Rmu_sc0006558.1_g000039

Trafficking protein particle complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006558.1
OG0011907
Physical Location & Seq
Reverse (-)
194398 .. 200801
6404 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1665 bp
atgcctcccgttggtccccgatccggtgatgcaatcttcgctaacgtcgaacgcgtgaatgcggagctgtttactttgacctatggtgccattgtgcgccagctgctcactgatcttgaggaggttgaagaggtcaacaagcagcttgatcaaatgggctataatattgggattcgtctaatcgatgagtttctagcaaaatctaatgtttctagatgcgttgacttcaaagagacagctgaagtaattgcaaagattggcttcaaaatgttcttgggggtcacagcatctgttacaaattgggatgctgatggaacatgctgcagtattgttctggaggacaatcctctggttgattttgttgagcttccagatacttgtcaaggactgtactactgtaacatcttaagtggagtcgttcgaggtgccttagaaatggtatcaatgaaaactgaaatcacctggatccgggatatgcttagaggtgatgatgcattcgagttgcaagttaaactcctgaagcaagttccggaggagtacccgtacaaagatgatgaaccgatctctctctcctctgtgcgtctctctctctccccaatcaccacctccggcgcggcatcgatttacttcaacggcgagttcttgccgagatcagatcggagttttgcgcccatacagaaggacggtgttttttatccagccgggcagaagcgtcggcaaggatttgaacgaatcgacgagaagcatcggaatcgttatcggactgaacgaggttcggccttcaaatcccagaaaccaccgccgaccaccttgaagatctcaactccaggagtccagaaccggccgccccacccccagaaccggccggaaaaccaccgaaccggccgccggaagtatcgaaagtccctctgcccgccgccaagccgagccgccgagcagccaagccataacaattctgccacgtcagcaccacgcaggcatccagtcagcaagccacatcagccacctgtgccacgtcagcagatcggtcaacctgagtcaacgccggtcaaccctccggtcaaccaccgccggcgacttttccggtcagctacagtaactccccctgcagctacagtactttccggcgacgatttttttcgaccatcttttaaggggagaccaaaagccgaactgtgggggttcgcgctcactccaagcttggagcttgtagagtcctccaaacttagaaaaattcctaatttcttggaagcgactacgctcagaaatttaatagtttttcgtggtagcctttttcgctccgaaactaaccctaatcttgtgttgtttttcaggatgagttacctgaacaagttgagctttgtcccactcgagacaactggcgcaggataccataggtgggtccgagatgtgcgccaacatcttaaggctgatggaattctggaaaccatccaagagcctagtcagaacgtgctctcaatagagcaagctactgctttcgaagcaaaacaagctaagaccataattctcatgacaaggcacatgaatgacgcgctccaaaatgaatacctcaatgaggaagacccaagaaaactatgggtagaacttgagcagcgatttggcaacgttcgtgactccctacttcctgatttagaagtgcgatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TRAPP

Protein Analysis

554

Amino Acids

62.81

Weight (kDa)

9.03

Isoelectric Point (pI)

47.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TRAPP PF04051 24 - 171 8.9e-41 Transport protein particle (TRAPP) component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011907)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G54750 AT5G54750
fragaria_vesca FvH4_3g21920
malus_domestica MD03G1210500.v1.1 MD11G1225200.v1.1
prunus_persica Prupe.4G204700_v2.0.a1
pyrus_communis pycom03g15920 pycom11g19870
rosa_chinensis RchiOBHm_Chr5g0037731
rosa_laevigata RLG00000033805
rosa_multiflora Rmu_sc0006558.1_g000039
rosa_roxburghii Rroxscaffold_1G00043170
rosa_rugosa Rorug05G0166800 Rorug05G0166900
rosa_samantha Rh5AG256100 Rh5BG258300 Rh5CG291600 Rh5DG268000
rosa_wichuraiana Rw5G023740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 86, 425
AccII CGCG 4 cut(s) 54, 614, 1187, 1553
AccIII TCCGGA 1 cut(s) 529
AciI CCGC 9 cut(s) 62, 614, 800, 845, 886, 914, 917, 930, 1069
AclI AACGTT 1 cut(s) 1626
AclWI GGATC 3 cut(s) 15, 460, 473
AcoI YGGCCR 3 cut(s) 842, 863, 883
AcsI RAATTY 3 cut(s) 1233, 1267, 1437
AcuI CTGAAG 2 cut(s) 261, 539
AfaI GTAC 4 cut(s) 392, 539, 545, 1119
AfiI CCNNNNNNNGG 8 cut(s) 11, 23, 468, 861, 888, 1176, 1399, 1576
AflII CTTAAG 2 cut(s) 406, 1424
AflIII ACRYGT 1 cut(s) 52
AgsI TTSAA 7 cut(s) 128, 229, 265, 631, 728, 784, 814
AjiI CACGTC 2 cut(s) 963, 1016
AjnI CCWGG 2 cut(s) 461, 826
Alw21I GWGCWC 1 cut(s) 1476
Alw26I GTCTC 4 cut(s) 227, 587, 1153, 1367
AlwI GGATC 3 cut(s) 15, 460, 473
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 1 cut(s) 1370
Aor13HI TCCGGA 1 cut(s) 529
AoxI GGCC 4 cut(s) 777, 842, 863, 883
ApeKI GCWGC 6 cut(s) 103, 142, 321, 937, 1109, 1612
ApoI RAATTY 3 cut(s) 1233, 1267, 1437
AspLEI GCGC 7 cut(s) 99, 614, 670, 1189, 1385, 1416, 1555
AspS9I GGNCC 2 cut(s) 14, 1402
AsuC2I CCSGG 2 cut(s) 470, 703
AsuHPI GGTGA 4 cut(s) 38, 451, 497, 592
AsuII TTCGAA 1 cut(s) 1500
AvaI CYCGRG 1 cut(s) 1370
AvaII GGWCC 2 cut(s) 14, 1402
BamHI GGATCC 1 cut(s) 465
BanI GGYRCC 2 cut(s) 86, 425
BbsI GAAGAC 1 cut(s) 1587
Bbv12I GWGCWC 1 cut(s) 1476
BbvI GCAGC 6 cut(s) 90, 154, 308, 949, 1121, 1624
BccI CCATC 4 cut(s) 305, 1153, 1427, 1457
BceAI ACGGC 1 cut(s) 649
BcgI CGANNNNNNTGC 4 cut(s) 695, 729, 734, 768
BciT130I CCWGG 2 cut(s) 463, 828
BciVI GTATCC 1 cut(s) 1382
BclI TGATCA 1 cut(s) 148
BcnI CCSGG 2 cut(s) 470, 703
BcoDI GTCTC 4 cut(s) 227, 587, 1153, 1367
BfaI CTAG 3 cut(s) 194, 213, 1461
BfmI CTRYAG 4 cut(s) 322, 1092, 1107, 1113
BfrI CTTAAG 2 cut(s) 406, 1424
BfuI GTATCC 1 cut(s) 1382
BglII AGATCT 1 cut(s) 816
BmcAI AGTACT 1 cut(s) 1119
Bme1390I CCNGG 4 cut(s) 463, 470, 703, 828
Bme18I GGWCC 2 cut(s) 14, 1402
BmeT110I CYCGRG 1 cut(s) 1370
BmgBI CACGTC 2 cut(s) 963, 1016
BmgT120I GGNCC 2 cut(s) 14, 1402
BmiI GGNNCC 5 cut(s) 16, 88, 427, 467, 1403
BmrFI CCNGG 4 cut(s) 463, 470, 703, 828
BmsI GCATC 8 cut(s) 19, 206, 295, 296, 481, 626, 754, 988
BpiI GAAGAC 1 cut(s) 1587
BpmI CTGGAG 2 cut(s) 356, 810
Bpu14I TTCGAA 1 cut(s) 1500
BpuEI CTTGAG 2 cut(s) 137, 1628
BpuMI CCSGG 2 cut(s) 470, 703
Bsa29I ATCGAT 2 cut(s) 183, 620
BsaI GGTCTC 1 cut(s) 1153
BsaWI WCCGGW 4 cut(s) 23, 529, 1057, 1083
BsaXI ACNNNNNCTCC 4 cut(s) 527, 557, 1084, 1114
Bsc4I CCNNNNNNNGG 8 cut(s) 11, 23, 468, 861, 888, 1176, 1399, 1576
Bse118I RCCGGY 5 cut(s) 840, 861, 881, 1045, 1071
Bse1I ACTGG 2 cut(s) 983, 1384
BseAI TCCGGA 1 cut(s) 529
BseBI CCWGG 2 cut(s) 463, 828
BseCI ATCGAT 2 cut(s) 183, 620
BseGI GGATG 4 cut(s) 310, 979, 1341, 1449
BseLI CCNNNNNNNGG 8 cut(s) 11, 23, 468, 861, 888, 1176, 1399, 1576
BseMII CTCAG 2 cut(s) 1026, 1276
BseNI ACTGG 2 cut(s) 983, 1384
BseRI GAGGAG 3 cut(s) 134, 548, 562
BseX3I CGGCCG 3 cut(s) 842, 863, 883
BseXI GCAGC 6 cut(s) 90, 154, 308, 949, 1121, 1624
Bsh1236I CGCG 4 cut(s) 54, 614, 1187, 1553
Bsh1285I CGRYCG 3 cut(s) 845, 866, 886
BshFI GGCC 4 cut(s) 779, 844, 865, 885
BshNI GGYRCC 2 cut(s) 86, 425
BshVI ATCGAT 2 cut(s) 183, 620
BsiEI CGRYCG 3 cut(s) 845, 866, 886
BsiHKAI GWGCWC 1 cut(s) 1476
BsiHKCI CYCGRG 1 cut(s) 1370
BslFI GGGAC 2 cut(s) 889, 1349
BslI CCNNNNNNNGG 8 cut(s) 11, 23, 468, 861, 888, 1176, 1399, 1576
BsmAI GTCTC 4 cut(s) 227, 587, 1153, 1367
BsmBI CGTCTC 1 cut(s) 587
BsmFI GGGAC 2 cut(s) 889, 1349
BsmI GAATGC 2 cut(s) 64, 494
BsnI GGCC 4 cut(s) 779, 844, 865, 885
Bso31I GGTCTC 1 cut(s) 1153
BsoBI CYCGRG 1 cut(s) 1370
Bsp119I TTCGAA 1 cut(s) 1500
Bsp1286I GDGCHC 1 cut(s) 1476
Bsp13I TCCGGA 1 cut(s) 529
Bsp143I GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
BspACI CCGC 9 cut(s) 62, 614, 800, 845, 886, 914, 917, 930, 1069
BspANI GGCC 4 cut(s) 779, 844, 865, 885
BspCNI CTCAG 2 cut(s) 1027, 1275
BspDI ATCGAT 2 cut(s) 183, 620
BspEI TCCGGA 1 cut(s) 529
BspFNI CGCG 4 cut(s) 54, 614, 1187, 1553
BspHI TCATGA 1 cut(s) 1530
BspLI GGNNCC 5 cut(s) 16, 88, 427, 467, 1403
BspMAI CTGCAG 2 cut(s) 326, 1111
BspPI GGATC 3 cut(s) 15, 460, 473
BspT104I TTCGAA 1 cut(s) 1500
BspT107I GGYRCC 2 cut(s) 86, 425
BspTI CTTAAG 2 cut(s) 406, 1424
BspTNI GGTCTC 1 cut(s) 1153
BsrFI RCCGGY 5 cut(s) 840, 861, 881, 1045, 1071
BsrI ACTGG 2 cut(s) 983, 1384
BssAI RCCGGY 5 cut(s) 840, 861, 881, 1045, 1071
BssMI GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
Bst2UI CCWGG 2 cut(s) 463, 828
Bst4CI ACNGT 6 cut(s) 390, 398, 686, 1096, 1117, 1176
Bst6I CTCTTC 1 cut(s) 123
BstAFI CTTAAG 2 cut(s) 406, 1424
BstBI TTCGAA 1 cut(s) 1500
BstC8I GCNNGC 6 cut(s) 101, 914, 977, 992, 1073, 1488
BstDEI CTNAG 6 cut(s) 430, 479, 1035, 1226, 1262, 1515
BstENI CCTNNNNNAGG 1 cut(s) 1574
BstF5I GGATG 4 cut(s) 310, 979, 1341, 1449
BstFNI CGCG 4 cut(s) 54, 614, 1187, 1553
BstHHI GCGC 7 cut(s) 99, 614, 670, 1189, 1385, 1416, 1555
BstKTI GATC 9 cut(s) 23, 115, 151, 468, 564, 653, 658, 819, 1026
BstMAI GTCTC 4 cut(s) 227, 587, 1153, 1367
BstMBI GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
BstMCI CGRYCG 3 cut(s) 845, 866, 886
BstMWI GCNNNNNNNGC 9 cut(s) 38, 103, 965, 1000, 1009, 1018, 1296, 1502, 1511
BstNI CCWGG 2 cut(s) 463, 828
BstNSI RCATGY 1 cut(s) 321
BstSCI CCNGG 4 cut(s) 461, 468, 701, 826
BstSFI CTRYAG 4 cut(s) 322, 1092, 1107, 1113
BstUI CGCG 4 cut(s) 54, 614, 1187, 1553
BstV1I GCAGC 6 cut(s) 90, 154, 308, 949, 1121, 1624
BstV2I GAAGAC 1 cut(s) 1587
BstX2I RGATCY 2 cut(s) 465, 816
BstYI RGATCY 2 cut(s) 465, 816
BstZI CGGCCG 3 cut(s) 842, 863, 883
Bsu15I ATCGAT 2 cut(s) 183, 620
BsuI GTATCC 1 cut(s) 1382
BsuRI GGCC 4 cut(s) 779, 844, 865, 885
BsuTUI ATCGAT 2 cut(s) 183, 620
BtrI CACGTC 2 cut(s) 963, 1016
BtsCI GGATG 4 cut(s) 310, 979, 1341, 1449
BtsIMutI CAGTG 1 cut(s) 108
Cac8I GCNNGC 6 cut(s) 101, 914, 977, 992, 1073, 1488
CaiI CAGNNNCTG 1 cut(s) 290
CciI TCATGA 1 cut(s) 1530
CfoI GCGC 7 cut(s) 99, 614, 670, 1189, 1385, 1416, 1555
Cfr10I RCCGGY 5 cut(s) 840, 861, 881, 1045, 1071
Cfr13I GGNCC 2 cut(s) 14, 1402
ClaI ATCGAT 2 cut(s) 183, 620
CseI GACGC 3 cut(s) 569, 701, 1559
Csp6I GTAC 4 cut(s) 391, 538, 544, 1118
CviAII CATG 3 cut(s) 318, 1531, 1543
CviQI GTAC 4 cut(s) 391, 538, 544, 1118
DdeI CTNAG 6 cut(s) 430, 479, 1035, 1226, 1262, 1515
DpnI GATC 9 cut(s) 22, 114, 150, 467, 563, 652, 657, 818, 1025
DpnII GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
EaeI YGGCCR 3 cut(s) 842, 863, 883
EagI CGGCCG 3 cut(s) 842, 863, 883
Eam1104I CTCTTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 123
EclXI CGGCCG 3 cut(s) 842, 863, 883
Eco31I GGTCTC 1 cut(s) 1153
Eco47I GGWCC 2 cut(s) 14, 1402
Eco52I CGGCCG 3 cut(s) 842, 863, 883
Eco57I CTGAAG 2 cut(s) 261, 539
Eco88I CYCGRG 1 cut(s) 1370
EcoNI CCTNNNNNAGG 1 cut(s) 1574
EcoRI GAATTC 1 cut(s) 1437
EcoRII CCWGG 2 cut(s) 461, 826
EcoT22I ATGCAT 1 cut(s) 496
Esp3I CGTCTC 1 cut(s) 587
FaeI CATG 3 cut(s) 321, 1534, 1546
FalI AAGNNNNNCTT 4 cut(s) 245, 277, 1343, 1375
FaqI GGGAC 2 cut(s) 889, 1349
FatI CATG 3 cut(s) 317, 1530, 1542
FauI CCCGC 1 cut(s) 921
FbaI TGATCA 1 cut(s) 148
FokI GGATG 4 cut(s) 317, 966, 1348, 1436
FspBI CTAG 3 cut(s) 194, 213, 1461
GlaI GCGC 7 cut(s) 98, 613, 669, 1188, 1384, 1415, 1554
GsuI CTGGAG 2 cut(s) 356, 810
HaeIII GGCC 4 cut(s) 779, 844, 865, 885
HgaI GACGC 3 cut(s) 569, 701, 1559
HhaI GCGC 7 cut(s) 99, 614, 670, 1189, 1385, 1416, 1555
Hin1II CATG 3 cut(s) 321, 1534, 1546
Hin6I GCGC 7 cut(s) 97, 612, 668, 1187, 1383, 1414, 1553
HinP1I GCGC 7 cut(s) 97, 612, 668, 1187, 1383, 1414, 1553
HincII GTYRAC 6 cut(s) 136, 223, 1031, 1041, 1051, 1063
HindII GTYRAC 6 cut(s) 136, 223, 1031, 1041, 1051, 1063
HindIII AAGCTT 1 cut(s) 1198
HinfI GANTC 8 cut(s) 172, 414, 732, 751, 831, 1037, 1214, 1634
HphI GGTGA 4 cut(s) 38, 451, 497, 592
Hpy166II GTNNAC 7 cut(s) 72, 136, 223, 1031, 1041, 1051, 1063
Hpy188I TCNGA 8 cut(s) 655, 660, 750, 762, 1265, 1303, 1406, 1467
Hpy8I GTNNAC 7 cut(s) 72, 136, 223, 1031, 1041, 1051, 1063
Hpy99I CGWCG 4 cut(s) 50, 717, 740, 1133
HpyAV CCTTC 2 cut(s) 673, 790
HpyCH4III ACNGT 6 cut(s) 390, 398, 686, 1096, 1117, 1176
HpyCH4IV ACGT 5 cut(s) 45, 962, 1015, 1470, 1626
HpyCH4V TGCA 6 cut(s) 32, 251, 324, 494, 505, 1109
HpyF10VI GCNNNNNNNGC 9 cut(s) 38, 103, 965, 1000, 1009, 1018, 1296, 1502, 1511
HpyF3I CTNAG 6 cut(s) 430, 479, 1035, 1226, 1262, 1515
HpySE526I ACGT 5 cut(s) 45, 962, 1015, 1470, 1626
Hsp92II CATG 3 cut(s) 321, 1534, 1546
HspAI GCGC 7 cut(s) 97, 612, 668, 1187, 1383, 1414, 1553
Kpn2I TCCGGA 1 cut(s) 529
KroI GCCGGC 1 cut(s) 1071
KroNI GCCGGC 1 cut(s) 1073
Ksp22I TGATCA 1 cut(s) 148
Kzo9I GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
LmnI GCTCC 4 cut(s) 64, 1204, 1304, 1560
Lsp1109I GCAGC 6 cut(s) 90, 154, 308, 949, 1121, 1624
LweI GCATC 8 cut(s) 19, 206, 295, 296, 481, 626, 754, 988
MaeI CTAG 3 cut(s) 194, 213, 1461
MaeII ACGT 5 cut(s) 45, 962, 1015, 1470, 1626
MaeIII GTNAC 6 cut(s) 280, 292, 398, 1096, 1340, 1631
MalI GATC 9 cut(s) 22, 114, 150, 467, 563, 652, 657, 818, 1025
MboI GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
MboII GAAGA 4 cut(s) 28, 140, 826, 1592
MflI RGATCY 2 cut(s) 465, 816
MhlI GDGCHC 1 cut(s) 1476
MluCI AATT 8 cut(s) 246, 298, 952, 1233, 1240, 1267, 1437, 1524
MluI ACGCGT 1 cut(s) 52
MlyI GAGTC 5 cut(s) 423, 840, 1046, 1223, 1628
Mph1103I ATGCAT 1 cut(s) 496
MreI CGCCGGCG 1 cut(s) 1071
MroI TCCGGA 1 cut(s) 529
MroNI GCCGGC 1 cut(s) 1071
MseI TTAA 5 cut(s) 407, 510, 1152, 1271, 1425
MslI CAYNNNNRTG 1 cut(s) 1545
MspA1I CMGCKG 2 cut(s) 103, 239
MspCI CTTAAG 2 cut(s) 406, 1424
MspR9I CCNGG 4 cut(s) 463, 470, 703, 828
Mva1269I GAATGC 2 cut(s) 64, 494
MvaI CCWGG 2 cut(s) 463, 828
MvnI CGCG 4 cut(s) 54, 614, 1187, 1553
MwoI GCNNNNNNNGC 9 cut(s) 38, 103, 965, 1000, 1009, 1018, 1296, 1502, 1511
NaeI GCCGGC 1 cut(s) 1073
NciI CCSGG 2 cut(s) 470, 703
NdeII GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
NgoMIV GCCGGC 1 cut(s) 1071
NlaIII CATG 3 cut(s) 321, 1534, 1546
NlaIV GGNNCC 5 cut(s) 16, 88, 427, 467, 1403
NmeAIII GCCGAG 3 cut(s) 672, 950, 958
NmuCI GTSAC 2 cut(s) 280, 1631
NsiI ATGCAT 1 cut(s) 496
NspI RCATGY 1 cut(s) 321
NspV TTCGAA 1 cut(s) 1500
PaeR7I CTCGAG 1 cut(s) 1370
PagI TCATGA 1 cut(s) 1530
PcsI WCGNNNNNNNCGW 3 cut(s) 45, 51, 766
PctI GAATGC 2 cut(s) 64, 494
PdiI GCCGGC 1 cut(s) 1073
PfeI GAWTC 3 cut(s) 172, 732, 751
PfoI TCCNGGA 2 cut(s) 468, 826
PleI GAGTC 5 cut(s) 422, 839, 1045, 1222, 1628
PpsI GAGTC 5 cut(s) 422, 839, 1045, 1222, 1628
Psp1406I AACGTT 1 cut(s) 1626
Psp6I CCWGG 2 cut(s) 461, 826
PspGI CCWGG 2 cut(s) 461, 826
PspN4I GGNNCC 5 cut(s) 16, 88, 427, 467, 1403
PspPI GGNCC 2 cut(s) 14, 1402
PstI CTGCAG 2 cut(s) 326, 1111
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 2 cut(s) 465, 816
PvuII CAGCTG 2 cut(s) 103, 239
RsaI GTAC 4 cut(s) 392, 539, 545, 1119
RsaNI GTAC 4 cut(s) 391, 538, 544, 1118
RseI CAYNNNNRTG 1 cut(s) 1545
SaqAI TTAA 5 cut(s) 407, 510, 1152, 1271, 1425
Sau3AI GATC 9 cut(s) 20, 112, 148, 465, 561, 650, 655, 816, 1023
Sau96I GGNCC 2 cut(s) 14, 1402
ScaI AGTACT 1 cut(s) 1119
SchI GAGTC 5 cut(s) 423, 840, 1046, 1223, 1628
ScrFI CCNGG 4 cut(s) 463, 470, 703, 828
SduI GDGCHC 1 cut(s) 1476
SfaNI GCATC 8 cut(s) 19, 206, 295, 296, 481, 626, 754, 988
SfcI CTRYAG 4 cut(s) 322, 1092, 1107, 1113
Sfr274I CTCGAG 1 cut(s) 1370
SfuI TTCGAA 1 cut(s) 1500
SgrAI CRCCGGYG 1 cut(s) 1071
SinI GGWCC 2 cut(s) 14, 1402
SlaI CTCGAG 1 cut(s) 1370
SmiMI CAYNNNNRTG 1 cut(s) 1545
SmlI CTYRAG 5 cut(s) 116, 406, 1370, 1424, 1607
SmoI CTYRAG 5 cut(s) 116, 406, 1370, 1424, 1607
Sse9I AATT 8 cut(s) 246, 298, 952, 1233, 1240, 1267, 1437, 1524
SsiI CCGC 9 cut(s) 62, 614, 800, 845, 886, 914, 917, 930, 1069
SspI AATATT 1 cut(s) 166
SspMI CTAG 3 cut(s) 194, 213, 1461
StyD4I CCNGG 4 cut(s) 461, 468, 701, 826
TaaI ACNGT 6 cut(s) 390, 398, 686, 1096, 1117, 1176
TaiI ACGT 5 cut(s) 48, 965, 1018, 1473, 1629
TaqII GACCGA 1 cut(s) 1016
TasI AATT 8 cut(s) 246, 298, 952, 1233, 1240, 1267, 1437, 1524
TatI WGTACW 2 cut(s) 390, 1117
TauI GCSGC 5 cut(s) 617, 847, 888, 919, 932
TfiI GAWTC 3 cut(s) 172, 732, 751
Tru1I TTAA 5 cut(s) 407, 510, 1152, 1271, 1425
Tru9I TTAA 5 cut(s) 407, 510, 1152, 1271, 1425
TscAI CASTG 1 cut(s) 115
TseFI GTSAC 2 cut(s) 280, 1631
TseI GCWGC 6 cut(s) 103, 142, 321, 937, 1109, 1612
Tsp45I GTSAC 2 cut(s) 280, 1631
TspDTI ATGAA 4 cut(s) 461, 570, 1559, 1578
TspRI CASTG 1 cut(s) 115
Vha464I CTTAAG 2 cut(s) 406, 1424
VpaK11BI GGWCC 2 cut(s) 14, 1402
XagI CCTNNNNNAGG 1 cut(s) 1574
XapI RAATTY 3 cut(s) 1233, 1267, 1437
XbaI TCTAGA 1 cut(s) 212
XceI RCATGY 1 cut(s) 321
XcmI CCANNNNNNNNNTGG 1 cut(s) 1593
XhoI CTCGAG 1 cut(s) 1370
XspI CTAG 3 cut(s) 194, 213, 1461
ZrmI AGTACT 1 cut(s) 1119
Zsp2I ATGCAT 1 cut(s) 496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.