Rorug05G0155000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0019508
Physical Location & Seq
Reverse (-)
14426486 .. 14429725
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0155000.1

Sequence Viewer

Length: 2991 bp
ATGGATAGCTACACTCACTATTTACTCCTTTTGTTCTTGGCCTCTTCATATCTTCACACCAGCAACCTATGTTTCTGTTTGGGTGATGAACTTCCAAGCAGTGTGAACTCATCATGCATCGATGAAGAAAGACGAGCGCTCGTCAGCTTTAAAGAGGATATCGTTGATCCTTCTGGTAGGCTTTCTTCTTGGGTGGGCAACGATTGCTGTCAATGGAGTGGTATTTCATGCAACAACCGCACGGGTCTCGTCGAAAAGATGGATCTTCGGAATCTGTATAAGTCGCCCCTTGGTGTCGAAGAGTGGGAAGATCCGGCTTATGAAAGTTCTTGCTTGGGTGGTAAGATAAGTCCATCTCTGCTTGTCTTGAATCATTTATATTACCTAGACCTTAGTAGAAGTCACTTCGTAGGGATTCAAATTCCTATGTTCCTTGGGAAGCTTACAAGTCTGAGGTATCTCAATCTCTCCTCGGCATCTTTGGGAGGAGAGATTCCGCCTTCTCTTGGTAACTTGTCAAACTTGAACTATCTTGACCTCAATCGGAATTCCGACTTGAATTCCACAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTACCTTAATCTCGGAGAAGTGGACCTTAGTAACACAGGAGTAAGTTGGCTACCCGCTGTCAACACAATTCCTTCACTGTTAGAATTGCACTTGTCACTTTGCCGGATCAGTGGAAGCCTTCCCCTTTCGTTGCCCACAATTAACTTTACATCCCTTTTGATCCTTGATTTGTCAGAGAATTTTCTAAATTCTTCGATTCCGGGATGGTTTTTTAATCTTACTAGCCTCAGGTTACTTAACCTAAGGGGGAACTCTTTCAGCGGTCCATTTCCTGGTGAGGTTGAAAACCTCAAATCTCTAGAAGTCCTTGATTTGTCTGCTATGGGACTTGAAGGTCGAATTCCCAAACTCATTGGAAACTTGTGCAATCTAAAGACATTAAATCTTGCGGGAAATAGATTTGATGGGGGTTTTGAGGACTTGTTGAATGGTTTCTCATATTGCACAAGTAATTCATTAGAGTCAATAGATGTGTCTTCAAATAGGTTGGTGAGTGAATTGCCTACCTCCTTGGGAATGCTAAAAAACCTGCAACATCTTCACCTCACCCTGAACTCTTTTTGGGGCTCTATTCCAGAATCTATTGGAAACTTGTCATCCTTGGAAACACTAGATCTCTTTGCAAATCAAATGAACGGGTCGATACCTGAAAGTTTTGGACAACTCTCTAAACTAGTTCACCTAGATCTTTCTTTGAATTCGTGGGAAGGCATTTTAAGGGAAGCACATATGATAAACCTAACAAGTTTAGAGTACATGGCACTAGACACAGACCGACCCATGTCCCTCATTTTTAATGTGAGTCATGAGTGGGTTCCTCCTTTCAAGCTACAAACAATTCAAATTAGAGACTGTCAAGTAGGTACTTTTGGCGTATGGCTTCAATCCCAAACTGAACTAGAGTATGTCACCCTTCATAATACTAGAATTTTGGATTTCATACCAAATGAATGGTTTTTGAAGATATCTTCCCGAGTTGAATATTTGGATTTATCTTACAACCAAATCCATGGAAAGCTTCCATTCCATCTGAAATTTCCAAAACTAGGAGCTATATATTTGAGTCATAATCAATTTGAGGGCTCACTTCCACTTTGGTCTACTAATGCCAGCCTCCTTGGTCTTGAAAGCAATTCATTTTCCGGGCCAATACCCTCGAACTTTGACCAATTGTTTCCCAACATGAAGGAATTGTATCTATCCGATAATCAATTCAATGGTACTATTCCACCCTCTATTTGCAACATCCAAAGCTTGTCAATCTTTTCAGCAAGAAGCAATCACTTATCTGGGGAGTTCCCTCAAGCTTGGAGTTTGTGGCCACAAATATTCATAATAGATGTAGGGAACAACAGTCTTTCCGGTAATATCCCCACTTCTTTGGGTGTACCGAGATCTCTTCTTATGTTGATCATGAACAACAACAATTTTGTAGGGAACATTCCATCTTCCTTCAAAAATTGTTCTTTTATGAGGGTTGATCTTGGAGGCAACAGATTTACAGGAGAAATACCTTTATGGATCGGCAACATGACCGGTTTGTCCATGCTTCGATTGAGGTCCAATTTTCTAGCCGGACACATCCCTCACCAGTTGTGCTATCTCACCGACCTGCATATCCTAGACCTTGGTCACAACAACTTTTCAGGGACTATTCCCAAGTGTTTGAATAACTTGACTTTCCTAACATTCCGTGACAGCCACCAAACGGATTACATATATACAGGAGAATCAACAAGGATGACACTGAAAGGAAGTGAACTCGACTATACAATCAGCAACTTGTACTTGGTGAAGAGCATTGATCTTTCATCAAATAATTTAGAAGGTGGAATTCCTGAACAAATAAGCAGCCTCGTTGGATTGGGAGCCCTAAACTTGTCGATGAATCAATTGAGTGGAAATATTTCCACCAAGATTGGAAACTTGCGTTGGTTGGAAACTCTTGATCTCTCACACAACCATCTTTCGGGACAGATTCCTCAAAGCTTGTCTTCTTTGACATTTTTGTCACACTTGAACTTGTCTTATAACAACCTGTCCGGAAGTATCCCTTCAGGCCCCCAACTCCAAACACAAGAGAATTCATCATATGTGGGGAATCCATCGCTCTGTGGATTTCCTCTTTCAACCAAGTGCGAGGGGTATGACACACCTACACAACAAACTTTGCTCGGAGGGGACAGTGAAGATGAAGATGACAACGGGAAGCTTGGTTTCTATATCAGCATGGTCCTTGGGTTTGTCATAAGCTTTTGGGGCGTTTGTGGCACTTTGCTCCTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTCTTTGACAACATCAAAGACAAAATAGCACTGGCAATTGCATTGAAAGTCGCTCATTTTCAAAGAAGGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

996

Amino Acids

110.78

Weight (kDa)

5.36

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 78 3.2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 122 - 211 2.6e-07 Leucine-rich repeat region
LRR_14 PF23598 243 - 336 8.7e-08 Leucine-rich repeat region
LRR_8 PF13855 353 - 411 5.4e-06 Leucine rich repeat
LRR_14 PF23598 353 - 504 1.7e-13 Leucine-rich repeat region
LRR_4 PF12799 847 - 885 9.2e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2634
AasI GACNNNNNNGTC 3 cut(s) 936, 2143, 2611
Acc36I ACCTGC 2 cut(s) 1140, 2223
AccB7I CCANNNNNTGG 1 cut(s) 875
AccI GTMKAC 1 cut(s) 1703
AccIII TCCGGA 1 cut(s) 2645
AciI CCGC 5 cut(s) 238, 497, 657, 864, 992
AclWI GGATC 6 cut(s) 161, 270, 305, 716, 757, 2132
AcoI YGGCCR 1 cut(s) 1922
AcuI CTGAAG 2 cut(s) 2643, 2906
AfaI GTAC 6 cut(s) 605, 1358, 1468, 1825, 1992, 2390
AfeI AGCGCT 1 cut(s) 138
AfiI CCNNNNNNNGG 5 cut(s) 506, 875, 1649, 2311, 2572
AgeI ACCGGT 1 cut(s) 2138
AhlI ACTAGT 1 cut(s) 1276
AjnI CCWGG 1 cut(s) 874
AjuI GAANNNNNNNTTGG 2 cut(s) 2518, 2550
Alw26I GTCTC 2 cut(s) 251, 1446
AlwI GGATC 6 cut(s) 161, 270, 305, 716, 757, 2132
Ama87I CYCGRG 1 cut(s) 1575
Aor13HI TCCGGA 1 cut(s) 2645
Aor51HI AGCGCT 1 cut(s) 138
AoxI GGCC 4 cut(s) 39, 1748, 1922, 2662
ApeKI GCWGC 1 cut(s) 2454
AsiGI ACCGGT 1 cut(s) 2138
Asp700I GAANNNNTTC 3 cut(s) 857, 1034, 2509
AspLEI GCGC 1 cut(s) 139
AspS9I GGNCC 6 cut(s) 625, 866, 1748, 2163, 2663, 2836
AsuC2I CCSGG 2 cut(s) 804, 1747
AvaI CYCGRG 1 cut(s) 1575
AvaII GGWCC 4 cut(s) 625, 866, 2163, 2836
AxyI CCTNAGG 2 cut(s) 830, 845
BalI TGGCCA 1 cut(s) 1924
BanII GRGCYC 3 cut(s) 1172, 1688, 2476
BarI GAAGNNNNNNTAC 2 cut(s) 169, 201
BbsI GAAGAC 2 cut(s) 1071, 2589
BbvI GCAGC 1 cut(s) 2466
BccI CCATC 8 cut(s) 253, 361, 801, 1001, 1638, 2056, 2574, 2716
BcgI CGANNNNNNTGC 2 cut(s) 229, 263
BciT130I CCWGG 1 cut(s) 876
BciVI GTATCC 1 cut(s) 2663
BclI TGATCA 1 cut(s) 2013
BcnI CCSGG 2 cut(s) 804, 1747
BcoDI GTCTC 2 cut(s) 251, 1446
BcuI ACTAGT 1 cut(s) 1276
BfoI RGCGCY 1 cut(s) 140
BfuAI ACCTGC 2 cut(s) 1140, 2223
BfuI GTATCC 1 cut(s) 2663
BglII AGATCT 3 cut(s) 1216, 1288, 1997
BisI GCNGC 1 cut(s) 2455
BlsI GCNGC 1 cut(s) 2456
Bme1390I CCNGG 3 cut(s) 804, 876, 1747
Bme18I GGWCC 4 cut(s) 625, 866, 2163, 2836
BmeT110I CYCGRG 1 cut(s) 1575
BmgT120I GGNCC 6 cut(s) 625, 866, 1748, 2163, 2663, 2836
BmiI GGNNCC 3 cut(s) 1419, 2473, 2665
BmrFI CCNGG 3 cut(s) 804, 876, 1747
BmsI GCATC 2 cut(s) 126, 485
BoxI GACNNNNGTC 2 cut(s) 1384, 2232
BpiI GAAGAC 2 cut(s) 1071, 2589
BpuEI CTTGAG 1 cut(s) 1890
BpuMI CCSGG 2 cut(s) 804, 1747
Bsa29I ATCGAT 1 cut(s) 120
BsaI GGTCTC 1 cut(s) 251
BsaJI CCNNGG 9 cut(s) 289, 433, 471, 1113, 1203, 1612, 1720, 2230, 2839
BsaWI WCCGGW 3 cut(s) 1964, 2138, 2645
Bsc4I CCNNNNNNNGG 5 cut(s) 506, 875, 1649, 2311, 2572
Bse118I RCCGGY 1 cut(s) 2138
Bse1I ACTGG 2 cut(s) 2194, 2952
Bse21I CCTNAGG 2 cut(s) 830, 845
BseAI TCCGGA 1 cut(s) 2645
BseBI CCWGG 1 cut(s) 876
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 9 cut(s) 289, 433, 471, 1113, 1203, 1612, 1720, 2230, 2839
BseGI GGATG 6 cut(s) 752, 812, 1199, 1848, 2184, 2349
BseLI CCNNNNNNNGG 5 cut(s) 506, 875, 1649, 2311, 2572
BseMII CTCAG 2 cut(s) 443, 844
BseNI ACTGG 2 cut(s) 2194, 2952
BseRI GAGGAG 2 cut(s) 460, 501
BseXI GCAGC 1 cut(s) 2466
BshFI GGCC 4 cut(s) 41, 1750, 1924, 2664
BshTI ACCGGT 1 cut(s) 2138
BshVI ATCGAT 1 cut(s) 120
BsiHKCI CYCGRG 1 cut(s) 1575
BsiSI CCGG 8 cut(s) 314, 706, 803, 1746, 1965, 2139, 2178, 2646
BslFI GGGAC 5 cut(s) 942, 1372, 2266, 2589, 2798
BslI CCNNNNNNNGG 5 cut(s) 506, 875, 1649, 2311, 2572
BsmAI GTCTC 2 cut(s) 251, 1446
BsmFI GGGAC 5 cut(s) 942, 1372, 2266, 2589, 2798
BsmI GAATGC 1 cut(s) 1125
BsnI GGCC 4 cut(s) 41, 1750, 1924, 2664
Bso31I GGTCTC 1 cut(s) 251
BsoBI CYCGRG 1 cut(s) 1575
Bsp1286I GDGCHC 3 cut(s) 1172, 1688, 2476
Bsp13I TCCGGA 1 cut(s) 2645
Bsp19I CCATGG 1 cut(s) 1612
BspACI CCGC 5 cut(s) 238, 497, 657, 864, 992
BspANI GGCC 4 cut(s) 41, 1750, 1924, 2664
BspCNI CTCAG 2 cut(s) 444, 843
BspDI ATCGAT 1 cut(s) 120
BspEI TCCGGA 1 cut(s) 2645
BspHI TCATGA 2 cut(s) 1408, 2016
BspLI GGNNCC 3 cut(s) 1419, 2473, 2665
BspMI ACCTGC 2 cut(s) 1140, 2223
BspPI GGATC 6 cut(s) 161, 270, 305, 716, 757, 2132
BspQI GCTCTTC 1 cut(s) 2393
BspTNI GGTCTC 1 cut(s) 251
BsrFI RCCGGY 1 cut(s) 2138
BsrI ACTGG 2 cut(s) 2194, 2952
BssAI RCCGGY 1 cut(s) 2138
BssECI CCNNGG 9 cut(s) 289, 433, 471, 1113, 1203, 1612, 1720, 2230, 2839
BssT1I CCWWGG 8 cut(s) 289, 433, 1113, 1203, 1612, 1720, 2230, 2839
Bst2UI CCWGG 1 cut(s) 876
Bst4CI ACNGT 4 cut(s) 681, 1457, 1958, 2789
Bst6I CTCTTC 5 cut(s) 49, 294, 598, 2007, 2393
BstAPI GCANNNNNTGC 1 cut(s) 204
BstC8I GCNNGC 1 cut(s) 1714
BstDEI CTNAG 5 cut(s) 392, 452, 629, 830, 845
BstDSI CCRYGG 1 cut(s) 1612
BstF5I GGATG 6 cut(s) 752, 812, 1199, 1848, 2184, 2349
BstH2I RGCGCY 1 cut(s) 140
BstHHI GCGC 1 cut(s) 139
BstMAI GTCTC 2 cut(s) 251, 1446
BstMWI GCNNNNNNNGC 4 cut(s) 204, 237, 2862, 2871
BstNI CCWGG 1 cut(s) 876
BstPAI GACNNNNGTC 2 cut(s) 1384, 2232
BstSCI CCNGG 3 cut(s) 802, 874, 1745
BstV1I GCAGC 1 cut(s) 2466
BstV2I GAAGAC 2 cut(s) 1071, 2589
BstX2I RGATCY 5 cut(s) 262, 310, 1216, 1288, 1997
BstXI CCANNNNNNTGG 3 cut(s) 1554, 1613, 1984
BstYI RGATCY 5 cut(s) 262, 310, 1216, 1288, 1997
Bsu15I ATCGAT 1 cut(s) 120
Bsu36I CCTNAGG 2 cut(s) 830, 845
BsuI GTATCC 1 cut(s) 2663
BsuRI GGCC 4 cut(s) 41, 1750, 1924, 2664
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 1 cut(s) 1612
BtgZI GCGATG 1 cut(s) 2694
BtsCI GGATG 6 cut(s) 752, 812, 1199, 1848, 2184, 2349
BtsI GCAGTG 1 cut(s) 106
BtsIMutI CAGTG 6 cut(s) 106, 677, 718, 2348, 2794, 2945
BveI ACCTGC 2 cut(s) 1140, 2223
Cac8I GCNNGC 1 cut(s) 1714
CciI TCATGA 2 cut(s) 1408, 2016
CfoI GCGC 1 cut(s) 139
Cfr10I RCCGGY 1 cut(s) 2138
Cfr13I GGNCC 6 cut(s) 625, 866, 1748, 2163, 2663, 2836
ClaI ATCGAT 1 cut(s) 120
Csp6I GTAC 6 cut(s) 604, 1357, 1467, 1824, 1991, 2389
CspAI ACCGGT 1 cut(s) 2138
CspCI CAANNNNNGTGG 2 cut(s) 2503, 2538
CviQI GTAC 6 cut(s) 604, 1357, 1467, 1824, 1991, 2389
DdeI CTNAG 5 cut(s) 392, 452, 629, 830, 845
DraI TTTAAA 1 cut(s) 151
DrdI GACNNNNNNGTC 3 cut(s) 936, 2143, 2611
DseDI GACNNNNNNGTC 3 cut(s) 936, 2143, 2611
EaeI YGGCCR 1 cut(s) 1922
Eam1104I CTCTTC 5 cut(s) 49, 294, 598, 2007, 2393
EarI CTCTTC 5 cut(s) 49, 294, 598, 2007, 2393
EciI GGCGGA 1 cut(s) 486
Eco130I CCWWGG 8 cut(s) 289, 433, 1113, 1203, 1612, 1720, 2230, 2839
Eco24I GRGCYC 3 cut(s) 1172, 1688, 2476
Eco31I GGTCTC 1 cut(s) 251
Eco32I GATATC 2 cut(s) 160, 1569
Eco47I GGWCC 4 cut(s) 625, 866, 2163, 2836
Eco47III AGCGCT 1 cut(s) 138
Eco57I CTGAAG 2 cut(s) 2643, 2906
Eco81I CCTNAGG 2 cut(s) 830, 845
Eco88I CYCGRG 1 cut(s) 1575
EcoO109I RGGNCCY 1 cut(s) 2663
EcoRI GAATTC 6 cut(s) 547, 559, 942, 1300, 2436, 2686
EcoRII CCWGG 1 cut(s) 874
EcoRV GATATC 2 cut(s) 160, 1569
EcoT14I CCWWGG 8 cut(s) 289, 433, 1113, 1203, 1612, 1720, 2230, 2839
EcoT22I ATGCAT 1 cut(s) 119
EcoT38I GRGCYC 3 cut(s) 1172, 1688, 2476
ErhI CCWWGG 8 cut(s) 289, 433, 1113, 1203, 1612, 1720, 2230, 2839
FalI AAGNNNNNCTT 6 cut(s) 612, 644, 2581, 2613, 2641, 2673
FaqI GGGAC 5 cut(s) 942, 1372, 2266, 2589, 2798
FauI CCCGC 2 cut(s) 664, 985
FauNDI CATATG 2 cut(s) 1332, 2695
FbaI TGATCA 1 cut(s) 2013
FblI GTMKAC 1 cut(s) 1703
Fnu4HI GCNGC 1 cut(s) 2455
FokI GGATG 6 cut(s) 739, 819, 1186, 1835, 2171, 2356
FriOI GRGCYC 3 cut(s) 1172, 1688, 2476
Fsp4HI GCNGC 1 cut(s) 2455
GlaI GCGC 1 cut(s) 138
GluI GCNGC 1 cut(s) 2455
HaeII RGCGCY 1 cut(s) 140
HaeIII GGCC 4 cut(s) 41, 1750, 1924, 2664
HapII CCGG 8 cut(s) 314, 706, 803, 1746, 1965, 2139, 2178, 2646
HhaI GCGC 1 cut(s) 139
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HindIII AAGCTT 7 cut(s) 440, 1619, 1855, 1908, 2590, 2813, 2854
HpaII CCGG 8 cut(s) 314, 706, 803, 1746, 1965, 2139, 2178, 2646
Hpy166II GTNNAC 7 cut(s) 106, 625, 664, 1282, 1704, 1991, 2363
Hpy188I TCNGA 9 cut(s) 270, 453, 546, 553, 617, 778, 1635, 1807, 2780
Hpy8I GTNNAC 7 cut(s) 106, 625, 664, 1282, 1704, 1991, 2363
Hpy99I CGWCG 1 cut(s) 254
HpyCH4III ACNGT 4 cut(s) 681, 1457, 1958, 2789
HpyF10VI GCNNNNNNNGC 4 cut(s) 204, 237, 2862, 2871
HpyF3I CTNAG 5 cut(s) 392, 452, 629, 830, 845
HspAI GCGC 1 cut(s) 137
Kpn2I TCCGGA 1 cut(s) 2645
Ksp22I TGATCA 1 cut(s) 2013
LguI GCTCTTC 1 cut(s) 2393
LmnI GCTCC 3 cut(s) 1652, 2471, 2886
Lsp1109I GCAGC 1 cut(s) 2466
LweI GCATC 2 cut(s) 126, 485
MaeIII GTNAC 9 cut(s) 401, 509, 632, 696, 834, 1510, 2234, 2297, 2613
MfeI CAATTG 3 cut(s) 1772, 2495, 2952
MflI RGATCY 5 cut(s) 262, 310, 1216, 1288, 1997
MhlI GDGCHC 3 cut(s) 1172, 1688, 2476
MlsI TGGCCA 1 cut(s) 1924
MluNI TGGCCA 1 cut(s) 1924
MlyI GAGTC 3 cut(s) 1073, 1414, 1675
MmeI TCCRAC 3 cut(s) 576, 2443, 2520
Mox20I TGGCCA 1 cut(s) 1924
Mph1103I ATGCAT 1 cut(s) 119
MroI TCCGGA 1 cut(s) 2645
MroXI GAANNNNTTC 3 cut(s) 857, 1034, 2509
MscI TGGCCA 1 cut(s) 1924
MseI TTAA 8 cut(s) 150, 609, 744, 816, 840, 983, 1319, 1398
Msp20I TGGCCA 1 cut(s) 1924
MspA1I CMGCKG 2 cut(s) 659, 864
MspI CCGG 8 cut(s) 314, 706, 803, 1746, 1965, 2139, 2178, 2646
MspR9I CCNGG 3 cut(s) 804, 876, 1747
MunI CAATTG 3 cut(s) 1772, 2495, 2952
Mva1269I GAATGC 1 cut(s) 1125
MvaI CCWGG 1 cut(s) 876
MwoI GCNNNNNNNGC 4 cut(s) 204, 237, 2862, 2871
NciI CCSGG 2 cut(s) 804, 1747
NcoI CCATGG 1 cut(s) 1612
NdeI CATATG 2 cut(s) 1332, 2695
NlaIV GGNNCC 3 cut(s) 1419, 2473, 2665
NmeAIII GCCGAG 1 cut(s) 452
NmuCI GTSAC 6 cut(s) 401, 696, 1510, 2234, 2297, 2613
NsiI ATGCAT 1 cut(s) 119
PagI TCATGA 2 cut(s) 1408, 2016
PciSI GCTCTTC 1 cut(s) 2393
PctI GAATGC 1 cut(s) 1125
PdmI GAANNNNTTC 3 cut(s) 857, 1034, 2509
PflMI CCANNNNNTGG 1 cut(s) 875
PfoI TCCNGGA 1 cut(s) 802
PinAI ACCGGT 1 cut(s) 2138
PkrI GCNGC 1 cut(s) 2456
PleI GAGTC 3 cut(s) 1072, 1413, 1674
PpsI GAGTC 3 cut(s) 1072, 1413, 1674
PshAI GACNNNNGTC 2 cut(s) 1384, 2232
PsiI TTATAA 1 cut(s) 2634
Psp6I CCWGG 1 cut(s) 874
PspGI CCWGG 1 cut(s) 874
PspN4I GGNNCC 3 cut(s) 1419, 2473, 2665
PspPI GGNCC 6 cut(s) 625, 866, 1748, 2163, 2663, 2836
PsuI RGATCY 5 cut(s) 262, 310, 1216, 1288, 1997
RsaI GTAC 6 cut(s) 605, 1358, 1468, 1825, 1992, 2390
RsaNI GTAC 6 cut(s) 604, 1357, 1467, 1824, 1991, 2389
SapI GCTCTTC 1 cut(s) 2393
SaqAI TTAA 8 cut(s) 150, 609, 744, 816, 840, 983, 1319, 1398
SatI GCNGC 1 cut(s) 2455
Sau96I GGNCC 6 cut(s) 625, 866, 1748, 2163, 2663, 2836
SchI GAGTC 3 cut(s) 1073, 1414, 1675
ScrFI CCNGG 3 cut(s) 804, 876, 1747
SduI GDGCHC 3 cut(s) 1172, 1688, 2476
SfaNI GCATC 2 cut(s) 126, 485
SinI GGWCC 4 cut(s) 625, 866, 2163, 2836
SmlI CTYRAG 1 cut(s) 1905
SmoI CTYRAG 1 cut(s) 1905
SpeI ACTAGT 1 cut(s) 1276
SsiI CCGC 5 cut(s) 238, 497, 657, 864, 992
SspI AATATT 3 cut(s) 1586, 1932, 2509
StyD4I CCNGG 3 cut(s) 802, 874, 1745
StyI CCWWGG 8 cut(s) 289, 433, 1113, 1203, 1612, 1720, 2230, 2839
TaaI ACNGT 4 cut(s) 681, 1457, 1958, 2789
TaqII GACCGA 1 cut(s) 1392
TatI WGTACW 2 cut(s) 1356, 2388
Tru1I TTAA 8 cut(s) 150, 609, 744, 816, 840, 983, 1319, 1398
Tru9I TTAA 8 cut(s) 150, 609, 744, 816, 840, 983, 1319, 1398
TscAI CASTG 6 cut(s) 106, 684, 718, 2355, 2794, 2952
TseFI GTSAC 6 cut(s) 401, 696, 1510, 2234, 2297, 2613
TseI GCWGC 1 cut(s) 2454
Tsp45I GTSAC 6 cut(s) 401, 696, 1510, 2234, 2297, 2613
TspGWI ACGGA 2 cut(s) 2285, 2327
TspRI CASTG 6 cut(s) 106, 684, 718, 2355, 2794, 2952
Van91I CCANNNNNTGG 1 cut(s) 875
VpaK11BI GGWCC 4 cut(s) 625, 866, 2163, 2836
XbaI TCTAGA 1 cut(s) 901
XmiI GTMKAC 1 cut(s) 1703
XmnI GAANNNNTTC 3 cut(s) 857, 1034, 2509
Zsp2I ATGCAT 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.