Rh1BG061400
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
9123343 .. 9123946
604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG061400.1

Sequence Viewer

Length: 432 bp
ATGATGGATTCCTCTTCTGGTAACCACAAAACTGAAAAGGGAGGAACCTCGACTTCAAGTGTTCCTGCTAATGGGGATATGTTTGGACGAGTTGTAAATGGTACTGGTGAGACTGAAGGCAAGCGGCTAGCGTTTTTAGTGGAGTGGTTAAATAGTTTACTTCCTGAGGACTTGAGATCAGTATTGATTGATGGTACCATTTTATGTAGGCTATTGAACAGGCTTAGACCTTGTTCTGTTGACGAGGGATCTATGAAGACTGTTATAGATTGTCTTTTAACACTTAGAACACGACTTGGGTCAAGTGTTGCAGCAGAAGGTTTTTCTCTGTTTAGTCCAACTGGTAACTATGACAGCCCTCGAAGAGATTTATCTTCCCGTGGATTTAGTTCTCCGTTAACTATAGAAGAGAGGCAGAAGGTTTTTGTCTGA

Protein Analysis

143

Amino Acids

15.55

Weight (kDa)

6.58

Isoelectric Point (pI)

57.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018965)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 194
AccB1I GGYRCC 1 cut(s) 194
AciI CCGC 1 cut(s) 124
AclWI GGATC 1 cut(s) 256
AcuI CTGAAG 1 cut(s) 135
AfaI GTAC 2 cut(s) 103, 196
AfiI CCNNNNNNNGG 1 cut(s) 71
AgsI TTSAA 2 cut(s) 57, 217
Alw26I GTCTC 1 cut(s) 104
AlwI GGATC 1 cut(s) 256
ApeKI GCWGC 1 cut(s) 311
Asp718I GGTACC 1 cut(s) 194
AsuHPI GGTGA 1 cut(s) 119
AsuNHI GCTAGC 1 cut(s) 127
AxyI CCTNAGG 1 cut(s) 165
BanI GGYRCC 1 cut(s) 194
BbsI GAAGAC 1 cut(s) 263
BbvI GCAGC 1 cut(s) 323
BccI CCATC 1 cut(s) 185
BcoDI GTCTC 1 cut(s) 104
BfaI CTAG 1 cut(s) 128
BfmI CTRYAG 1 cut(s) 402
BisI GCNGC 2 cut(s) 125, 312
BlsI GCNGC 2 cut(s) 126, 313
BmiI GGNNCC 2 cut(s) 46, 196
BmtI GCTAGC 1 cut(s) 131
BoxI GACNNNNGTC 1 cut(s) 298
BpiI GAAGAC 1 cut(s) 263
BpuEI CTTGAG 1 cut(s) 193
BsaJI CCNNGG 1 cut(s) 379
Bsc4I CCNNNNNNNGG 1 cut(s) 71
Bse1I ACTGG 2 cut(s) 109, 346
Bse21I CCTNAGG 1 cut(s) 165
BseDI CCNNGG 1 cut(s) 379
BseLI CCNNNNNNNGG 1 cut(s) 71
BseMII CTCAG 1 cut(s) 156
BseNI ACTGG 2 cut(s) 109, 346
BseXI GCAGC 1 cut(s) 323
BshNI GGYRCC 1 cut(s) 194
BslI CCNNNNNNNGG 1 cut(s) 71
BsmAI GTCTC 1 cut(s) 104
Bsp143I GATC 2 cut(s) 176, 248
BspACI CCGC 1 cut(s) 124
BspCNI CTCAG 1 cut(s) 157
BspLI GGNNCC 2 cut(s) 46, 196
BspOI GCTAGC 1 cut(s) 131
BspPI GGATC 1 cut(s) 256
BspT107I GGYRCC 1 cut(s) 194
BsrI ACTGG 2 cut(s) 109, 346
BssECI CCNNGG 1 cut(s) 379
BssMI GATC 2 cut(s) 176, 248
Bst4CI ACNGT 1 cut(s) 262
Bst6I CTCTTC 3 cut(s) 19, 358, 402
BstC8I GCNNGC 2 cut(s) 122, 129
BstDEI CTNAG 3 cut(s) 165, 224, 284
BstDSI CCRYGG 1 cut(s) 379
BstEII GGTNACC 1 cut(s) 20
BstKTI GATC 2 cut(s) 179, 251
BstMAI GTCTC 1 cut(s) 104
BstMBI GATC 2 cut(s) 176, 248
BstPAI GACNNNNGTC 1 cut(s) 298
BstPI GGTNACC 1 cut(s) 20
BstSFI CTRYAG 1 cut(s) 402
BstV1I GCAGC 1 cut(s) 323
BstV2I GAAGAC 1 cut(s) 263
BstX2I RGATCY 1 cut(s) 248
BstYI RGATCY 1 cut(s) 248
Bsu36I CCTNAGG 1 cut(s) 165
BtgI CCRYGG 1 cut(s) 379
Cac8I GCNNGC 2 cut(s) 122, 129
Csp6I GTAC 2 cut(s) 102, 195
CviJI RGCY 4 cut(s) 127, 211, 223, 357
CviKI_1 RGCY 4 cut(s) 127, 211, 223, 357
CviQI GTAC 2 cut(s) 102, 195
DdeI CTNAG 3 cut(s) 165, 224, 284
DpnI GATC 2 cut(s) 178, 250
DpnII GATC 2 cut(s) 176, 248
Eam1104I CTCTTC 3 cut(s) 19, 358, 402
EarI CTCTTC 3 cut(s) 19, 358, 402
Eco57I CTGAAG 1 cut(s) 135
Eco81I CCTNAGG 1 cut(s) 165
Eco91I GGTNACC 1 cut(s) 20
EcoO65I GGTNACC 1 cut(s) 20
FaiI YATR 6 cut(s) 80, 205, 254, 266, 351, 404
Fnu4HI GCNGC 2 cut(s) 125, 312
Fsp4HI GCNGC 2 cut(s) 125, 312
FspBI CTAG 1 cut(s) 128
GluI GCNGC 2 cut(s) 125, 312
HincII GTYRAC 2 cut(s) 241, 399
HindII GTYRAC 2 cut(s) 241, 399
HinfI GANTC 1 cut(s) 8
HpaI GTTAAC 1 cut(s) 399
HphI GGTGA 1 cut(s) 119
Hpy166II GTNNAC 3 cut(s) 158, 241, 399
Hpy188I TCNGA 1 cut(s) 431
Hpy188III TCNNGA 1 cut(s) 164
Hpy8I GTNNAC 3 cut(s) 158, 241, 399
HpyAV CCTTC 3 cut(s) 110, 311, 412
HpyCH4III ACNGT 1 cut(s) 262
HpyCH4V TGCA 1 cut(s) 311
HpyF3I CTNAG 3 cut(s) 165, 224, 284
KpnI GGTACC 1 cut(s) 198
KspAI GTTAAC 1 cut(s) 399
Kzo9I GATC 2 cut(s) 176, 248
LpnPI CCDG 6 cut(s) 3, 78, 90, 177, 205, 327
Lsp1109I GCAGC 1 cut(s) 323
MaeI CTAG 1 cut(s) 128
MaeIII GTNAC 2 cut(s) 20, 344
MalI GATC 2 cut(s) 178, 250
MboI GATC 2 cut(s) 176, 248
MboII GAAGA 5 cut(s) 6, 268, 366, 375, 419
MflI RGATCY 1 cut(s) 248
MmeI TCCRAC 1 cut(s) 362
MnlI CCTC 7 cut(s) 22, 35, 58, 160, 238, 369, 405
MseI TTAA 3 cut(s) 149, 278, 398
NdeII GATC 2 cut(s) 176, 248
NheI GCTAGC 1 cut(s) 127
NlaIV GGNNCC 2 cut(s) 46, 196
PfeI GAWTC 1 cut(s) 8
PkrI GCNGC 2 cut(s) 126, 313
PshAI GACNNNNGTC 1 cut(s) 298
PspEI GGTNACC 1 cut(s) 20
PspN4I GGNNCC 2 cut(s) 46, 196
PsuI RGATCY 1 cut(s) 248
RsaI GTAC 2 cut(s) 103, 196
RsaNI GTAC 2 cut(s) 102, 195
SaqAI TTAA 3 cut(s) 149, 278, 398
SatI GCNGC 2 cut(s) 125, 312
Sau3AI GATC 2 cut(s) 176, 248
SetI ASST 4 cut(s) 50, 232, 322, 423
SfcI CTRYAG 1 cut(s) 402
SmlI CTYRAG 1 cut(s) 172
SmoI CTYRAG 1 cut(s) 172
SsiI CCGC 1 cut(s) 124
SspMI CTAG 1 cut(s) 128
TaaI ACNGT 1 cut(s) 262
TaqI TCGA 2 cut(s) 50, 361
TauI GCSGC 1 cut(s) 127
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 3 cut(s) 149, 278, 398
Tru9I TTAA 3 cut(s) 149, 278, 398
TseI GCWGC 1 cut(s) 311
TspDTI ATGAA 1 cut(s) 269
TspGWI ACGGA 1 cut(s) 384
XspI CTAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.