G-box-binding factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0055841 |
| rosa_multiflora | Rmu_sc0012347.1_g000001 Rmu_sc0013558.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00047060 Rroxscaffold_1G00058830 Rroxscaffold_1G00074050 |
| rosa_rugosa | Rorug07G0177100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 300 |
| Acc36I | ACCTGC | 1 cut(s) | 300 |
| AccBSI | CCGCTC | 1 cut(s) | 289 |
| AccI | GTMKAC | 1 cut(s) | 617 |
| AccII | CGCG | 2 cut(s) | 32, 463 |
| AclWI | GGATC | 2 cut(s) | 276, 575 |
| AcsI | RAATTY | 1 cut(s) | 651 |
| AcuI | CTGAAG | 3 cut(s) | 684, 1134, 1194 |
| AdeI | CACNNNGTG | 1 cut(s) | 808 |
| AfaI | GTAC | 3 cut(s) | 641, 1088, 1155 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 548, 1070, 1109 |
| AjnI | CCWGG | 1 cut(s) | 1105 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1065, 1066, 1097, 1098 |
| AluBI | AGCT | 9 cut(s) | 694, 698, 722, 951, 980, 1208, 1232, 1298, 1346 |
| AluI | AGCT | 9 cut(s) | 694, 698, 722, 951, 980, 1208, 1232, 1298, 1346 |
| Alw21I | GWGCWC | 1 cut(s) | 953 |
| Alw26I | GTCTC | 1 cut(s) | 471 |
| AlwI | GGATC | 2 cut(s) | 276, 575 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 361 |
| AoxI | GGCC | 3 cut(s) | 369, 434, 539 |
| ApaI | GGGCCC | 1 cut(s) | 438 |
| ApeKI | GCWGC | 3 cut(s) | 501, 980, 1232 |
| ApoI | RAATTY | 1 cut(s) | 651 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 233, 265, 643, 675, 1157, 1189 |
| AseI | ATTAAT | 1 cut(s) | 858 |
| AspLEI | GCGC | 2 cut(s) | 209, 676 |
| AspS9I | GGNCC | 6 cut(s) | 36, 301, 369, 434, 435, 552 |
| AsuC2I | CCSGG | 2 cut(s) | 200, 1128 |
| AsuHPI | GGTGA | 1 cut(s) | 1008 |
| AsuNHI | GCTAGC | 1 cut(s) | 694 |
| AvaII | GGWCC | 3 cut(s) | 36, 301, 552 |
| BaeGI | GKGCMC | 1 cut(s) | 438 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 623, 656, 1137, 1170 |
| BanII | GRGCYC | 4 cut(s) | 426, 438, 953, 1048 |
| BbsI | GAAGAC | 1 cut(s) | 899 |
| Bbv12I | GWGCWC | 1 cut(s) | 953 |
| BbvI | GCAGC | 3 cut(s) | 513, 967, 1219 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 937, 971 |
| BciT130I | CCWGG | 1 cut(s) | 1107 |
| BciVI | GTATCC | 1 cut(s) | 947 |
| BcnI | CCSGG | 2 cut(s) | 200, 1128 |
| BcoDI | GTCTC | 1 cut(s) | 471 |
| BfaI | CTAG | 5 cut(s) | 444, 524, 546, 695, 786 |
| BfmI | CTRYAG | 3 cut(s) | 723, 824, 1233 |
| BfoI | RGCGCY | 1 cut(s) | 210 |
| BfuAI | ACCTGC | 1 cut(s) | 300 |
| BfuI | GTATCC | 1 cut(s) | 947 |
| BisI | GCNGC | 6 cut(s) | 30, 93, 502, 981, 1064, 1233 |
| BlsI | GCNGC | 6 cut(s) | 31, 94, 503, 982, 1065, 1234 |
| Bme1390I | CCNGG | 3 cut(s) | 200, 1107, 1128 |
| Bme18I | GGWCC | 3 cut(s) | 36, 301, 552 |
| BmgT120I | GGNCC | 6 cut(s) | 36, 301, 369, 434, 435, 552 |
| BmiI | GGNNCC | 4 cut(s) | 37, 436, 553, 1045 |
| BmrFI | CCNGG | 3 cut(s) | 200, 1107, 1128 |
| BmrI | ACTGGG | 1 cut(s) | 371 |
| BmsI | GCATC | 2 cut(s) | 1050, 1060 |
| BmtI | GCTAGC | 1 cut(s) | 698 |
| BmuI | ACTGGG | 1 cut(s) | 371 |
| BpiI | GAAGAC | 1 cut(s) | 899 |
| BpmI | CTGGAG | 3 cut(s) | 508, 996, 1089 |
| BpuMI | CCSGG | 2 cut(s) | 200, 1128 |
| BsaI | GGTCTC | 1 cut(s) | 471 |
| BsaJI | CCNNGG | 6 cut(s) | 30, 536, 714, 897, 941, 1224 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 586, 616 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 548, 1070, 1109 |
| Bse1I | ACTGG | 1 cut(s) | 366 |
| BseBI | CCWGG | 1 cut(s) | 1107 |
| BseDI | CCNNGG | 6 cut(s) | 30, 536, 714, 897, 941, 1224 |
| BseGI | GGATG | 9 cut(s) | 111, 297, 415, 532, 611, 615, 907, 1051, 1123 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 548, 1070, 1109 |
| BseNI | ACTGG | 1 cut(s) | 366 |
| BseSI | GKGCMC | 1 cut(s) | 438 |
| BseXI | GCAGC | 3 cut(s) | 513, 967, 1219 |
| BseYI | CCCAGC | 4 cut(s) | 366, 755, 1047, 1253 |
| BsgI | GTGCAG | 2 cut(s) | 374, 1209 |
| Bsh1236I | CGCG | 2 cut(s) | 32, 463 |
| BshFI | GGCC | 3 cut(s) | 371, 436, 541 |
| BsiHKAI | GWGCWC | 1 cut(s) | 953 |
| BsiSI | CCGG | 2 cut(s) | 199, 1127 |
| BslFI | GGGAC | 3 cut(s) | 31, 49, 349 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 548, 1070, 1109 |
| BsmAI | GTCTC | 1 cut(s) | 471 |
| BsmFI | GGGAC | 3 cut(s) | 31, 49, 349 |
| BsmI | GAATGC | 1 cut(s) | 194 |
| BsnI | GGCC | 3 cut(s) | 371, 436, 541 |
| Bso31I | GGTCTC | 1 cut(s) | 471 |
| Bsp120I | GGGCCC | 1 cut(s) | 434 |
| Bsp1286I | GDGCHC | 4 cut(s) | 426, 438, 953, 1048 |
| Bsp143I | GATC | 4 cut(s) | 268, 473, 567, 820 |
| BspANI | GGCC | 3 cut(s) | 371, 436, 541 |
| BspFNI | CGCG | 2 cut(s) | 32, 463 |
| BspLI | GGNNCC | 4 cut(s) | 37, 436, 553, 1045 |
| BspMAI | CTGCAG | 2 cut(s) | 828, 1237 |
| BspMI | ACCTGC | 1 cut(s) | 300 |
| BspOI | GCTAGC | 1 cut(s) | 698 |
| BspPI | GGATC | 2 cut(s) | 276, 575 |
| BspTNI | GGTCTC | 1 cut(s) | 471 |
| BsrBI | CCGCTC | 1 cut(s) | 289 |
| BsrI | ACTGG | 1 cut(s) | 366 |
| BssECI | CCNNGG | 6 cut(s) | 30, 536, 714, 897, 941, 1224 |
| BssMI | GATC | 4 cut(s) | 268, 473, 567, 820 |
| BssT1I | CCWWGG | 4 cut(s) | 536, 714, 941, 1224 |
| Bst2UI | CCWGG | 1 cut(s) | 1107 |
| Bst4CI | ACNGT | 2 cut(s) | 517, 1246 |
| Bst6I | CTCTTC | 3 cut(s) | 104, 399, 755 |
| BstC8I | GCNNGC | 6 cut(s) | 287, 692, 696, 828, 960, 1206 |
| BstDSI | CCRYGG | 1 cut(s) | 30 |
| BstF5I | GGATG | 9 cut(s) | 111, 297, 415, 532, 611, 615, 907, 1051, 1123 |
| BstFNI | CGCG | 2 cut(s) | 32, 463 |
| BstH2I | RGCGCY | 1 cut(s) | 210 |
| BstHHI | GCGC | 2 cut(s) | 209, 676 |
| BstKTI | GATC | 4 cut(s) | 271, 476, 570, 823 |
| BstMAI | GTCTC | 1 cut(s) | 471 |
| BstMBI | GATC | 4 cut(s) | 268, 473, 567, 820 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 507, 980, 1019 |
| BstNI | CCWGG | 1 cut(s) | 1107 |
| BstNSI | RCATGY | 3 cut(s) | 8, 99, 323 |
| BstSCI | CCNGG | 3 cut(s) | 198, 1105, 1126 |
| BstSFI | CTRYAG | 3 cut(s) | 723, 824, 1233 |
| BstSLI | GKGCMC | 1 cut(s) | 438 |
| BstUI | CGCG | 2 cut(s) | 32, 463 |
| BstV1I | GCAGC | 3 cut(s) | 513, 967, 1219 |
| BstV2I | GAAGAC | 1 cut(s) | 899 |
| BstX2I | RGATCY | 1 cut(s) | 268 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1038 |
| BstYI | RGATCY | 1 cut(s) | 268 |
| BsuI | GTATCC | 1 cut(s) | 947 |
| BsuRI | GGCC | 3 cut(s) | 371, 436, 541 |
| BtgI | CCRYGG | 1 cut(s) | 30 |
| BtgZI | GCGATG | 2 cut(s) | 596, 892 |
| BtsCI | GGATG | 9 cut(s) | 111, 297, 415, 532, 611, 615, 907, 1051, 1123 |
| BtsI | GCAGTG | 1 cut(s) | 604 |
| BtsIMutI | CAGTG | 2 cut(s) | 604, 1317 |
| BveI | ACCTGC | 1 cut(s) | 300 |
| Cac8I | GCNNGC | 6 cut(s) | 287, 692, 696, 828, 960, 1206 |
| CaiI | CAGNNNCTG | 1 cut(s) | 361 |
| CfoI | GCGC | 2 cut(s) | 209, 676 |
| Cfr13I | GGNCC | 6 cut(s) | 36, 301, 369, 434, 435, 552 |
| Cfr42I | CCGCGG | 1 cut(s) | 33 |
| CpoI | CGGWCCG | 1 cut(s) | 301 |
| Csp6I | GTAC | 3 cut(s) | 640, 1087, 1154 |
| CspI | CGGWCCG | 1 cut(s) | 301 |
| CviAII | CATG | 5 cut(s) | 5, 26, 96, 320, 838 |
| CviQI | GTAC | 3 cut(s) | 640, 1087, 1154 |
| DpnI | GATC | 4 cut(s) | 270, 475, 569, 822 |
| DpnII | GATC | 4 cut(s) | 268, 473, 567, 820 |
| DraIII | CACNNNGTG | 1 cut(s) | 808 |
| Eam1104I | CTCTTC | 3 cut(s) | 104, 399, 755 |
| EarI | CTCTTC | 3 cut(s) | 104, 399, 755 |
| Ecl136II | GAGCTC | 1 cut(s) | 951 |
| Eco130I | CCWWGG | 4 cut(s) | 536, 714, 941, 1224 |
| Eco24I | GRGCYC | 4 cut(s) | 426, 438, 953, 1048 |
| Eco31I | GGTCTC | 1 cut(s) | 471 |
| Eco47I | GGWCC | 3 cut(s) | 36, 301, 552 |
| Eco53kI | GAGCTC | 1 cut(s) | 951 |
| Eco57I | CTGAAG | 3 cut(s) | 684, 1134, 1194 |
| EcoICRI | GAGCTC | 1 cut(s) | 951 |
| EcoO109I | RGGNCCY | 2 cut(s) | 435, 552 |
| EcoRII | CCWGG | 1 cut(s) | 1105 |
| EcoT14I | CCWWGG | 4 cut(s) | 536, 714, 941, 1224 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 196 |
| EcoT38I | GRGCYC | 4 cut(s) | 426, 438, 953, 1048 |
| ErhI | CCWWGG | 4 cut(s) | 536, 714, 941, 1224 |
| FaeI | CATG | 5 cut(s) | 8, 29, 99, 323, 841 |
| FaqI | GGGAC | 3 cut(s) | 31, 49, 349 |
| FatI | CATG | 5 cut(s) | 4, 25, 95, 319, 837 |
| FauI | CCCGC | 3 cut(s) | 25, 109, 130 |
| FauNDI | CATATG | 1 cut(s) | 928 |
| FblI | GTMKAC | 1 cut(s) | 617 |
| Fnu4HI | GCNGC | 6 cut(s) | 30, 93, 502, 981, 1064, 1233 |
| FokI | GGATG | 9 cut(s) | 118, 304, 422, 519, 618, 622, 914, 1038, 1110 |
| FriOI | GRGCYC | 4 cut(s) | 426, 438, 953, 1048 |
| Fsp4HI | GCNGC | 6 cut(s) | 30, 93, 502, 981, 1064, 1233 |
| FspBI | CTAG | 5 cut(s) | 444, 524, 546, 695, 786 |
| GlaI | GCGC | 2 cut(s) | 208, 675 |
| GluI | GCNGC | 6 cut(s) | 30, 93, 502, 981, 1064, 1233 |
| GsaI | CCCAGC | 4 cut(s) | 370, 759, 1051, 1257 |
| GsuI | CTGGAG | 3 cut(s) | 508, 996, 1089 |
| HaeII | RGCGCY | 1 cut(s) | 210 |
| HaeIII | GGCC | 3 cut(s) | 371, 436, 541 |
| HapII | CCGG | 2 cut(s) | 199, 1127 |
| HhaI | GCGC | 2 cut(s) | 209, 676 |
| Hin1II | CATG | 5 cut(s) | 8, 29, 99, 323, 841 |
| Hin6I | GCGC | 2 cut(s) | 207, 674 |
| HinP1I | GCGC | 2 cut(s) | 207, 674 |
| HincII | GTYRAC | 1 cut(s) | 618 |
| HindII | GTYRAC | 1 cut(s) | 618 |
| HindIII | AAGCTT | 1 cut(s) | 1344 |
| HinfI | GANTC | 5 cut(s) | 214, 627, 658, 1141, 1172 |
| HpaII | CCGG | 2 cut(s) | 199, 1127 |
| HphI | GGTGA | 1 cut(s) | 1008 |
| Hpy166II | GTNNAC | 4 cut(s) | 168, 241, 618, 908 |
| Hpy188I | TCNGA | 7 cut(s) | 159, 387, 471, 577, 657, 663, 1177 |
| Hpy188III | TCNNGA | 8 cut(s) | 174, 325, 487, 786, 1138, 1169, 1284, 1359 |
| Hpy8I | GTNNAC | 4 cut(s) | 168, 241, 618, 908 |
| Hpy99I | CGWCG | 1 cut(s) | 309 |
| HpyAV | CCTTC | 5 cut(s) | 552, 565, 658, 1172, 1177 |
| HpyCH4III | ACNGT | 2 cut(s) | 517, 1246 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 194, 355, 826, 958, 1190, 1235, 1322 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 507, 980, 1019 |
| Hsp92II | CATG | 5 cut(s) | 8, 29, 99, 323, 841 |
| HspAI | GCGC | 2 cut(s) | 207, 674 |
| KspI | CCGCGG | 1 cut(s) | 33 |
| Kzo9I | GATC | 4 cut(s) | 268, 473, 567, 820 |
| LmnI | GCTCC | 7 cut(s) | 594, 719, 977, 988, 1043, 1229, 1295 |
| Lsp1109I | GCAGC | 3 cut(s) | 513, 967, 1219 |
| LweI | GCATC | 2 cut(s) | 1050, 1060 |
| MaeI | CTAG | 5 cut(s) | 444, 524, 546, 695, 786 |
| MaeIII | GTNAC | 1 cut(s) | 1135 |
| MalI | GATC | 4 cut(s) | 270, 475, 569, 822 |
| MbiI | CCGCTC | 1 cut(s) | 289 |
| MboI | GATC | 4 cut(s) | 268, 473, 567, 820 |
| MboII | GAAGA | 5 cut(s) | 121, 386, 444, 772, 904 |
| MflI | RGATCY | 1 cut(s) | 268 |
| MhlI | GDGCHC | 4 cut(s) | 426, 438, 953, 1048 |
| MluCI | AATT | 2 cut(s) | 427, 651 |
| MlyI | GAGTC | 5 cut(s) | 223, 621, 667, 1135, 1181 |
| MmeI | TCCRAC | 3 cut(s) | 555, 641, 1155 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 196 |
| MseI | TTAA | 3 cut(s) | 858, 921, 1248 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1036 |
| MspA1I | CMGCKG | 2 cut(s) | 32, 504 |
| MspI | CCGG | 2 cut(s) | 199, 1127 |
| MspR9I | CCNGG | 3 cut(s) | 200, 1107, 1128 |
| Mva1269I | GAATGC | 1 cut(s) | 194 |
| MvaI | CCWGG | 1 cut(s) | 1107 |
| MvnI | CGCG | 2 cut(s) | 32, 463 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 507, 980, 1019 |
| NciI | CCSGG | 2 cut(s) | 200, 1128 |
| NdeI | CATATG | 1 cut(s) | 928 |
| NdeII | GATC | 4 cut(s) | 268, 473, 567, 820 |
| NheI | GCTAGC | 1 cut(s) | 694 |
| NlaIII | CATG | 5 cut(s) | 8, 29, 99, 323, 841 |
| NlaIV | GGNNCC | 4 cut(s) | 37, 436, 553, 1045 |
| NmuCI | GTSAC | 1 cut(s) | 1135 |
| NsiI | ATGCAT | 2 cut(s) | 6, 196 |
| NspI | RCATGY | 3 cut(s) | 8, 99, 323 |
| PaqCI | CACCTGC | 1 cut(s) | 300 |
| PctI | GAATGC | 1 cut(s) | 194 |
| PkrI | GCNGC | 6 cut(s) | 31, 94, 503, 982, 1065, 1234 |
| PleI | GAGTC | 5 cut(s) | 222, 621, 666, 1135, 1180 |
| PpsI | GAGTC | 5 cut(s) | 222, 621, 666, 1135, 1180 |
| PpuMI | RGGWCCY | 1 cut(s) | 552 |
| PshBI | ATTAAT | 1 cut(s) | 858 |
| Psp124BI | GAGCTC | 1 cut(s) | 953 |
| Psp5II | RGGWCCY | 1 cut(s) | 552 |
| Psp6I | CCWGG | 1 cut(s) | 1105 |
| PspFI | CCCAGC | 4 cut(s) | 366, 755, 1047, 1253 |
| PspGI | CCWGG | 1 cut(s) | 1105 |
| PspN4I | GGNNCC | 4 cut(s) | 37, 436, 553, 1045 |
| PspOMI | GGGCCC | 1 cut(s) | 434 |
| PspPI | GGNCC | 6 cut(s) | 36, 301, 369, 434, 435, 552 |
| PspPPI | RGGWCCY | 1 cut(s) | 552 |
| PstI | CTGCAG | 2 cut(s) | 828, 1237 |
| PstNI | CAGNNNCTG | 1 cut(s) | 361 |
| PsuI | RGATCY | 1 cut(s) | 268 |
| RsaI | GTAC | 3 cut(s) | 641, 1088, 1155 |
| RsaNI | GTAC | 3 cut(s) | 640, 1087, 1154 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1036 |
| Rsr2I | CGGWCCG | 1 cut(s) | 301 |
| RsrII | CGGWCCG | 1 cut(s) | 301 |
| SacI | GAGCTC | 1 cut(s) | 953 |
| SacII | CCGCGG | 1 cut(s) | 33 |
| SalI | GTCGAC | 1 cut(s) | 616 |
| SaqAI | TTAA | 3 cut(s) | 858, 921, 1248 |
| SatI | GCNGC | 6 cut(s) | 30, 93, 502, 981, 1064, 1233 |
| Sau3AI | GATC | 4 cut(s) | 268, 473, 567, 820 |
| Sau96I | GGNCC | 6 cut(s) | 36, 301, 369, 434, 435, 552 |
| SchI | GAGTC | 5 cut(s) | 223, 621, 667, 1135, 1181 |
| ScrFI | CCNGG | 3 cut(s) | 200, 1107, 1128 |
| SduI | GDGCHC | 4 cut(s) | 426, 438, 953, 1048 |
| SfaNI | GCATC | 2 cut(s) | 1050, 1060 |
| SfcI | CTRYAG | 3 cut(s) | 723, 824, 1233 |
| Sfr303I | CCGCGG | 1 cut(s) | 33 |
| SgrBI | CCGCGG | 1 cut(s) | 33 |
| SinI | GGWCC | 3 cut(s) | 36, 301, 552 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1036 |
| Sse9I | AATT | 2 cut(s) | 427, 651 |
| SspMI | CTAG | 5 cut(s) | 444, 524, 546, 695, 786 |
| SstI | GAGCTC | 1 cut(s) | 953 |
| StyD4I | CCNGG | 3 cut(s) | 198, 1105, 1126 |
| StyI | CCWWGG | 4 cut(s) | 536, 714, 941, 1224 |
| TaaI | ACNGT | 2 cut(s) | 517, 1246 |
| TaqI | TCGA | 3 cut(s) | 150, 220, 617 |
| TaqII | GACCGA | 1 cut(s) | 911 |
| TasI | AATT | 2 cut(s) | 427, 651 |
| TauI | GCSGC | 3 cut(s) | 32, 95, 1066 |
| Tru1I | TTAA | 3 cut(s) | 858, 921, 1248 |
| Tru9I | TTAA | 3 cut(s) | 858, 921, 1248 |
| TscAI | CASTG | 2 cut(s) | 604, 1317 |
| TseFI | GTSAC | 1 cut(s) | 1135 |
| TseI | GCWGC | 3 cut(s) | 501, 980, 1232 |
| Tsp45I | GTSAC | 1 cut(s) | 1135 |
| TspDTI | ATGAA | 2 cut(s) | 122, 905 |
| TspGWI | ACGGA | 2 cut(s) | 293, 1074 |
| TspRI | CASTG | 2 cut(s) | 604, 1317 |
| VpaK11BI | GGWCC | 3 cut(s) | 36, 301, 552 |
| VspI | ATTAAT | 1 cut(s) | 858 |
| XapI | RAATTY | 1 cut(s) | 651 |
| XbaI | TCTAGA | 1 cut(s) | 785 |
| XceI | RCATGY | 3 cut(s) | 8, 99, 323 |
| XmiI | GTMKAC | 1 cut(s) | 617 |
| XspI | CTAG | 5 cut(s) | 444, 524, 546, 695, 786 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 196 |