Rmu_sc0006415.1_g000003

Phosphate-induced protein 1 conserved region

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006415.1
Physical Location & Seq
Reverse (-)
19107 .. 22374
3268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006415.1_g000003.1.cds

Sequence Viewer

Length: 1239 bp
atggctaccatgagcaccgttcaatggctagaagaagtcaccatggaagaaatgatcaacatgctcatgaaggtaatcaccaaagttggcaaatacatgaccaaaggagtcatgacgttgagggttggacaacatggcgccacttttggccatggtaacactattccaacaccaatggtcctagcgaccatttatgttgcgtcaatatgcctcaatcaaaagatcatcctctacattatgttttatggagtacttgatcaatggaatacaattctgccagttttctatgatgtggatccgtctgatgttagaaagcaaagtggaagctttacagaagcctttgccaagcatgaagagaactttattcaagaaaacgaaaaaaagaaaatggagaggtggagagaagctttaacgatggtggaaaatctttctgggtggcattcaaagaattctggaggttgccggaattcgatttggagcagatcgggtgtagtgctgcaggtggtctgggtagcgaggccggtctgggctgtaggcggaggcgaaggtgagcagcagcgtgctgggattgcttccttaggcagtgaggccggtctgggctgtagtccggcaaactgggaatgcacaaaggaagaagaagaagagaggaagagagagcttggtttcggtggtcggaaactctccactctagcggagcagcagccactagtgctcaagttcgataacagcgcccttctcaagggcaacatcaccgtcaatctattatggtatggtcactttaccccaatccagcgctccataattgtagacttcatccagtccctcagttcccagcgtcgtgccccactccttccctcaacttcttcctggtggaaaaccactgagaaatacaagattggatcttccaccgtcccctccaccaatccctacgacatcctctgcggcgtcccctacattgccttccacaccgaacctagaagaccagaaaagctgtcgtggacgctgcaagaaaaagcccagaaacggtcagagaatttcggcgtcgattctcgcaccatggtcgacgaaagaccaaaacgattccagacggacgtctgcaacgtcgagatggctcgaacactaaaccatccccaaccccacaggtcgacgttcatcgtcttctccccagatctgatcatcttctctctaagcctcgatttcgagttcgaatcgaagctccaaacagctactccaccatag

Protein Analysis

412

Amino Acids

46.68

Weight (kDa)

8.12

Isoelectric Point (pI)

55.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 490
AatII GACGTC 1 cut(s) 1095
Acc36I ACCTGC 1 cut(s) 490
AccB1I GGYRCC 1 cut(s) 137
AccI GTMKAC 3 cut(s) 807, 1062, 1145
AciI CCGC 3 cut(s) 537, 692, 942
AclWI GGATC 3 cut(s) 290, 303, 907
AcoI YGGCCR 1 cut(s) 148
AcsI RAATTY 3 cut(s) 448, 466, 1033
AcyI GRCGYC 4 cut(s) 138, 945, 1041, 1092
AfaI GTAC 1 cut(s) 252
AfeI AGCGCT 1 cut(s) 794
AfiI CCNNNNNNNGG 3 cut(s) 24, 739, 1023
AgsI TTSAA 3 cut(s) 23, 368, 444
AhlI ACTAGT 1 cut(s) 706
AjnI CCWGG 1 cut(s) 866
AluBI AGCT 6 cut(s) 327, 407, 658, 991, 1216, 1226
AluI AGCT 6 cut(s) 327, 407, 658, 991, 1216, 1226
Alw21I GWGCWC 2 cut(s) 17, 714
AlwI GGATC 3 cut(s) 290, 303, 907
Aor51HI AGCGCT 1 cut(s) 794
AoxI GGCC 3 cut(s) 148, 518, 588
ApeKI GCWGC 6 cut(s) 496, 553, 556, 697, 700, 1003
ApoI RAATTY 3 cut(s) 448, 466, 1033
AspLEI GCGC 3 cut(s) 140, 731, 795
AspS9I GGNCC 1 cut(s) 178
AsuHPI GGTGA 4 cut(s) 31, 70, 560, 742
AsuII TTCGAA 1 cut(s) 1206
AvaII GGWCC 1 cut(s) 178
AxyI CCTNAGG 1 cut(s) 577
BaeGI GKGCMC 1 cut(s) 844
BalI TGGCCA 1 cut(s) 150
BamHI GGATCC 1 cut(s) 295
BanI GGYRCC 1 cut(s) 137
BbsI GAAGAC 2 cut(s) 985, 1150
Bbv12I GWGCWC 2 cut(s) 17, 714
BbvI GCAGC 6 cut(s) 483, 565, 568, 709, 712, 990
BccI CCATC 3 cut(s) 409, 1102, 1134
BcgI CGANNNNNNTGC 2 cut(s) 1042, 1076
BciT130I CCWGG 1 cut(s) 868
BclI TGATCA 3 cut(s) 54, 256, 1173
BcuI ACTAGT 1 cut(s) 706
BfaI CTAG 5 cut(s) 29, 182, 689, 707, 975
BfmI CTRYAG 3 cut(s) 497, 531, 601
BfoI RGCGCY 3 cut(s) 141, 732, 796
BfuAI ACCTGC 1 cut(s) 490
BglII AGATCT 1 cut(s) 1168
BisI GCNGC 7 cut(s) 497, 554, 557, 698, 701, 943, 1004
BlsI GCNGC 7 cut(s) 498, 555, 558, 699, 702, 944, 1005
BmcAI AGTACT 1 cut(s) 252
Bme1390I CCNGG 1 cut(s) 868
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 1 cut(s) 178
BmiI GGNNCC 2 cut(s) 139, 297
BmrFI CCNGG 1 cut(s) 868
BmrI ACTGGG 1 cut(s) 625
BmuI ACTGGG 1 cut(s) 625
BoxI GACNNNNGTC 1 cut(s) 1091
BpiI GAAGAC 2 cut(s) 985, 1150
BpmI CTGGAG 1 cut(s) 474
Bpu14I TTCGAA 1 cut(s) 1206
BpuEI CTTGAG 2 cut(s) 698, 722
BsaBI GATNNNNATC 1 cut(s) 294
BsaHI GRCGYC 4 cut(s) 138, 945, 1041, 1092
BsaJI CCNNGG 3 cut(s) 42, 151, 1056
BsaXI ACNNNNNCTCC 1 cut(s) 1213
Bsc4I CCNNNNNNNGG 3 cut(s) 24, 739, 1023
Bse118I RCCGGY 2 cut(s) 520, 590
Bse1I ACTGG 3 cut(s) 278, 620, 817
Bse21I CCTNAGG 1 cut(s) 577
Bse3DI GCAATG 1 cut(s) 954
Bse8I GATNNNNATC 1 cut(s) 294
BseBI CCWGG 1 cut(s) 868
BseDI CCNNGG 3 cut(s) 42, 151, 1056
BseGI GGATG 4 cut(s) 225, 813, 933, 1126
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 3 cut(s) 24, 739, 1023
BseMI GCAATG 1 cut(s) 954
BseMII CTCAG 2 cut(s) 838, 873
BseNI ACTGG 3 cut(s) 278, 620, 817
BseSI GKGCMC 1 cut(s) 844
BseXI GCAGC 6 cut(s) 483, 565, 568, 709, 712, 990
BseYI CCCAGC 2 cut(s) 563, 831
BshFI GGCC 3 cut(s) 150, 520, 590
BshNI GGYRCC 1 cut(s) 137
BsiHKAI GWGCWC 2 cut(s) 17, 714
BsiSI CCGG 4 cut(s) 463, 521, 591, 608
BslFI GGGAC 3 cut(s) 805, 896, 932
BslI CCNNNNNNNGG 3 cut(s) 24, 739, 1023
BsmFI GGGAC 3 cut(s) 805, 896, 932
BsmI GAATGC 2 cut(s) 439, 626
BsnI GGCC 3 cut(s) 150, 520, 590
Bsp119I TTCGAA 1 cut(s) 1206
Bsp1286I GDGCHC 3 cut(s) 17, 714, 844
Bsp143I GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
Bsp19I CCATGG 3 cut(s) 42, 151, 1056
BspACI CCGC 3 cut(s) 537, 692, 942
BspANI GGCC 3 cut(s) 150, 520, 590
BspCNI CTCAG 2 cut(s) 837, 874
BspHI TCATGA 2 cut(s) 66, 111
BspLI GGNNCC 2 cut(s) 139, 297
BspMAI CTGCAG 1 cut(s) 501
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 3 cut(s) 290, 303, 907
BspT104I TTCGAA 1 cut(s) 1206
BspT107I GGYRCC 1 cut(s) 137
BsrDI GCAATG 1 cut(s) 954
BsrFI RCCGGY 2 cut(s) 520, 590
BsrI ACTGG 3 cut(s) 278, 620, 817
BssAI RCCGGY 2 cut(s) 520, 590
BssECI CCNNGG 3 cut(s) 42, 151, 1056
BssMI GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
BssNI GRCGYC 4 cut(s) 138, 945, 1041, 1092
BssT1I CCWWGG 3 cut(s) 42, 151, 1056
Bst2UI CCWGG 1 cut(s) 868
Bst4CI ACNGT 4 cut(s) 19, 754, 910, 1026
Bst6I CTCTTC 3 cut(s) 348, 636, 644
BstACI GRCGYC 4 cut(s) 138, 945, 1041, 1092
BstBI TTCGAA 1 cut(s) 1206
BstC8I GCNNGC 1 cut(s) 561
BstDEI CTNAG 4 cut(s) 577, 824, 882, 1187
BstDSI CCRYGG 3 cut(s) 42, 151, 1056
BstENI CCTNNNNNAGG 1 cut(s) 737
BstF5I GGATG 4 cut(s) 225, 813, 933, 1126
BstH2I RGCGCY 3 cut(s) 141, 732, 796
BstHHI GCGC 3 cut(s) 140, 731, 795
BstKTI GATC 8 cut(s) 57, 225, 259, 298, 485, 902, 1171, 1176
BstMBI GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
BstMWI GCNNNNNNNGC 2 cut(s) 569, 709
BstNI CCWGG 1 cut(s) 868
BstNSI RCATGY 1 cut(s) 64
BstPAI GACNNNNGTC 1 cut(s) 1091
BstSCI CCNGG 1 cut(s) 866
BstSFI CTRYAG 3 cut(s) 497, 531, 601
BstSLI GKGCMC 1 cut(s) 844
BstV1I GCAGC 6 cut(s) 483, 565, 568, 709, 712, 990
BstV2I GAAGAC 2 cut(s) 985, 1150
BstX2I RGATCY 3 cut(s) 295, 899, 1168
BstYI RGATCY 3 cut(s) 295, 899, 1168
Bsu36I CCTNAGG 1 cut(s) 577
BsuRI GGCC 3 cut(s) 150, 520, 590
BtgI CCRYGG 3 cut(s) 42, 151, 1056
BtsCI GGATG 4 cut(s) 225, 813, 933, 1126
BtsI GCAGTG 1 cut(s) 589
BtsIMutI CAGTG 2 cut(s) 589, 879
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 1 cut(s) 561
CciI TCATGA 2 cut(s) 66, 111
CfoI GCGC 3 cut(s) 140, 731, 795
Cfr10I RCCGGY 2 cut(s) 520, 590
Cfr13I GGNCC 1 cut(s) 178
CseI GACGC 5 cut(s) 189, 824, 934, 1009, 1030
Csp6I GTAC 1 cut(s) 251
CviQI GTAC 1 cut(s) 251
DdeI CTNAG 4 cut(s) 577, 824, 882, 1187
DinI GGCGCC 1 cut(s) 139
DpnI GATC 8 cut(s) 56, 224, 258, 297, 484, 901, 1170, 1175
DpnII GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
EaeI YGGCCR 1 cut(s) 148
Eam1104I CTCTTC 3 cut(s) 348, 636, 644
EarI CTCTTC 3 cut(s) 348, 636, 644
EciI GGCGGA 1 cut(s) 552
Eco130I CCWWGG 3 cut(s) 42, 151, 1056
Eco47I GGWCC 1 cut(s) 178
Eco47III AGCGCT 1 cut(s) 794
Eco81I CCTNAGG 1 cut(s) 577
EcoNI CCTNNNNNAGG 1 cut(s) 737
EcoRI GAATTC 2 cut(s) 448, 466
EcoRII CCWGG 1 cut(s) 866
EcoT14I CCWWGG 3 cut(s) 42, 151, 1056
EgeI GGCGCC 1 cut(s) 139
EheI GGCGCC 1 cut(s) 139
ErhI CCWWGG 3 cut(s) 42, 151, 1056
FaqI GGGAC 3 cut(s) 805, 896, 932
FbaI TGATCA 3 cut(s) 54, 256, 1173
FblI GTMKAC 3 cut(s) 807, 1062, 1145
Fnu4HI GCNGC 7 cut(s) 497, 554, 557, 698, 701, 943, 1004
FokI GGATG 4 cut(s) 212, 800, 920, 1113
Fsp4HI GCNGC 7 cut(s) 497, 554, 557, 698, 701, 943, 1004
FspBI CTAG 5 cut(s) 29, 182, 689, 707, 975
GlaI GCGC 3 cut(s) 139, 730, 794
GluI GCNGC 7 cut(s) 497, 554, 557, 698, 701, 943, 1004
GsaI CCCAGC 2 cut(s) 567, 835
GsuI CTGGAG 1 cut(s) 474
HaeII RGCGCY 3 cut(s) 141, 732, 796
HaeIII GGCC 3 cut(s) 150, 520, 590
HapII CCGG 4 cut(s) 463, 521, 591, 608
HgaI GACGC 5 cut(s) 189, 824, 934, 1009, 1030
HhaI GCGC 3 cut(s) 140, 731, 795
Hin1I GRCGYC 4 cut(s) 138, 945, 1041, 1092
Hin6I GCGC 3 cut(s) 138, 729, 793
HinP1I GCGC 3 cut(s) 138, 729, 793
HincII GTYRAC 2 cut(s) 1063, 1146
HindII GTYRAC 2 cut(s) 1063, 1146
HindIII AAGCTT 2 cut(s) 325, 405
HinfI GANTC 4 cut(s) 108, 1046, 1080, 1208
HpaII CCGG 4 cut(s) 463, 521, 591, 608
HphI GGTGA 4 cut(s) 31, 70, 560, 742
Hpy166II GTNNAC 4 cut(s) 808, 999, 1063, 1146
Hpy188I TCNGA 4 cut(s) 304, 675, 1030, 1173
Hpy188III TCNNGA 6 cut(s) 67, 112, 368, 453, 1084, 1105
Hpy8I GTNNAC 4 cut(s) 808, 999, 1063, 1146
Hpy99I CGWCG 5 cut(s) 840, 1046, 1067, 1106, 1150
HpyAV CCTTC 5 cut(s) 64, 539, 743, 860, 970
HpyCH4III ACNGT 4 cut(s) 19, 754, 910, 1026
HpyCH4IV ACGT 4 cut(s) 116, 1092, 1101, 1148
HpyCH4V TGCA 4 cut(s) 499, 624, 1006, 1098
HpyF10VI GCNNNNNNNGC 2 cut(s) 569, 709
HpyF3I CTNAG 4 cut(s) 577, 824, 882, 1187
HpySE526I ACGT 4 cut(s) 116, 1092, 1101, 1148
Hsp92I GRCGYC 4 cut(s) 138, 945, 1041, 1092
HspAI GCGC 3 cut(s) 138, 729, 793
KasI GGCGCC 1 cut(s) 137
Ksp22I TGATCA 3 cut(s) 54, 256, 1173
Kzo9I GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
LmnI GCTCC 4 cut(s) 477, 694, 800, 1221
Lsp1109I GCAGC 6 cut(s) 483, 565, 568, 709, 712, 990
MaeI CTAG 5 cut(s) 29, 182, 689, 707, 975
MaeII ACGT 4 cut(s) 116, 1092, 1101, 1148
MaeIII GTNAC 3 cut(s) 37, 155, 773
MalI GATC 8 cut(s) 56, 224, 258, 297, 484, 901, 1170, 1175
MboI GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
MflI RGATCY 3 cut(s) 295, 899, 1168
MhlI GDGCHC 3 cut(s) 17, 714, 844
MlsI TGGCCA 1 cut(s) 150
MluCI AATT 5 cut(s) 270, 448, 466, 801, 1033
MluNI TGGCCA 1 cut(s) 150
Mly113I GGCGCC 1 cut(s) 138
MlyI GAGTC 1 cut(s) 117
MmeI TCCRAC 3 cut(s) 106, 191, 653
Mox20I TGGCCA 1 cut(s) 150
MscI TGGCCA 1 cut(s) 150
MseI TTAA 1 cut(s) 410
MslI CAYNNNNRTG 1 cut(s) 65
Msp20I TGGCCA 1 cut(s) 150
MspI CCGG 4 cut(s) 463, 521, 591, 608
MspR9I CCNGG 1 cut(s) 868
Mva1269I GAATGC 2 cut(s) 439, 626
MvaI CCWGG 1 cut(s) 868
MwoI GCNNNNNNNGC 2 cut(s) 569, 709
NarI GGCGCC 1 cut(s) 138
NcoI CCATGG 3 cut(s) 42, 151, 1056
NdeII GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
NlaIV GGNNCC 2 cut(s) 139, 297
NmuCI GTSAC 2 cut(s) 37, 773
NspI RCATGY 1 cut(s) 64
NspV TTCGAA 1 cut(s) 1206
PagI TCATGA 2 cut(s) 66, 111
PaqCI CACCTGC 1 cut(s) 490
PcsI WCGNNNNNNNCGW 1 cut(s) 1098
PctI GAATGC 2 cut(s) 439, 626
PfeI GAWTC 3 cut(s) 1046, 1080, 1208
PkrI GCNGC 7 cut(s) 498, 555, 558, 699, 702, 944, 1005
PleI GAGTC 1 cut(s) 116
PluTI GGCGCC 1 cut(s) 141
PpsI GAGTC 1 cut(s) 116
PshAI GACNNNNGTC 1 cut(s) 1091
Psp6I CCWGG 1 cut(s) 866
PspFI CCCAGC 2 cut(s) 563, 831
PspGI CCWGG 1 cut(s) 866
PspN4I GGNNCC 2 cut(s) 139, 297
PspPI GGNCC 1 cut(s) 178
PstI CTGCAG 1 cut(s) 501
PsuI RGATCY 3 cut(s) 295, 899, 1168
RsaI GTAC 1 cut(s) 252
RsaNI GTAC 1 cut(s) 251
RseI CAYNNNNRTG 1 cut(s) 65
SalI GTCGAC 2 cut(s) 1061, 1144
SaqAI TTAA 1 cut(s) 410
SatI GCNGC 7 cut(s) 497, 554, 557, 698, 701, 943, 1004
Sau3AI GATC 8 cut(s) 54, 222, 256, 295, 482, 899, 1168, 1173
Sau96I GGNCC 1 cut(s) 178
ScaI AGTACT 1 cut(s) 252
SchI GAGTC 1 cut(s) 117
ScrFI CCNGG 1 cut(s) 868
SduI GDGCHC 3 cut(s) 17, 714, 844
SfcI CTRYAG 3 cut(s) 497, 531, 601
SfoI GGCGCC 1 cut(s) 139
SfuI TTCGAA 1 cut(s) 1206
SinI GGWCC 1 cut(s) 178
SmiMI CAYNNNNRTG 1 cut(s) 65
SmlI CTYRAG 2 cut(s) 713, 737
SmoI CTYRAG 2 cut(s) 713, 737
SpeI ACTAGT 1 cut(s) 706
Sse9I AATT 5 cut(s) 270, 448, 466, 801, 1033
SsiI CCGC 3 cut(s) 537, 692, 942
SspDI GGCGCC 1 cut(s) 137
SspMI CTAG 5 cut(s) 29, 182, 689, 707, 975
StyD4I CCNGG 1 cut(s) 866
StyI CCWWGG 3 cut(s) 42, 151, 1056
TaaI ACNGT 4 cut(s) 19, 754, 910, 1026
TaiI ACGT 4 cut(s) 119, 1095, 1104, 1151
TasI AATT 5 cut(s) 270, 448, 466, 801, 1033
TatI WGTACW 1 cut(s) 250
TauI GCSGC 1 cut(s) 945
TfiI GAWTC 3 cut(s) 1046, 1080, 1208
Tru1I TTAA 1 cut(s) 410
Tru9I TTAA 1 cut(s) 410
TscAI CASTG 2 cut(s) 589, 886
TseFI GTSAC 2 cut(s) 37, 773
TseI GCWGC 6 cut(s) 496, 553, 556, 697, 700, 1003
Tsp45I GTSAC 2 cut(s) 37, 773
TspDTI ATGAA 4 cut(s) 83, 366, 802, 1141
TspGWI ACGGA 2 cut(s) 288, 1103
TspRI CASTG 2 cut(s) 589, 886
VpaK11BI GGWCC 1 cut(s) 178
XagI CCTNNNNNAGG 1 cut(s) 737
XapI RAATTY 3 cut(s) 448, 466, 1033
XceI RCATGY 1 cut(s) 64
XmiI GTMKAC 3 cut(s) 807, 1062, 1145
XspI CTAG 5 cut(s) 29, 182, 689, 707, 975
ZraI GACGTC 1 cut(s) 1093
ZrmI AGTACT 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.