, 1835 |
| PdmI | GAANNNNTTC | 4 cut(s) | 117, 165, 839, 2021 |
| PfeI | GAWTC | 3 cut(s) | 107, 879, 1262 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1110, 1984 |
| PfoI | TCCNGGA | 1 cut(s) | 843 |
| PkrI | GCNGC | 5 cut(s) | 27, 402, 753, 758, 1656 |
| PleI | GAGTC | 2 cut(s) | 474, 665 |
| PpsI | GAGTC | 2 cut(s) | 474, 665 |
| PpuMI | RGGWCCY | 1 cut(s) | 871 |
| PscI | ACATGT | 3 cut(s) | 565, 1299, 1839 |
| PshAI | GACNNNNGTC | 1 cut(s) | 465 |
| PsiI | TTATAA | 3 cut(s) | 327, 1508, 1628 |
| Psp5II | RGGWCCY | 1 cut(s) | 871 |
| Psp6I | CCWGG | 3 cut(s) | 843, 1181, 1586 |
| PspGI | CCWGG | 3 cut(s) | 843, 1181, 1586 |
| PspN4I | GGNNCC | 4 cut(s) | 392, 1088, 1242, 1478 |
| PspPI | GGNCC | 5 cut(s) | 871, 1113, 1377, 1814, 1925 |
| PspPPI | RGGWCCY | 1 cut(s) | 871 |
| PsuI | RGATCY | 4 cut(s) | 280, 1086, 1476, 1781 |
| PvuII | CAGCTG | 1 cut(s) | 751 |
| RsaI | GTAC | 4 cut(s) | 151, 354, 1166, 1293 |
| RsaNI | GTAC | 4 cut(s) | 150, 353, 1165, 1292 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1796, 1941 |
| SaqAI | TTAA | 8 cut(s) | 63, 444, 486, 734, 1215, 1583, 1607, 1809 |
| SatI | GCNGC | 5 cut(s) | 26, 401, 752, 757, 1655 |
| Sau96I | GGNCC | 5 cut(s) | 871, 1113, 1377, 1814, 1925 |
| ScaI | AGTACT | 1 cut(s) | 354 |
| SchI | GAGTC | 2 cut(s) | 475, 665 |
| ScrFI | CCNGG | 3 cut(s) | 845, 1183, 1588 |
| SduI | GDGCHC | 1 cut(s) | 1891 |
| SfaNI | GCATC | 7 cut(s) | 325, 368, 641, 651, 1114, 1387, 1458 |
| SfcI | CTRYAG | 1 cut(s) | 153 |
| SinI | GGWCC | 4 cut(s) | 871, 1113, 1377, 1925 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1796, 1941 |
| SmlI | CTYRAG | 9 cut(s) | 443, 493, 646, 733, 852, 911, 1529, 1558, 1882 |
| SmoI | CTYRAG | 9 cut(s) | 443, 493, 646, 733, 852, 911, 1529, 1558, 1882 |
| SseBI | AGGCCT | 1 cut(s) | 491 |
| SsiI | CCGC | 3 cut(s) | 26, 218, 557 |
| SspI | AATATT | 2 cut(s) | 698, 1444 |
| SspMI | CTAG | 8 cut(s) | 411, 1061, 1481, 1685, 1715, 1736, 1959, 1970 |
| StuI | AGGCCT | 1 cut(s) | 491 |
| StyD4I | CCNGG | 3 cut(s) | 843, 1181, 1586 |
| StyI | CCWWGG | 4 cut(s) | 420, 1160, 1791, 1978 |
| TaaI | ACNGT | 2 cut(s) | 380, 767 |
| TaqI | TCGA | 3 cut(s) | 481, 877, 1001 |
| TatI | WGTACW | 3 cut(s) | 149, 352, 1291 |
| TauI | GCSGC | 1 cut(s) | 28 |
| TfiI | GAWTC | 3 cut(s) | 107, 879, 1262 |
| Tru1I | TTAA | 8 cut(s) | 63, 444, 486, 734, 1215, 1583, 1607, 1809 |
| Tru9I | TTAA | 8 cut(s) | 63, 444, 486, 734, 1215, 1583, 1607, 1809 |
| TscAI | CASTG | 6 cut(s) | 135, 1123, 1206, 1495, 1618, 1737 |
| TseFI | GTSAC | 3 cut(s) | 433, 1276, 1948 |
| TseI | GCWGC | 4 cut(s) | 400, 751, 756, 1654 |
| Tsp45I | GTSAC | 3 cut(s) | 433, 1276, 1948 |
| TspDTI | ATGAA | 2 cut(s) | 848, 2030 |
| TspRI | CASTG | 6 cut(s) | 135, 1123, 1206, 1495, 1618, 1737 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1110, 1984 |
| Vha464I | CTTAAG | 2 cut(s) | 443, 733 |
| VneI | GTGCAC | 1 cut(s) | 1887 |
| VpaK11BI | GGWCC | 4 cut(s) | 871, 1113, 1377, 1925 |
| XapI | RAATTY | 4 cut(s) | 181, 703, 1484, 1897 |
| XbaI | TCTAGA | 1 cut(s) | 1714 |
| XceI | RCATGY | 3 cut(s) | 569, 1303, 1843 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 89 |
| XmiI | GTMKAC | 1 cut(s) | 624 |
| XmnI | GAANNNNTTC | 4 cut(s) | 117, 165, 839, 2021 |
| XspI | CTAG | 8 cut(s) | 411, 1061, 1481, 1685, 1715, 1736, 1959, 1970 |
| ZrmI | AGTACT | 1 cut(s) | 354 |