Replication factor C subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g08091 |
| malus_domestica | MD02G1230000.v1.1 MD07G1082400.v1.1 |
| prunus_persica | Prupe.2G108000_v2.0.a1 |
| pyrus_communis | pycom07g06570 pycom07g06580 |
| rosa_chinensis | RchiOBHm_Chr1g0341191 |
| rosa_laevigata | RLG00000029069 |
| rosa_multiflora | Rmu_sc0004092.1_g000026 Rmu_sc0010892.1_g000010 |
| rosa_roxburghii | Rroxscaffold_4G00311790 |
| rosa_rugosa | Rorug01G0159600.1 |
| rosa_samantha | Rh1AG173900 Rh1BG141800 Rh1CG161700 Rh1DG173800 |
| rosa_wichuraiana | Rw1G014440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 209 |
| AcsI | RAATTY | 3 cut(s) | 242, 304, 476 |
| AcuI | CTGAAG | 1 cut(s) | 152 |
| AfaI | GTAC | 1 cut(s) | 190 |
| AgsI | TTSAA | 2 cut(s) | 216, 233 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 346, 378 |
| AluBI | AGCT | 4 cut(s) | 38, 73, 166, 202 |
| AluI | AGCT | 4 cut(s) | 38, 73, 166, 202 |
| Alw26I | GTCTC | 2 cut(s) | 60, 323 |
| AoxI | GGCC | 2 cut(s) | 171, 345 |
| ApeKI | GCWGC | 1 cut(s) | 48 |
| ApoI | RAATTY | 3 cut(s) | 242, 304, 476 |
| BbsI | GAAGAC | 1 cut(s) | 130 |
| BbvI | GCAGC | 1 cut(s) | 60 |
| BccI | CCATC | 2 cut(s) | 182, 396 |
| BceAI | ACGGC | 1 cut(s) | 28 |
| BcoDI | GTCTC | 2 cut(s) | 60, 323 |
| BisI | GCNGC | 2 cut(s) | 49, 209 |
| BlsI | GCNGC | 2 cut(s) | 50, 210 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BpiI | GAAGAC | 1 cut(s) | 130 |
| Bse1I | ACTGG | 1 cut(s) | 288 |
| BseGI | GGATG | 2 cut(s) | 407, 415 |
| BseNI | ACTGG | 1 cut(s) | 288 |
| BseXI | GCAGC | 1 cut(s) | 60 |
| BsgI | GTGCAG | 1 cut(s) | 67 |
| BshFI | GGCC | 2 cut(s) | 173, 347 |
| BsmAI | GTCTC | 2 cut(s) | 60, 323 |
| BsnI | GGCC | 2 cut(s) | 173, 347 |
| Bsp143I | GATC | 2 cut(s) | 382, 438 |
| BspACI | CCGC | 1 cut(s) | 209 |
| BspANI | GGCC | 2 cut(s) | 173, 347 |
| BspQI | GCTCTTC | 1 cut(s) | 438 |
| BsrI | ACTGG | 1 cut(s) | 288 |
| BssMI | GATC | 2 cut(s) | 382, 438 |
| Bst4CI | ACNGT | 3 cut(s) | 193, 317, 462 |
| Bst6I | CTCTTC | 1 cut(s) | 438 |
| BstF5I | GGATG | 2 cut(s) | 407, 415 |
| BstKTI | GATC | 2 cut(s) | 385, 441 |
| BstMAI | GTCTC | 2 cut(s) | 60, 323 |
| BstMBI | GATC | 2 cut(s) | 382, 438 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 208 |
| BstV1I | GCAGC | 1 cut(s) | 60 |
| BstV2I | GAAGAC | 1 cut(s) | 130 |
| BsuRI | GGCC | 2 cut(s) | 173, 347 |
| BtsCI | GGATG | 2 cut(s) | 407, 415 |
| Csp6I | GTAC | 1 cut(s) | 189 |
| CviQI | GTAC | 1 cut(s) | 189 |
| DpnI | GATC | 2 cut(s) | 384, 440 |
| DpnII | GATC | 2 cut(s) | 382, 438 |
| DraI | TTTAAA | 2 cut(s) | 240, 376 |
| Eam1104I | CTCTTC | 1 cut(s) | 438 |
| EarI | CTCTTC | 1 cut(s) | 438 |
| Eco57I | CTGAAG | 1 cut(s) | 152 |
| FaiI | YATR | 7 cut(s) | 23, 96, 120, 248, 266, 437, 465 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 125, 157 |
| Fnu4HI | GCNGC | 2 cut(s) | 49, 209 |
| FokI | GGATG | 2 cut(s) | 414, 422 |
| Fsp4HI | GCNGC | 2 cut(s) | 49, 209 |
| GluI | GCNGC | 2 cut(s) | 49, 209 |
| HaeIII | GGCC | 2 cut(s) | 173, 347 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| Hpy188I | TCNGA | 2 cut(s) | 154, 474 |
| Hpy188III | TCNNGA | 1 cut(s) | 178 |
| HpyAV | CCTTC | 2 cut(s) | 222, 254 |
| HpyCH4III | ACNGT | 3 cut(s) | 193, 317, 462 |
| HpyCH4V | TGCA | 2 cut(s) | 48, 419 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 208 |
| Kzo9I | GATC | 2 cut(s) | 382, 438 |
| LguI | GCTCTTC | 1 cut(s) | 438 |
| LpnPI | CCDG | 4 cut(s) | 155, 269, 311, 384 |
| Lsp1109I | GCAGC | 1 cut(s) | 60 |
| LweI | GCATC | 1 cut(s) | 73 |
| MalI | GATC | 2 cut(s) | 384, 440 |
| MboI | GATC | 2 cut(s) | 382, 438 |
| MboII | GAAGA | 4 cut(s) | 130, 133, 392, 455 |
| MluCI | AATT | 7 cut(s) | 183, 242, 304, 330, 390, 414, 476 |
| MnlI | CCTC | 2 cut(s) | 337, 400 |
| MseI | TTAA | 3 cut(s) | 99, 239, 375 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 208 |
| NdeII | GATC | 2 cut(s) | 382, 438 |
| NmeAIII | GCCGAG | 1 cut(s) | 89 |
| PciSI | GCTCTTC | 1 cut(s) | 438 |
| PkrI | GCNGC | 2 cut(s) | 50, 210 |
| RsaI | GTAC | 1 cut(s) | 190 |
| RsaNI | GTAC | 1 cut(s) | 189 |
| SapI | GCTCTTC | 1 cut(s) | 438 |
| SaqAI | TTAA | 3 cut(s) | 99, 239, 375 |
| SatI | GCNGC | 2 cut(s) | 49, 209 |
| Sau3AI | GATC | 2 cut(s) | 382, 438 |
| SetI | ASST | 8 cut(s) | 28, 40, 75, 119, 138, 168, 204, 296 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| Sse9I | AATT | 7 cut(s) | 183, 242, 304, 330, 390, 414, 476 |
| SsiI | CCGC | 1 cut(s) | 209 |
| TaaI | ACNGT | 3 cut(s) | 193, 317, 462 |
| TaqI | TCGA | 2 cut(s) | 342, 441 |
| TasI | AATT | 7 cut(s) | 183, 242, 304, 330, 390, 414, 476 |
| TatI | WGTACW | 1 cut(s) | 188 |
| TauI | GCSGC | 1 cut(s) | 211 |
| Tru1I | TTAA | 3 cut(s) | 99, 239, 375 |
| Tru9I | TTAA | 3 cut(s) | 99, 239, 375 |
| TseI | GCWGC | 1 cut(s) | 48 |
| TspDTI | ATGAA | 4 cut(s) | 17, 327, 426, 458 |
| TspGWI | ACGGA | 1 cut(s) | 311 |
| XapI | RAATTY | 3 cut(s) | 242, 304, 476 |