Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005782.1

Orthogroup ID

OG0002701

Physical Location & Seq

Genomic Coordinates Forward (+)

31489 .. 34993

Gene Structure 3505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

atgaatatagcttggctcctgcttttgatggttttctttaatgggtttgcctcacatggagctaccaccaacatctctacaagaccagaatttgtaaatgttggggccatgcttgctctcaattccattgttggcaaagttgccaatgtggcaatacaagctgctgttgaagatgtgaattctgacccttctgttctcagtggaaccaagatgagagttgcaacgcagaattcaaactacagtggatttctgggcatagttgaggctttacgattcatggagaaggacacagtggccataattggaccccagaatgctgtaacggctcatgcagtatctcacattgcaaatgagctgcacactcctctgttgtcatttgcagtaacagatcccaccctgtcttcacttcagttcccatattttgttaggactactcagaacgatttgtttcagatggctgcagtagccgatatggttgagtattatggatggagagaggtaattgcaatatatgttgatgatgatttagggagaaatgggattgcagcattaggggatttgcttgctgagaaacgttctaagatctcatacaaagcacctctggttcttgatcctactcggaataacatcactgatgtactgattaaagtgtctttaactgagtctaggattattgttcttcatgtttatccaggttggggccctgaggtgcttagtgtggccaattatcttggcatgatgggaacagggtttgtttggatagctactcattggctttctagttatatagattccaccattcccctccctatgagtactttggataatatgcaaggagttctaacattgcgcatgtacacgccagatacagaacagaaaagaaaatttgtttcgaggtggagcaacttgactggtggtaaccaaattgggttgaatgctttcggtctctatgcttatgactctgtatggttgcttgctcatgcacttgatgccttttttgatcaaggggggaaaatttcattctcaaatgattcaaggttgactcagatgcccagaggggacctaaatcttgaatatctgagtatatttgatggagggagcttgttacttcgtaacatatttggagttaatatgactggcacaactggctcgtttaagtatactccagatagggacctcattcgtcctgcttatgaaatcataaatgtgattggcactggggttaggaggattggttattggtctaaccattctggtttatcagttaagcctccagaaacattttacgcaaccccaccaaatcattctagttcaaaccaaagcctttacagtgtgatttggcctggagagacaacacagcagcctcgtggttgggtttttccaaacaatgggaggcatttgaagattgcagtcccaaaccgtgctagtttccgtgaatttgcatcatatacaccaagcaatgacatgttaactgggtactgcattgatgtttttactgctgcattgaacttgttgccctatgctgttcccttcaaattttttcctgttggcgatggtaaaagaaatccaaggggcactgaccttgtgtacacaatccaaacgggtgaatatgatgcagtagtaggtgatattgcaatcaccaccaacagaaccaggatggcagattttacgcagccatacatcgaatctgggctagtagtagttgcacctgttaagacgacattgaattcaaatccttgggcatttctgaggccattcaataaaatgatgtgggctgtcactgctgccttctttctcattgttggaacagttgtttggatattagagcatagactgaatgatgaatttcggggccctcctagaagacaactcgtcactattctttggtttagcttttcaacttggttctttgcccatagagaaaatacaatcagcaccctgggtcgcctagtactaatcatatggctatttgtggttcttatcatcaactcaagctatactgcaagtttgacctcaatcctaacggtgcaaaagctttcttcctccatcaaaggcattgaaactttgctcgaaagcaaggatcccattggttaccaacagggttcatttgccaagtattatctcattgaggaactccacattgacagttccagactcgtgccactcgtcatgccagaagattatgtgagagccttaaaagctggtccacataaagaaggtggtgttgccgcagtgattgatgagcgtgcatacatggagctattcctttcaagccgatgcgatttcagcattgtaggtcaagaatttaccaaaaccggatggggatttgctttcccaagggactcgcctctatcagtggacctgtcaactgctctgttgaagctgtcggataatggggatctacagaggatccatgacaaatggcttctcagaagtccttgtacttcacaaggagcaaagctagaagtggacaggcttgaacttagaagcttctcggccctttttattatctgtggcggtgcttgtttggttgctctcattatatatttcagcatgatgtgttaccagttcaccaagcggtacactgacagtttgtcttcttccgggagctccacatctcggcgtcttcagacctttctcacatttgttgacgagaaggaagaagtacaaagccgatccaaaaggaggagcatggagaagatgtcaaaccgaagtgcgggtgaagatgactcgtcaaacagttccaaaagaagacatatagatcagtactcatgtgcaagcagaagttttgaagatagtaacaatgcctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

936

Amino Acids

104.4

Weight (kDa)

6.98

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	42 - 331	1.2e-19	Periplasmic binding protein
ANF_receptor	PF01094	49 - 405	3.2e-87	Receptor family ligand binding region
SBP_bac_3	PF00497	483 - 809	2.4e-10	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	485 - 570	3.9e-07	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	589 - 842	2.8e-34	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002701)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191
malus_domestica	MD02G1114100.v1.1 MD15G1229200.v1.1
prunus_persica	Prupe.7G106900_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1
pyrus_communis	pycom02g08900
rosa_chinensis	RchiOBHm_Chr2g0096991
rosa_laevigata	RLG00000016690
rosa_multiflora	Rmu_co8480363.1_g000001 Rmu_sc0005782.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145100
rosa_rugosa	Rorug02G0062600 Rorug02G0062700
rosa_samantha	Rh2AG110500 Rh2BG112300 Rh2CG114400 Rh2DG113600
rosa_wichuraiana	Rw2G008550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	851
AccB7I	CCANNNNNTGG	1 cut(s)	1388
AccI	GTMKAC	1 cut(s)	1160
AciI	CCGC	4 cut(s)	2229, 2517, 2578, 2717
AclI	AACGTT	1 cut(s)	574
AclWI	GGATC	8 cut(s)	383, 605, 2075, 2088, 2404, 2406, 2417, 2670
AcoI	YGGCCR	2 cut(s)	294, 720
AcuI	CTGAAG	2 cut(s)	392, 2612
AcyI	GRCGYC	1 cut(s)	2623
AfiI	CCNNNNNNNGG	5 cut(s)	698, 1388, 2619, 2685, 2716
AflIII	ACRYGT	1 cut(s)	1464
AhdI	GACNNNNNGTC	2 cut(s)	1871, 2593
AjnI	CCWGG	4 cut(s)	691, 1342, 1652, 1938
AjuI	GAANNNNNNNTTGG	2 cut(s)	1798, 1830
Alw21I	GWGCWC	1 cut(s)	2612
Alw26I	GTCTC	2 cut(s)	950, 1343
AlwI	GGATC	8 cut(s)	383, 605, 2075, 2088, 2404, 2406, 2417, 2670
AoxI	GGCC	8 cut(s)	105, 294, 700, 720, 1340, 1751, 1852, 2496
ApaI	GGGCCC	2 cut(s)	704, 1856
ApeKI	GCWGC	8 cut(s)	161, 355, 458, 545, 1360, 1499, 1672, 1784
Asp700I	GAANNNNTTC	1 cut(s)	938
AspLEI	GCGC	1 cut(s)	852
AsuC2I	CCSGG	1 cut(s)	2605
AsuHPI	GGTGA	5 cut(s)	1616, 1630, 1637, 2563, 2732
AvaII	GGWCC	5 cut(s)	305, 1060, 1174, 2204, 2359
AxyI	CCTNAGG	1 cut(s)	705
BaeGI	GKGCMC	3 cut(s)	704, 1577, 1856
BalI	TGGCCA	2 cut(s)	296, 722
BamHI	GGATCC	2 cut(s)	2080, 2409
BanII	GRGCYC	3 cut(s)	704, 1856, 2612
BarI	GAAGNNNNNNTAC	2 cut(s)	2425, 2457
BauI	CACGAG	2 cut(s)	1365, 2156
BbsI	GAAGAC	5 cut(s)	393, 1870, 2589, 2618, 2758
Bbv12I	GWGCWC	1 cut(s)	2612
BbvI	GCAGC	8 cut(s)	148, 342, 445, 557, 1372, 1486, 1684, 1771
BccI	CCATC	9 cut(s)	22, 448, 483, 733, 1085, 1547, 1651, 2054, 2313
BceAI	ACGGC	1 cut(s)	339
BciT130I	CCWGG	4 cut(s)	693, 1344, 1654, 1940
BclI	TGATCA	1 cut(s)	1000
BcnI	CCSGG	1 cut(s)	2605
BcoDI	GTCTC	2 cut(s)	950, 1343
BfaI	CTAG	8 cut(s)	666, 780, 1308, 1425, 1694, 1860, 1949, 2462
BfmI	CTRYAG	3 cut(s)	238, 459, 2402
BglI	GCCNNNNNGGC	1 cut(s)	149
BglII	AGATCT	1 cut(s)	582
BisI	GCNGC	9 cut(s)	162, 356, 459, 546, 1361, 1500, 1673, 1785, 2229
BlsI	GCNGC	9 cut(s)	163, 357, 460, 547, 1362, 1501, 1674, 1786, 2230
BmcAI	AGTACT	3 cut(s)	817, 1953, 2768
Bme1390I	CCNGG	5 cut(s)	693, 1344, 1654, 1940, 2605
Bme18I	GGWCC	5 cut(s)	305, 1060, 1174, 2204, 2359
BmeRI	GACNNNNNGTC	2 cut(s)	1871, 2593
BmrFI	CCNGG	5 cut(s)	693, 1344, 1654, 1940, 2605
BmrI	ACTGGG	2 cut(s)	1227, 1482
BmsI	GCATC	5 cut(s)	979, 1038, 1451, 1603, 2267
BmuI	ACTGGG	2 cut(s)	1227, 1482
BpiI	GAAGAC	5 cut(s)	393, 1870, 2589, 2618, 2758
BpmI	CTGGAG	3 cut(s)	1149, 1257, 1365
BpuEI	CTTGAG	1 cut(s)	1975
BpuMI	CCSGG	1 cut(s)	2605
BsaHI	GRCGYC	1 cut(s)	2623
BsaI	GGTCTC	1 cut(s)	950
BsaJI	CCNNGG	5 cut(s)	1568, 1736, 1938, 1939, 2336
BsaWI	WCCGGW	1 cut(s)	2315
BsaXI	ACNNNNNCTCC	4 cut(s)	1219, 1249, 2687, 2717
Bsc4I	CCNNNNNNNGG	5 cut(s)	698, 1388, 2619, 2685, 2716
Bse1I	ACTGG	6 cut(s)	916, 1141, 1150, 1222, 1477, 2566
Bse21I	CCTNAGG	1 cut(s)	705
Bse3DI	GCAATG	3 cut(s)	342, 845, 1465
BseBI	CCWGG	4 cut(s)	693, 1344, 1654, 1940
BseDI	CCNNGG	5 cut(s)	1568, 1736, 1938, 1939, 2336
BseGI	GGATG	3 cut(s)	494, 1662, 2324
BseLI	CCNNNNNNNGG	5 cut(s)	698, 1388, 2619, 2685, 2716
BseMI	GCAATG	3 cut(s)	342, 845, 1465
BseMII	CTCAG	9 cut(s)	211, 449, 558, 651, 696, 1058, 1070, 1739, 2443
BseNI	ACTGG	6 cut(s)	916, 1141, 1150, 1222, 1477, 2566
BseRI	GAGGAG	2 cut(s)	354, 2701
BseSI	GKGCMC	3 cut(s)	704, 1577, 1856
BseXI	GCAGC	8 cut(s)	148, 342, 445, 557, 1372, 1486, 1684, 1771
BsgI	GTGCAG	1 cut(s)	341
BshFI	GGCC	8 cut(s)	107, 296, 702, 722, 1342, 1753, 1854, 2498
BsiHKAI	GWGCWC	1 cut(s)	2612
BsiSI	CCGG	2 cut(s)	2316, 2604
BslFI	GGGAC	4 cut(s)	1073, 1187, 1397, 2354
BslI	CCNNNNNNNGG	5 cut(s)	698, 1388, 2619, 2685, 2716
BsmAI	GTCTC	2 cut(s)	950, 1343
BsmFI	GGGAC	4 cut(s)	1073, 1187, 1397, 2354
BsmI	GAATGC	2 cut(s)	319, 940
BsnI	GGCC	8 cut(s)	107, 296, 702, 722, 1342, 1753, 1854, 2498
Bso31I	GGTCTC	1 cut(s)	950
Bsp120I	GGGCCC	2 cut(s)	700, 1852
Bsp1286I	GDGCHC	4 cut(s)	704, 1577, 1856, 2612
Bsp1407I	TGTACA	2 cut(s)	855, 1587
Bsp143I	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
BspACI	CCGC	4 cut(s)	2229, 2517, 2578, 2717
BspANI	GGCC	8 cut(s)	107, 296, 702, 722, 1342, 1753, 1854, 2498
BspCNI	CTCAG	9 cut(s)	210, 448, 559, 652, 697, 1057, 1071, 1740, 2442
BspMAI	CTGCAG	1 cut(s)	463
BspPI	GGATC	8 cut(s)	383, 605, 2075, 2088, 2404, 2406, 2417, 2670
BspTNI	GGTCTC	1 cut(s)	950
BsrDI	GCAATG	3 cut(s)	342, 845, 1465
BsrGI	TGTACA	2 cut(s)	855, 1587
BsrI	ACTGG	6 cut(s)	916, 1141, 1150, 1222, 1477, 2566
BssECI	CCNNGG	5 cut(s)	1568, 1736, 1938, 1939, 2336
BssMI	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
BssNAI	GTATAC	1 cut(s)	1161
BssNI	GRCGYC	1 cut(s)	2623
BssSI	CACGAG	2 cut(s)	1365, 2156
BssT1I	CCWWGG	3 cut(s)	1568, 1736, 2336
Bst1107I	GTATAC	1 cut(s)	1161
Bst2BI	CACGAG	2 cut(s)	1365, 2156
Bst2UI	CCWGG	4 cut(s)	693, 1344, 1654, 1940
Bst4CI	ACNGT	9 cut(s)	242, 292, 1331, 1421, 1810, 2026, 2147, 2591, 2741
BstACI	GRCGYC	1 cut(s)	2623
BstAPI	GCANNNNNTGC	1 cut(s)	989
BstAUI	TGTACA	2 cut(s)	855, 1587
BstC8I	GCNNGC	5 cut(s)	114, 564, 975, 2247, 2779
BstEII	GGTNACC	2 cut(s)	917, 2090
BstF5I	GGATG	3 cut(s)	494, 1662, 2324
BstHHI	GCGC	1 cut(s)	852
BstKTI	GATC	9 cut(s)	391, 585, 613, 1003, 2083, 2401, 2412, 2678, 2764
BstMAI	GTCTC	2 cut(s)	950, 1343
BstMBI	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
BstNI	CCWGG	4 cut(s)	693, 1344, 1654, 1940
BstNSI	RCATGY	2 cut(s)	856, 1468
BstPI	GGTNACC	2 cut(s)	917, 2090
BstSCI	CCNGG	5 cut(s)	691, 1342, 1652, 1938, 2603
BstSFI	CTRYAG	3 cut(s)	238, 459, 2402
BstSLI	GKGCMC	3 cut(s)	704, 1577, 1856
BstV1I	GCAGC	8 cut(s)	148, 342, 445, 557, 1372, 1486, 1684, 1771
BstV2I	GAAGAC	5 cut(s)	393, 1870, 2589, 2618, 2758
BstX2I	RGATCY	5 cut(s)	388, 582, 2080, 2398, 2409
BstYI	RGATCY	5 cut(s)	388, 582, 2080, 2398, 2409
BstZ17I	GTATAC	1 cut(s)	1161
Bsu36I	CCTNAGG	1 cut(s)	705
BsuRI	GGCC	8 cut(s)	107, 296, 702, 722, 1342, 1753, 1854, 2498
BtgZI	GCGATG	1 cut(s)	1566
BtsCI	GGATG	3 cut(s)	494, 1662, 2324
BtsI	GCAGTG	2 cut(s)	1779, 2238
Cac8I	GCNNGC	5 cut(s)	114, 564, 975, 2247, 2779
CfoI	GCGC	1 cut(s)	852
CseI	GACGC	1 cut(s)	2612
DpnI	GATC	9 cut(s)	390, 584, 612, 1002, 2082, 2400, 2411, 2677, 2763
DpnII	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
DriI	GACNNNNNGTC	2 cut(s)	1871, 2593
EaeI	YGGCCR	2 cut(s)	294, 720
Eam1105I	GACNNNNNGTC	2 cut(s)	1871, 2593
Ecl136II	GAGCTC	1 cut(s)	2610
Eco130I	CCWWGG	3 cut(s)	1568, 1736, 2336
Eco24I	GRGCYC	3 cut(s)	704, 1856, 2612
Eco31I	GGTCTC	1 cut(s)	950
Eco47I	GGWCC	5 cut(s)	305, 1060, 1174, 2204, 2359
Eco53kI	GAGCTC	1 cut(s)	2610
Eco57I	CTGAAG	2 cut(s)	392, 2612
Eco81I	CCTNAGG	1 cut(s)	705
Eco91I	GGTNACC	2 cut(s)	917, 2090
EcoICRI	GAGCTC	1 cut(s)	2610
EcoO109I	RGGNCCY	6 cut(s)	700, 701, 1060, 1174, 1852, 1853
EcoO65I	GGTNACC	2 cut(s)	917, 2090
EcoRI	GAATTC	3 cut(s)	178, 229, 1726
EcoRII	CCWGG	4 cut(s)	691, 1342, 1652, 1938
EcoT14I	CCWWGG	3 cut(s)	1568, 1736, 2336
EcoT38I	GRGCYC	3 cut(s)	704, 1856, 2612
ErhI	CCWWGG	3 cut(s)	1568, 1736, 2336
FaqI	GGGAC	4 cut(s)	1073, 1187, 1397, 2354
FauI	CCCGC	1 cut(s)	2710
FauNDI	CATATG	1 cut(s)	1961
FbaI	TGATCA	1 cut(s)	1000
FblI	GTMKAC	1 cut(s)	1160
Fnu4HI	GCNGC	9 cut(s)	162, 356, 459, 546, 1361, 1500, 1673, 1785, 2229
FokI	GGATG	3 cut(s)	501, 1669, 2331
FriOI	GRGCYC	3 cut(s)	704, 1856, 2612
Fsp4HI	GCNGC	9 cut(s)	162, 356, 459, 546, 1361, 1500, 1673, 1785, 2229
FspBI	CTAG	8 cut(s)	666, 780, 1308, 1425, 1694, 1860, 1949, 2462
FspI	TGCGCA	1 cut(s)	851
GlaI	GCGC	1 cut(s)	851
GluI	GCNGC	9 cut(s)	162, 356, 459, 546, 1361, 1500, 1673, 1785, 2229
GsuI	CTGGAG	3 cut(s)	1149, 1257, 1365
HaeIII	GGCC	8 cut(s)	107, 296, 702, 722, 1342, 1753, 1854, 2498
HapII	CCGG	2 cut(s)	2316, 2604
HgaI	GACGC	1 cut(s)	2612
HhaI	GCGC	1 cut(s)	852
Hin1I	GRCGYC	1 cut(s)	2623
Hin6I	GCGC	1 cut(s)	850
HinP1I	GCGC	1 cut(s)	850
HincII	GTYRAC	4 cut(s)	1041, 1470, 2367, 2650
HindII	GTYRAC	4 cut(s)	1041, 1470, 2367, 2650
HindIII	AAGCTT	2 cut(s)	2033, 2488
HpaI	GTTAAC	1 cut(s)	1470
HpaII	CCGG	2 cut(s)	2316, 2604
HphI	GGTGA	5 cut(s)	1616, 1630, 1637, 2563, 2732
Hpy188III	TCNNGA	6 cut(s)	608, 1070, 1166, 1274, 2151, 2300
HpyAV	CCTTC	6 cut(s)	198, 277, 1540, 1798, 2210, 2650
HpyCH4III	ACNGT	9 cut(s)	242, 292, 1331, 1421, 1810, 2026, 2147, 2591, 2741
HpyCH4IV	ACGT	1 cut(s)	574
HpySE526I	ACGT	1 cut(s)	574
Hsp92I	GRCGYC	1 cut(s)	2623
HspAI	GCGC	1 cut(s)	850
Ksp22I	TGATCA	1 cut(s)	1000
KspAI	GTTAAC	1 cut(s)	1470
Kzo9I	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
LmnI	GCTCC	9 cut(s)	21, 59, 900, 1098, 2257, 2453, 2607, 2615, 2688
Lsp1109I	GCAGC	8 cut(s)	148, 342, 445, 557, 1372, 1486, 1684, 1771
LweI	GCATC	5 cut(s)	979, 1038, 1451, 1603, 2267
MaeI	CTAG	8 cut(s)	666, 780, 1308, 1425, 1694, 1860, 1949, 2462
MaeII	ACGT	1 cut(s)	574
MalI	GATC	9 cut(s)	390, 584, 612, 1002, 2082, 2400, 2411, 2677, 2763
MboI	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
MflI	RGATCY	5 cut(s)	388, 582, 2080, 2398, 2409
MhlI	GDGCHC	4 cut(s)	704, 1577, 1856, 2612
MlsI	TGGCCA	2 cut(s)	296, 722
MluNI	TGGCCA	2 cut(s)	296, 722
MlyI	GAGTC	6 cut(s)	671, 953, 1036, 2148, 2336, 2723
MmeI	TCCRAC	2 cut(s)	1783, 2367
Mox20I	TGGCCA	2 cut(s)	296, 722
MroXI	GAANNNNTTC	1 cut(s)	938
MscI	TGGCCA	2 cut(s)	296, 722
MseI	TTAA	9 cut(s)	39, 645, 656, 1128, 1155, 1266, 1469, 1713, 2195
MslI	CAYNNNNRTG	1 cut(s)	1205
Msp20I	TGGCCA	2 cut(s)	296, 722
MspI	CCGG	2 cut(s)	2316, 2604
MspR9I	CCNGG	5 cut(s)	693, 1344, 1654, 1940, 2605
Mva1269I	GAATGC	2 cut(s)	319, 940
MvaI	CCWGG	4 cut(s)	693, 1344, 1654, 1940
NciI	CCSGG	1 cut(s)	2605
NdeI	CATATG	1 cut(s)	1961
NdeII	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
NmeAIII	GCCGAG	2 cut(s)	2474, 2599
NmuCI	GTSAC	2 cut(s)	1777, 1873
NsbI	TGCGCA	1 cut(s)	851
NspI	RCATGY	2 cut(s)	856, 1468
PasI	CCCWGGG	1 cut(s)	1939
PciI	ACATGT	1 cut(s)	1464
PcsI	WCGNNNNNNNCGW	1 cut(s)	2163
PctI	GAATGC	2 cut(s)	319, 940
PdmI	GAANNNNTTC	1 cut(s)	938
PfeI	GAWTC	4 cut(s)	273, 791, 1031, 1685
PflMI	CCANNNNNTGG	1 cut(s)	1388
PfoI	TCCNGGA	1 cut(s)	2603
PkrI	GCNGC	9 cut(s)	163, 357, 460, 547, 1362, 1501, 1674, 1786, 2230
PleI	GAGTC	6 cut(s)	670, 953, 1036, 2148, 2336, 2723
PpsI	GAGTC	6 cut(s)	670, 953, 1036, 2148, 2336, 2723
PpuMI	RGGWCCY	2 cut(s)	1060, 1174
PscI	ACATGT	1 cut(s)	1464
Psp124BI	GAGCTC	1 cut(s)	2612
Psp1406I	AACGTT	1 cut(s)	574
Psp5II	RGGWCCY	2 cut(s)	1060, 1174
Psp6I	CCWGG	4 cut(s)	691, 1342, 1652, 1938
PspEI	GGTNACC	2 cut(s)	917, 2090
PspGI	CCWGG	4 cut(s)	691, 1342, 1652, 1938
PspOMI	GGGCCC	2 cut(s)	700, 1852
PspPPI	RGGWCCY	2 cut(s)	1060, 1174
PstI	CTGCAG	1 cut(s)	463
PsuI	RGATCY	5 cut(s)	388, 582, 2080, 2398, 2409
RseI	CAYNNNNRTG	1 cut(s)	1205
SacI	GAGCTC	1 cut(s)	2612
SaqAI	TTAA	9 cut(s)	39, 645, 656, 1128, 1155, 1266, 1469, 1713, 2195
SatI	GCNGC	9 cut(s)	162, 356, 459, 546, 1361, 1500, 1673, 1785, 2229
Sau3AI	GATC	9 cut(s)	388, 582, 610, 1000, 2080, 2398, 2409, 2675, 2761
ScaI	AGTACT	3 cut(s)	817, 1953, 2768
SchI	GAGTC	6 cut(s)	671, 953, 1036, 2148, 2336, 2723
ScrFI	CCNGG	5 cut(s)	693, 1344, 1654, 1940, 2605
SduI	GDGCHC	4 cut(s)	704, 1577, 1856, 2612
SfaNI	GCATC	5 cut(s)	979, 1038, 1451, 1603, 2267
SfcI	CTRYAG	3 cut(s)	238, 459, 2402
SinI	GGWCC	5 cut(s)	305, 1060, 1174, 2204, 2359
SmiMI	CAYNNNNRTG	1 cut(s)	1205
SmlI	CTYRAG	1 cut(s)	1990
SmoI	CTYRAG	1 cut(s)	1990
SsiI	CCGC	4 cut(s)	2229, 2517, 2578, 2717
SspMI	CTAG	8 cut(s)	666, 780, 1308, 1425, 1694, 1860, 1949, 2462
SstI	GAGCTC	1 cut(s)	2612
StyD4I	CCNGG	5 cut(s)	691, 1342, 1652, 1938, 2603
StyI	CCWWGG	3 cut(s)	1568, 1736, 2336
TaaI	ACNGT	9 cut(s)	242, 292, 1331, 1421, 1810, 2026, 2147, 2591, 2741
TaiI	ACGT	1 cut(s)	577
TaqI	TCGA	3 cut(s)	893, 1683, 2070
TaqII	GACCGA	1 cut(s)	932
TatI	WGTACW	8 cut(s)	637, 815, 855, 1587, 1951, 2441, 2665, 2766
TauI	GCSGC	1 cut(s)	2231
TfiI	GAWTC	4 cut(s)	273, 791, 1031, 1685
Tru1I	TTAA	9 cut(s)	39, 645, 656, 1128, 1155, 1266, 1469, 1713, 2195
Tru9I	TTAA	9 cut(s)	39, 645, 656, 1128, 1155, 1266, 1469, 1713, 2195
TseFI	GTSAC	2 cut(s)	1777, 1873
TseI	GCWGC	8 cut(s)	161, 355, 458, 545, 1360, 1499, 1672, 1784
Tsp45I	GTSAC	2 cut(s)	1777, 1873
TspDTI	ATGAA	7 cut(s)	17, 265, 671, 1008, 1209, 1857, 2094
TspGWI	ACGGA	1 cut(s)	1421
Van91I	CCANNNNNTGG	1 cut(s)	1388
VpaK11BI	GGWCC	5 cut(s)	305, 1060, 1174, 2204, 2359
XceI	RCATGY	2 cut(s)	856, 1468
XmiI	GTMKAC	1 cut(s)	1160
XmnI	GAANNNNTTC	1 cut(s)	938
XspI	CTAG	8 cut(s)	666, 780, 1308, 1425, 1694, 1860, 1949, 2462
ZrmI	AGTACT	3 cut(s)	817, 1953, 2768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.