Rmu_sc0013558.1_g000002
BZIP Family

G-box-binding factor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013558.1
Physical Location & Seq
Reverse (-)
18197 .. 22329
4133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013558.1_g000002.1.cds

Sequence Viewer

Length: 1362 bp
atgcatgtcataggagggactaatcatgccgcggggaccacttatgaggtcgttgattatgcttggcggtggaagttgtgggttggttgggcggcatgtctggggatgaagagggcgggggagatgggatttgtggcgggtcaaagcctcgatggtcagagatggtggacttctggattggggattgtcaatgcattccgggttggcgctatgagtcctcgacttgatttgggttgggtggacttctggtttggggtgtgggctgtggatctctggcggtggggcgagcggatggtggcggtccgtcgcaggtggtggcatgtcaggaatgaggggacaaaggtgggggttgtgcaggaactgggctgggcctgtttggtggctctgatttctcttctacttcggctggatgtggggtttgggctcaattttgggccctgtcctagacaatcttctctgtcgcggtctcggagatcgttcctgttctggagttgggtcagcagcggtggcgaaacagtctggctagacaatcatccttggccttctagtgggtccttcctatctgggatcgggtcggaggcgatggcgttttggagcagtggtggatggatggtgtcgacaataggactcctacatcagtaccaccaacaaattcagagtcggaagggaatggcgcagataggaaagagcgagctagcttcagccaaaaaacccaagggagctgtaggaaatacaggtttggttagtggcaaggctgggaagagtggaaaagcaacttctggttctagaatgatggagtttcacaaagtggcattttgtgatctgcaggctctccacatggttttagatagcccgattaataaagttgggaagttgcgatgtgtgtatatgaagaccgaggatggtaaacttattgagattaaaccatatgttcgtatcccaaggacgagctctatgcaggcttattatggtgctggagctgctccaccgccctttttcgcttcctctgttgcttcaccagcaccgcacccatatatgtggggagcccagcatcctatgatgccgccttatggaactcctgttccgtaccctgctatatatcctccaggtggagtttatgctcatccgggtatggtcacgactcctacttcagtaccaccaacaaatccagagtcggaagggaagggtgcagatgggaaagagcgagcttcagccaaaaaacccaagggagctgcaggaaatacagttaaggctggggagagtggaaaagcaacttctggttctggaaatgatggagcttcacaaaggtcagtggtctttgcattgtgttatgcctttttacaagctttagattgctcttga

Protein Analysis

453

Amino Acids

49.01

Weight (kDa)

9.69

Isoelectric Point (pI)

47.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019943)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 300
Acc36I ACCTGC 1 cut(s) 300
AccBSI CCGCTC 1 cut(s) 289
AccI GTMKAC 1 cut(s) 617
AccII CGCG 2 cut(s) 32, 463
AclWI GGATC 2 cut(s) 276, 575
AcsI RAATTY 1 cut(s) 651
AcuI CTGAAG 3 cut(s) 684, 1134, 1194
AdeI CACNNNGTG 1 cut(s) 808
AfaI GTAC 3 cut(s) 641, 1088, 1155
AfiI CCNNNNNNNGG 3 cut(s) 548, 1070, 1109
AjnI CCWGG 1 cut(s) 1105
AloI GAACNNNNNNTCC 4 cut(s) 1065, 1066, 1097, 1098
AluBI AGCT 9 cut(s) 694, 698, 722, 951, 980, 1208, 1232, 1298, 1346
AluI AGCT 9 cut(s) 694, 698, 722, 951, 980, 1208, 1232, 1298, 1346
Alw21I GWGCWC 1 cut(s) 953
Alw26I GTCTC 1 cut(s) 471
AlwI GGATC 2 cut(s) 276, 575
AlwNI CAGNNNCTG 1 cut(s) 361
AoxI GGCC 3 cut(s) 369, 434, 539
ApaI GGGCCC 1 cut(s) 438
ApeKI GCWGC 3 cut(s) 501, 980, 1232
ApoI RAATTY 1 cut(s) 651
ArsI GACNNNNNNTTYG 6 cut(s) 233, 265, 643, 675, 1157, 1189
AseI ATTAAT 1 cut(s) 858
AspLEI GCGC 2 cut(s) 209, 676
AspS9I GGNCC 6 cut(s) 36, 301, 369, 434, 435, 552
AsuC2I CCSGG 2 cut(s) 200, 1128
AsuHPI GGTGA 1 cut(s) 1008
AsuNHI GCTAGC 1 cut(s) 694
AvaII GGWCC 3 cut(s) 36, 301, 552
BaeGI GKGCMC 1 cut(s) 438
BaeI ACNNNNGTAYC 4 cut(s) 623, 656, 1137, 1170
BanII GRGCYC 4 cut(s) 426, 438, 953, 1048
BbsI GAAGAC 1 cut(s) 899
Bbv12I GWGCWC 1 cut(s) 953
BbvI GCAGC 3 cut(s) 513, 967, 1219
BcgI CGANNNNNNTGC 2 cut(s) 937, 971
BciT130I CCWGG 1 cut(s) 1107
BciVI GTATCC 1 cut(s) 947
BcnI CCSGG 2 cut(s) 200, 1128
BcoDI GTCTC 1 cut(s) 471
BfaI CTAG 5 cut(s) 444, 524, 546, 695, 786
BfmI CTRYAG 3 cut(s) 723, 824, 1233
BfoI RGCGCY 1 cut(s) 210
BfuAI ACCTGC 1 cut(s) 300
BfuI GTATCC 1 cut(s) 947
BisI GCNGC 6 cut(s) 30, 93, 502, 981, 1064, 1233
BlsI GCNGC 6 cut(s) 31, 94, 503, 982, 1065, 1234
Bme1390I CCNGG 3 cut(s) 200, 1107, 1128
Bme18I GGWCC 3 cut(s) 36, 301, 552
BmgT120I GGNCC 6 cut(s) 36, 301, 369, 434, 435, 552
BmiI GGNNCC 4 cut(s) 37, 436, 553, 1045
BmrFI CCNGG 3 cut(s) 200, 1107, 1128
BmrI ACTGGG 1 cut(s) 371
BmsI GCATC 2 cut(s) 1050, 1060
BmtI GCTAGC 1 cut(s) 698
BmuI ACTGGG 1 cut(s) 371
BpiI GAAGAC 1 cut(s) 899
BpmI CTGGAG 3 cut(s) 508, 996, 1089
BpuMI CCSGG 2 cut(s) 200, 1128
BsaI GGTCTC 1 cut(s) 471
BsaJI CCNNGG 6 cut(s) 30, 536, 714, 897, 941, 1224
BsaXI ACNNNNNCTCC 2 cut(s) 586, 616
Bsc4I CCNNNNNNNGG 3 cut(s) 548, 1070, 1109
Bse1I ACTGG 1 cut(s) 366
BseBI CCWGG 1 cut(s) 1107
BseDI CCNNGG 6 cut(s) 30, 536, 714, 897, 941, 1224
BseGI GGATG 9 cut(s) 111, 297, 415, 532, 611, 615, 907, 1051, 1123
BseLI CCNNNNNNNGG 3 cut(s) 548, 1070, 1109
BseNI ACTGG 1 cut(s) 366
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 3 cut(s) 513, 967, 1219
BseYI CCCAGC 4 cut(s) 366, 755, 1047, 1253
BsgI GTGCAG 2 cut(s) 374, 1209
Bsh1236I CGCG 2 cut(s) 32, 463
BshFI GGCC 3 cut(s) 371, 436, 541
BsiHKAI GWGCWC 1 cut(s) 953
BsiSI CCGG 2 cut(s) 199, 1127
BslFI GGGAC 3 cut(s) 31, 49, 349
BslI CCNNNNNNNGG 3 cut(s) 548, 1070, 1109
BsmAI GTCTC 1 cut(s) 471
BsmFI GGGAC 3 cut(s) 31, 49, 349
BsmI GAATGC 1 cut(s) 194
BsnI GGCC 3 cut(s) 371, 436, 541
Bso31I GGTCTC 1 cut(s) 471
Bsp120I GGGCCC 1 cut(s) 434
Bsp1286I GDGCHC 4 cut(s) 426, 438, 953, 1048
Bsp143I GATC 4 cut(s) 268, 473, 567, 820
BspANI GGCC 3 cut(s) 371, 436, 541
BspFNI CGCG 2 cut(s) 32, 463
BspLI GGNNCC 4 cut(s) 37, 436, 553, 1045
BspMAI CTGCAG 2 cut(s) 828, 1237
BspMI ACCTGC 1 cut(s) 300
BspOI GCTAGC 1 cut(s) 698
BspPI GGATC 2 cut(s) 276, 575
BspTNI GGTCTC 1 cut(s) 471
BsrBI CCGCTC 1 cut(s) 289
BsrI ACTGG 1 cut(s) 366
BssECI CCNNGG 6 cut(s) 30, 536, 714, 897, 941, 1224
BssMI GATC 4 cut(s) 268, 473, 567, 820
BssT1I CCWWGG 4 cut(s) 536, 714, 941, 1224
Bst2UI CCWGG 1 cut(s) 1107
Bst4CI ACNGT 2 cut(s) 517, 1246
Bst6I CTCTTC 3 cut(s) 104, 399, 755
BstC8I GCNNGC 6 cut(s) 287, 692, 696, 828, 960, 1206
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 9 cut(s) 111, 297, 415, 532, 611, 615, 907, 1051, 1123
BstFNI CGCG 2 cut(s) 32, 463
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 2 cut(s) 209, 676
BstKTI GATC 4 cut(s) 271, 476, 570, 823
BstMAI GTCTC 1 cut(s) 471
BstMBI GATC 4 cut(s) 268, 473, 567, 820
BstMWI GCNNNNNNNGC 3 cut(s) 507, 980, 1019
BstNI CCWGG 1 cut(s) 1107
BstNSI RCATGY 3 cut(s) 8, 99, 323
BstSCI CCNGG 3 cut(s) 198, 1105, 1126
BstSFI CTRYAG 3 cut(s) 723, 824, 1233
BstSLI GKGCMC 1 cut(s) 438
BstUI CGCG 2 cut(s) 32, 463
BstV1I GCAGC 3 cut(s) 513, 967, 1219
BstV2I GAAGAC 1 cut(s) 899
BstX2I RGATCY 1 cut(s) 268
BstXI CCANNNNNNTGG 1 cut(s) 1038
BstYI RGATCY 1 cut(s) 268
BsuI GTATCC 1 cut(s) 947
BsuRI GGCC 3 cut(s) 371, 436, 541
BtgI CCRYGG 1 cut(s) 30
BtgZI GCGATG 2 cut(s) 596, 892
BtsCI GGATG 9 cut(s) 111, 297, 415, 532, 611, 615, 907, 1051, 1123
BtsI GCAGTG 1 cut(s) 604
BtsIMutI CAGTG 2 cut(s) 604, 1317
BveI ACCTGC 1 cut(s) 300
Cac8I GCNNGC 6 cut(s) 287, 692, 696, 828, 960, 1206
CaiI CAGNNNCTG 1 cut(s) 361
CfoI GCGC 2 cut(s) 209, 676
Cfr13I GGNCC 6 cut(s) 36, 301, 369, 434, 435, 552
Cfr42I CCGCGG 1 cut(s) 33
CpoI CGGWCCG 1 cut(s) 301
Csp6I GTAC 3 cut(s) 640, 1087, 1154
CspI CGGWCCG 1 cut(s) 301
CviAII CATG 5 cut(s) 5, 26, 96, 320, 838
CviQI GTAC 3 cut(s) 640, 1087, 1154
DpnI GATC 4 cut(s) 270, 475, 569, 822
DpnII GATC 4 cut(s) 268, 473, 567, 820
DraIII CACNNNGTG 1 cut(s) 808
Eam1104I CTCTTC 3 cut(s) 104, 399, 755
EarI CTCTTC 3 cut(s) 104, 399, 755
Ecl136II GAGCTC 1 cut(s) 951
Eco130I CCWWGG 4 cut(s) 536, 714, 941, 1224
Eco24I GRGCYC 4 cut(s) 426, 438, 953, 1048
Eco31I GGTCTC 1 cut(s) 471
Eco47I GGWCC 3 cut(s) 36, 301, 552
Eco53kI GAGCTC 1 cut(s) 951
Eco57I CTGAAG 3 cut(s) 684, 1134, 1194
EcoICRI GAGCTC 1 cut(s) 951
EcoO109I RGGNCCY 2 cut(s) 435, 552
EcoRII CCWGG 1 cut(s) 1105
EcoT14I CCWWGG 4 cut(s) 536, 714, 941, 1224
EcoT22I ATGCAT 2 cut(s) 6, 196
EcoT38I GRGCYC 4 cut(s) 426, 438, 953, 1048
ErhI CCWWGG 4 cut(s) 536, 714, 941, 1224
FaeI CATG 5 cut(s) 8, 29, 99, 323, 841
FaqI GGGAC 3 cut(s) 31, 49, 349
FatI CATG 5 cut(s) 4, 25, 95, 319, 837
FauI CCCGC 3 cut(s) 25, 109, 130
FauNDI CATATG 1 cut(s) 928
FblI GTMKAC 1 cut(s) 617
Fnu4HI GCNGC 6 cut(s) 30, 93, 502, 981, 1064, 1233
FokI GGATG 9 cut(s) 118, 304, 422, 519, 618, 622, 914, 1038, 1110
FriOI GRGCYC 4 cut(s) 426, 438, 953, 1048
Fsp4HI GCNGC 6 cut(s) 30, 93, 502, 981, 1064, 1233
FspBI CTAG 5 cut(s) 444, 524, 546, 695, 786
GlaI GCGC 2 cut(s) 208, 675
GluI GCNGC 6 cut(s) 30, 93, 502, 981, 1064, 1233
GsaI CCCAGC 4 cut(s) 370, 759, 1051, 1257
GsuI CTGGAG 3 cut(s) 508, 996, 1089
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 3 cut(s) 371, 436, 541
HapII CCGG 2 cut(s) 199, 1127
HhaI GCGC 2 cut(s) 209, 676
Hin1II CATG 5 cut(s) 8, 29, 99, 323, 841
Hin6I GCGC 2 cut(s) 207, 674
HinP1I GCGC 2 cut(s) 207, 674
HincII GTYRAC 1 cut(s) 618
HindII GTYRAC 1 cut(s) 618
HindIII AAGCTT 1 cut(s) 1344
HinfI GANTC 5 cut(s) 214, 627, 658, 1141, 1172
HpaII CCGG 2 cut(s) 199, 1127
HphI GGTGA 1 cut(s) 1008
Hpy166II GTNNAC 4 cut(s) 168, 241, 618, 908
Hpy188I TCNGA 7 cut(s) 159, 387, 471, 577, 657, 663, 1177
Hpy188III TCNNGA 8 cut(s) 174, 325, 487, 786, 1138, 1169, 1284, 1359
Hpy8I GTNNAC 4 cut(s) 168, 241, 618, 908
Hpy99I CGWCG 1 cut(s) 309
HpyAV CCTTC 5 cut(s) 552, 565, 658, 1172, 1177
HpyCH4III ACNGT 2 cut(s) 517, 1246
HpyCH4V TGCA 8 cut(s) 4, 194, 355, 826, 958, 1190, 1235, 1322
HpyF10VI GCNNNNNNNGC 3 cut(s) 507, 980, 1019
Hsp92II CATG 5 cut(s) 8, 29, 99, 323, 841
HspAI GCGC 2 cut(s) 207, 674
KspI CCGCGG 1 cut(s) 33
Kzo9I GATC 4 cut(s) 268, 473, 567, 820
LmnI GCTCC 7 cut(s) 594, 719, 977, 988, 1043, 1229, 1295
Lsp1109I GCAGC 3 cut(s) 513, 967, 1219
LweI GCATC 2 cut(s) 1050, 1060
MaeI CTAG 5 cut(s) 444, 524, 546, 695, 786
MaeIII GTNAC 1 cut(s) 1135
MalI GATC 4 cut(s) 270, 475, 569, 822
MbiI CCGCTC 1 cut(s) 289
MboI GATC 4 cut(s) 268, 473, 567, 820
MboII GAAGA 5 cut(s) 121, 386, 444, 772, 904
MflI RGATCY 1 cut(s) 268
MhlI GDGCHC 4 cut(s) 426, 438, 953, 1048
MluCI AATT 2 cut(s) 427, 651
MlyI GAGTC 5 cut(s) 223, 621, 667, 1135, 1181
MmeI TCCRAC 3 cut(s) 555, 641, 1155
Mph1103I ATGCAT 2 cut(s) 6, 196
MseI TTAA 3 cut(s) 858, 921, 1248
MslI CAYNNNNRTG 1 cut(s) 1036
MspA1I CMGCKG 2 cut(s) 32, 504
MspI CCGG 2 cut(s) 199, 1127
MspR9I CCNGG 3 cut(s) 200, 1107, 1128
Mva1269I GAATGC 1 cut(s) 194
MvaI CCWGG 1 cut(s) 1107
MvnI CGCG 2 cut(s) 32, 463
MwoI GCNNNNNNNGC 3 cut(s) 507, 980, 1019
NciI CCSGG 2 cut(s) 200, 1128
NdeI CATATG 1 cut(s) 928
NdeII GATC 4 cut(s) 268, 473, 567, 820
NheI GCTAGC 1 cut(s) 694
NlaIII CATG 5 cut(s) 8, 29, 99, 323, 841
NlaIV GGNNCC 4 cut(s) 37, 436, 553, 1045
NmuCI GTSAC 1 cut(s) 1135
NsiI ATGCAT 2 cut(s) 6, 196
NspI RCATGY 3 cut(s) 8, 99, 323
PaqCI CACCTGC 1 cut(s) 300
PctI GAATGC 1 cut(s) 194
PkrI GCNGC 6 cut(s) 31, 94, 503, 982, 1065, 1234
PleI GAGTC 5 cut(s) 222, 621, 666, 1135, 1180
PpsI GAGTC 5 cut(s) 222, 621, 666, 1135, 1180
PpuMI RGGWCCY 1 cut(s) 552
PshBI ATTAAT 1 cut(s) 858
Psp124BI GAGCTC 1 cut(s) 953
Psp5II RGGWCCY 1 cut(s) 552
Psp6I CCWGG 1 cut(s) 1105
PspFI CCCAGC 4 cut(s) 366, 755, 1047, 1253
PspGI CCWGG 1 cut(s) 1105
PspN4I GGNNCC 4 cut(s) 37, 436, 553, 1045
PspOMI GGGCCC 1 cut(s) 434
PspPI GGNCC 6 cut(s) 36, 301, 369, 434, 435, 552
PspPPI RGGWCCY 1 cut(s) 552
PstI CTGCAG 2 cut(s) 828, 1237
PstNI CAGNNNCTG 1 cut(s) 361
PsuI RGATCY 1 cut(s) 268
RsaI GTAC 3 cut(s) 641, 1088, 1155
RsaNI GTAC 3 cut(s) 640, 1087, 1154
RseI CAYNNNNRTG 1 cut(s) 1036
Rsr2I CGGWCCG 1 cut(s) 301
RsrII CGGWCCG 1 cut(s) 301
SacI GAGCTC 1 cut(s) 953
SacII CCGCGG 1 cut(s) 33
SalI GTCGAC 1 cut(s) 616
SaqAI TTAA 3 cut(s) 858, 921, 1248
SatI GCNGC 6 cut(s) 30, 93, 502, 981, 1064, 1233
Sau3AI GATC 4 cut(s) 268, 473, 567, 820
Sau96I GGNCC 6 cut(s) 36, 301, 369, 434, 435, 552
SchI GAGTC 5 cut(s) 223, 621, 667, 1135, 1181
ScrFI CCNGG 3 cut(s) 200, 1107, 1128
SduI GDGCHC 4 cut(s) 426, 438, 953, 1048
SfaNI GCATC 2 cut(s) 1050, 1060
SfcI CTRYAG 3 cut(s) 723, 824, 1233
Sfr303I CCGCGG 1 cut(s) 33
SgrBI CCGCGG 1 cut(s) 33
SinI GGWCC 3 cut(s) 36, 301, 552
SmiMI CAYNNNNRTG 1 cut(s) 1036
Sse9I AATT 2 cut(s) 427, 651
SspMI CTAG 5 cut(s) 444, 524, 546, 695, 786
SstI GAGCTC 1 cut(s) 953
StyD4I CCNGG 3 cut(s) 198, 1105, 1126
StyI CCWWGG 4 cut(s) 536, 714, 941, 1224
TaaI ACNGT 2 cut(s) 517, 1246
TaqI TCGA 3 cut(s) 150, 220, 617
TaqII GACCGA 1 cut(s) 911
TasI AATT 2 cut(s) 427, 651
TauI GCSGC 3 cut(s) 32, 95, 1066
Tru1I TTAA 3 cut(s) 858, 921, 1248
Tru9I TTAA 3 cut(s) 858, 921, 1248
TscAI CASTG 2 cut(s) 604, 1317
TseFI GTSAC 1 cut(s) 1135
TseI GCWGC 3 cut(s) 501, 980, 1232
Tsp45I GTSAC 1 cut(s) 1135
TspDTI ATGAA 2 cut(s) 122, 905
TspGWI ACGGA 2 cut(s) 293, 1074
TspRI CASTG 2 cut(s) 604, 1317
VpaK11BI GGWCC 3 cut(s) 36, 301, 552
VspI ATTAAT 1 cut(s) 858
XapI RAATTY 1 cut(s) 651
XbaI TCTAGA 1 cut(s) 785
XceI RCATGY 3 cut(s) 8, 99, 323
XmiI GTMKAC 1 cut(s) 617
XspI CTAG 5 cut(s) 444, 524, 546, 695, 786
Zsp2I ATGCAT 2 cut(s) 6, 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.