Rmu_sc0010235.1_g000006
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010235.1
Physical Location & Seq
Forward (+)
30821 .. 31496
676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010235.1_g000006.1.cds

Sequence Viewer

Length: 396 bp
atgatggattcctcttctggtaaccacaaaactgaaaagggaggaaccttgacttcaagttttcctgctaatggggatatgtttggacgagttgtaaatggtactggtgagactgaaggcaagcggctagcgtttttagtggagtggttaaatagtttacttcctgatttaggtttaccagaaactgcttcatatgaggacttgagatcaggatctatgaagactgttatagattgtcttttaacacttagaacacgacttgggtcaagtgttgcagcagaaggtttttctctatttagtccaactggtaactatgacagccctcaaagggatttatcttcccgtggatttagttctccattaactgtagaagagaggcagaaggtctttgtatga

Protein Analysis

131

Amino Acids

14.14

Weight (kDa)

5.13

Isoelectric Point (pI)

54.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018965)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 124
AclWI GGATC 1 cut(s) 220
AcuI CTGAAG 1 cut(s) 135
AfaI GTAC 1 cut(s) 103
AfiI CCNNNNNNNGG 3 cut(s) 71, 170, 328
AgsI TTSAA 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 104
AlwI GGATC 1 cut(s) 220
AlwNI CAGNNNCTG 1 cut(s) 185
ApeKI GCWGC 1 cut(s) 275
AsuHPI GGTGA 1 cut(s) 119
AsuNHI GCTAGC 1 cut(s) 127
BbsI GAAGAC 1 cut(s) 227
BbvI GCAGC 1 cut(s) 287
BcoDI GTCTC 1 cut(s) 104
BfaI CTAG 1 cut(s) 128
BfmI CTRYAG 1 cut(s) 366
BisI GCNGC 2 cut(s) 125, 276
BlsI GCNGC 2 cut(s) 126, 277
BmiI GGNNCC 1 cut(s) 46
BmtI GCTAGC 1 cut(s) 131
BoxI GACNNNNGTC 1 cut(s) 262
BpiI GAAGAC 1 cut(s) 227
BpuEI CTTGAG 1 cut(s) 223
BsaBI GATNNNNATC 1 cut(s) 211
BsaJI CCNNGG 1 cut(s) 343
Bsc4I CCNNNNNNNGG 3 cut(s) 71, 170, 328
Bse1I ACTGG 2 cut(s) 109, 310
Bse8I GATNNNNATC 1 cut(s) 211
BseDI CCNNGG 1 cut(s) 343
BseJI GATNNNNATC 1 cut(s) 211
BseLI CCNNNNNNNGG 3 cut(s) 71, 170, 328
BseNI ACTGG 2 cut(s) 109, 310
BseXI GCAGC 1 cut(s) 287
BslI CCNNNNNNNGG 3 cut(s) 71, 170, 328
BsmAI GTCTC 1 cut(s) 104
Bsp143I GATC 2 cut(s) 206, 212
BspACI CCGC 1 cut(s) 124
BspLI GGNNCC 1 cut(s) 46
BspOI GCTAGC 1 cut(s) 131
BspPI GGATC 1 cut(s) 220
BsrI ACTGG 2 cut(s) 109, 310
BssECI CCNNGG 1 cut(s) 343
BssMI GATC 2 cut(s) 206, 212
Bst4CI ACNGT 2 cut(s) 226, 367
Bst6I CTCTTC 2 cut(s) 19, 366
BstC8I GCNNGC 2 cut(s) 122, 129
BstDEI CTNAG 1 cut(s) 248
BstDSI CCRYGG 1 cut(s) 343
BstEII GGTNACC 1 cut(s) 20
BstENI CCTNNNNNAGG 1 cut(s) 168
BstKTI GATC 2 cut(s) 209, 215
BstMAI GTCTC 1 cut(s) 104
BstMBI GATC 2 cut(s) 206, 212
BstPAI GACNNNNGTC 1 cut(s) 262
BstPI GGTNACC 1 cut(s) 20
BstSFI CTRYAG 1 cut(s) 366
BstV1I GCAGC 1 cut(s) 287
BstV2I GAAGAC 1 cut(s) 227
BstX2I RGATCY 1 cut(s) 212
BstYI RGATCY 1 cut(s) 212
BtgI CCRYGG 1 cut(s) 343
Cac8I GCNNGC 2 cut(s) 122, 129
CaiI CAGNNNCTG 1 cut(s) 185
Csp6I GTAC 1 cut(s) 102
CviJI RGCY 2 cut(s) 127, 321
CviKI_1 RGCY 2 cut(s) 127, 321
CviQI GTAC 1 cut(s) 102
DdeI CTNAG 1 cut(s) 248
DpnI GATC 2 cut(s) 208, 214
DpnII GATC 2 cut(s) 206, 212
Eam1104I CTCTTC 2 cut(s) 19, 366
EarI CTCTTC 2 cut(s) 19, 366
Eco57I CTGAAG 1 cut(s) 135
Eco91I GGTNACC 1 cut(s) 20
EcoNI CCTNNNNNAGG 1 cut(s) 168
EcoO65I GGTNACC 1 cut(s) 20
FaiI YATR 7 cut(s) 80, 193, 195, 218, 230, 315, 394
FauNDI CATATG 1 cut(s) 193
Fnu4HI GCNGC 2 cut(s) 125, 276
Fsp4HI GCNGC 2 cut(s) 125, 276
FspBI CTAG 1 cut(s) 128
GluI GCNGC 2 cut(s) 125, 276
HinfI GANTC 1 cut(s) 8
HphI GGTGA 1 cut(s) 119
Hpy166II GTNNAC 2 cut(s) 158, 176
Hpy188III TCNNGA 2 cut(s) 164, 210
Hpy8I GTNNAC 2 cut(s) 158, 176
HpyAV CCTTC 3 cut(s) 110, 275, 376
HpyCH4III ACNGT 2 cut(s) 226, 367
HpyCH4V TGCA 1 cut(s) 275
HpyF3I CTNAG 1 cut(s) 248
Kzo9I GATC 2 cut(s) 206, 212
LpnPI CCDG 7 cut(s) 3, 78, 90, 177, 192, 195, 291
Lsp1109I GCAGC 1 cut(s) 287
MaeI CTAG 1 cut(s) 128
MaeIII GTNAC 2 cut(s) 20, 308
MalI GATC 2 cut(s) 208, 214
MboI GATC 2 cut(s) 206, 212
MboII GAAGA 4 cut(s) 6, 232, 330, 383
MflI RGATCY 1 cut(s) 212
MmeI TCCRAC 1 cut(s) 326
MnlI CCTC 5 cut(s) 22, 35, 190, 333, 369
MseI TTAA 3 cut(s) 149, 242, 362
NdeI CATATG 1 cut(s) 193
NdeII GATC 2 cut(s) 206, 212
NheI GCTAGC 1 cut(s) 127
NlaIV GGNNCC 1 cut(s) 46
PfeI GAWTC 1 cut(s) 8
PkrI GCNGC 2 cut(s) 126, 277
PshAI GACNNNNGTC 1 cut(s) 262
PspEI GGTNACC 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 46
PstNI CAGNNNCTG 1 cut(s) 185
PsuI RGATCY 1 cut(s) 212
RsaI GTAC 1 cut(s) 103
RsaNI GTAC 1 cut(s) 102
SaqAI TTAA 3 cut(s) 149, 242, 362
SatI GCNGC 2 cut(s) 125, 276
Sau3AI GATC 2 cut(s) 206, 212
SetI ASST 4 cut(s) 50, 175, 286, 387
SfcI CTRYAG 1 cut(s) 366
SmlI CTYRAG 1 cut(s) 202
SmoI CTYRAG 1 cut(s) 202
SsiI CCGC 1 cut(s) 124
SspMI CTAG 1 cut(s) 128
TaaI ACNGT 2 cut(s) 226, 367
TauI GCSGC 1 cut(s) 127
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 3 cut(s) 149, 242, 362
Tru9I TTAA 3 cut(s) 149, 242, 362
TseI GCWGC 1 cut(s) 275
TspDTI ATGAA 2 cut(s) 180, 233
XagI CCTNNNNNAGG 1 cut(s) 168
XspI CTAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.