Rmu_sc0004832.1_g000009

beta-glucosidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004832.1
Physical Location & Seq
Reverse (-)
27328 .. 37660
10333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004832.1_g000009.1.cds

Sequence Viewer

Length: 1470 bp
atggctaggatggagttcttaaaggaatatgaacaggcagatgaagtctctcgcagtggattccctcctaacttcgtctttggcgttgccacttccgcctatcaggttgaaggagcctgcaaggacggcggcaggggtcctagtatctgggatgcttttacacacactaaaggcaagatcattgatggaagcaatggtgacatttctgtggatcaatatcatcggtataaggaagatgttgatctcattgccaagttgggatttgatgcttatcggttttccatatcatggtctcgaatcttccctgatggtctaggaaccaaagtcaatgaagatgggattgcttactacaacaatgtcattaatgctctcctggaaaaaggcattcagccttatgtaacactgtaccattgggatctaccattgtaccttcatgaaagtatgggaggatggttaaacaagcagattgtaaaatacttctcagcctatgcagacacctgctttgcaagttttggcgatagagtaaagcactggatcacaattaatgagcctcttcaaacttccgtcaatggttacggtttcgggatatttgctcccggaagacatgaacatgcatctacagaaccatatttggttgcgcaccatcaactgttggcccatgctgctgctgtttccatatatcgaagcaagtataaggacaagcaaggtggacaagtagggttgacagtagactgtgaatgggcagaggctaattcagataaaattgaagacaaaattgctgcagcaaggcgcctagattttcagcttggatggtacttagatccaatatattctggagaatatcccaaagttatgcgtgaacgacttggagatcggcttcccatattttcagaggatgataaggatttgctcaagaactcattggactttgttggtctgaatcactatacatcaagatttattgctcatgtaaaaaacagccccgaggagggtgatttttataaagcacaagagatggagaggatcgataaatgggaaggaggtgagattattggcgagaaggcagcatcagaatggctttatgttgttccctggggcatccacaaggtcctgaattacatagcacagagatacaatagtccaccgatatatattactgagaatggtatggatgatgaggataatgactcctccccacttcatgaaatactagatgacaaactgagagttagttattttaagagataccttgcagcggtcggaaatgcaatgagggatggagcagatgtgaggggatactttgcatggtcattactggataactttgagtgggctcaaggctacaccaagcgctttggtttggtttacattgactacaagaatgggctctcccggcacccaaaatcttctgcatactggttcttgcggttcttgaaaggtggtgaagggaaagatggcaaggatgaataa

Protein Analysis

489

Amino Acids

55.84

Weight (kDa)

5.52

Isoelectric Point (pI)

24.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1002
AarI CACCTGC 1 cut(s) 506
Acc16I TGCGCA 1 cut(s) 639
Acc36I ACCTGC 1 cut(s) 506
AccB1I GGYRCC 2 cut(s) 789, 1395
AccB7I CCANNNNNTGG 1 cut(s) 288
AccI GTMKAC 1 cut(s) 729
AciI CCGC 4 cut(s) 96, 129, 1256, 1426
AclWI GGATC 5 cut(s) 219, 423, 542, 815, 1031
AcyI GRCGYC 1 cut(s) 790
AfaI GTAC 3 cut(s) 407, 428, 815
AfeI AGCGCT 1 cut(s) 1352
AfiI CCNNNNNNNGG 4 cut(s) 288, 988, 989, 1255
AgsI TTSAA 4 cut(s) 110, 557, 767, 1435
AjnI CCWGG 2 cut(s) 372, 1091
AluBI AGCT 1 cut(s) 805
AluI AGCT 1 cut(s) 805
Alw26I GTCTC 2 cut(s) 52, 297
AlwI GGATC 5 cut(s) 219, 423, 542, 815, 1031
Ama87I CYCGRG 1 cut(s) 983
Aor51HI AGCGCT 1 cut(s) 1352
AoxI GGCC 1 cut(s) 654
ApeKI GCWGC 6 cut(s) 662, 665, 779, 782, 1064, 1253
ArsI GACNNNNNNTTYG 2 cut(s) 485, 517
AseI ATTAAT 2 cut(s) 363, 543
AspLEI GCGC 3 cut(s) 640, 792, 1353
AspS9I GGNCC 3 cut(s) 137, 655, 1108
AsuC2I CCSGG 2 cut(s) 597, 1393
AsuHPI GGTGA 4 cut(s) 209, 1004, 1055, 1454
AvaI CYCGRG 1 cut(s) 983
AvaII GGWCC 2 cut(s) 137, 1108
BaeI ACNNNNGTAYC 4 cut(s) 410, 443, 1123, 1156
BanI GGYRCC 2 cut(s) 789, 1395
BanII GRGCYC 2 cut(s) 1336, 1389
BbsI GAAGAC 2 cut(s) 607, 774
BbvI GCAGC 6 cut(s) 649, 652, 766, 794, 1076, 1265
BceAI ACGGC 1 cut(s) 142
BciT130I CCWGG 2 cut(s) 374, 1093
BciVI GTATCC 1 cut(s) 1289
BcnI CCSGG 2 cut(s) 597, 1393
BcoDI GTCTC 2 cut(s) 52, 297
BfaI CTAG 5 cut(s) 6, 141, 314, 794, 1211
BfmI CTRYAG 2 cut(s) 618, 780
BfoI RGCGCY 2 cut(s) 793, 1354
BfuAI ACCTGC 1 cut(s) 506
BfuI GTATCC 1 cut(s) 1289
BisI GCNGC 7 cut(s) 130, 663, 666, 780, 783, 1065, 1254
BlsI GCNGC 7 cut(s) 131, 664, 667, 781, 784, 1066, 1255
Bme1390I CCNGG 4 cut(s) 374, 597, 1093, 1393
Bme18I GGWCC 2 cut(s) 137, 1108
BmeT110I CYCGRG 1 cut(s) 983
BmgT120I GGNCC 3 cut(s) 137, 655, 1108
BmiI GGNNCC 5 cut(s) 115, 138, 319, 791, 1397
BmrFI CCNGG 4 cut(s) 374, 597, 1093, 1393
BmsI GCATC 5 cut(s) 142, 256, 623, 1076, 1107
BpiI GAAGAC 2 cut(s) 607, 774
BpmI CTGGAG 1 cut(s) 855
BpuEI CTTGAG 2 cut(s) 896, 1320
BpuMI CCSGG 2 cut(s) 597, 1393
Bsa29I ATCGAT 1 cut(s) 1026
BsaBI GATNNNNATC 3 cut(s) 216, 240, 270
BsaHI GRCGYC 1 cut(s) 790
BsaI GGTCTC 1 cut(s) 297
BsaJI CCNNGG 3 cut(s) 984, 1091, 1092
BsaXI ACNNNNNCTCC 2 cut(s) 1272, 1302
Bsc4I CCNNNNNNNGG 4 cut(s) 288, 988, 989, 1255
Bse1I ACTGG 3 cut(s) 536, 1320, 1421
Bse3DI GCAATG 3 cut(s) 199, 246, 1275
Bse8I GATNNNNATC 3 cut(s) 216, 240, 270
BseBI CCWGG 2 cut(s) 374, 1093
BseCI ATCGAT 1 cut(s) 1026
BseDI CCNNGG 3 cut(s) 984, 1091, 1092
BseGI GGATG 9 cut(s) 15, 157, 455, 815, 901, 1098, 1177, 1282, 1468
BseJI GATNNNNATC 3 cut(s) 216, 240, 270
BseLI CCNNNNNNNGG 4 cut(s) 288, 988, 989, 1255
BseMI GCAATG 3 cut(s) 199, 246, 1275
BseMII CTCAG 3 cut(s) 495, 1149, 1214
BseNI ACTGG 3 cut(s) 536, 1320, 1421
BseRI GAGGAG 2 cut(s) 1001, 1180
BseXI GCAGC 6 cut(s) 649, 652, 766, 794, 1076, 1265
Bsh1285I CGRYCG 1 cut(s) 1260
BshFI GGCC 1 cut(s) 656
BshNI GGYRCC 2 cut(s) 789, 1395
BshVI ATCGAT 1 cut(s) 1026
BsiEI CGRYCG 1 cut(s) 1260
BsiHKCI CYCGRG 1 cut(s) 983
BsiSI CCGG 2 cut(s) 597, 1393
BslI CCNNNNNNNGG 4 cut(s) 288, 988, 989, 1255
BsmAI GTCTC 2 cut(s) 52, 297
BsmI GAATGC 1 cut(s) 384
BsnI GGCC 1 cut(s) 656
Bso31I GGTCTC 1 cut(s) 297
BsoBI CYCGRG 1 cut(s) 983
Bsp1286I GDGCHC 2 cut(s) 1336, 1389
Bsp143I GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
BspACI CCGC 4 cut(s) 96, 129, 1256, 1426
BspANI GGCC 1 cut(s) 656
BspCNI CTCAG 3 cut(s) 494, 1150, 1215
BspDI ATCGAT 1 cut(s) 1026
BspHI TCATGA 2 cut(s) 433, 1201
BspLI GGNNCC 5 cut(s) 115, 138, 319, 791, 1397
BspMAI CTGCAG 1 cut(s) 784
BspMI ACCTGC 1 cut(s) 506
BspPI GGATC 5 cut(s) 219, 423, 542, 815, 1031
BspT107I GGYRCC 2 cut(s) 789, 1395
BspTNI GGTCTC 1 cut(s) 297
BsrDI GCAATG 3 cut(s) 199, 246, 1275
BsrI ACTGG 3 cut(s) 536, 1320, 1421
BssECI CCNNGG 3 cut(s) 984, 1091, 1092
BssMI GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
BssNI GRCGYC 1 cut(s) 790
Bst2UI CCWGG 2 cut(s) 374, 1093
Bst4CI ACNGT 5 cut(s) 405, 578, 651, 727, 734
Bst6I CTCTTC 1 cut(s) 558
BstACI GRCGYC 1 cut(s) 790
BstC8I GCNNGC 1 cut(s) 118
BstDEI CTNAG 4 cut(s) 481, 817, 1158, 1223
BstF5I GGATG 9 cut(s) 15, 157, 455, 815, 901, 1098, 1177, 1282, 1468
BstH2I RGCGCY 2 cut(s) 793, 1354
BstHHI GCGC 3 cut(s) 640, 792, 1353
BstKTI GATC 8 cut(s) 180, 214, 244, 418, 537, 823, 874, 1026
BstMAI GTCTC 2 cut(s) 52, 297
BstMBI GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
BstMCI CGRYCG 1 cut(s) 1260
BstMWI GCNNNNNNNGC 4 cut(s) 95, 126, 662, 1393
BstNI CCWGG 2 cut(s) 374, 1093
BstNSI RCATGY 1 cut(s) 614
BstSCI CCNGG 4 cut(s) 372, 595, 1091, 1391
BstSFI CTRYAG 2 cut(s) 618, 780
BstV1I GCAGC 6 cut(s) 649, 652, 766, 794, 1076, 1265
BstV2I GAAGAC 2 cut(s) 607, 774
BstX2I RGATCY 2 cut(s) 415, 820
BstYI RGATCY 2 cut(s) 415, 820
Bsu15I ATCGAT 1 cut(s) 1026
BsuI GTATCC 1 cut(s) 1289
BsuRI GGCC 1 cut(s) 656
BsuTUI ATCGAT 1 cut(s) 1026
BtsCI GGATG 9 cut(s) 15, 157, 455, 815, 901, 1098, 1177, 1282, 1468
BtsI GCAGTG 1 cut(s) 61
BtsIMutI CAGTG 3 cut(s) 61, 401, 529
BveI ACCTGC 1 cut(s) 506
Cac8I GCNNGC 1 cut(s) 118
CciI TCATGA 2 cut(s) 433, 1201
CfoI GCGC 3 cut(s) 640, 792, 1353
Cfr13I GGNCC 3 cut(s) 137, 655, 1108
ClaI ATCGAT 1 cut(s) 1026
Csp6I GTAC 3 cut(s) 406, 427, 814
CspCI CAANNNNNGTGG 2 cut(s) 688, 723
CviAII CATG 8 cut(s) 288, 434, 605, 611, 659, 968, 1202, 1305
CviQI GTAC 3 cut(s) 406, 427, 814
DdeI CTNAG 4 cut(s) 481, 817, 1158, 1223
DinI GGCGCC 1 cut(s) 791
DpnI GATC 8 cut(s) 179, 213, 243, 417, 536, 822, 873, 1025
DpnII GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
Eam1104I CTCTTC 1 cut(s) 558
EarI CTCTTC 1 cut(s) 558
EciI GGCGGA 1 cut(s) 85
Eco24I GRGCYC 2 cut(s) 1336, 1389
Eco31I GGTCTC 1 cut(s) 297
Eco47I GGWCC 2 cut(s) 137, 1108
Eco47III AGCGCT 1 cut(s) 1352
Eco88I CYCGRG 1 cut(s) 983
EcoO109I RGGNCCY 2 cut(s) 137, 1108
EcoRII CCWGG 2 cut(s) 372, 1091
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 2 cut(s) 1336, 1389
EgeI GGCGCC 1 cut(s) 791
EheI GGCGCC 1 cut(s) 791
FaeI CATG 8 cut(s) 291, 437, 608, 614, 662, 971, 1205, 1308
FatI CATG 8 cut(s) 287, 433, 604, 610, 658, 967, 1201, 1304
FblI GTMKAC 1 cut(s) 729
Fnu4HI GCNGC 7 cut(s) 130, 663, 666, 780, 783, 1065, 1254
FokI GGATG 8 cut(s) 22, 164, 462, 822, 908, 1085, 1184, 1289
FriOI GRGCYC 2 cut(s) 1336, 1389
Fsp4HI GCNGC 7 cut(s) 130, 663, 666, 780, 783, 1065, 1254
FspBI CTAG 5 cut(s) 6, 141, 314, 794, 1211
FspI TGCGCA 1 cut(s) 639
GlaI GCGC 3 cut(s) 639, 791, 1352
GluI GCNGC 7 cut(s) 130, 663, 666, 780, 783, 1065, 1254
GsuI CTGGAG 1 cut(s) 855
HaeII RGCGCY 2 cut(s) 793, 1354
HaeIII GGCC 1 cut(s) 656
HapII CCGG 2 cut(s) 597, 1393
HhaI GCGC 3 cut(s) 640, 792, 1353
Hin1I GRCGYC 1 cut(s) 790
Hin1II CATG 8 cut(s) 291, 437, 608, 614, 662, 971, 1205, 1308
Hin6I GCGC 3 cut(s) 638, 790, 1351
HinP1I GCGC 3 cut(s) 638, 790, 1351
HincII GTYRAC 1 cut(s) 723
HindII GTYRAC 1 cut(s) 723
HinfI GANTC 4 cut(s) 60, 297, 940, 1187
HpaII CCGG 2 cut(s) 597, 1393
HphI GGTGA 4 cut(s) 209, 1004, 1055, 1454
Hpy166II GTNNAC 6 cut(s) 710, 723, 730, 860, 1142, 1366
Hpy188I TCNGA 5 cut(s) 757, 892, 939, 1072, 1262
Hpy188III TCNNGA 9 cut(s) 294, 434, 583, 834, 913, 954, 1111, 1202, 1432
Hpy8I GTNNAC 6 cut(s) 710, 723, 730, 860, 1142, 1366
HpyAV CCTTC 5 cut(s) 104, 440, 1031, 1054, 1439
HpyCH4III ACNGT 5 cut(s) 405, 578, 651, 727, 734
HpyCH4V TGCA 9 cut(s) 120, 491, 506, 614, 782, 1253, 1268, 1304, 1412
HpyF10VI GCNNNNNNNGC 4 cut(s) 95, 126, 662, 1393
HpyF3I CTNAG 4 cut(s) 481, 817, 1158, 1223
Hsp92I GRCGYC 1 cut(s) 790
Hsp92II CATG 8 cut(s) 291, 437, 608, 614, 662, 971, 1205, 1308
HspAI GCGC 3 cut(s) 638, 790, 1351
KasI GGCGCC 1 cut(s) 789
Kzo9I GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
LmnI GCTCC 3 cut(s) 113, 598, 1280
Lsp1109I GCAGC 6 cut(s) 649, 652, 766, 794, 1076, 1265
LweI GCATC 5 cut(s) 142, 256, 623, 1076, 1107
MaeI CTAG 5 cut(s) 6, 141, 314, 794, 1211
MaeIII GTNAC 3 cut(s) 197, 397, 572
MalI GATC 8 cut(s) 179, 213, 243, 417, 536, 822, 873, 1025
MboI GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
MboII GAAGA 7 cut(s) 245, 292, 344, 545, 612, 779, 1398
MflI RGATCY 2 cut(s) 415, 820
MhlI GDGCHC 2 cut(s) 1336, 1389
MluCI AATT 5 cut(s) 540, 751, 762, 774, 1114
Mly113I GGCGCC 1 cut(s) 790
MlyI GAGTC 1 cut(s) 1181
MmeI TCCRAC 1 cut(s) 1240
Mph1103I ATGCAT 1 cut(s) 616
MseI TTAA 5 cut(s) 20, 363, 455, 543, 1239
MslI CAYNNNNRTG 3 cut(s) 206, 609, 1072
MspA1I CMGCKG 1 cut(s) 1256
MspI CCGG 2 cut(s) 597, 1393
MspR9I CCNGG 4 cut(s) 374, 597, 1093, 1393
Mva1269I GAATGC 1 cut(s) 384
MvaI CCWGG 2 cut(s) 374, 1093
MwoI GCNNNNNNNGC 4 cut(s) 95, 126, 662, 1393
NarI GGCGCC 1 cut(s) 790
NciI CCSGG 2 cut(s) 597, 1393
NdeII GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
NlaIII CATG 8 cut(s) 291, 437, 608, 614, 662, 971, 1205, 1308
NlaIV GGNNCC 5 cut(s) 115, 138, 319, 791, 1397
NmuCI GTSAC 1 cut(s) 197
NsbI TGCGCA 1 cut(s) 639
NsiI ATGCAT 1 cut(s) 616
NspI RCATGY 1 cut(s) 614
PagI TCATGA 2 cut(s) 433, 1201
PaqCI CACCTGC 1 cut(s) 506
PasI CCCWGGG 1 cut(s) 1092
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PctI GAATGC 1 cut(s) 384
PfeI GAWTC 3 cut(s) 60, 297, 940
PflMI CCANNNNNTGG 1 cut(s) 288
PfoI TCCNGGA 2 cut(s) 372, 595
PkrI GCNGC 7 cut(s) 131, 664, 667, 781, 784, 1066, 1255
PleI GAGTC 1 cut(s) 1181
PluTI GGCGCC 1 cut(s) 793
PpsI GAGTC 1 cut(s) 1181
PpuMI RGGWCCY 2 cut(s) 137, 1108
PshBI ATTAAT 2 cut(s) 363, 543
PsiI TTATAA 1 cut(s) 1002
Psp5II RGGWCCY 2 cut(s) 137, 1108
Psp6I CCWGG 2 cut(s) 372, 1091
PspGI CCWGG 2 cut(s) 372, 1091
PspN4I GGNNCC 5 cut(s) 115, 138, 319, 791, 1397
PspPI GGNCC 3 cut(s) 137, 655, 1108
PspPPI RGGWCCY 2 cut(s) 137, 1108
PstI CTGCAG 1 cut(s) 784
PsuI RGATCY 2 cut(s) 415, 820
RsaI GTAC 3 cut(s) 407, 428, 815
RsaNI GTAC 3 cut(s) 406, 427, 814
RseI CAYNNNNRTG 3 cut(s) 206, 609, 1072
SaqAI TTAA 5 cut(s) 20, 363, 455, 543, 1239
SatI GCNGC 7 cut(s) 130, 663, 666, 780, 783, 1065, 1254
Sau3AI GATC 8 cut(s) 177, 211, 241, 415, 534, 820, 871, 1023
Sau96I GGNCC 3 cut(s) 137, 655, 1108
SchI GAGTC 1 cut(s) 1181
ScrFI CCNGG 4 cut(s) 374, 597, 1093, 1393
SduI GDGCHC 2 cut(s) 1336, 1389
SetI ASST 9 cut(s) 108, 432, 500, 709, 807, 1045, 1110, 1251, 1441
SfaNI GCATC 5 cut(s) 142, 256, 623, 1076, 1107
SfcI CTRYAG 2 cut(s) 618, 780
SfoI GGCGCC 1 cut(s) 791
SinI GGWCC 2 cut(s) 137, 1108
SmiMI CAYNNNNRTG 3 cut(s) 206, 609, 1072
SmlI CTYRAG 2 cut(s) 911, 1335
SmoI CTYRAG 2 cut(s) 911, 1335
Sse9I AATT 5 cut(s) 540, 751, 762, 774, 1114
SsiI CCGC 4 cut(s) 96, 129, 1256, 1426
SspDI GGCGCC 1 cut(s) 789
SspMI CTAG 5 cut(s) 6, 141, 314, 794, 1211
StyD4I CCNGG 4 cut(s) 372, 595, 1091, 1391
TaaI ACNGT 5 cut(s) 405, 578, 651, 727, 734
TaqI TCGA 3 cut(s) 295, 682, 1026
TasI AATT 5 cut(s) 540, 751, 762, 774, 1114
TauI GCSGC 1 cut(s) 132
TfiI GAWTC 3 cut(s) 60, 297, 940
Tru1I TTAA 5 cut(s) 20, 363, 455, 543, 1239
Tru9I TTAA 5 cut(s) 20, 363, 455, 543, 1239
TscAI CASTG 3 cut(s) 61, 408, 536
TseFI GTSAC 1 cut(s) 197
TseI GCWGC 6 cut(s) 662, 665, 779, 782, 1064, 1253
Tsp45I GTSAC 1 cut(s) 197
TspDTI ATGAA 8 cut(s) 45, 57, 345, 422, 450, 621, 1190, 1218
TspGWI ACGGA 1 cut(s) 553
TspRI CASTG 3 cut(s) 61, 408, 536
Van91I CCANNNNNTGG 1 cut(s) 288
VpaK11BI GGWCC 2 cut(s) 137, 1108
VspI ATTAAT 2 cut(s) 363, 543
XceI RCATGY 1 cut(s) 614
XmiI GTMKAC 1 cut(s) 729
XspI CTAG 5 cut(s) 6, 141, 314, 794, 1211
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.