Rmu_sc0005381.1_g000012

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005381.1
OG0005353
Physical Location & Seq
Forward (+)
74377 .. 78107
3731 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1689 bp
atggatcccttcgatttggtgcgaaaagggtttggcgctgctgcaagcaaggcaactactttaaatccaaatgcagcagagtttgttcccttttccctcagatctccttcatctggaagcaccagcacacctcaggcattttcttcatctggaacctttggaaaagcagtattagatcgaacagagtcatccacctcgaataattctgatgacgaggcccaccaattttggcgccaccagctccctgatgatatcacccctgactttaaggtcatgggagaagatgagtcaccaggtcttggaaacatctctttggcgggattgtccttgcatgatgacagtgaagcaacacagtttcctgcttctacaggcagtggatacttatataatgacattaatggtaatagcttttctgaaaagttaagagttgctacatccccctatggggatgatctttcctcgcccagtttcatgcatatgtcaaccaagccttgggataagcagattctgaatagcaatcagcttgttagcaatggtcatgaggggtctctttatgatggcatttctacacatggattcatgaatgacatattgggtgagcaaccagttgttgatgatagcgaaattaaccctgccgaatttttgggttcacagttccctgggttttcctctcagagccttgcagaagtttactttgccagtggttgtgacttaaacctgactattgagatgttgactcagttggagcttcaagctgatggtggttttaatgaaaatatgaatccaaagaccttgtcagctcctgatcttagttcaatggactttcctgcactaactccaacagatggtcagcatggtcatccaaaatatgttggagacgatgatttccagcaaagtggcaatccatatcgaacttctgacaaggacagaatgctgatgtttaagtctagctcatccattccgtctagaggttcaatagattttgcttcagctgtcaggaaattggcgactcaggattctggtggatggaagtatgagaggaatgggtctgctgatgccgctattggctcaagtagagcttcccatcttgtaaatagcacttacaatactgggcatggaagagccatctacagtgataggtcgcagactcgcggttcagctcggactgctcctgtttggcttgaaactggagatgctgttgcaaatatgtataccgatctgcgggaggaagctcgtgatcatgcacgcctacggaatgcatactttgagcaggcacgacaagcataccttgttggaaacaaggctctagcgaaggaactgagtgttaaagggcagctgcataacatgcatatgaaggcagctcatggaaaagctcaagaatctatatatcgccagaggaacccagaaatgcaaggcaatggaagacaggagaggatgatagacctgcatggacttcacgtaagtgaagctcttcataggctcaagcatgagctgagcatattgaggaacactgctagagcagcagagacgggtcttcaggtttatatatgtgttggaacaggccaccacacccggggttcacgcactccggcaaggcttccagttgctgtacagcgttacctactggaagaagaggggctcaacttcaatgagccacagccagggctgcttcgagttctgatgtactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

562

Amino Acids

61.49

Weight (kDa)

5.61

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1771 PF08590 404 - 467 9.3e-19 Domain of unknown function (DUF1771)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 269
Acc36I ACCTGC 1 cut(s) 1452
AccB1I GGYRCC 1 cut(s) 231
AccB7I CCANNNNNTGG 3 cut(s) 299, 492, 845
AccI GTMKAC 1 cut(s) 1211
AccII CGCG 1 cut(s) 1152
AciI CCGC 4 cut(s) 317, 1059, 1152, 1222
AclWI GGATC 1 cut(s) 12
AcsI RAATTY 1 cut(s) 638
AcuI CTGAAG 2 cut(s) 972, 1520
AcyI GRCGYC 1 cut(s) 232
AfaI GTAC 2 cut(s) 1611, 1685
AgsI TTSAA 5 cut(s) 752, 816, 975, 1184, 1648
AjnI CCWGG 3 cut(s) 292, 658, 1660
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
AleI CACNNNNGTG 1 cut(s) 1461
Alw26I GTCTC 3 cut(s) 552, 870, 1520
AlwI GGATC 1 cut(s) 12
AlwNI CAGNNNCTG 3 cut(s) 508, 803, 1607
Ama87I CYCGRG 1 cut(s) 1572
AoxI GGCC 2 cut(s) 216, 1561
ApeKI GCWGC 8 cut(s) 38, 41, 74, 1333, 1336, 1358, 1520, 1666
ApoI RAATTY 1 cut(s) 638
ArsI GACNNNNNNTTYG 2 cut(s) 779, 811
AseI ATTAAT 1 cut(s) 396
Asp700I GAANNNNTTC 1 cut(s) 1470
AspLEI GCGC 2 cut(s) 38, 234
AspS9I GGNCC 1 cut(s) 217
AsuC2I CCSGG 2 cut(s) 1573, 1574
AsuHPI GGTGA 3 cut(s) 247, 282, 608
AvaI CYCGRG 1 cut(s) 1572
AxyI CCTNAGG 1 cut(s) 132
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 231
BanII GRGCYC 1 cut(s) 1641
BauI CACGAG 1 cut(s) 1233
BbsI GAAGAC 2 cut(s) 1429, 1526
BbvI GCAGC 8 cut(s) 25, 28, 86, 1323, 1345, 1370, 1532, 1653
BccI CCATC 6 cut(s) 551, 752, 839, 1020, 1092, 1133
BciT130I CCWGG 3 cut(s) 294, 660, 1662
BciVI GTATCC 1 cut(s) 371
BclI TGATCA 1 cut(s) 1237
BcnI CCSGG 2 cut(s) 1573, 1574
BcoDI GTCTC 3 cut(s) 552, 870, 1520
BfaI CTAG 4 cut(s) 948, 966, 1307, 1515
BfmI CTRYAG 2 cut(s) 366, 1129
BfoI RGCGCY 2 cut(s) 39, 235
BfuAI ACCTGC 1 cut(s) 1452
BfuI GTATCC 1 cut(s) 371
BglII AGATCT 1 cut(s) 101
BisI GCNGC 9 cut(s) 39, 42, 75, 1059, 1334, 1337, 1359, 1521, 1667
BlpI GCTNAGC 1 cut(s) 1493
BlsI GCNGC 9 cut(s) 40, 43, 76, 1060, 1335, 1338, 1360, 1522, 1668
Bme1390I CCNGG 5 cut(s) 294, 660, 1573, 1574, 1662
BmeT110I CYCGRG 1 cut(s) 1572
BmgT120I GGNCC 1 cut(s) 217
BmiI GGNNCC 4 cut(s) 6, 154, 233, 1400
BmrFI CCNGG 5 cut(s) 294, 660, 1573, 1574, 1662
BmrI ACTGGG 2 cut(s) 459, 1119
BmsI GCATC 2 cut(s) 1045, 1183
BmuI ACTGGG 2 cut(s) 459, 1119
BpiI GAAGAC 2 cut(s) 1429, 1526
BpmI CTGGAG 1 cut(s) 1209
Bpu1102I GCTNAGC 1 cut(s) 1493
BpuEI CTTGAG 3 cut(s) 1054, 1359, 1466
BpuMI CCSGG 2 cut(s) 1573, 1574
BsaAI YACGTR 1 cut(s) 1459
BsaHI GRCGYC 1 cut(s) 232
BsaI GGTCTC 1 cut(s) 552
BsaJI CCNNGG 6 cut(s) 491, 658, 659, 1572, 1573, 1661
BsaXI ACNNNNNCTCC 2 cut(s) 1182, 1212
Bse1I ACTGG 7 cut(s) 465, 605, 699, 1114, 1192, 1601, 1629
Bse21I CCTNAGG 1 cut(s) 132
Bse3DI GCAATG 2 cut(s) 538, 1423
BseBI CCWGG 3 cut(s) 294, 660, 1662
BseDI CCNNGG 6 cut(s) 491, 658, 659, 1572, 1573, 1661
BseGI GGATG 7 cut(s) 188, 434, 454, 859, 953, 1031, 1440
BseMI GCAATG 2 cut(s) 538, 1423
BseMII CTCAG 7 cut(s) 112, 146, 686, 752, 1025, 1310, 1484
BseNI ACTGG 7 cut(s) 465, 605, 699, 1114, 1192, 1601, 1629
BseXI GCAGC 8 cut(s) 25, 28, 86, 1323, 1345, 1370, 1532, 1653
BsgI GTGCAG 1 cut(s) 813
Bsh1236I CGCG 1 cut(s) 1152
BshFI GGCC 2 cut(s) 218, 1563
BshNI GGYRCC 1 cut(s) 231
BsiHKCI CYCGRG 1 cut(s) 1572
BsiSI CCGG 2 cut(s) 1573, 1589
BsmAI GTCTC 3 cut(s) 552, 870, 1520
BsmBI CGTCTC 2 cut(s) 870, 1520
BsmI GAATGC 2 cut(s) 936, 1261
BsnI GGCC 2 cut(s) 218, 1563
Bso31I GGTCTC 1 cut(s) 552
BsoBI CYCGRG 1 cut(s) 1572
Bsp1286I GDGCHC 1 cut(s) 1641
Bsp1407I TGTACA 1 cut(s) 1609
Bsp143I GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
Bsp1720I GCTNAGC 1 cut(s) 1493
BspACI CCGC 4 cut(s) 317, 1059, 1152, 1222
BspANI GGCC 2 cut(s) 218, 1563
BspCNI CTCAG 7 cut(s) 111, 145, 685, 751, 1024, 1311, 1485
BspFNI CGCG 1 cut(s) 1152
BspHI TCATGA 2 cut(s) 538, 579
BspLI GGNNCC 4 cut(s) 6, 154, 233, 1400
BspMI ACCTGC 1 cut(s) 1452
BspPI GGATC 1 cut(s) 12
BspQI GCTCTTC 2 cut(s) 1114, 1476
BspT107I GGYRCC 1 cut(s) 231
BspTNI GGTCTC 1 cut(s) 552
BsrDI GCAATG 2 cut(s) 538, 1423
BsrGI TGTACA 1 cut(s) 1609
BsrI ACTGG 7 cut(s) 465, 605, 699, 1114, 1192, 1601, 1629
BssECI CCNNGG 6 cut(s) 491, 658, 659, 1572, 1573, 1661
BssMI GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
BssNAI GTATAC 1 cut(s) 1212
BssNI GRCGYC 1 cut(s) 232
BssSI CACGAG 1 cut(s) 1233
BssT1I CCWWGG 1 cut(s) 491
Bst1107I GTATAC 1 cut(s) 1212
Bst2BI CACGAG 1 cut(s) 1233
Bst2UI CCWGG 3 cut(s) 294, 660, 1662
Bst4CI ACNGT 4 cut(s) 341, 354, 654, 1133
Bst6I CTCTTC 3 cut(s) 1114, 1476, 1626
BstACI GRCGYC 1 cut(s) 232
BstAPI GCANNNNNTGC 1 cut(s) 1345
BstAUI TGTACA 1 cut(s) 1609
BstBAI YACGTR 1 cut(s) 1459
BstC8I GCNNGC 3 cut(s) 46, 1246, 1272
BstDEI CTNAG 8 cut(s) 98, 132, 672, 738, 809, 1011, 1319, 1493
BstF5I GGATG 7 cut(s) 188, 434, 454, 859, 953, 1031, 1440
BstFNI CGCG 1 cut(s) 1152
BstH2I RGCGCY 2 cut(s) 39, 235
BstHHI GCGC 2 cut(s) 38, 234
BstKTI GATC 7 cut(s) 7, 104, 178, 454, 808, 1219, 1240
BstMAI GTCTC 3 cut(s) 552, 870, 1520
BstMBI GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
BstMWI GCNNNNNNNGC 8 cut(s) 50, 238, 1058, 1166, 1280, 1345, 1520, 1666
BstNI CCWGG 3 cut(s) 294, 660, 1662
BstNSI RCATGY 1 cut(s) 1348
BstSCI CCNGG 5 cut(s) 292, 658, 1571, 1572, 1660
BstSFI CTRYAG 2 cut(s) 366, 1129
BstUI CGCG 1 cut(s) 1152
BstV1I GCAGC 8 cut(s) 25, 28, 86, 1323, 1345, 1370, 1532, 1653
BstV2I GAAGAC 2 cut(s) 1429, 1526
BstX2I RGATCY 2 cut(s) 4, 101
BstXI CCANNNNNNTGG 1 cut(s) 896
BstYI RGATCY 2 cut(s) 4, 101
BstZ17I GTATAC 1 cut(s) 1212
Bsu36I CCTNAGG 1 cut(s) 132
BsuI GTATCC 1 cut(s) 371
BsuRI GGCC 2 cut(s) 218, 1563
BtsCI GGATG 7 cut(s) 188, 434, 454, 859, 953, 1031, 1440
BtsI GCAGTG 2 cut(s) 379, 1509
BtsIMutI CAGTG 5 cut(s) 346, 379, 706, 1138, 1509
BveI ACCTGC 1 cut(s) 1452
Cac8I GCNNGC 3 cut(s) 46, 1246, 1272
CaiI CAGNNNCTG 3 cut(s) 508, 803, 1607
CciI TCATGA 2 cut(s) 538, 579
CfoI GCGC 2 cut(s) 38, 234
Cfr13I GGNCC 1 cut(s) 217
Cfr9I CCCGGG 1 cut(s) 1572
CsiI ACCWGGT 1 cut(s) 292
Csp6I GTAC 2 cut(s) 1610, 1684
CspCI CAANNNNNGTGG 2 cut(s) 209, 244
CviQI GTAC 2 cut(s) 1610, 1684
DdeI CTNAG 8 cut(s) 98, 132, 672, 738, 809, 1011, 1319, 1493
DinI GGCGCC 1 cut(s) 233
DpnI GATC 7 cut(s) 6, 103, 177, 453, 807, 1218, 1239
DpnII GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
DraI TTTAAA 1 cut(s) 63
DrdI GACNNNNNNGTC 1 cut(s) 269
DseDI GACNNNNNNGTC 1 cut(s) 269
Eam1104I CTCTTC 3 cut(s) 1114, 1476, 1626
EarI CTCTTC 3 cut(s) 1114, 1476, 1626
Eco130I CCWWGG 1 cut(s) 491
Eco24I GRGCYC 1 cut(s) 1641
Eco31I GGTCTC 1 cut(s) 552
Eco32I GATATC 1 cut(s) 253
Eco57I CTGAAG 2 cut(s) 972, 1520
Eco81I CCTNAGG 1 cut(s) 132
Eco88I CYCGRG 1 cut(s) 1572
EcoRII CCWGG 3 cut(s) 292, 658, 1660
EcoRV GATATC 1 cut(s) 253
EcoT14I CCWWGG 1 cut(s) 491
EcoT22I ATGCAT 3 cut(s) 477, 1261, 1350
EcoT38I GRGCYC 1 cut(s) 1641
EgeI GGCGCC 1 cut(s) 233
EheI GGCGCC 1 cut(s) 233
ErhI CCWWGG 1 cut(s) 491
Esp3I CGTCTC 2 cut(s) 870, 1520
FalI AAGNNNNNCTT 4 cut(s) 1063, 1095, 1272, 1304
FauI CCCGC 2 cut(s) 310, 1215
FauNDI CATATG 2 cut(s) 477, 1350
FbaI TGATCA 1 cut(s) 1237
FblI GTMKAC 1 cut(s) 1211
Fnu4HI GCNGC 9 cut(s) 39, 42, 75, 1059, 1334, 1337, 1359, 1521, 1667
FokI GGATG 7 cut(s) 175, 421, 461, 846, 940, 1038, 1447
FriOI GRGCYC 1 cut(s) 1641
Fsp4HI GCNGC 9 cut(s) 39, 42, 75, 1059, 1334, 1337, 1359, 1521, 1667
FspBI CTAG 4 cut(s) 948, 966, 1307, 1515
GlaI GCGC 2 cut(s) 37, 233
GluI GCNGC 9 cut(s) 39, 42, 75, 1059, 1334, 1337, 1359, 1521, 1667
GsuI CTGGAG 1 cut(s) 1209
HaeII RGCGCY 2 cut(s) 39, 235
HaeIII GGCC 2 cut(s) 218, 1563
HapII CCGG 2 cut(s) 1573, 1589
HhaI GCGC 2 cut(s) 38, 234
Hin1I GRCGYC 1 cut(s) 232
Hin6I GCGC 2 cut(s) 36, 232
HinP1I GCGC 2 cut(s) 36, 232
HincII GTYRAC 2 cut(s) 483, 735
HindII GTYRAC 2 cut(s) 483, 735
HpaII CCGG 2 cut(s) 1573, 1589
HphI GGTGA 3 cut(s) 247, 282, 608
Hpy166II GTNNAC 6 cut(s) 483, 650, 691, 735, 1212, 1580
Hpy188I TCNGA 8 cut(s) 101, 208, 415, 510, 675, 919, 1164, 1680
Hpy8I GTNNAC 6 cut(s) 483, 650, 691, 735, 1212, 1580
HpyAV CCTTC 4 cut(s) 19, 117, 1306, 1348
HpyCH4III ACNGT 4 cut(s) 341, 354, 654, 1133
HpyCH4IV ACGT 1 cut(s) 1458
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 238, 1058, 1166, 1280, 1345, 1520, 1666
HpyF3I CTNAG 8 cut(s) 98, 132, 672, 738, 809, 1011, 1319, 1493
HpySE526I ACGT 1 cut(s) 1458
Hsp92I GRCGYC 1 cut(s) 232
HspAI GCGC 2 cut(s) 36, 232
KasI GGCGCC 1 cut(s) 231
Ksp22I TGATCA 1 cut(s) 1237
Kzo9I GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
LguI GCTCTTC 2 cut(s) 1114, 1476
LmnI GCTCC 4 cut(s) 246, 745, 805, 1174
Lsp1109I GCAGC 8 cut(s) 25, 28, 86, 1323, 1345, 1370, 1532, 1653
LweI GCATC 2 cut(s) 1045, 1183
MabI ACCWGGT 1 cut(s) 292
MaeI CTAG 4 cut(s) 948, 966, 1307, 1515
MaeII ACGT 1 cut(s) 1458
MaeIII GTNAC 3 cut(s) 288, 707, 1616
MalI GATC 7 cut(s) 6, 103, 177, 453, 807, 1218, 1239
MboI GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
MboII GAAGA 8 cut(s) 135, 293, 1131, 1434, 1463, 1526, 1640, 1643
MflI RGATCY 2 cut(s) 4, 101
MhlI GDGCHC 1 cut(s) 1641
MluCI AATT 5 cut(s) 202, 224, 624, 638, 1001
Mly113I GGCGCC 1 cut(s) 232
MlyI GAGTC 5 cut(s) 194, 296, 730, 1003, 1141
MmeI TCCRAC 5 cut(s) 723, 853, 863, 1273, 1534
Mph1103I ATGCAT 3 cut(s) 477, 1261, 1350
MroXI GAANNNNTTC 1 cut(s) 1470
MseI TTAA 9 cut(s) 62, 267, 396, 422, 627, 713, 768, 942, 1326
MslI CAYNNNNRTG 3 cut(s) 476, 1349, 1461
MspA1I CMGCKG 2 cut(s) 992, 1336
MspI CCGG 2 cut(s) 1573, 1589
MspR9I CCNGG 5 cut(s) 294, 660, 1573, 1574, 1662
Mva1269I GAATGC 2 cut(s) 936, 1261
MvaI CCWGG 3 cut(s) 294, 660, 1662
MvnI CGCG 1 cut(s) 1152
MwoI GCNNNNNNNGC 8 cut(s) 50, 238, 1058, 1166, 1280, 1345, 1520, 1666
NarI GGCGCC 1 cut(s) 232
NciI CCSGG 2 cut(s) 1573, 1574
NdeI CATATG 2 cut(s) 477, 1350
NdeII GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
NlaIV GGNNCC 4 cut(s) 6, 154, 233, 1400
NmuCI GTSAC 2 cut(s) 288, 707
NsiI ATGCAT 3 cut(s) 477, 1261, 1350
NspI RCATGY 1 cut(s) 1348
OliI CACNNNNGTG 1 cut(s) 1461
PagI TCATGA 2 cut(s) 538, 579
PasI CCCWGGG 1 cut(s) 659
PciSI GCTCTTC 2 cut(s) 1114, 1476
PctI GAATGC 2 cut(s) 936, 1261
PdmI GAANNNNTTC 1 cut(s) 1470
PfeI GAWTC 5 cut(s) 505, 576, 781, 1016, 1379
PflFI GACNNNGTC 1 cut(s) 793
PflMI CCANNNNNTGG 3 cut(s) 299, 492, 845
PkrI GCNGC 9 cut(s) 40, 43, 76, 1060, 1335, 1338, 1360, 1522, 1668
PleI GAGTC 5 cut(s) 193, 295, 730, 1003, 1141
PluTI GGCGCC 1 cut(s) 235
PpsI GAGTC 5 cut(s) 193, 295, 730, 1003, 1141
Ppu21I YACGTR 1 cut(s) 1459
PshBI ATTAAT 1 cut(s) 396
Psp6I CCWGG 3 cut(s) 292, 658, 1660
PspGI CCWGG 3 cut(s) 292, 658, 1660
PspN4I GGNNCC 4 cut(s) 6, 154, 233, 1400
PspPI GGNCC 1 cut(s) 217
PstNI CAGNNNCTG 3 cut(s) 508, 803, 1607
PsuI RGATCY 2 cut(s) 4, 101
PsyI GACNNNGTC 1 cut(s) 793
PvuII CAGCTG 2 cut(s) 992, 1336
RsaI GTAC 2 cut(s) 1611, 1685
RsaNI GTAC 2 cut(s) 1610, 1684
RseI CAYNNNNRTG 3 cut(s) 476, 1349, 1461
SapI GCTCTTC 2 cut(s) 1114, 1476
SaqAI TTAA 9 cut(s) 62, 267, 396, 422, 627, 713, 768, 942, 1326
SatI GCNGC 9 cut(s) 39, 42, 75, 1059, 1334, 1337, 1359, 1521, 1667
Sau3AI GATC 7 cut(s) 4, 101, 175, 451, 805, 1216, 1237
Sau96I GGNCC 1 cut(s) 217
SchI GAGTC 5 cut(s) 194, 296, 730, 1003, 1141
ScrFI CCNGG 5 cut(s) 294, 660, 1573, 1574, 1662
SduI GDGCHC 1 cut(s) 1641
SexAI ACCWGGT 1 cut(s) 292
SfaNI GCATC 2 cut(s) 1045, 1183
SfcI CTRYAG 2 cut(s) 366, 1129
SfoI GGCGCC 1 cut(s) 233
SmaI CCCGGG 1 cut(s) 1574
SmiMI CAYNNNNRTG 3 cut(s) 476, 1349, 1461
SmlI CTYRAG 3 cut(s) 1069, 1374, 1481
SmoI CTYRAG 3 cut(s) 1069, 1374, 1481
Sse9I AATT 5 cut(s) 202, 224, 624, 638, 1001
SsiI CCGC 4 cut(s) 317, 1059, 1152, 1222
SspDI GGCGCC 1 cut(s) 231
SspMI CTAG 4 cut(s) 948, 966, 1307, 1515
StyD4I CCNGG 5 cut(s) 292, 658, 1571, 1572, 1660
StyI CCWWGG 1 cut(s) 491
TaaI ACNGT 4 cut(s) 341, 354, 654, 1133
TaiI ACGT 1 cut(s) 1461
TaqI TCGA 5 cut(s) 12, 178, 197, 910, 1672
TasI AATT 5 cut(s) 202, 224, 624, 638, 1001
TatI WGTACW 2 cut(s) 1609, 1683
TauI GCSGC 1 cut(s) 1061
TfiI GAWTC 5 cut(s) 505, 576, 781, 1016, 1379
Tru1I TTAA 9 cut(s) 62, 267, 396, 422, 627, 713, 768, 942, 1326
Tru9I TTAA 9 cut(s) 62, 267, 396, 422, 627, 713, 768, 942, 1326
TscAI CASTG 5 cut(s) 346, 379, 706, 1138, 1516
TseFI GTSAC 2 cut(s) 288, 707
TseI GCWGC 8 cut(s) 38, 41, 74, 1333, 1336, 1358, 1520, 1666
Tsp45I GTSAC 2 cut(s) 288, 707
TspDTI ATGAA 9 cut(s) 99, 135, 460, 568, 596, 786, 794, 1367, 1463
TspGWI ACGGA 2 cut(s) 951, 1267
TspMI CCCGGG 1 cut(s) 1572
TspRI CASTG 5 cut(s) 346, 379, 706, 1138, 1516
Tth111I GACNNNGTC 1 cut(s) 793
Van91I CCANNNNNTGG 3 cut(s) 299, 492, 845
VspI ATTAAT 1 cut(s) 396
XapI RAATTY 1 cut(s) 638
XbaI TCTAGA 1 cut(s) 965
XceI RCATGY 1 cut(s) 1348
XmaI CCCGGG 1 cut(s) 1572
XmiI GTMKAC 1 cut(s) 1211
XmnI GAANNNNTTC 1 cut(s) 1470
XspI CTAG 4 cut(s) 948, 966, 1307, 1515
Zsp2I ATGCAT 3 cut(s) 477, 1261, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.