Rmu_sc0005230.1_g000009
NAC Family

Inactive TPR repeat-containing thioredoxin TTL3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005230.1
OG0012780
Physical Location & Seq
Forward (+)
55298 .. 58725
3428 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2226 bp
atgccccagacaggcaaatccacccaagaaccgggtttcgactcgctcccgactcgcttccgtgactcagtcacttgcaatgacgaccataataagaacaagcccgatttcaaagagctcgatctgggcggctcacccgtctcgcccttgatgaccaggacctcagtgaacggcgttaacaacaatggaggtggcgccgccactacttccagctccagttcgagctcttccggttcggtttccagcaaaacccagctggggagaagatccgacggcagtagacccaacaaccactccggcgagctaactgtctcctccgaaatgagccccagagcttccgagagcgtccgatccggtaccacgccgcgtaattggaagccggagcatcggagatcggtctccgccggaccgccgttgatctactccggcaaaacgttcaccggcggtagtaacgttagtgccgggggtagcgttggtaatgcttgtggaaatgtagcaaccaataattcatcttcaacctccacaactgtgttccccagcggcaacatatgcccttccgggaaaattacgaagtctggaattgtgtggagagccagcagtaagactgatgttttgggttcggggtgcggcaactacggccacggtagcatagttcgaggggtttcgaaatcggatgctactggttcgaatgtgggtggcaacttacagattggtggggagtctgtggcggttaagagggcaatggggaactctgatccagaggaggtgaagaaggctgggaatgagatgtataagaaaggccattttgcggaggcattgacaatgtatgatcgcgctgtgtctttgtctccggacaatgctgcttaccggagtaacagggcggcggcattgaccgcgctggggcggctggccgaggctgtgagggagtgtgaggaggctgtcaggttggaccctggttatgggagggcgcatcaacggcttggctcgctttatcttcgtttcaagtctgataatttcaaaggttattccttgatggattcaagaccagtaacattcatggcggaaaatgcctcccaccacctctcatttcctggacaaaggccagaacagtctgagttgcagaagttgaagtcactggagaagcatctgaaacaatgttcagatgcccgtaagcttggtgattggaagaatgtgctaagggaatcggatgcagccatagaaatgggactggagtcctcccctcagcttgtggcgtccaaggcagaagctctattgaagctccataaactcgaagatgcagaatccatcctatcaaacatacctaagtttgaaaattacccttcttcctgcttgcaaaccaagttatttggcatgctcgttgaagcttatgtactctatgtaagggcccaggttgaaatggcattcggaaggtttgagaatgcagtagcagctgtagagaaggctggtgtaattgattacagcaatgttgaagttacaagggtatcaaatattgtgaaaatggttgcgaaagctcgttctcaaggtaatgatctttttagctctggaaggtttgctgaagcctgcgctgcttatggggagggcctcaagtatgatagttccaattctgttctatactgcaatagagcagtttgctggtctaagcttggacaatgggaacagtctgttgaagactgcaaccaagccctcaagattcagcctcattacaccaaagcccttctaagaagggctgtgtcgaatgcaaagttagaacgatgggcagaggcagtgagagattatgaggtcttgaggagggaactccccggagacaatgaggttgtagaatctcttcaccaggctcgagtggcattgaagaagttccgtggagaggaacttcatcatgtaaagtctggcggtgaagtggaagaagtttctaatttaaataagttcaaagctgcaatatcatcacctggtgtttctgtcattcatttcaaagttgaatccaatgagcaatgtgaagaactatccccattcataaatatgctttgcgttagatatccatctgttaaattttttaaggtggatgtggaggagagcttagccatagcaaaagctgagagcataagatctgttccaacatttaaaatttacaagaatggtgaaaaggtcaaggagatggtccgcccaagccaccagttcttagaggactctgtgagaaccagtttctag

Protein Analysis

741

Amino Acids

80.51

Weight (kDa)

8.91

Isoelectric Point (pI)

47.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_16 PF13432 259 - 320 6.5e-09 Tetratricopeptide repeat
TPR_11 PF13414 260 - 301 3.9e-07 TPR repeat
TPR_19 PF14559 265 - 324 4.2e-06 Tetratricopeptide repeat
TPR_1 PF00515 544 - 575 1.7e-07 Tetratricopeptide repeat
Thioredoxin PF00085 646 - 729 3.3e-11 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012780)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G42580 AT3G58620 AT3G58620
malus_domestica MD09G1238500.v1.1
prunus_persica Prupe.3G121600_v2.0.a1 Prupe.3G121600_v2.0.a1
pyrus_communis pycom09g15720
rosa_chinensis RchiOBHm_Chr2g0129261
rosa_laevigata RLG00000019069
rosa_multiflora Rmu_sc0005230.1_g000009
rosa_roxburghii Rroxscaffold_1G00034740 Rroxscaffold_2G00114720
rosa_rugosa Rorug02G0285900
rosa_samantha Rh2AG337700 Rh2BG345500 Rh2CG325100 Rh2DG363000
rosa_wichuraiana Rw2G027390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 356
AccB1I GGYRCC 2 cut(s) 194, 356
AccI GTMKAC 1 cut(s) 280
AccII CGCG 3 cut(s) 367, 834, 896
AccIII TCCGGA 1 cut(s) 850
AclI AACGTT 2 cut(s) 434, 453
AclWI GGATC 3 cut(s) 261, 345, 749
AcoI YGGCCR 2 cut(s) 637, 909
AcsI RAATTY 2 cut(s) 2066, 2142
AcuI CTGAAG 1 cut(s) 1596
AcyI GRCGYC 2 cut(s) 195, 1253
AdeI CACNNNGTG 1 cut(s) 1970
AfaI GTAC 2 cut(s) 358, 1392
AfiI CCNNNNNNNGG 7 cut(s) 11, 31, 258, 808, 900, 959, 1885
AjnI CCWGG 6 cut(s) 155, 952, 1090, 1407, 1851, 1966
AleI CACNNNNGTG 1 cut(s) 527
Alw21I GWGCWC 2 cut(s) 120, 227
Alw26I GTCTC 5 cut(s) 145, 316, 403, 852, 1818
AlwI GGATC 3 cut(s) 261, 345, 749
Ama87I CYCGRG 1 cut(s) 1857
Aor13HI TCCGGA 1 cut(s) 850
AoxI GGCC 6 cut(s) 637, 799, 909, 1100, 1404, 1600
ApaI GGGCCC 1 cut(s) 1408
ApeKI GCWGC 5 cut(s) 860, 1211, 1448, 1586, 1952
ApoI RAATTY 2 cut(s) 2066, 2142
ArsI GACNNNNNNTTYG 2 cut(s) 595, 627
Asp700I GAANNNNTTC 2 cut(s) 1845, 1874
Asp718I GGTACC 1 cut(s) 356
AspLEI GCGC 5 cut(s) 197, 836, 898, 970, 1586
AspS9I GGNCC 7 cut(s) 159, 407, 949, 1404, 1405, 1600, 2176
AsuC2I CCSGG 4 cut(s) 33, 463, 559, 1821
AsuHPI GGTGA 8 cut(s) 126, 430, 778, 1190, 1841, 1925, 1956, 2168
AsuII TTCGAA 2 cut(s) 665, 686
AvaI CYCGRG 1 cut(s) 1857
AvaII GGWCC 4 cut(s) 159, 407, 949, 2176
BaeGI GKGCMC 1 cut(s) 1408
BaeI ACNNNNGTAYC 2 cut(s) 1485, 1518
BanI GGYRCC 2 cut(s) 194, 356
BanII GRGCYC 4 cut(s) 120, 227, 329, 1408
BarI GAAGNNNNNNTAC 4 cut(s) 1374, 1406, 1830, 1862
BbsI GAAGAC 1 cut(s) 1695
Bbv12I GWGCWC 2 cut(s) 120, 227
BbvCI CCTCAGC 1 cut(s) 1242
BbvI GCAGC 5 cut(s) 847, 1223, 1460, 1573, 1939
BccI CCATC 5 cut(s) 1027, 1313, 1767, 2065, 2167
BceAI ACGGC 5 cut(s) 187, 289, 397, 652, 992
BciT130I CCWGG 6 cut(s) 157, 954, 1092, 1409, 1853, 1968
BcnI CCSGG 4 cut(s) 33, 463, 559, 1821
BcoDI GTCTC 5 cut(s) 145, 316, 403, 852, 1818
BfaI CTAG 1 cut(s) 2224
BfmI CTRYAG 1 cut(s) 1452
BfoI RGCGCY 1 cut(s) 198
BglII AGATCT 1 cut(s) 2123
BlpI GCTNAGC 1 cut(s) 2095
Bme18I GGWCC 4 cut(s) 159, 407, 949, 2176
BmeT110I CYCGRG 1 cut(s) 1857
BmgT120I GGNCC 7 cut(s) 159, 407, 949, 1404, 1405, 1600, 2176
BmiI GGNNCC 4 cut(s) 196, 358, 951, 1406
BmsI GCATC 7 cut(s) 394, 664, 979, 1153, 1153, 1198, 1285
BoxI GACNNNNGTC 1 cut(s) 1231
BpiI GAAGAC 1 cut(s) 1695
BpmI CTGGAG 3 cut(s) 199, 1157, 1250
Bpu10I CCTNAGC 2 cut(s) 1196, 1242
Bpu1102I GCTNAGC 1 cut(s) 2095
Bpu14I TTCGAA 2 cut(s) 665, 686
BpuEI CTTGAG 4 cut(s) 1524, 1589, 1691, 1825
BpuMI CCSGG 4 cut(s) 33, 463, 559, 1821
BsaBI GATNNNNATC 1 cut(s) 2056
BsaHI GRCGYC 2 cut(s) 195, 1253
BsaI GGTCTC 1 cut(s) 403
BsaJI CCNNGG 8 cut(s) 462, 640, 912, 952, 1257, 1407, 1819, 1879
BsaWI WCCGGW 4 cut(s) 230, 353, 850, 867
BsaXI ACNNNNNCTCC 2 cut(s) 278, 308
Bsc4I CCNNNNNNNGG 7 cut(s) 11, 31, 258, 808, 900, 959, 1885
Bse118I RCCGGY 1 cut(s) 440
Bse1I ACTGG 7 cut(s) 216, 685, 1046, 1140, 1233, 2191, 2217
Bse3DI GCAATG 4 cut(s) 85, 747, 1489, 2015
Bse8I GATNNNNATC 1 cut(s) 2056
BseAI TCCGGA 1 cut(s) 850
BseBI CCWGG 6 cut(s) 157, 954, 1092, 1409, 1853, 1968
BseDI CCNNGG 8 cut(s) 462, 640, 912, 952, 1257, 1407, 1819, 1879
BseGI GGATG 4 cut(s) 679, 1213, 1305, 2086
BseJI GATNNNNATC 1 cut(s) 2056
BseLI CCNNNNNNNGG 7 cut(s) 11, 31, 258, 808, 900, 959, 1885
BseMI GCAATG 4 cut(s) 85, 747, 1489, 2015
BseMII CTCAG 5 cut(s) 81, 177, 1104, 1256, 2103
BseNI ACTGG 7 cut(s) 216, 685, 1046, 1140, 1233, 2191, 2217
BseRI GAGGAG 5 cut(s) 304, 776, 947, 1822, 2102
BseSI GKGCMC 1 cut(s) 1408
BseXI GCAGC 5 cut(s) 847, 1223, 1460, 1573, 1939
BseYI CCCAGC 5 cut(s) 252, 256, 536, 776, 898
Bsh1236I CGCG 3 cut(s) 367, 834, 896
BshFI GGCC 6 cut(s) 639, 801, 911, 1102, 1406, 1602
BshNI GGYRCC 2 cut(s) 194, 356
BsiHKAI GWGCWC 2 cut(s) 120, 227
BsiHKCI CYCGRG 1 cut(s) 1857
BslFI GGGAC 1 cut(s) 1239
BslI CCNNNNNNNGG 7 cut(s) 11, 31, 258, 808, 900, 959, 1885
BsmAI GTCTC 5 cut(s) 145, 316, 403, 852, 1818
BsmBI CGTCTC 1 cut(s) 145
BsmFI GGGAC 1 cut(s) 1239
BsmI GAATGC 3 cut(s) 1421, 1444, 1762
BsnI GGCC 6 cut(s) 639, 801, 911, 1102, 1406, 1602
Bso31I GGTCTC 1 cut(s) 403
BsoBI CYCGRG 1 cut(s) 1857
Bsp119I TTCGAA 2 cut(s) 665, 686
Bsp120I GGGCCC 1 cut(s) 1404
Bsp1286I GDGCHC 4 cut(s) 120, 227, 329, 1408
Bsp13I TCCGGA 1 cut(s) 850
Bsp143I GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
Bsp1720I GCTNAGC 1 cut(s) 2095
BspANI GGCC 6 cut(s) 639, 801, 911, 1102, 1406, 1602
BspCNI CTCAG 5 cut(s) 80, 176, 1105, 1255, 2104
BspEI TCCGGA 1 cut(s) 850
BspFNI CGCG 3 cut(s) 367, 834, 896
BspLI GGNNCC 4 cut(s) 196, 358, 951, 1406
BspPI GGATC 3 cut(s) 261, 345, 749
BspQI GCTCTTC 1 cut(s) 232
BspT104I TTCGAA 2 cut(s) 665, 686
BspT107I GGYRCC 2 cut(s) 194, 356
BspTNI GGTCTC 1 cut(s) 403
BsrDI GCAATG 4 cut(s) 85, 747, 1489, 2015
BsrFI RCCGGY 1 cut(s) 440
BsrI ACTGG 7 cut(s) 216, 685, 1046, 1140, 1233, 2191, 2217
BssAI RCCGGY 1 cut(s) 440
BssECI CCNNGG 8 cut(s) 462, 640, 912, 952, 1257, 1407, 1819, 1879
BssMI GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
BssNI GRCGYC 2 cut(s) 195, 1253
BssT1I CCWWGG 1 cut(s) 1257
Bst2UI CCWGG 6 cut(s) 157, 954, 1092, 1409, 1853, 1968
Bst4CI ACNGT 5 cut(s) 310, 529, 644, 1110, 1680
Bst6I CTCTTC 2 cut(s) 232, 1851
BstACI GRCGYC 2 cut(s) 195, 1253
BstAPI GCANNNNNTGC 1 cut(s) 549
BstBI TTCGAA 2 cut(s) 665, 686
BstC8I GCNNGC 7 cut(s) 302, 595, 909, 986, 1352, 1373, 1582
BstDSI CCRYGG 2 cut(s) 640, 1879
BstF5I GGATG 4 cut(s) 679, 1213, 1305, 2086
BstFNI CGCG 3 cut(s) 367, 834, 896
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 5 cut(s) 197, 836, 898, 970, 1586
BstKTI GATC 9 cut(s) 124, 269, 353, 395, 420, 757, 832, 1552, 2126
BstMAI GTCTC 5 cut(s) 145, 316, 403, 852, 1818
BstMBI GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
BstNI CCWGG 6 cut(s) 157, 954, 1092, 1409, 1853, 1968
BstNSI RCATGY 1 cut(s) 1375
BstPAI GACNNNNGTC 1 cut(s) 1231
BstSFI CTRYAG 1 cut(s) 1452
BstSLI GKGCMC 1 cut(s) 1408
BstUI CGCG 3 cut(s) 367, 834, 896
BstV1I GCAGC 5 cut(s) 847, 1223, 1460, 1573, 1939
BstV2I GAAGAC 1 cut(s) 1695
BstX2I RGATCY 2 cut(s) 266, 2123
BstXI CCANNNNNNTGG 1 cut(s) 1222
BstYI RGATCY 2 cut(s) 266, 2123
BsuRI GGCC 6 cut(s) 639, 801, 911, 1102, 1406, 1602
BtgI CCRYGG 2 cut(s) 640, 1879
BtsCI GGATG 4 cut(s) 679, 1213, 1305, 2086
BtsI GCAGTG 1 cut(s) 1791
BtsIMutI CAGTG 3 cut(s) 171, 1133, 1791
Cac8I GCNNGC 7 cut(s) 302, 595, 909, 986, 1352, 1373, 1582
CfoI GCGC 5 cut(s) 197, 836, 898, 970, 1586
Cfr10I RCCGGY 1 cut(s) 440
Cfr13I GGNCC 7 cut(s) 159, 407, 949, 1404, 1405, 1600, 2176
CpoI CGGWCCG 1 cut(s) 407
CseI GACGC 2 cut(s) 334, 1242
CsiI ACCWGGT 1 cut(s) 1966
Csp6I GTAC 2 cut(s) 357, 1391
CspCI CAANNNNNGTGG 2 cut(s) 172, 207
CspI CGGWCCG 1 cut(s) 407
CviAII CATG 3 cut(s) 1057, 1372, 1898
CviQI GTAC 2 cut(s) 357, 1391
DinI GGCGCC 1 cut(s) 196
DpnI GATC 9 cut(s) 123, 268, 352, 394, 419, 756, 831, 1551, 2125
DpnII GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
DraI TTTAAA 2 cut(s) 1938, 2140
DraIII CACNNNGTG 1 cut(s) 1970
EaeI YGGCCR 2 cut(s) 637, 909
Eam1104I CTCTTC 2 cut(s) 232, 1851
EarI CTCTTC 2 cut(s) 232, 1851
EciI GGCGGA 3 cut(s) 391, 1076, 2168
Ecl136II GAGCTC 2 cut(s) 118, 225
Eco130I CCWWGG 1 cut(s) 1257
Eco24I GRGCYC 4 cut(s) 120, 227, 329, 1408
Eco31I GGTCTC 1 cut(s) 403
Eco32I GATATC 1 cut(s) 2054
Eco47I GGWCC 4 cut(s) 159, 407, 949, 2176
Eco53kI GAGCTC 2 cut(s) 118, 225
Eco57I CTGAAG 1 cut(s) 1596
Eco88I CYCGRG 1 cut(s) 1857
EcoICRI GAGCTC 2 cut(s) 118, 225
EcoO109I RGGNCCY 3 cut(s) 159, 1404, 1600
EcoRII CCWGG 6 cut(s) 155, 952, 1090, 1407, 1851, 1966
EcoRV GATATC 1 cut(s) 2054
EcoT14I CCWWGG 1 cut(s) 1257
EcoT38I GRGCYC 4 cut(s) 120, 227, 329, 1408
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 1 cut(s) 1257
Esp3I CGTCTC 1 cut(s) 145
FaeI CATG 3 cut(s) 1060, 1375, 1901
FaqI GGGAC 1 cut(s) 1239
FatI CATG 3 cut(s) 1056, 1371, 1897
FauNDI CATATG 1 cut(s) 548
FblI GTMKAC 1 cut(s) 280
FokI GGATG 4 cut(s) 686, 1220, 1292, 2093
FriOI GRGCYC 4 cut(s) 120, 227, 329, 1408
FspBI CTAG 1 cut(s) 2224
GlaI GCGC 5 cut(s) 196, 835, 897, 969, 1585
GsaI CCCAGC 5 cut(s) 256, 260, 540, 780, 902
GsuI CTGGAG 3 cut(s) 199, 1157, 1250
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 6 cut(s) 639, 801, 911, 1102, 1406, 1602
HgaI GACGC 2 cut(s) 334, 1242
HhaI GCGC 5 cut(s) 197, 836, 898, 970, 1586
Hin1I GRCGYC 2 cut(s) 195, 1253
Hin1II CATG 3 cut(s) 1060, 1375, 1901
Hin6I GCGC 5 cut(s) 195, 834, 896, 968, 1584
HinP1I GCGC 5 cut(s) 195, 834, 896, 968, 1584
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HindIII AAGCTT 3 cut(s) 1172, 1383, 1661
HpaI GTTAAC 1 cut(s) 178
HphI GGTGA 8 cut(s) 126, 430, 778, 1190, 1841, 1925, 1956, 2168
Hpy166II GTNNAC 4 cut(s) 169, 178, 281, 438
Hpy188III TCNNGA 8 cut(s) 49, 576, 758, 851, 1041, 1563, 1708, 1804
Hpy8I GTNNAC 4 cut(s) 169, 178, 281, 438
Hpy99I CGWCG 1 cut(s) 275
HpyAV CCTTC 8 cut(s) 564, 766, 1350, 1422, 1453, 1560, 1737, 1745
HpyCH4III ACNGT 5 cut(s) 310, 529, 644, 1110, 1680
HpyCH4IV ACGT 2 cut(s) 434, 453
HpySE526I ACGT 2 cut(s) 434, 453
Hsp92I GRCGYC 2 cut(s) 195, 1253
Hsp92II CATG 3 cut(s) 1060, 1375, 1901
HspAI GCGC 5 cut(s) 195, 834, 896, 968, 1584
KasI GGCGCC 1 cut(s) 194
Kpn2I TCCGGA 1 cut(s) 850
KpnI GGTACC 1 cut(s) 360
KspAI GTTAAC 1 cut(s) 178
Kzo9I GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
LguI GCTCTTC 1 cut(s) 232
LmnI GCTCC 4 cut(s) 51, 218, 382, 1284
Lsp1109I GCAGC 5 cut(s) 847, 1223, 1460, 1573, 1939
LweI GCATC 7 cut(s) 394, 664, 979, 1153, 1153, 1198, 1285
MabI ACCWGGT 1 cut(s) 1966
MaeI CTAG 1 cut(s) 2224
MaeII ACGT 2 cut(s) 434, 453
MaeIII GTNAC 7 cut(s) 62, 70, 449, 872, 1048, 1131, 1492
MalI GATC 9 cut(s) 123, 268, 352, 394, 419, 756, 831, 1551, 2125
MboI GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
MflI RGATCY 2 cut(s) 266, 2123
MhlI GDGCHC 4 cut(s) 120, 227, 329, 1408
Mly113I GGCGCC 1 cut(s) 195
MlyI GAGTC 6 cut(s) 35, 46, 59, 728, 1241, 2198
MmeI TCCRAC 3 cut(s) 294, 927, 2156
MroI TCCGGA 1 cut(s) 850
MroXI GAANNNNTTC 2 cut(s) 1845, 1874
MseI TTAA 6 cut(s) 177, 732, 1937, 2064, 2073, 2139
MslI CAYNNNNRTG 3 cut(s) 527, 1220, 2036
MspA1I CMGCKG 3 cut(s) 256, 540, 1451
Mva1269I GAATGC 3 cut(s) 1421, 1444, 1762
MvaI CCWGG 6 cut(s) 157, 954, 1092, 1409, 1853, 1968
MvnI CGCG 3 cut(s) 367, 834, 896
NarI GGCGCC 1 cut(s) 195
NciI CCSGG 4 cut(s) 33, 463, 559, 1821
NdeI CATATG 1 cut(s) 548
NdeII GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
NlaIII CATG 3 cut(s) 1060, 1375, 1901
NlaIV GGNNCC 4 cut(s) 196, 358, 951, 1406
NmeAIII GCCGAG 1 cut(s) 937
NmuCI GTSAC 3 cut(s) 62, 70, 1131
NspI RCATGY 1 cut(s) 1375
NspV TTCGAA 2 cut(s) 665, 686
OliI CACNNNNGTG 1 cut(s) 527
PaeI GCATGC 1 cut(s) 1375
PaeR7I CTCGAG 1 cut(s) 1857
PciSI GCTCTTC 1 cut(s) 232
PctI GAATGC 3 cut(s) 1421, 1444, 1762
PdmI GAANNNNTTC 2 cut(s) 1845, 1874
PfeI GAWTC 6 cut(s) 1037, 1202, 1301, 1711, 1841, 1997
PflFI GACNNNGTC 1 cut(s) 68
PfoI TCCNGGA 2 cut(s) 557, 1090
PleI GAGTC 6 cut(s) 35, 46, 59, 727, 1240, 2198
PluTI GGCGCC 1 cut(s) 198
PpsI GAGTC 6 cut(s) 35, 46, 59, 727, 1240, 2198
PpuMI RGGWCCY 1 cut(s) 159
PshAI GACNNNNGTC 1 cut(s) 1231
Psp124BI GAGCTC 2 cut(s) 120, 227
Psp1406I AACGTT 2 cut(s) 434, 453
Psp5II RGGWCCY 1 cut(s) 159
Psp6I CCWGG 6 cut(s) 155, 952, 1090, 1407, 1851, 1966
PspFI CCCAGC 5 cut(s) 252, 256, 536, 776, 898
PspGI CCWGG 6 cut(s) 155, 952, 1090, 1407, 1851, 1966
PspN4I GGNNCC 4 cut(s) 196, 358, 951, 1406
PspOMI GGGCCC 1 cut(s) 1404
PspPI GGNCC 7 cut(s) 159, 407, 949, 1404, 1405, 1600, 2176
PspPPI RGGWCCY 1 cut(s) 159
PspXI VCTCGAGB 1 cut(s) 1857
PsuI RGATCY 2 cut(s) 266, 2123
PsyI GACNNNGTC 1 cut(s) 68
PvuII CAGCTG 2 cut(s) 256, 1451
RsaI GTAC 2 cut(s) 358, 1392
RsaNI GTAC 2 cut(s) 357, 1391
RseI CAYNNNNRTG 3 cut(s) 527, 1220, 2036
Rsr2I CGGWCCG 1 cut(s) 407
RsrII CGGWCCG 1 cut(s) 407
SacI GAGCTC 2 cut(s) 120, 227
SapI GCTCTTC 1 cut(s) 232
SaqAI TTAA 6 cut(s) 177, 732, 1937, 2064, 2073, 2139
Sau3AI GATC 9 cut(s) 121, 266, 350, 392, 417, 754, 829, 1549, 2123
Sau96I GGNCC 7 cut(s) 159, 407, 949, 1404, 1405, 1600, 2176
SchI GAGTC 6 cut(s) 35, 46, 59, 728, 1241, 2198
SduI GDGCHC 4 cut(s) 120, 227, 329, 1408
SexAI ACCWGGT 1 cut(s) 1966
SfaNI GCATC 7 cut(s) 394, 664, 979, 1153, 1153, 1198, 1285
SfcI CTRYAG 1 cut(s) 1452
SfoI GGCGCC 1 cut(s) 196
Sfr274I CTCGAG 1 cut(s) 1857
SfuI TTCGAA 2 cut(s) 665, 686
SgrAI CRCCGGYG 1 cut(s) 440
SinI GGWCC 4 cut(s) 159, 407, 949, 2176
SlaI CTCGAG 1 cut(s) 1857
SmiI ATTTAAAT 1 cut(s) 1938
SmiMI CAYNNNNRTG 3 cut(s) 527, 1220, 2036
SmlI CTYRAG 5 cut(s) 1539, 1604, 1706, 1804, 1857
SmoI CTYRAG 5 cut(s) 1539, 1604, 1706, 1804, 1857
SphI GCATGC 1 cut(s) 1375
SspDI GGCGCC 1 cut(s) 194
SspI AATATT 1 cut(s) 1510
SspMI CTAG 1 cut(s) 2224
SstI GAGCTC 2 cut(s) 120, 227
StyI CCWWGG 1 cut(s) 1257
SwaI ATTTAAAT 1 cut(s) 1938
TaaI ACNGT 5 cut(s) 310, 529, 644, 1110, 1680
TaiI ACGT 2 cut(s) 437, 456
TaqI TCGA 9 cut(s) 39, 120, 221, 655, 665, 686, 1290, 1754, 1858
TaqII GACCGA 1 cut(s) 385
TatI WGTACW 1 cut(s) 1390
TauI GCSGC 8 cut(s) 132, 200, 367, 543, 630, 884, 887, 907
TfiI GAWTC 6 cut(s) 1037, 1202, 1301, 1711, 1841, 1997
Tru1I TTAA 6 cut(s) 177, 732, 1937, 2064, 2073, 2139
Tru9I TTAA 6 cut(s) 177, 732, 1937, 2064, 2073, 2139
TscAI CASTG 3 cut(s) 171, 1140, 1791
TseFI GTSAC 3 cut(s) 62, 70, 1131
TseI GCWGC 5 cut(s) 860, 1211, 1448, 1586, 1952
Tsp45I GTSAC 3 cut(s) 62, 70, 1131
TspDTI ATGAA 5 cut(s) 498, 1045, 1883, 1973, 2020
TspGWI ACGGA 2 cut(s) 50, 1868
TspRI CASTG 3 cut(s) 171, 1140, 1791
Tth111I GACNNNGTC 1 cut(s) 68
VpaK11BI GGWCC 4 cut(s) 159, 407, 949, 2176
XapI RAATTY 2 cut(s) 2066, 2142
XceI RCATGY 1 cut(s) 1375
XhoI CTCGAG 1 cut(s) 1857
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 2 cut(s) 1845, 1874
XspI CTAG 1 cut(s) 2224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.