Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006005.1

Orthogroup ID

OG0007974

Physical Location & Seq

Genomic Coordinates Reverse (-)

16479 .. 22689

Gene Structure 6211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006005.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

atggaccatgctgagctcaccactgagcaggttttgaaaagagacataccatgggagcaatacatgaccactaagctcatcactggaacctgccttcagctcttacgccgttatgacaaaagatccgagacttacagatcacagttgcttgatgatgatggcccagcttatgttcaagtgtttgttggcattctacgtgatattttcaaggaagaaacagtagaatacgtccttgctttagttgatgaaatgcttacagccaacccaaaaagagcaaaattgttccatgatacttctcttgtcgataaagatgtctatgagcctttcttaagattgctttggaagggtaattggttcatacaagagaagagctgtaagatacttgctttagtagtgagtgcccggcttaaaccccaaggaactgttgcaaatggagaagcctcaaattcaaagagtaaaatcactaccattgatgatgtgttgaaaggattggtagaatggctttgtgcacagctgaagaagccctcccatcctagtcgtggcatcccaactgccatcaattgccttgcaaccttactaaaggaacctgtggttagatcttcttttgttcaagcagatggggtgaagttacttgttccattaatttctccggcttccacccaacaatctatgcagcttctgtatgaaacatgtctatgtgtctggctcctatcctattatgaacctgcaattgagtacctggctacttctagaacacttccccgactcatagaagttatcaggagttcgacaaaggagaaggttgtcagagttgttgttttgaccctgaggaacttgctttccaaagggacatttggtgctcaaatggtggaccttggactgcctcaaattgttcagagtttgaaagcacaagcatggagtgatgaggatctcctggagggattaaatcaattggaagagggtttgaaggataacatcaagaaattaagttcttttgataaatataagcaagaagtcctccttggccatcttgactggtcacccatgcacaaagatgcaatattctggcgtgacaatattaccaactttgaggagaacgactttcagattctaagagtgctaattactattttggacacaaccagtgatccgagggctttggctgttgcttgctttgatatctcacagttcgtccagcaccatccggctggaagaatcatagtaactgacctcaaggccaaggagcgtgtcatgaaactgatgaatcatgagagtgctgaggttaccaaaaatgccctgctatgcattcagaggcttttcctaggtgccaaccgtgctggatctcaccggaaaaccgcctcaggtgggctcactggtgaactttcgccggggagggagagattgatgtctccatcgaccccgtcgaagctccaccaccacccccgccacatcttcgcttattctcagcagatcagctggagatgctactcctccgaaacagagacagaaatccaattcgtcgccgatgaagctgagtcaaccaaaagcaatctccagtgttcgttgacctcaaccactgagaacgacgagtttgcgctacgacgggcctggtttggcgagttccaattggatttatcctccaactccggagcttcgacggcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000221 GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0007035 GO:0008150 GO:0008324 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0016020 GO:0016462 GO:0016469 GO:0016471 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0032991 GO:0033176 GO:0033178 GO:0033180 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0045851 GO:0046961 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0099131 GO:0099132 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko04142 ko04145 ko04150 ko04721 ko05110 ko05120 ko05152 ko05323 map00190 map01100 map04142 map04145 map04150 map04721 map05110 map05120 map05152 map05323

Pfam Domains

Protein Families

V-ATPase_H_C V-ATPase_H_N

Protein Analysis

554

Amino Acids

62.61

Weight (kDa)

6.53

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42050
fragaria_vesca	FvH4_5g39390 FvH4_7g34170 FvH4_7g34170 FvH4_7g34170 FvH4_7g34170
malus_domestica	MD01G1238500.v1.1 MD07G1310400.v1.1
prunus_persica	Prupe.2G328400_v2.0.a1 Prupe.2G328400_v2.0.a1
pyrus_communis	pycom01g24610 pycom07g28260
rosa_chinensis	RchiOBHm_Chr1g0384521
rosa_laevigata	RLG00000026035
rosa_multiflora	Rmu_co8438647.1_g000001 Rmu_sc0006005.1_g000006
rosa_roxburghii	Rroxscaffold_4G00276630
rosa_rugosa	Rorug01G0448500 Rorug01G0448600
rosa_samantha	Rh1AG473700 Rh1BG431800 Rh1CG444900 Rh1DG464300
rosa_wichuraiana	Rw1G039890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	19, 98, 733
AccB1I	GGYRCC	1 cut(s)	1325
AccIII	TCCGGA	1 cut(s)	1646
AciI	CCGC	2 cut(s)	1356, 1444
AclWI	GGATC	4 cut(s)	117, 936, 1142, 1348
AcoI	YGGCCR	1 cut(s)	1024
AcsI	RAATTY	1 cut(s)	445
AcuI	CTGAAG	2 cut(s)	80, 536
AfaI	GTAC	1 cut(s)	737
AfiI	CCNNNNNNNGG	2 cut(s)	539, 1365
AflII	CTTAAG	1 cut(s)	328
AflIII	ACRYGT	1 cut(s)	689
AgsI	TTSAA	8 cut(s)	37, 176, 208, 450, 484, 611, 904, 967
AjnI	CCWGG	3 cut(s)	738, 933, 1607
AjuI	GAANNNNNNNTTGG	2 cut(s)	1005, 1037
AloI	GAACNNNNNNTCC	2 cut(s)	824, 856
Alw21I	GWGCWC	3 cut(s)	18, 511, 862
Alw26I	GTCTC	4 cut(s)	36, 122, 1413, 1496
Alw44I	GTGCAC	1 cut(s)	507
AlwI	GGATC	4 cut(s)	117, 936, 1142, 1348
AlwNI	CAGNNNCTG	1 cut(s)	679
Aor13HI	TCCGGA	1 cut(s)	1646
AoxI	GGCC	4 cut(s)	160, 1024, 1236, 1605
ApaLI	GTGCAC	1 cut(s)	507
ApeKI	GCWGC	1 cut(s)	673
ApoI	RAATTY	1 cut(s)	445
AseI	ATTAAT	1 cut(s)	641
AspA2I	CCTAGG	1 cut(s)	1321
AspLEI	GCGC	1 cut(s)	1597
AspS9I	GGNCC	4 cut(s)	4, 161, 871, 1605
AsuC2I	CCSGG	2 cut(s)	403, 1389
AsuHPI	GGTGA	5 cut(s)	10, 634, 1032, 1337, 1388
AvaII	GGWCC	2 cut(s)	4, 871
AvrII	CCTAGG	1 cut(s)	1321
AxyI	CCTNAGG	2 cut(s)	827, 1360
BaeGI	GKGCMC	2 cut(s)	403, 511
BalI	TGGCCA	1 cut(s)	1026
BanI	GGYRCC	1 cut(s)	1325
BanII	GRGCYC	2 cut(s)	18, 1371
Bbv12I	GWGCWC	3 cut(s)	18, 511, 862
BbvCI	CCTCAGC	1 cut(s)	1278
BbvI	GCAGC	1 cut(s)	685
BccI	CCATC	7 cut(s)	152, 537, 563, 611, 1035, 1209, 1420
BceAI	ACGGC	1 cut(s)	93
BcgI	CGANNNNNNTGC	2 cut(s)	1574, 1608
BciT130I	CCWGG	3 cut(s)	740, 935, 1609
BcnI	CCSGG	2 cut(s)	403, 1389
BcoDI	GTCTC	4 cut(s)	36, 122, 1413, 1496
BfaI	CTAG	3 cut(s)	534, 750, 1322
BfrI	CTTAAG	1 cut(s)	328
BfuAI	ACCTGC	3 cut(s)	19, 98, 733
BglII	AGATCT	1 cut(s)	596
BisI	GCNGC	1 cut(s)	674
BlnI	CCTAGG	1 cut(s)	1321
BlpI	GCTNAGC	1 cut(s)	12
BlsI	GCNGC	1 cut(s)	675
Bme1390I	CCNGG	5 cut(s)	403, 740, 935, 1389, 1609
Bme18I	GGWCC	2 cut(s)	4, 871
BmgT120I	GGNCC	4 cut(s)	4, 161, 871, 1605
BmiI	GGNNCC	4 cut(s)	88, 585, 707, 1327
BmrFI	CCNGG	5 cut(s)	403, 740, 935, 1389, 1609
BmsI	GCATC	3 cut(s)	552, 1045, 1472
BpmI	CTGGAG	3 cut(s)	956, 1498, 1538
Bpu10I	CCTNAGC	1 cut(s)	1278
Bpu1102I	GCTNAGC	1 cut(s)	12
BpuEI	CTTGAG	1 cut(s)	1217
BpuMI	CCSGG	2 cut(s)	403, 1389
BsaAI	YACGTR	1 cut(s)	197
BsaBI	GATNNNNATC	1 cut(s)	927
BsaJI	CCNNGG	8 cut(s)	50, 415, 874, 1021, 1151, 1239, 1321, 1388
BsaWI	WCCGGW	2 cut(s)	1347, 1646
Bsc4I	CCNNNNNNNGG	2 cut(s)	539, 1365
Bse1I	ACTGG	5 cut(s)	88, 1040, 1143, 1378, 1555
Bse21I	CCTNAGG	2 cut(s)	827, 1360
Bse8I	GATNNNNATC	1 cut(s)	927
BseAI	TCCGGA	1 cut(s)	1646
BseBI	CCWGG	3 cut(s)	740, 935, 1609
BseDI	CCNNGG	8 cut(s)	50, 415, 874, 1021, 1151, 1239, 1321, 1388
BseGI	GGATG	3 cut(s)	529, 543, 1201
BseJI	GATNNNNATC	1 cut(s)	927
BseLI	CCNNNNNNNGG	2 cut(s)	539, 1365
BseMII	CTCAG	7 cut(s)	15, 818, 1269, 1374, 1478, 1524, 1569
BseNI	ACTGG	5 cut(s)	88, 1040, 1143, 1378, 1555
BseRI	GAGGAG	2 cut(s)	1106, 1480
BseSI	GKGCMC	2 cut(s)	403, 511
BseXI	GCAGC	1 cut(s)	685
BseYI	CCCAGC	1 cut(s)	163
BshFI	GGCC	4 cut(s)	162, 1026, 1238, 1607
BshNI	GGYRCC	1 cut(s)	1325
BsiHKAI	GWGCWC	3 cut(s)	18, 511, 862
BsiSI	CCGG	6 cut(s)	403, 650, 1205, 1348, 1388, 1647
BslFI	GGGAC	1 cut(s)	862
BslI	CCNNNNNNNGG	2 cut(s)	539, 1365
BsmAI	GTCTC	4 cut(s)	36, 122, 1413, 1496
BsmFI	GGGAC	1 cut(s)	862
BsmI	GAATGC	2 cut(s)	189, 1305
BsnI	GGCC	4 cut(s)	162, 1026, 1238, 1607
Bsp1286I	GDGCHC	5 cut(s)	18, 403, 511, 862, 1371
Bsp13I	TCCGGA	1 cut(s)	1646
Bsp143I	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
Bsp1720I	GCTNAGC	1 cut(s)	12
Bsp19I	CCATGG	1 cut(s)	50
BspACI	CCGC	2 cut(s)	1356, 1444
BspANI	GGCC	4 cut(s)	162, 1026, 1238, 1607
BspCNI	CTCAG	8 cut(s)	4, 16, 819, 1270, 1373, 1477, 1525, 1570
BspEI	TCCGGA	1 cut(s)	1646
BspHI	TCATGA	2 cut(s)	1251, 1267
BspLI	GGNNCC	4 cut(s)	88, 585, 707, 1327
BspMI	ACCTGC	3 cut(s)	19, 98, 733
BspPI	GGATC	4 cut(s)	117, 936, 1142, 1348
BspQI	GCTCTTC	1 cut(s)	362
BspT107I	GGYRCC	1 cut(s)	1325
BspTI	CTTAAG	1 cut(s)	328
BsrI	ACTGG	5 cut(s)	88, 1040, 1143, 1378, 1555
BssECI	CCNNGG	8 cut(s)	50, 415, 874, 1021, 1151, 1239, 1321, 1388
BssMI	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
BssT1I	CCWWGG	6 cut(s)	50, 415, 874, 1021, 1239, 1321
Bst2UI	CCWGG	3 cut(s)	740, 935, 1609
Bst4CI	ACNGT	5 cut(s)	144, 220, 424, 1188, 1334
Bst6I	CTCTTC	2 cut(s)	362, 951
BstAFI	CTTAAG	1 cut(s)	328
BstBAI	YACGTR	1 cut(s)	197
BstC8I	GCNNGC	1 cut(s)	1171
BstDSI	CCRYGG	1 cut(s)	50
BstEII	GGTNACC	2 cut(s)	1038, 1282
BstF5I	GGATG	3 cut(s)	529, 543, 1201
BstHHI	GCGC	1 cut(s)	1597
BstKTI	GATC	7 cut(s)	125, 140, 599, 931, 1150, 1343, 1473
BstMAI	GTCTC	4 cut(s)	36, 122, 1413, 1496
BstMBI	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
BstMWI	GCNNNNNNNGC	5 cut(s)	520, 1334, 1482, 1529, 1658
BstNI	CCWGG	3 cut(s)	740, 935, 1609
BstNSI	RCATGY	1 cut(s)	693
BstPI	GGTNACC	2 cut(s)	1038, 1282
BstSCI	CCNGG	5 cut(s)	401, 738, 933, 1387, 1607
BstSLI	GKGCMC	2 cut(s)	403, 511
BstV1I	GCAGC	1 cut(s)	685
BstX2I	RGATCY	4 cut(s)	122, 596, 928, 1340
BstXI	CCANNNNNNTGG	1 cut(s)	1208
BstYI	RGATCY	4 cut(s)	122, 596, 928, 1340
Bsu36I	CCTNAGG	2 cut(s)	827, 1360
BsuRI	GGCC	4 cut(s)	162, 1026, 1238, 1607
BtgI	CCRYGG	1 cut(s)	50
BtsCI	GGATG	3 cut(s)	529, 543, 1201
BtsIMutI	CAGTG	6 cut(s)	21, 81, 1150, 1371, 1562, 1575
BveI	ACCTGC	3 cut(s)	19, 98, 733
Cac8I	GCNNGC	1 cut(s)	1171
CaiI	CAGNNNCTG	1 cut(s)	679
CciI	TCATGA	2 cut(s)	1251, 1267
CfoI	GCGC	1 cut(s)	1597
Cfr13I	GGNCC	4 cut(s)	4, 161, 871, 1605
Csp6I	GTAC	1 cut(s)	736
CviAII	CATG	9 cut(s)	8, 51, 64, 287, 690, 915, 1045, 1252, 1268
CviQI	GTAC	1 cut(s)	736
DpnI	GATC	7 cut(s)	124, 139, 598, 930, 1149, 1342, 1472
DpnII	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
EaeI	YGGCCR	1 cut(s)	1024
Eam1104I	CTCTTC	2 cut(s)	362, 951
EarI	CTCTTC	2 cut(s)	362, 951
Ecl136II	GAGCTC	1 cut(s)	16
Eco130I	CCWWGG	6 cut(s)	50, 415, 874, 1021, 1239, 1321
Eco24I	GRGCYC	2 cut(s)	18, 1371
Eco32I	GATATC	1 cut(s)	1180
Eco47I	GGWCC	2 cut(s)	4, 871
Eco53kI	GAGCTC	1 cut(s)	16
Eco57I	CTGAAG	2 cut(s)	80, 536
Eco81I	CCTNAGG	2 cut(s)	827, 1360
Eco91I	GGTNACC	2 cut(s)	1038, 1282
EcoICRI	GAGCTC	1 cut(s)	16
EcoO65I	GGTNACC	2 cut(s)	1038, 1282
EcoRII	CCWGG	3 cut(s)	738, 933, 1607
EcoRV	GATATC	1 cut(s)	1180
EcoT14I	CCWWGG	6 cut(s)	50, 415, 874, 1021, 1239, 1321
EcoT22I	ATGCAT	1 cut(s)	1307
EcoT38I	GRGCYC	2 cut(s)	18, 1371
ErhI	CCWWGG	6 cut(s)	50, 415, 874, 1021, 1239, 1321
FaeI	CATG	9 cut(s)	11, 54, 67, 290, 693, 918, 1048, 1255, 1271
FalI	AAGNNNNNCTT	2 cut(s)	1005, 1037
FaqI	GGGAC	1 cut(s)	862
FatI	CATG	9 cut(s)	7, 50, 63, 286, 689, 914, 1044, 1251, 1267
FauI	CCCGC	1 cut(s)	1451
Fnu4HI	GCNGC	1 cut(s)	674
FokI	GGATG	3 cut(s)	516, 530, 1188
FriOI	GRGCYC	2 cut(s)	18, 1371
Fsp4HI	GCNGC	1 cut(s)	674
FspBI	CTAG	3 cut(s)	534, 750, 1322
GlaI	GCGC	1 cut(s)	1596
GluI	GCNGC	1 cut(s)	674
GsaI	CCCAGC	1 cut(s)	167
GsuI	CTGGAG	3 cut(s)	956, 1498, 1538
HaeIII	GGCC	4 cut(s)	162, 1026, 1238, 1607
HapII	CCGG	6 cut(s)	403, 650, 1205, 1348, 1388, 1647
HhaI	GCGC	1 cut(s)	1597
Hin1II	CATG	9 cut(s)	11, 54, 67, 290, 693, 918, 1048, 1255, 1271
Hin6I	GCGC	1 cut(s)	1595
HinP1I	GCGC	1 cut(s)	1595
HincII	GTYRAC	2 cut(s)	1539, 1566
HindII	GTYRAC	2 cut(s)	1539, 1566
HinfI	GANTC	5 cut(s)	765, 1108, 1215, 1264, 1535
HpaII	CCGG	6 cut(s)	403, 650, 1205, 1348, 1388, 1647
HphI	GGTGA	5 cut(s)	10, 634, 1032, 1337, 1388
Hpy166II	GTNNAC	5 cut(s)	509, 871, 1379, 1539, 1566
Hpy188I	TCNGA	7 cut(s)	127, 809, 897, 1107, 1152, 1311, 1495
Hpy188III	TCNNGA	7 cut(s)	750, 781, 979, 1031, 1252, 1268, 1647
Hpy8I	GTNNAC	5 cut(s)	509, 871, 1379, 1539, 1566
Hpy99I	CGWCG	5 cut(s)	1426, 1523, 1589, 1605, 1660
HpyAV	CCTTC	4 cut(s)	104, 337, 793, 961
HpyCH4III	ACNGT	5 cut(s)	144, 220, 424, 1188, 1334
HpyCH4IV	ACGT	2 cut(s)	196, 228
HpyCH4V	TGCA	8 cut(s)	428, 509, 569, 673, 728, 1048, 1058, 1305
HpyF10VI	GCNNNNNNNGC	5 cut(s)	520, 1334, 1482, 1529, 1658
HpySE526I	ACGT	2 cut(s)	196, 228
Hsp92II	CATG	9 cut(s)	11, 54, 67, 290, 693, 918, 1048, 1255, 1271
HspAI	GCGC	1 cut(s)	1595
Kpn2I	TCCGGA	1 cut(s)	1646
Kzo9I	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
LguI	GCTCTTC	1 cut(s)	362
LmnI	GCTCC	5 cut(s)	55, 711, 1243, 1434, 1649
Lsp1109I	GCAGC	1 cut(s)	685
LweI	GCATC	3 cut(s)	552, 1045, 1472
MaeI	CTAG	3 cut(s)	534, 750, 1322
MaeII	ACGT	2 cut(s)	196, 228
MaeIII	GTNAC	5 cut(s)	627, 1038, 1070, 1222, 1282
MalI	GATC	7 cut(s)	124, 139, 598, 930, 1149, 1342, 1472
MboI	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
MboII	GAAGA	7 cut(s)	224, 379, 529, 591, 968, 1224, 1444
MfeI	CAATTG	4 cut(s)	559, 729, 950, 1625
MflI	RGATCY	4 cut(s)	122, 596, 928, 1340
MhlI	GDGCHC	5 cut(s)	18, 403, 511, 862, 1371
MlsI	TGGCCA	1 cut(s)	1026
MluNI	TGGCCA	1 cut(s)	1026
MlyI	GAGTC	2 cut(s)	759, 1544
MmeI	TCCRAC	1 cut(s)	1665
Mox20I	TGGCCA	1 cut(s)	1026
Mph1103I	ATGCAT	1 cut(s)	1307
MroI	TCCGGA	1 cut(s)	1646
MscI	TGGCCA	1 cut(s)	1026
MseI	TTAA	5 cut(s)	329, 408, 641, 944, 986
MslI	CAYNNNNRTG	4 cut(s)	694, 913, 1053, 1272
Msp20I	TGGCCA	1 cut(s)	1026
MspA1I	CMGCKG	2 cut(s)	514, 1476
MspCI	CTTAAG	1 cut(s)	328
MspI	CCGG	6 cut(s)	403, 650, 1205, 1348, 1388, 1647
MspR9I	CCNGG	5 cut(s)	403, 740, 935, 1389, 1609
MunI	CAATTG	4 cut(s)	559, 729, 950, 1625
Mva1269I	GAATGC	2 cut(s)	189, 1305
MvaI	CCWGG	3 cut(s)	740, 935, 1609
MwoI	GCNNNNNNNGC	5 cut(s)	520, 1334, 1482, 1529, 1658
NciI	CCSGG	2 cut(s)	403, 1389
NcoI	CCATGG	1 cut(s)	50
NdeII	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
NlaIII	CATG	9 cut(s)	11, 54, 67, 290, 693, 918, 1048, 1255, 1271
NlaIV	GGNNCC	4 cut(s)	88, 585, 707, 1327
NmuCI	GTSAC	2 cut(s)	1038, 1070
NsiI	ATGCAT	1 cut(s)	1307
NspI	RCATGY	1 cut(s)	693
PagI	TCATGA	2 cut(s)	1251, 1267
PciI	ACATGT	1 cut(s)	689
PciSI	GCTCTTC	1 cut(s)	362
PcsI	WCGNNNNNNNCGW	1 cut(s)	1421
PctI	GAATGC	2 cut(s)	189, 1305
PfeI	GAWTC	3 cut(s)	1108, 1215, 1264
PflFI	GACNNNGTC	1 cut(s)	1420
PfoI	TCCNGGA	1 cut(s)	933
PkrI	GCNGC	1 cut(s)	675
PleI	GAGTC	2 cut(s)	759, 1543
PpsI	GAGTC	2 cut(s)	759, 1543
Ppu21I	YACGTR	1 cut(s)	197
PscI	ACATGT	1 cut(s)	689
PshBI	ATTAAT	1 cut(s)	641
Psp124BI	GAGCTC	1 cut(s)	18
Psp6I	CCWGG	3 cut(s)	738, 933, 1607
PspEI	GGTNACC	2 cut(s)	1038, 1282
PspFI	CCCAGC	1 cut(s)	163
PspGI	CCWGG	3 cut(s)	738, 933, 1607
PspN4I	GGNNCC	4 cut(s)	88, 585, 707, 1327
PspPI	GGNCC	4 cut(s)	4, 161, 871, 1605
PstNI	CAGNNNCTG	1 cut(s)	679
PsuI	RGATCY	4 cut(s)	122, 596, 928, 1340
PsyI	GACNNNGTC	1 cut(s)	1420
PvuII	CAGCTG	2 cut(s)	514, 1476
RsaI	GTAC	1 cut(s)	737
RsaNI	GTAC	1 cut(s)	736
RseI	CAYNNNNRTG	4 cut(s)	694, 913, 1053, 1272
SacI	GAGCTC	1 cut(s)	18
SapI	GCTCTTC	1 cut(s)	362
SaqAI	TTAA	5 cut(s)	329, 408, 641, 944, 986
SatI	GCNGC	1 cut(s)	674
Sau3AI	GATC	7 cut(s)	122, 137, 596, 928, 1147, 1340, 1470
Sau96I	GGNCC	4 cut(s)	4, 161, 871, 1605
SchI	GAGTC	2 cut(s)	759, 1544
ScrFI	CCNGG	5 cut(s)	403, 740, 935, 1389, 1609
SduI	GDGCHC	5 cut(s)	18, 403, 511, 862, 1371
SfaNI	GCATC	3 cut(s)	552, 1045, 1472
SinI	GGWCC	2 cut(s)	4, 871
SmiMI	CAYNNNNRTG	4 cut(s)	694, 913, 1053, 1272
SmlI	CTYRAG	2 cut(s)	328, 1232
SmoI	CTYRAG	2 cut(s)	328, 1232
SsiI	CCGC	2 cut(s)	1356, 1444
SspI	AATATT	2 cut(s)	1062, 1078
SspMI	CTAG	3 cut(s)	534, 750, 1322
SstI	GAGCTC	1 cut(s)	18
StyD4I	CCNGG	5 cut(s)	401, 738, 933, 1387, 1607
StyI	CCWWGG	6 cut(s)	50, 415, 874, 1021, 1239, 1321
TaaI	ACNGT	5 cut(s)	144, 220, 424, 1188, 1334
TaiI	ACGT	2 cut(s)	199, 231
TaqI	TCGA	5 cut(s)	303, 788, 1415, 1424, 1655
TfiI	GAWTC	3 cut(s)	1108, 1215, 1264
Tru1I	TTAA	5 cut(s)	329, 408, 641, 944, 986
Tru9I	TTAA	5 cut(s)	329, 408, 641, 944, 986
TscAI	CASTG	6 cut(s)	28, 88, 1150, 1378, 1562, 1582
TseFI	GTSAC	2 cut(s)	1038, 1070
TseI	GCWGC	1 cut(s)	673
Tsp45I	GTSAC	2 cut(s)	1038, 1070
TspDTI	ATGAA	7 cut(s)	261, 346, 699, 735, 1268, 1277, 1542
TspRI	CASTG	6 cut(s)	28, 88, 1150, 1378, 1562, 1582
Tth111I	GACNNNGTC	1 cut(s)	1420
Vha464I	CTTAAG	1 cut(s)	328
VneI	GTGCAC	1 cut(s)	507
VpaK11BI	GGWCC	2 cut(s)	4, 871
VspI	ATTAAT	1 cut(s)	641
XapI	RAATTY	1 cut(s)	445
XbaI	TCTAGA	1 cut(s)	749
XceI	RCATGY	1 cut(s)	693
XcmI	CCANNNNNNNNNTGG	1 cut(s)	536
XmaJI	CCTAGG	1 cut(s)	1321
XspI	CTAG	3 cut(s)	534, 750, 1322
Zsp2I	ATGCAT	1 cut(s)	1307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.