Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005716.1

Orthogroup ID

OG0007155

Physical Location & Seq

Genomic Coordinates Forward (+)

40911 .. 44908

Gene Structure 3998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

atgcacggacttcctcggcgagctccgaagccagaagaagaagaagctctagccgccaaagccaaagacctccgcgctcttcagactcagctcctctccaaccaccacagcaaggtttacaccaaggaagctctcgatgtaagcgccaagctcctcgagaaaaaccccgagtgctacaccgcctggaattaccgaaagctcgccgtccagcacaacctcctcgccgttcagtccgactccgactccgactccgattccggcgcgatcaaggctattctcgacctggaactgaaagtggtggtggatgcgttgaagcagaattataagtcgtatggagcttggcatcatcggaaatgggtgctgagcaaggggcattgttctttagactatgaactgaagcttctcaaaaagtttcagaccgcggattcccggaatttccatgcttggaattaccggagatttgtagctgcattgttgaacagatcagagaaggaagaattggattataccaccgaaatgatcgaaaacaatttcagcaattactcggcctggcacaatcgtagtgtactcctgtcgagtttgctgaagaaagaagctccagggttctttccaaaagagaaagttctgaatgatgagtatgggattgtacaacaagctatttttacagatccagatgatcaaagcggttggtttcactatcgttggcttcttgatcagacggggaaaatggatgctcctttacttgcttcttcttggcctgcccatggatccaatgtcattctatcaagaaataggcacttatatgattgttcggcatcaccttttgatagtttccattccgattcaggaacatttccactggttctatattttaatcaagctgtcaaaggtgtaaattcatctaccgtagctattgaatcttcattttgcacagaagatcttgattggaaaccacttttacaaattagctcccagttttcccaagtttgggttacacaaatccaatttccagaagcaaactcccagtatgaagaagcctgtgcagtggaagttagtgtcggactgtctcagggtattgtttcttcaagtggttttgactatagccatcttacacggttggccttcaaagtgtgtctgtcccctgttgacactgaaccgtctaaaacgcagggcagggatcaaattttgtggagagatgaaaatttctccttgtaccaaacacgatctgaggagccacccaaatcactctctattgataatctaataattcacaatgttgataagccaacgacttcaaattggcgtgcagagactattgctaatgaaattgctattttccgagagttgttgtcagagacaagctgtaaaattggaaaacttacgttggcaagattactaacagcttatgatgttattcagtctcaatgtgcaaacaaaatggtcaattctgaagaagttctggagctttatgctgacctactaaagttggacccgacacattgtcagtattacaaagatgagcacagcttagttttcttgcagcagttaacttctagtaaggagtctctgctgaaacactgctttagccataaaaccctggcttcttcaagcattggcaattacacatgtctatgtctaaataagttatccctaacgcggatgggatccattgaaaaattattgtgggttcaaatgctggacctcagccacaatgaacttcattcaattgaaggattggaggccatgcagcttctatcttgcttaaatctgagtaacaacaagcttggtagttttactgctcttgcacctttgagaatgttgaagtctctacaagtgctggatatatcatacaatgagataggttcacacactatcgacaagacaaggtatctattctcgtctcctctttgtcacacagaagaaattagttggaacaaggacgaaaatgtgaatggatgtatcaatctgacaaattattgggatgctttcctgatatttaaaagcatgagcttgacacaattttccatattggggaatacaattgctggtgaaaacttcaagtcgtttttggtcaaggcagttcctactctcgagtggctggatggcgataaattgcactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003008 GO:0003674 GO:0003824 GO:0004659 GO:0004661 GO:0004663 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0005968 GO:0006464 GO:0006807 GO:0007600 GO:0007601 GO:0008150 GO:0008152 GO:0008318 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0016020 GO:0016740 GO:0016765 GO:0017016 GO:0017137 GO:0018342 GO:0018344 GO:0019538 GO:0019899 GO:0031267 GO:0031974 GO:0031981 GO:0032501 GO:0032991 GO:0036211 GO:0042221 GO:0042981 GO:0043067 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050877 GO:0050896 GO:0050953 GO:0051020 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097354 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_4 LRR_6 PPTA

Protein Analysis

706

Amino Acids

80.17

Weight (kDa)

5.91

Isoelectric Point (pI)

45.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPTA	PF01239	42 - 71	2.6e-07	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	94 - 123	2.4e-06	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	164 - 193	1.1e-08	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	210 - 239	7.3e-06	Protein prenyltransferase alpha subunit repeat
LRR_4	PF12799	563 - 602	8.2e-06	Leucine Rich repeats (2 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24490 AT4G24490 AT5G41820 AT5G41820
fragaria_vesca	FvH4_5g35190 FvH4_5g35190 FvH4_5g35190 FvH4_5g35190
malus_domestica	MD08G1200000.v1.1 MD15G1387100.v1.1
prunus_persica	Prupe.1G533400_v2.0.a1 Prupe.1G572600_v2.0.a1
pyrus_communis	pycom08g17340 pycom15g34720
rosa_chinensis	RchiOBHm_Chr7g0236311
rosa_laevigata	RLG00000001088
rosa_multiflora	Rmu_sc0005716.1_g000009 Rmu_sc0006268.1_g000006
rosa_roxburghii	Rroxscaffold_3G00225260
rosa_rugosa	Rorug07G0295400
rosa_samantha	Rh7AG450600 Rh7BG422100 Rh7CG470300 Rh7DG439600
rosa_wichuraiana	Rw7G037450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	324
AccII	CGCG	4 cut(s)	75, 263, 422, 1657
AciI	CCGC	7 cut(s)	54, 73, 180, 420, 422, 684, 1657
AclWI	GGATC	6 cut(s)	662, 762, 775, 1185, 1659, 1672
AcsI	RAATTY	4 cut(s)	433, 895, 1182, 1201
AcuI	CTGAAG	4 cut(s)	65, 416, 605, 1470
AfaI	GTAC	3 cut(s)	567, 648, 1214
AfiI	CCNNNNNNNGG	6 cut(s)	112, 764, 987, 988, 1656, 2031
AflIII	ACRYGT	1 cut(s)	1625
AhdI	GACNNNNNGTC	1 cut(s)	1500
AjnI	CCWGG	5 cut(s)	182, 282, 548, 598, 1596
AjuI	GAANNNNNNNTTGG	2 cut(s)	482, 514
Alw21I	GWGCWC	2 cut(s)	25, 1524
Alw26I	GTCTC	7 cut(s)	1071, 1304, 1349, 1425, 1569, 1830, 1905
AlwI	GGATC	6 cut(s)	662, 762, 775, 1185, 1659, 1672
Ama87I	CYCGRG	3 cut(s)	155, 167, 2090
AoxI	GGCC	4 cut(s)	546, 755, 1119, 1740
ApeKI	GCWGC	3 cut(s)	467, 1540, 1747
ApoI	RAATTY	4 cut(s)	433, 895, 1182, 1201
Asp700I	GAANNNNTTC	1 cut(s)	1455
AspLEI	GCGC	3 cut(s)	77, 146, 263
AspS9I	GGNCC	2 cut(s)	1489, 1699
AsuC2I	CCSGG	1 cut(s)	430
AsuHPI	GGTGA	2 cut(s)	810, 2060
AvaI	CYCGRG	3 cut(s)	155, 167, 2090
AvaII	GGWCC	2 cut(s)	1489, 1699
BamHI	GGATCC	2 cut(s)	767, 1664
BanII	GRGCYC	1 cut(s)	25
BarI	GAAGNNNNNNTAC	2 cut(s)	1066, 1098
Bbv12I	GWGCWC	2 cut(s)	25, 1524
BbvCI	CCTCAGC	1 cut(s)	1703
BbvI	GCAGC	3 cut(s)	454, 1552, 1759
BccI	CCATC	3 cut(s)	1113, 1654, 2096
BceAI	ACGGC	2 cut(s)	188, 209
BciT130I	CCWGG	5 cut(s)	184, 284, 550, 600, 1598
BclI	TGATCA	2 cut(s)	676, 712
BcnI	CCSGG	1 cut(s)	430
BcoDI	GTCTC	7 cut(s)	1071, 1304, 1349, 1425, 1569, 1830, 1905
BfaI	CTAG	2 cut(s)	50, 1554
BfmI	CTRYAG	1 cut(s)	1099
BfoI	RGCGCY	1 cut(s)	147
BglII	AGATCT	1 cut(s)	937
BisI	GCNGC	4 cut(s)	54, 468, 1541, 1748
BlpI	GCTNAGC	1 cut(s)	362
BlsI	GCNGC	4 cut(s)	55, 469, 1542, 1749
Bme1390I	CCNGG	6 cut(s)	184, 284, 430, 550, 600, 1598
Bme18I	GGWCC	2 cut(s)	1489, 1699
BmeRI	GACNNNNNGTC	1 cut(s)	1500
BmeT110I	CYCGRG	3 cut(s)	155, 167, 2090
BmgT120I	GGNCC	2 cut(s)	1489, 1699
BmiI	GGNNCC	4 cut(s)	769, 1233, 1491, 1666
BmrFI	CCNGG	6 cut(s)	184, 284, 430, 550, 600, 1598
BmrI	ACTGGG	2 cut(s)	967, 1018
BmsI	GCATC	5 cut(s)	295, 352, 721, 824, 1972
BmuI	ACTGGG	2 cut(s)	967, 1018
BpmI	CTGGAG	2 cut(s)	582, 1481
Bpu10I	CCTNAGC	1 cut(s)	1703
Bpu1102I	GCTNAGC	1 cut(s)	362
BpuMI	CCSGG	1 cut(s)	430
BsaJI	CCNNGG	6 cut(s)	14, 123, 420, 599, 763, 1596
BsaWI	WCCGGW	1 cut(s)	453
BsaXI	ACNNNNNCTCC	4 cut(s)	227, 233, 257, 263
Bsc4I	CCNNNNNNNGG	6 cut(s)	112, 764, 987, 988, 1656, 2031
Bse1I	ACTGG	3 cut(s)	864, 973, 1024
BseBI	CCWGG	5 cut(s)	184, 284, 550, 600, 1598
BseDI	CCNNGG	6 cut(s)	14, 123, 420, 599, 763, 1596
BseGI	GGATG	6 cut(s)	310, 736, 1665, 1961, 1987, 2107
BseLI	CCNNNNNNNGG	6 cut(s)	112, 764, 987, 988, 1656, 2031
BseMII	CTCAG	6 cut(s)	101, 353, 1082, 1218, 1717, 1760
BseNI	ACTGG	3 cut(s)	864, 973, 1024
BseRI	GAGGAG	5 cut(s)	83, 143, 209, 1244, 1893
BseXI	GCAGC	3 cut(s)	454, 1552, 1759
BsgI	GTGCAG	2 cut(s)	1062, 1326
Bsh1236I	CGCG	4 cut(s)	75, 263, 422, 1657
BshFI	GGCC	4 cut(s)	548, 757, 1121, 1742
BsiHKAI	GWGCWC	2 cut(s)	25, 1524
BsiHKCI	CYCGRG	3 cut(s)	155, 167, 2090
BsiSI	CCGG	3 cut(s)	258, 430, 454
BslFI	GGGAC	1 cut(s)	1123
BslI	CCNNNNNNNGG	6 cut(s)	112, 764, 987, 988, 1656, 2031
BsmAI	GTCTC	7 cut(s)	1071, 1304, 1349, 1425, 1569, 1830, 1905
BsmBI	CGTCTC	1 cut(s)	1905
BsmFI	GGGAC	1 cut(s)	1123
BsnI	GGCC	4 cut(s)	548, 757, 1121, 1742
BsoBI	CYCGRG	3 cut(s)	155, 167, 2090
Bsp1286I	GDGCHC	2 cut(s)	25, 1524
Bsp1407I	TGTACA	1 cut(s)	646
Bsp1720I	GCTNAGC	1 cut(s)	362
Bsp19I	CCATGG	1 cut(s)	763
BspACI	CCGC	7 cut(s)	54, 73, 180, 420, 422, 684, 1657
BspANI	GGCC	4 cut(s)	548, 757, 1121, 1742
BspCNI	CTCAG	6 cut(s)	100, 354, 1081, 1219, 1716, 1761
BspFNI	CGCG	4 cut(s)	75, 263, 422, 1657
BspLI	GGNNCC	4 cut(s)	769, 1233, 1491, 1666
BspPI	GGATC	6 cut(s)	662, 762, 775, 1185, 1659, 1672
BspQI	GCTCTTC	1 cut(s)	84
BsrGI	TGTACA	1 cut(s)	646
BsrI	ACTGG	3 cut(s)	864, 973, 1024
BssECI	CCNNGG	6 cut(s)	14, 123, 420, 599, 763, 1596
BssT1I	CCWWGG	2 cut(s)	123, 763
Bst2UI	CCWGG	5 cut(s)	184, 284, 550, 600, 1598
Bst4CI	ACNGT	4 cut(s)	907, 1065, 1116, 1158
Bst6I	CTCTTC	1 cut(s)	84
BstAUI	TGTACA	1 cut(s)	646
BstC8I	GCNNGC	4 cut(s)	21, 201, 759, 1305
BstDEI	CTNAG	7 cut(s)	87, 362, 1068, 1227, 1528, 1703, 1769
BstDSI	CCRYGG	2 cut(s)	420, 763
BstF5I	GGATG	6 cut(s)	310, 736, 1665, 1961, 1987, 2107
BstFNI	CGCG	4 cut(s)	75, 263, 422, 1657
BstH2I	RGCGCY	1 cut(s)	147
BstHHI	GCGC	3 cut(s)	77, 146, 263
BstMAI	GTCTC	7 cut(s)	1071, 1304, 1349, 1425, 1569, 1830, 1905
BstMWI	GCNNNNNNNGC	3 cut(s)	53, 59, 269
BstNI	CCWGG	5 cut(s)	184, 284, 550, 600, 1598
BstNSI	RCATGY	1 cut(s)	1629
BstSCI	CCNGG	6 cut(s)	182, 282, 428, 548, 598, 1596
BstSFI	CTRYAG	1 cut(s)	1099
BstUI	CGCG	4 cut(s)	75, 263, 422, 1657
BstV1I	GCAGC	3 cut(s)	454, 1552, 1759
BstX2I	RGATCY	4 cut(s)	667, 767, 937, 1664
BstYI	RGATCY	4 cut(s)	667, 767, 937, 1664
BsuRI	GGCC	4 cut(s)	548, 757, 1121, 1742
BtgI	CCRYGG	2 cut(s)	420, 763
BtsCI	GGATG	6 cut(s)	310, 736, 1665, 1961, 1987, 2107
BtsI	GCAGTG	2 cut(s)	1050, 1576
BtsIMutI	CAGTG	5 cut(s)	857, 1050, 1149, 1576, 2116
Cac8I	GCNNGC	4 cut(s)	21, 201, 759, 1305
CfoI	GCGC	3 cut(s)	77, 146, 263
Cfr13I	GGNCC	2 cut(s)	1489, 1699
Cfr42I	CCGCGG	1 cut(s)	423
Csp6I	GTAC	3 cut(s)	566, 647, 1213
CspCI	CAANNNNNGTGG	2 cut(s)	1169, 1204
CviAII	CATG	5 cut(s)	440, 764, 1626, 1744, 2005
CviQI	GTAC	3 cut(s)	566, 647, 1213
DdeI	CTNAG	7 cut(s)	87, 362, 1068, 1227, 1528, 1703, 1769
DraI	TTTAAA	1 cut(s)	1999
DriI	GACNNNNNGTC	1 cut(s)	1500
Eam1104I	CTCTTC	1 cut(s)	84
Eam1105I	GACNNNNNGTC	1 cut(s)	1500
EarI	CTCTTC	1 cut(s)	84
Ecl136II	GAGCTC	1 cut(s)	23
Eco130I	CCWWGG	2 cut(s)	123, 763
Eco24I	GRGCYC	1 cut(s)	25
Eco47I	GGWCC	2 cut(s)	1489, 1699
Eco53kI	GAGCTC	1 cut(s)	23
Eco57I	CTGAAG	4 cut(s)	65, 416, 605, 1470
Eco88I	CYCGRG	3 cut(s)	155, 167, 2090
EcoICRI	GAGCTC	1 cut(s)	23
EcoRII	CCWGG	5 cut(s)	182, 282, 548, 598, 1596
EcoT14I	CCWWGG	2 cut(s)	123, 763
EcoT38I	GRGCYC	1 cut(s)	25
ErhI	CCWWGG	2 cut(s)	123, 763
Esp3I	CGTCTC	1 cut(s)	1905
FaeI	CATG	5 cut(s)	443, 767, 1629, 1747, 2008
FaqI	GGGAC	1 cut(s)	1123
FatI	CATG	5 cut(s)	439, 763, 1625, 1743, 2004
FbaI	TGATCA	2 cut(s)	676, 712
Fnu4HI	GCNGC	4 cut(s)	54, 468, 1541, 1748
FokI	GGATG	6 cut(s)	317, 743, 1672, 1968, 1994, 2114
FriOI	GRGCYC	1 cut(s)	25
Fsp4HI	GCNGC	4 cut(s)	54, 468, 1541, 1748
FspBI	CTAG	2 cut(s)	50, 1554
GlaI	GCGC	3 cut(s)	76, 145, 262
GluI	GCNGC	4 cut(s)	54, 468, 1541, 1748
GsuI	CTGGAG	2 cut(s)	582, 1481
HaeII	RGCGCY	1 cut(s)	147
HaeIII	GGCC	4 cut(s)	548, 757, 1121, 1742
HapII	CCGG	3 cut(s)	258, 430, 454
HhaI	GCGC	3 cut(s)	77, 146, 263
Hin1II	CATG	5 cut(s)	443, 767, 1629, 1747, 2008
Hin6I	GCGC	3 cut(s)	75, 144, 261
HinP1I	GCGC	3 cut(s)	75, 144, 261
HincII	GTYRAC	2 cut(s)	1147, 1548
HindII	GTYRAC	2 cut(s)	1147, 1548
HindIII	AAGCTT	2 cut(s)	398, 1781
HinfI	GANTC	9 cut(s)	85, 236, 242, 248, 254, 425, 842, 917, 1562
HpaI	GTTAAC	1 cut(s)	1548
HpaII	CCGG	3 cut(s)	258, 430, 454
HphI	GGTGA	2 cut(s)	810, 2060
Hpy166II	GTNNAC	5 cut(s)	118, 566, 1147, 1548, 1865
Hpy8I	GTNNAC	5 cut(s)	118, 566, 1147, 1548, 1865
HpyAV	CCTTC	3 cut(s)	484, 1132, 1724
HpyCH4III	ACNGT	4 cut(s)	907, 1065, 1116, 1158
HpyCH4IV	ACGT	1 cut(s)	1382
HpyF10VI	GCNNNNNNNGC	3 cut(s)	53, 59, 269
HpyF3I	CTNAG	7 cut(s)	87, 362, 1068, 1227, 1528, 1703, 1769
HpySE526I	ACGT	1 cut(s)	1382
Hsp92II	CATG	5 cut(s)	443, 767, 1629, 1747, 2008
HspAI	GCGC	3 cut(s)	75, 144, 261
Ksp22I	TGATCA	2 cut(s)	676, 712
KspAI	GTTAAC	1 cut(s)	1548
KspI	CCGCGG	1 cut(s)	423
LguI	GCTCTTC	1 cut(s)	84
LmnI	GCTCC	9 cut(s)	28, 96, 156, 335, 601, 739, 974, 1231, 1462
Lsp1109I	GCAGC	3 cut(s)	454, 1552, 1759
LweI	GCATC	5 cut(s)	295, 352, 721, 824, 1972
MaeI	CTAG	2 cut(s)	50, 1554
MaeII	ACGT	1 cut(s)	1382
MaeIII	GTNAC	3 cut(s)	991, 1772, 1910
MfeI	CAATTG	2 cut(s)	1725, 2040
MflI	RGATCY	4 cut(s)	667, 767, 937, 1664
MhlI	GDGCHC	2 cut(s)	25, 1524
MlyI	GAGTC	5 cut(s)	79, 230, 236, 242, 1571
MmeI	TCCRAC	7 cut(s)	123, 258, 264, 270, 1039, 1467, 1910
MroXI	GAANNNNTTC	1 cut(s)	1455
MseI	TTAA	4 cut(s)	873, 1547, 1763, 1998
MslI	CAYNNNNRTG	3 cut(s)	515, 801, 1630
MspA1I	CMGCKG	1 cut(s)	422
MspI	CCGG	3 cut(s)	258, 430, 454
MspR9I	CCNGG	6 cut(s)	184, 284, 430, 550, 600, 1598
MunI	CAATTG	2 cut(s)	1725, 2040
MvaI	CCWGG	5 cut(s)	184, 284, 550, 600, 1598
MvnI	CGCG	4 cut(s)	75, 263, 422, 1657
MwoI	GCNNNNNNNGC	3 cut(s)	53, 59, 269
NciI	CCSGG	1 cut(s)	430
NcoI	CCATGG	1 cut(s)	763
NlaIII	CATG	5 cut(s)	443, 767, 1629, 1747, 2008
NlaIV	GGNNCC	4 cut(s)	769, 1233, 1491, 1666
NmeAIII	GCCGAG	1 cut(s)	524
NmuCI	GTSAC	1 cut(s)	1910
NspI	RCATGY	1 cut(s)	1629
PaeR7I	CTCGAG	2 cut(s)	155, 2090
PciI	ACATGT	1 cut(s)	1625
PciSI	GCTCTTC	1 cut(s)	84
PdmI	GAANNNNTTC	1 cut(s)	1455
PfeI	GAWTC	4 cut(s)	254, 425, 842, 917
PfoI	TCCNGGA	1 cut(s)	428
PkrI	GCNGC	4 cut(s)	55, 469, 1542, 1749
PleI	GAGTC	5 cut(s)	79, 230, 236, 242, 1570
PpsI	GAGTC	5 cut(s)	79, 230, 236, 242, 1570
PscI	ACATGT	1 cut(s)	1625
PsiI	TTATAA	1 cut(s)	324
Psp124BI	GAGCTC	1 cut(s)	25
Psp6I	CCWGG	5 cut(s)	182, 282, 548, 598, 1596
PspGI	CCWGG	5 cut(s)	182, 282, 548, 598, 1596
PspN4I	GGNNCC	4 cut(s)	769, 1233, 1491, 1666
PspPI	GGNCC	2 cut(s)	1489, 1699
PsuI	RGATCY	4 cut(s)	667, 767, 937, 1664
RsaI	GTAC	3 cut(s)	567, 648, 1214
RsaNI	GTAC	3 cut(s)	566, 647, 1213
RseI	CAYNNNNRTG	3 cut(s)	515, 801, 1630
SacI	GAGCTC	1 cut(s)	25
SacII	CCGCGG	1 cut(s)	423
SapI	GCTCTTC	1 cut(s)	84
SaqAI	TTAA	4 cut(s)	873, 1547, 1763, 1998
SatI	GCNGC	4 cut(s)	54, 468, 1541, 1748
Sau96I	GGNCC	2 cut(s)	1489, 1699
SchI	GAGTC	5 cut(s)	79, 230, 236, 242, 1571
ScrFI	CCNGG	6 cut(s)	184, 284, 430, 550, 600, 1598
SduI	GDGCHC	2 cut(s)	25, 1524
SfaNI	GCATC	5 cut(s)	295, 352, 721, 824, 1972
SfcI	CTRYAG	1 cut(s)	1099
Sfr274I	CTCGAG	2 cut(s)	155, 2090
Sfr303I	CCGCGG	1 cut(s)	423
SgrBI	CCGCGG	1 cut(s)	423
SinI	GGWCC	2 cut(s)	1489, 1699
SlaI	CTCGAG	2 cut(s)	155, 2090
SmiMI	CAYNNNNRTG	3 cut(s)	515, 801, 1630
SmlI	CTYRAG	2 cut(s)	155, 2090
SmoI	CTYRAG	2 cut(s)	155, 2090
SsiI	CCGC	7 cut(s)	54, 73, 180, 420, 422, 684, 1657
SspMI	CTAG	2 cut(s)	50, 1554
SstI	GAGCTC	1 cut(s)	25
StyD4I	CCNGG	6 cut(s)	182, 282, 428, 548, 598, 1596
StyI	CCWWGG	2 cut(s)	123, 763
TaaI	ACNGT	4 cut(s)	907, 1065, 1116, 1158
TaiI	ACGT	1 cut(s)	1385
TaqI	TCGA	7 cut(s)	135, 156, 279, 522, 575, 1875, 2091
TatI	WGTACW	2 cut(s)	565, 646
TauI	GCSGC	1 cut(s)	56
TfiI	GAWTC	4 cut(s)	254, 425, 842, 917
Tru1I	TTAA	4 cut(s)	873, 1547, 1763, 1998
Tru9I	TTAA	4 cut(s)	873, 1547, 1763, 1998
TscAI	CASTG	4 cut(s)	864, 1050, 1156, 1583
TseFI	GTSAC	1 cut(s)	1910
TseI	GCWGC	3 cut(s)	467, 1540, 1747
Tsp45I	GTSAC	1 cut(s)	1910
TspDTI	ATGAA	8 cut(s)	405, 888, 912, 1044, 1212, 1338, 1709, 1728
TspGWI	ACGGA	1 cut(s)	21
TspRI	CASTG	4 cut(s)	864, 1050, 1156, 1583
VpaK11BI	GGWCC	2 cut(s)	1489, 1699
XapI	RAATTY	4 cut(s)	433, 895, 1182, 1201
XceI	RCATGY	1 cut(s)	1629
XhoI	CTCGAG	2 cut(s)	155, 2090
XmnI	GAANNNNTTC	1 cut(s)	1455
XspI	CTAG	2 cut(s)	50, 1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.