Penicillin-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD08G1168300.v1.1 |
| pyrus_communis | pycom08g14380 |
| rosa_multiflora | Rmu_sc0007232.1_g000006 |
| rosa_roxburghii | Rroxscaffold_171G00441450 Rroxscaffold_7G00172600 Rroxscaffold_7G00172620 |
| rosa_samantha | Rh6AG362900 Rh6CG377400 Rh6CG377600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 565 |
| AccII | CGCG | 1 cut(s) | 525 |
| AciI | CCGC | 3 cut(s) | 182, 523, 543 |
| AcvI | CACGTG | 1 cut(s) | 448 |
| AcyI | GRCGYC | 2 cut(s) | 246, 356 |
| AfaI | GTAC | 1 cut(s) | 579 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 529 |
| AflIII | ACRYGT | 2 cut(s) | 445, 447 |
| AgsI | TTSAA | 1 cut(s) | 105 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 140, 172 |
| AleI | CACNNNNGTG | 1 cut(s) | 448 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 215, 247, 325, 357, 467, 499 |
| Alw26I | GTCTC | 1 cut(s) | 538 |
| ApeKI | GCWGC | 1 cut(s) | 558 |
| AspLEI | GCGC | 1 cut(s) | 527 |
| AsuHPI | GGTGA | 3 cut(s) | 4, 59, 559 |
| BbrPI | CACGTG | 1 cut(s) | 448 |
| BbvI | GCAGC | 1 cut(s) | 570 |
| BccI | CCATC | 1 cut(s) | 27 |
| BclI | TGATCA | 2 cut(s) | 9, 54 |
| BcoDI | GTCTC | 1 cut(s) | 538 |
| BfuAI | ACCTGC | 1 cut(s) | 565 |
| BisI | GCNGC | 1 cut(s) | 559 |
| BlsI | GCNGC | 1 cut(s) | 560 |
| BmrI | ACTGGG | 3 cut(s) | 43, 65, 503 |
| BmuI | ACTGGG | 3 cut(s) | 43, 65, 503 |
| BsaAI | YACGTR | 1 cut(s) | 448 |
| BsaHI | GRCGYC | 2 cut(s) | 246, 356 |
| BsaI | GGTCTC | 1 cut(s) | 538 |
| BsaJI | CCNNGG | 1 cut(s) | 547 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 144, 174, 215, 245, 325, 355 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 529 |
| Bse118I | RCCGGY | 2 cut(s) | 271, 381 |
| Bse1I | ACTGG | 5 cut(s) | 49, 63, 71, 509, 534 |
| BseDI | CCNNGG | 1 cut(s) | 547 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 529 |
| BseNI | ACTGG | 5 cut(s) | 49, 63, 71, 509, 534 |
| BseRI | GAGGAG | 4 cut(s) | 220, 223, 330, 333 |
| BseXI | GCAGC | 1 cut(s) | 570 |
| BseYI | CCCAGC | 1 cut(s) | 570 |
| Bsh1236I | CGCG | 1 cut(s) | 525 |
| BsiSI | CCGG | 4 cut(s) | 243, 272, 353, 382 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 529 |
| BsmAI | GTCTC | 1 cut(s) | 538 |
| Bso31I | GGTCTC | 1 cut(s) | 538 |
| Bsp143I | GATC | 2 cut(s) | 9, 54 |
| BspACI | CCGC | 3 cut(s) | 182, 523, 543 |
| BspFNI | CGCG | 1 cut(s) | 525 |
| BspMI | ACCTGC | 1 cut(s) | 565 |
| BspTNI | GGTCTC | 1 cut(s) | 538 |
| BsrFI | RCCGGY | 2 cut(s) | 271, 381 |
| BsrI | ACTGG | 5 cut(s) | 49, 63, 71, 509, 534 |
| BssAI | RCCGGY | 2 cut(s) | 271, 381 |
| BssECI | CCNNGG | 1 cut(s) | 547 |
| BssMI | GATC | 2 cut(s) | 9, 54 |
| BssNI | GRCGYC | 2 cut(s) | 246, 356 |
| BssT1I | CCWWGG | 1 cut(s) | 547 |
| Bst4CI | ACNGT | 1 cut(s) | 582 |
| BstACI | GRCGYC | 2 cut(s) | 246, 356 |
| BstBAI | YACGTR | 1 cut(s) | 448 |
| BstC8I | GCNNGC | 3 cut(s) | 456, 519, 523 |
| BstFNI | CGCG | 1 cut(s) | 525 |
| BstHHI | GCGC | 1 cut(s) | 527 |
| BstKTI | GATC | 2 cut(s) | 12, 57 |
| BstMAI | GTCTC | 1 cut(s) | 538 |
| BstMBI | GATC | 2 cut(s) | 9, 54 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 303, 413, 464 |
| BstUI | CGCG | 1 cut(s) | 525 |
| BstV1I | GCAGC | 1 cut(s) | 570 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 450 |
| BtsIMutI | CAGTG | 1 cut(s) | 527 |
| BveI | ACCTGC | 1 cut(s) | 565 |
| Cac8I | GCNNGC | 3 cut(s) | 456, 519, 523 |
| CfoI | GCGC | 1 cut(s) | 527 |
| Cfr10I | RCCGGY | 2 cut(s) | 271, 381 |
| CseI | GACGC | 2 cut(s) | 235, 345 |
| Csp6I | GTAC | 1 cut(s) | 578 |
| CviJI | RGCY | 6 cut(s) | 306, 416, 422, 458, 492, 517 |
| CviKI_1 | RGCY | 6 cut(s) | 306, 416, 422, 458, 492, 517 |
| CviQI | GTAC | 1 cut(s) | 578 |
| DpnI | GATC | 2 cut(s) | 11, 56 |
| DpnII | GATC | 2 cut(s) | 9, 54 |
| EciI | GGCGGA | 1 cut(s) | 532 |
| Eco130I | CCWWGG | 1 cut(s) | 547 |
| Eco31I | GGTCTC | 1 cut(s) | 538 |
| Eco72I | CACGTG | 1 cut(s) | 448 |
| EcoT14I | CCWWGG | 1 cut(s) | 547 |
| ErhI | CCWWGG | 1 cut(s) | 547 |
| FaiI | YATR | 1 cut(s) | 471 |
| FauI | CCCGC | 2 cut(s) | 189, 530 |
| FbaI | TGATCA | 2 cut(s) | 9, 54 |
| Fnu4HI | GCNGC | 1 cut(s) | 559 |
| Fsp4HI | GCNGC | 1 cut(s) | 559 |
| GlaI | GCGC | 1 cut(s) | 526 |
| GluI | GCNGC | 1 cut(s) | 559 |
| GsaI | CCCAGC | 1 cut(s) | 574 |
| HapII | CCGG | 4 cut(s) | 243, 272, 353, 382 |
| HgaI | GACGC | 2 cut(s) | 235, 345 |
| HhaI | GCGC | 1 cut(s) | 527 |
| Hin1I | GRCGYC | 2 cut(s) | 246, 356 |
| Hin6I | GCGC | 1 cut(s) | 525 |
| HinP1I | GCGC | 1 cut(s) | 525 |
| HinfI | GANTC | 1 cut(s) | 165 |
| HpaII | CCGG | 4 cut(s) | 243, 272, 353, 382 |
| HphI | GGTGA | 3 cut(s) | 4, 59, 559 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 1 cut(s) | 164 |
| Hpy188III | TCNNGA | 2 cut(s) | 220, 330 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| Hpy99I | CGWCG | 2 cut(s) | 291, 401 |
| HpyAV | CCTTC | 1 cut(s) | 474 |
| HpyCH4III | ACNGT | 1 cut(s) | 582 |
| HpyCH4IV | ACGT | 1 cut(s) | 447 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 303, 413, 464 |
| HpySE526I | ACGT | 1 cut(s) | 447 |
| Hsp92I | GRCGYC | 2 cut(s) | 246, 356 |
| HspAI | GCGC | 1 cut(s) | 525 |
| Ksp22I | TGATCA | 2 cut(s) | 9, 54 |
| Kzo9I | GATC | 2 cut(s) | 9, 54 |
| LmnI | GCTCC | 2 cut(s) | 302, 412 |
| Lsp1109I | GCAGC | 1 cut(s) | 570 |
| MaeII | ACGT | 1 cut(s) | 447 |
| MaeIII | GTNAC | 1 cut(s) | 65 |
| MalI | GATC | 2 cut(s) | 11, 56 |
| MboI | GATC | 2 cut(s) | 9, 54 |
| MluCI | AATT | 2 cut(s) | 58, 105 |
| MlyI | GAGTC | 1 cut(s) | 174 |
| MmeI | TCCRAC | 1 cut(s) | 171 |
| MslI | CAYNNNNRTG | 1 cut(s) | 448 |
| MspI | CCGG | 4 cut(s) | 243, 272, 353, 382 |
| MvnI | CGCG | 1 cut(s) | 525 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 303, 413, 464 |
| NdeII | GATC | 2 cut(s) | 9, 54 |
| NmuCI | GTSAC | 1 cut(s) | 65 |
| OliI | CACNNNNGTG | 1 cut(s) | 448 |
| PkrI | GCNGC | 1 cut(s) | 560 |
| PleI | GAGTC | 1 cut(s) | 173 |
| PmaCI | CACGTG | 1 cut(s) | 448 |
| PmlI | CACGTG | 1 cut(s) | 448 |
| PpsI | GAGTC | 1 cut(s) | 173 |
| Ppu21I | YACGTR | 1 cut(s) | 448 |
| PspCI | CACGTG | 1 cut(s) | 448 |
| PspFI | CCCAGC | 1 cut(s) | 570 |
| RsaI | GTAC | 1 cut(s) | 579 |
| RsaNI | GTAC | 1 cut(s) | 578 |
| RseI | CAYNNNNRTG | 1 cut(s) | 448 |
| SatI | GCNGC | 1 cut(s) | 559 |
| Sau3AI | GATC | 2 cut(s) | 9, 54 |
| SchI | GAGTC | 1 cut(s) | 174 |
| SetI | ASST | 5 cut(s) | 327, 437, 450, 485, 579 |
| SgrAI | CRCCGGYG | 2 cut(s) | 271, 381 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 448 |
| Sse9I | AATT | 2 cut(s) | 58, 105 |
| SsiI | CCGC | 3 cut(s) | 182, 523, 543 |
| StyI | CCWWGG | 1 cut(s) | 547 |
| TaaI | ACNGT | 1 cut(s) | 582 |
| TaiI | ACGT | 1 cut(s) | 450 |
| TasI | AATT | 2 cut(s) | 58, 105 |
| TscAI | CASTG | 1 cut(s) | 534 |
| TseFI | GTSAC | 1 cut(s) | 65 |
| TseI | GCWGC | 1 cut(s) | 558 |
| Tsp45I | GTSAC | 1 cut(s) | 65 |
| TspRI | CASTG | 1 cut(s) | 534 |