Rmu_sc0013028.1_g000007

Belongs to the pyruvate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013028.1
OG0015479
Physical Location & Seq
Forward (+)
30765 .. 34587
3823 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013028.1_g000007.1.cds

Sequence Viewer

Length: 1806 bp
atggctcaggtggtggctatgagagcgattcagagctcgatcctgtgccccgggtccggatccgcccagggacggagctccgataagctcaagcctccgagcttcgcttccagagttctggcgaatgaggagaagaagagcaccagccggaaagtggtcggcagcagaaggatgaggtctgagatcgccgccaaggggccgttacagaccgaggtcgttccgatgtcgcccgaggacttgcccaagataaaggagcaattccagcaattacagacgattcagcaatatgggaacacttcagtggggatgtggtcaaagccaacagtgagacgtaagaccaagattgtgtgcacaattggtccttccaccaacactcgcgaaatgatctggaagttggctgaggcggggatgaatgttgcgcggatgaatatgtcccatggagatcatgcgtctcatcagaaggttatcgacttggttaaggaatataatgagcaatccaaggacaatgtcattgcaatcatgcttgataccaagggccctgaggttaggagtggtgacctgccccagccaattaatttggcccctgggcaggaatttacttttacaattcagagaggggttggaacagcagagtgtgttagtgtgaactatgatgattttgttaatgatgtggaagtgggtgacatgcttctggttgatggtggtatgatgtcatttttggtgaagtccaagacagcagactcagtgaaatgtgaagttgtcgatggaggagaacttaagtctaggcggcacttgaatgtgcgagggaaaagtgcaacattggcttctatcactgagaaagattgggaagatatcaaatttggagtggataataaagttgacttctatgcagtttcgtttgttaaagatgcagaagttgttcatgaattgaagaattatctgcgaagctgtaatgcggatatacatgttattgtaaaaattgaaagtgcagactcgatcccaaatttgcattcgattatcacagcatctgatggggccatggttgcaagaggagatctaggtgcagaactccctgttgaagaggtcccacttctgcaggccatggttgcaagaggagatctaggtgcagaactccctgttgaagaggtcccacttctgcaggaagagataatcaggctatgccgtagcatggggaaggctgttattgttgcaacaaatatgcttgagagcatgattgttcacccaaccccaaccagagctgaggtatcagacattgccattgctgtccgggagggtgctgatgcagttatgctgtcgggagaaactgctaatggaaagtatccgctgaaagccgtgaaagttatgcacactgttgctctgcggacagaggcaaccgtcacaggtggccaaatgccggccaatcttggcaaagcttttaagaatcatatgagcgagatgtttgcttaccatgcaaccatgatgtccaatactcttggaacctcaatcgtcgtgttcactagatctggtttcatggctattctattgagccattttcgtccttctgggacaatatttgcttttacaaacgataagaggatacaacagagactggctctgtatgaaggtgtatgtcccatacacatggagtttgcagatgatgctgaaaaaagcttcactaatgccttggccgtactgcagaatcaaggaatggtaaaggcaggagaagaggttgcactcgttcagagtggcagacagcccatttggcggctccagtccactcacaatattcaagtgcgcaaagtctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000287 GO:0003006 GO:0003674 GO:0003824 GO:0004743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006629 GO:0006631 GO:0006633 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009987 GO:0010035 GO:0010038 GO:0010154 GO:0010431 GO:0016052 GO:0016053 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0021700 GO:0022414 GO:0030955 GO:0031420 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046686 GO:0046700 GO:0046872 GO:0046939 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00230 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04922 ko04930 ko05165 ko05203 ko05230 map00010 map00230 map00620 map01100 map01110 map01120 map01130 map01200 map01230 map04922 map04930 map05165 map05203 map05230
Pfam Domains
Protein Families
PK PK_C

Protein Analysis

601

Amino Acids

65.73

Weight (kDa)

6.94

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015479)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52920
fragaria_vesca FvH4_7g30750
malus_domestica MD01G1212800.v1.1 MD07G1282700.v1.1
prunus_persica Prupe.2G305000_v2.0.a1
pyrus_communis pycom01g22390 pycom07g25700
rosa_chinensis RchiOBHm_Chr1g0379701
rosa_laevigata RLG00000026366
rosa_multiflora Rmu_sc0013028.1_g000007
rosa_rugosa Rorug01G0414700
rosa_samantha Rh1AG438100 Rh1BG394600 Rh1CG407600 Rh1DG425000
rosa_wichuraiana Rw1G038180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1796
Acc36I ACCTGC 1 cut(s) 567
AccII CGCG 2 cut(s) 378, 421
AccIII TCCGGA 1 cut(s) 56
AciI CCGC 9 cut(s) 63, 189, 404, 421, 787, 956, 1343, 1381, 1765
AclWI GGATC 4 cut(s) 34, 54, 67, 991
AcoI YGGCCR 3 cut(s) 1405, 1416, 1686
AcsI RAATTY 3 cut(s) 593, 857, 1003
AcuI CTGAAG 1 cut(s) 282
AfaI GTAC 1 cut(s) 1692
AfiI CCNNNNNNNGG 8 cut(s) 56, 72, 154, 195, 589, 1189, 1414, 1764
AflII CTTAAG 1 cut(s) 776
AflIII ACRYGT 1 cut(s) 964
AgsI TTSAA 6 cut(s) 796, 931, 983, 1079, 1142, 1790
AjnI CCWGG 2 cut(s) 66, 583
AjuI GAANNNNNNNTTGG 2 cut(s) 994, 1026
AleI CACNNNNGTG 1 cut(s) 299
AluBI AGCT 8 cut(s) 36, 78, 88, 102, 948, 1259, 1433, 1671
AluI AGCT 8 cut(s) 36, 78, 88, 102, 948, 1259, 1433, 1671
Alw21I GWGCWC 4 cut(s) 38, 80, 143, 353
Alw26I GTCTC 3 cut(s) 322, 456, 1600
Alw44I GTGCAC 1 cut(s) 349
AlwI GGATC 4 cut(s) 34, 54, 67, 991
AlwNI CAGNNNCTG 2 cut(s) 1028, 1609
Ama87I CYCGRG 2 cut(s) 50, 230
Aor13HI TCCGGA 1 cut(s) 56
AoxI GGCC 8 cut(s) 197, 535, 579, 1035, 1098, 1405, 1416, 1686
ApaI GGGCCC 1 cut(s) 539
ApaLI GTGCAC 1 cut(s) 349
ApeKI GCWGC 1 cut(s) 162
ApoI RAATTY 3 cut(s) 593, 857, 1003
ArsI GACNNNNNNTTYG 2 cut(s) 1743, 1775
AseI ATTAAT 1 cut(s) 573
Asp700I GAANNNNTTC 1 cut(s) 918
AspLEI GCGC 2 cut(s) 421, 1797
AspS9I GGNCC 9 cut(s) 54, 197, 359, 535, 536, 580, 1035, 1084, 1147
AsuC2I CCSGG 3 cut(s) 51, 52, 1289
AsuHPI GGTGA 4 cut(s) 566, 692, 733, 1232
AvaI CYCGRG 2 cut(s) 50, 230
AvaII GGWCC 4 cut(s) 54, 359, 1084, 1147
AxyI CCTNAGG 1 cut(s) 540
BaeGI GKGCMC 3 cut(s) 50, 353, 539
BalI TGGCCA 1 cut(s) 1407
BamHI GGATCC 1 cut(s) 59
BanII GRGCYC 3 cut(s) 38, 80, 539
Bbv12I GWGCWC 4 cut(s) 38, 80, 143, 353
BbvCI CCTCAGC 2 cut(s) 399, 1260
BbvI GCAGC 1 cut(s) 174
BccI CCATC 3 cut(s) 692, 758, 1025
BceAI ACGGC 4 cut(s) 184, 1167, 1337, 1673
BcgI CGANNNNNNTGC 2 cut(s) 1442, 1476
BciT130I CCWGG 2 cut(s) 68, 585
BciVI GTATCC 2 cut(s) 1350, 1590
BcnI CCSGG 3 cut(s) 51, 52, 1289
BcoDI GTCTC 3 cut(s) 322, 456, 1600
BfaI CTAG 5 cut(s) 783, 1058, 1121, 1518, 1804
BfmI CTRYAG 3 cut(s) 1094, 1157, 1694
BfrI CTTAAG 1 cut(s) 776
BfuAI ACCTGC 1 cut(s) 567
BfuI GTATCC 2 cut(s) 1350, 1590
BglI GCCNNNNNGGC 1 cut(s) 1762
BglII AGATCT 3 cut(s) 1054, 1117, 1520
BisI GCNGC 4 cut(s) 163, 189, 788, 1766
BlsI GCNGC 4 cut(s) 164, 190, 789, 1767
Bme1390I CCNGG 5 cut(s) 51, 52, 68, 585, 1289
Bme18I GGWCC 4 cut(s) 54, 359, 1084, 1147
BmeT110I CYCGRG 2 cut(s) 50, 230
BmgT120I GGNCC 9 cut(s) 54, 197, 359, 535, 536, 580, 1035, 1084, 1147
BmrFI CCNGG 5 cut(s) 51, 52, 68, 585, 1289
BmsI GCATC 4 cut(s) 898, 1034, 1291, 1648
BoxI GACNNNNGTC 1 cut(s) 212
BplI GAGNNNNNCTC 2 cut(s) 1597, 1629
BpmI CTGGAG 1 cut(s) 1754
Bpu10I CCTNAGC 3 cut(s) 6, 399, 1260
BpuEI CTTGAG 2 cut(s) 74, 1244
BpuMI CCSGG 3 cut(s) 51, 52, 1289
BsaWI WCCGGW 1 cut(s) 56
BsaXI ACNNNNNCTCC 2 cut(s) 1713, 1743
Bsc4I CCNNNNNNNGG 8 cut(s) 56, 72, 154, 195, 589, 1189, 1414, 1764
Bse118I RCCGGY 1 cut(s) 1414
Bse1I ACTGG 2 cut(s) 1614, 1771
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 3 cut(s) 510, 1272, 1278
BseAI TCCGGA 1 cut(s) 56
BseBI CCWGG 2 cut(s) 68, 585
BseGI GGATG 4 cut(s) 177, 312, 414, 429
BseLI CCNNNNNNNGG 8 cut(s) 56, 72, 154, 195, 589, 1189, 1414, 1764
BseMI GCAATG 3 cut(s) 510, 1272, 1278
BseMII CTCAG 7 cut(s) 20, 171, 390, 531, 756, 825, 1251
BseNI ACTGG 2 cut(s) 1614, 1771
BseRI GAGGAG 4 cut(s) 143, 783, 1065, 1128
BseSI GKGCMC 3 cut(s) 50, 353, 539
BseXI GCAGC 1 cut(s) 174
BseYI CCCAGC 1 cut(s) 564
BsgI GTGCAG 3 cut(s) 1008, 1083, 1146
Bsh1236I CGCG 2 cut(s) 378, 421
BshFI GGCC 8 cut(s) 199, 537, 581, 1037, 1100, 1407, 1418, 1688
BsiHKAI GWGCWC 4 cut(s) 38, 80, 143, 353
BsiHKCI CYCGRG 2 cut(s) 50, 230
BsiSI CCGG 5 cut(s) 51, 57, 148, 1288, 1415
BslFI GGGAC 6 cut(s) 84, 418, 1070, 1133, 1579, 1617
BslI CCNNNNNNNGG 8 cut(s) 56, 72, 154, 195, 589, 1189, 1414, 1764
BsmAI GTCTC 3 cut(s) 322, 456, 1600
BsmBI CGTCTC 2 cut(s) 322, 456
BsmFI GGGAC 6 cut(s) 84, 418, 1070, 1133, 1579, 1617
BsmI GAATGC 1 cut(s) 1009
BsnI GGCC 8 cut(s) 199, 537, 581, 1037, 1100, 1407, 1418, 1688
BsoBI CYCGRG 2 cut(s) 50, 230
Bsp120I GGGCCC 1 cut(s) 535
Bsp1286I GDGCHC 6 cut(s) 38, 50, 80, 143, 353, 539
Bsp13I TCCGGA 1 cut(s) 56
Bsp143I GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
Bsp19I CCATGG 3 cut(s) 436, 1038, 1101
Bsp68I TCGCGA 1 cut(s) 378
BspACI CCGC 9 cut(s) 63, 189, 404, 421, 787, 956, 1343, 1381, 1765
BspANI GGCC 8 cut(s) 199, 537, 581, 1037, 1100, 1407, 1418, 1688
BspCNI CTCAG 7 cut(s) 19, 172, 391, 532, 755, 826, 1252
BspEI TCCGGA 1 cut(s) 56
BspFNI CGCG 2 cut(s) 378, 421
BspHI TCATGA 1 cut(s) 922
BspMAI CTGCAG 3 cut(s) 1098, 1161, 1698
BspMI ACCTGC 1 cut(s) 567
BspPI GGATC 4 cut(s) 34, 54, 67, 991
BspQI GCTCTTC 1 cut(s) 131
BspTI CTTAAG 1 cut(s) 776
BsrDI GCAATG 3 cut(s) 510, 1272, 1278
BsrFI RCCGGY 1 cut(s) 1414
BsrI ACTGG 2 cut(s) 1614, 1771
BssAI RCCGGY 1 cut(s) 1414
BssMI GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
BssT1I CCWWGG 7 cut(s) 192, 436, 498, 531, 1038, 1101, 1683
Bst2UI CCWGG 2 cut(s) 68, 585
Bst4CI ACNGT 3 cut(s) 325, 1372, 1396
Bst6I CTCTTC 5 cut(s) 131, 1074, 1137, 1158, 1719
BstAFI CTTAAG 1 cut(s) 776
BstAPI GCANNNNNTGC 1 cut(s) 1658
BstC8I GCNNGC 2 cut(s) 1098, 1416
BstDEI CTNAG 7 cut(s) 6, 180, 399, 540, 742, 834, 1260
BstDSI CCRYGG 3 cut(s) 436, 1038, 1101
BstEII GGTNACC 1 cut(s) 554
BstF5I GGATG 4 cut(s) 177, 312, 414, 429
BstFNI CGCG 2 cut(s) 378, 421
BstHHI GCGC 2 cut(s) 421, 1797
BstKTI GATC 9 cut(s) 42, 62, 186, 387, 445, 999, 1057, 1120, 1523
BstMAI GTCTC 3 cut(s) 322, 456, 1600
BstMBI GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
BstMWI GCNNNNNNNGC 8 cut(s) 23, 262, 821, 1043, 1106, 1469, 1658, 1762
BstNI CCWGG 2 cut(s) 68, 585
BstNSI RCATGY 2 cut(s) 688, 968
BstPAI GACNNNNGTC 1 cut(s) 212
BstPI GGTNACC 1 cut(s) 554
BstSCI CCNGG 5 cut(s) 49, 50, 66, 583, 1287
BstSFI CTRYAG 3 cut(s) 1094, 1157, 1694
BstSLI GKGCMC 3 cut(s) 50, 353, 539
BstUI CGCG 2 cut(s) 378, 421
BstV1I GCAGC 1 cut(s) 174
BstX2I RGATCY 4 cut(s) 59, 1054, 1117, 1520
BstXI CCANNNNNNTGG 2 cut(s) 118, 1642
BstYI RGATCY 4 cut(s) 59, 1054, 1117, 1520
Bsu36I CCTNAGG 1 cut(s) 540
BsuI GTATCC 2 cut(s) 1350, 1590
BsuRI GGCC 8 cut(s) 199, 537, 581, 1037, 1100, 1407, 1418, 1688
BtgI CCRYGG 3 cut(s) 436, 1038, 1101
BtsCI GGATG 4 cut(s) 177, 312, 414, 429
BtsIMutI CAGTG 5 cut(s) 306, 330, 750, 831, 1368
BtuMI TCGCGA 1 cut(s) 378
BveI ACCTGC 1 cut(s) 567
Cac8I GCNNGC 2 cut(s) 1098, 1416
CaiI CAGNNNCTG 2 cut(s) 1028, 1609
CciI TCATGA 1 cut(s) 922
CfoI GCGC 2 cut(s) 421, 1797
Cfr10I RCCGGY 1 cut(s) 1414
Cfr13I GGNCC 9 cut(s) 54, 197, 359, 535, 536, 580, 1035, 1084, 1147
Cfr9I CCCGGG 1 cut(s) 50
CseI GACGC 1 cut(s) 438
Csp6I GTAC 1 cut(s) 1691
CviQI GTAC 1 cut(s) 1691
DdeI CTNAG 7 cut(s) 6, 180, 399, 540, 742, 834, 1260
DpnI GATC 9 cut(s) 41, 61, 185, 386, 444, 998, 1056, 1119, 1522
DpnII GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
EaeI YGGCCR 3 cut(s) 1405, 1416, 1686
Eam1104I CTCTTC 5 cut(s) 131, 1074, 1137, 1158, 1719
EarI CTCTTC 5 cut(s) 131, 1074, 1137, 1158, 1719
EciI GGCGGA 1 cut(s) 52
Ecl136II GAGCTC 2 cut(s) 36, 78
Eco130I CCWWGG 7 cut(s) 192, 436, 498, 531, 1038, 1101, 1683
Eco24I GRGCYC 3 cut(s) 38, 80, 539
Eco32I GATATC 1 cut(s) 853
Eco47I GGWCC 4 cut(s) 54, 359, 1084, 1147
Eco53kI GAGCTC 2 cut(s) 36, 78
Eco57I CTGAAG 1 cut(s) 282
Eco81I CCTNAGG 1 cut(s) 540
Eco88I CYCGRG 2 cut(s) 50, 230
Eco91I GGTNACC 1 cut(s) 554
EcoICRI GAGCTC 2 cut(s) 36, 78
EcoO109I RGGNCCY 4 cut(s) 535, 536, 1084, 1147
EcoO65I GGTNACC 1 cut(s) 554
EcoRII CCWGG 2 cut(s) 66, 583
EcoRV GATATC 1 cut(s) 853
EcoT14I CCWWGG 7 cut(s) 192, 436, 498, 531, 1038, 1101, 1683
EcoT38I GRGCYC 3 cut(s) 38, 80, 539
ErhI CCWWGG 7 cut(s) 192, 436, 498, 531, 1038, 1101, 1683
Esp3I CGTCTC 2 cut(s) 322, 456
FaqI GGGAC 6 cut(s) 84, 418, 1070, 1133, 1579, 1617
FauI CCCGC 1 cut(s) 397
FauNDI CATATG 1 cut(s) 1446
Fnu4HI GCNGC 4 cut(s) 163, 189, 788, 1766
FokI GGATG 4 cut(s) 184, 319, 421, 436
FriOI GRGCYC 3 cut(s) 38, 80, 539
Fsp4HI GCNGC 4 cut(s) 163, 189, 788, 1766
FspBI CTAG 5 cut(s) 783, 1058, 1121, 1518, 1804
FspI TGCGCA 1 cut(s) 1796
GlaI GCGC 2 cut(s) 420, 1796
GluI GCNGC 4 cut(s) 163, 189, 788, 1766
GsaI CCCAGC 1 cut(s) 568
GsuI CTGGAG 1 cut(s) 1754
HaeIII GGCC 8 cut(s) 199, 537, 581, 1037, 1100, 1407, 1418, 1688
HapII CCGG 5 cut(s) 51, 57, 148, 1288, 1415
HgaI GACGC 1 cut(s) 438
HhaI GCGC 2 cut(s) 421, 1797
Hin6I GCGC 2 cut(s) 419, 1795
HinP1I GCGC 2 cut(s) 419, 1795
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HindIII AAGCTT 2 cut(s) 1431, 1669
HinfI GANTC 6 cut(s) 28, 277, 740, 992, 1441, 1699
HpaII CCGG 5 cut(s) 51, 57, 148, 1288, 1415
HphI GGTGA 4 cut(s) 566, 692, 733, 1232
Hpy166II GTNNAC 6 cut(s) 351, 646, 880, 1240, 1515, 1776
Hpy188III TCNNGA 6 cut(s) 57, 111, 377, 388, 923, 1317
Hpy8I GTNNAC 6 cut(s) 351, 646, 880, 1240, 1515, 1776
Hpy99I CGWCG 1 cut(s) 1511
HpyAV CCTTC 6 cut(s) 162, 372, 454, 1189, 1569, 1616
HpyCH4III ACNGT 3 cut(s) 325, 1372, 1396
HpyCH4IV ACGT 1 cut(s) 331
HpyF10VI GCNNNNNNNGC 8 cut(s) 23, 262, 821, 1043, 1106, 1469, 1658, 1762
HpyF3I CTNAG 7 cut(s) 6, 180, 399, 540, 742, 834, 1260
HpySE526I ACGT 1 cut(s) 331
HspAI GCGC 2 cut(s) 419, 1795
Kpn2I TCCGGA 1 cut(s) 56
KroI GCCGGC 1 cut(s) 1414
KroNI GCCGGC 1 cut(s) 1416
Kzo9I GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
LguI GCTCTTC 1 cut(s) 131
LmnI GCTCC 4 cut(s) 75, 83, 253, 1773
Lsp1109I GCAGC 1 cut(s) 174
LweI GCATC 4 cut(s) 898, 1034, 1291, 1648
MaeI CTAG 5 cut(s) 783, 1058, 1121, 1518, 1804
MaeII ACGT 1 cut(s) 331
MaeIII GTNAC 4 cut(s) 201, 554, 680, 1396
MalI GATC 9 cut(s) 41, 61, 185, 386, 444, 998, 1056, 1119, 1522
MboI GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
MboII GAAGA 8 cut(s) 145, 148, 860, 943, 1091, 1154, 1175, 1736
MfeI CAATTG 1 cut(s) 354
MflI RGATCY 4 cut(s) 59, 1054, 1117, 1520
MhlI GDGCHC 6 cut(s) 38, 50, 80, 143, 353, 539
MlsI TGGCCA 1 cut(s) 1407
MluNI TGGCCA 1 cut(s) 1407
MlyI GAGTC 2 cut(s) 734, 986
MmeI TCCRAC 1 cut(s) 601
Mox20I TGGCCA 1 cut(s) 1407
MroI TCCGGA 1 cut(s) 56
MroNI GCCGGC 1 cut(s) 1414
MroXI GAANNNNTTC 1 cut(s) 918
MscI TGGCCA 1 cut(s) 1407
MseI TTAA 6 cut(s) 477, 573, 663, 777, 903, 1437
MslI CAYNNNNRTG 3 cut(s) 299, 795, 1640
Msp20I TGGCCA 1 cut(s) 1407
MspA1I CMGCKG 1 cut(s) 1345
MspCI CTTAAG 1 cut(s) 776
MspI CCGG 5 cut(s) 51, 57, 148, 1288, 1415
MspR9I CCNGG 5 cut(s) 51, 52, 68, 585, 1289
MunI CAATTG 1 cut(s) 354
Mva1269I GAATGC 1 cut(s) 1009
MvaI CCWGG 2 cut(s) 68, 585
MvnI CGCG 2 cut(s) 378, 421
MwoI GCNNNNNNNGC 8 cut(s) 23, 262, 821, 1043, 1106, 1469, 1658, 1762
NaeI GCCGGC 1 cut(s) 1416
NciI CCSGG 3 cut(s) 51, 52, 1289
NcoI CCATGG 3 cut(s) 436, 1038, 1101
NdeI CATATG 1 cut(s) 1446
NdeII GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
NgoMIV GCCGGC 1 cut(s) 1414
NmuCI GTSAC 3 cut(s) 554, 680, 1396
NruI TCGCGA 1 cut(s) 378
NsbI TGCGCA 1 cut(s) 1796
NspI RCATGY 2 cut(s) 688, 968
OliI CACNNNNGTG 1 cut(s) 299
PagI TCATGA 1 cut(s) 922
PasI CCCWGGG 2 cut(s) 67, 584
PciI ACATGT 1 cut(s) 964
PciSI GCTCTTC 1 cut(s) 131
PctI GAATGC 1 cut(s) 1009
PdiI GCCGGC 1 cut(s) 1416
PdmI GAANNNNTTC 1 cut(s) 918
PfeI GAWTC 4 cut(s) 28, 277, 1441, 1699
PflFI GACNNNGTC 1 cut(s) 506
PfoI TCCNGGA 1 cut(s) 1287
PkrI GCNGC 4 cut(s) 164, 190, 789, 1767
PleI GAGTC 2 cut(s) 734, 986
PpsI GAGTC 2 cut(s) 734, 986
PpuMI RGGWCCY 2 cut(s) 1084, 1147
PscI ACATGT 1 cut(s) 964
PshAI GACNNNNGTC 1 cut(s) 212
PshBI ATTAAT 1 cut(s) 573
Psp124BI GAGCTC 2 cut(s) 38, 80
Psp5II RGGWCCY 2 cut(s) 1084, 1147
Psp6I CCWGG 2 cut(s) 66, 583
PspEI GGTNACC 1 cut(s) 554
PspFI CCCAGC 1 cut(s) 564
PspGI CCWGG 2 cut(s) 66, 583
PspOMI GGGCCC 1 cut(s) 535
PspPI GGNCC 9 cut(s) 54, 197, 359, 535, 536, 580, 1035, 1084, 1147
PspPPI RGGWCCY 2 cut(s) 1084, 1147
PstI CTGCAG 3 cut(s) 1098, 1161, 1698
PstNI CAGNNNCTG 2 cut(s) 1028, 1609
PsuI RGATCY 4 cut(s) 59, 1054, 1117, 1520
PsyI GACNNNGTC 1 cut(s) 506
RruI TCGCGA 1 cut(s) 378
RsaI GTAC 1 cut(s) 1692
RsaNI GTAC 1 cut(s) 1691
RseI CAYNNNNRTG 3 cut(s) 299, 795, 1640
SacI GAGCTC 2 cut(s) 38, 80
SapI GCTCTTC 1 cut(s) 131
SaqAI TTAA 6 cut(s) 477, 573, 663, 777, 903, 1437
SatI GCNGC 4 cut(s) 163, 189, 788, 1766
Sau3AI GATC 9 cut(s) 39, 59, 183, 384, 442, 996, 1054, 1117, 1520
Sau96I GGNCC 9 cut(s) 54, 197, 359, 535, 536, 580, 1035, 1084, 1147
SchI GAGTC 2 cut(s) 734, 986
ScrFI CCNGG 5 cut(s) 51, 52, 68, 585, 1289
SduI GDGCHC 6 cut(s) 38, 50, 80, 143, 353, 539
SfaNI GCATC 4 cut(s) 898, 1034, 1291, 1648
SfcI CTRYAG 3 cut(s) 1094, 1157, 1694
SinI GGWCC 4 cut(s) 54, 359, 1084, 1147
SmaI CCCGGG 1 cut(s) 52
SmiMI CAYNNNNRTG 3 cut(s) 299, 795, 1640
SmlI CTYRAG 3 cut(s) 89, 776, 1223
SmoI CTYRAG 3 cut(s) 89, 776, 1223
SsiI CCGC 9 cut(s) 63, 189, 404, 421, 787, 956, 1343, 1381, 1765
SspI AATATT 2 cut(s) 1572, 1786
SspMI CTAG 5 cut(s) 783, 1058, 1121, 1518, 1804
SstI GAGCTC 2 cut(s) 38, 80
StyD4I CCNGG 5 cut(s) 49, 50, 66, 583, 1287
StyI CCWWGG 7 cut(s) 192, 436, 498, 531, 1038, 1101, 1683
TaaI ACNGT 3 cut(s) 325, 1372, 1396
TaiI ACGT 1 cut(s) 334
TaqI TCGA 5 cut(s) 38, 468, 762, 995, 1013
TaqII GACCGA 1 cut(s) 224
TauI GCSGC 3 cut(s) 191, 790, 1768
TfiI GAWTC 4 cut(s) 28, 277, 1441, 1699
Tru1I TTAA 6 cut(s) 477, 573, 663, 777, 903, 1437
Tru9I TTAA 6 cut(s) 477, 573, 663, 777, 903, 1437
TscAI CASTG 5 cut(s) 306, 330, 750, 838, 1375
TseFI GTSAC 3 cut(s) 554, 680, 1396
TseI GCWGC 1 cut(s) 162
Tsp45I GTSAC 3 cut(s) 554, 680, 1396
TspDTI ATGAA 6 cut(s) 425, 440, 911, 939, 1519, 1635
TspGWI ACGGA 1 cut(s) 88
TspMI CCCGGG 1 cut(s) 50
TspRI CASTG 5 cut(s) 306, 330, 750, 838, 1375
Tth111I GACNNNGTC 1 cut(s) 506
Vha464I CTTAAG 1 cut(s) 776
VneI GTGCAC 1 cut(s) 349
VpaK11BI GGWCC 4 cut(s) 54, 359, 1084, 1147
VspI ATTAAT 1 cut(s) 573
XapI RAATTY 3 cut(s) 593, 857, 1003
XceI RCATGY 2 cut(s) 688, 968
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XmaI CCCGGG 1 cut(s) 50
XmnI GAANNNNTTC 1 cut(s) 918
XspI CTAG 5 cut(s) 783, 1058, 1121, 1518, 1804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.