Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013786.1

Orthogroup ID

OG0011225

Physical Location & Seq

Genomic Coordinates Reverse (-)

8121 .. 13042

Gene Structure 4922 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013786.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

atgccacccaagtccgcattcgtctcaccacaccactccactccactccaagccatggcgtcagtggccaccgtcctccgccggaagctctccggcaagccattccatttccgattactaccactccgatcattctccgactcgccgcagagaatcgagaagattctgatagccaaccggggcgaaattgcgtgcaggatcatgaggaccgcaaagagactcggaattcaaaccgtcgccgttttcagcgacgccgatagacactcgctccacgtcaaatccgccgacgaggccgttcgtatcggtccggctccggctcggctcagctacctcaacgcctcgtcgattcttgacgccgccgttcgtactggtgcgcaggctatccatcctggctatggttttctgtcagagagttccgactttgctcaactttgtgaggataagggtcttacctttattgggcctccagcatctgccatcagggacatgggtgataaaagtgcgtcaaagagaataatgggtgcagcaggggtacctcttgtgcctggatatcatgggaaagaccaagatattgatctaatgaagatagaagctgacaagattggatatccaatcttaataaagccaactcatggaggtgggggaaagggtatgaggattgtgcaaagtccggatgagtttgttgaagccttccttggagcacaacgtgaggctgctgcttcttttggcgtaaacacaattttgctggagaaatatattacacagccaagacacatagaagtccagatatttggggataaacacgggaatgttctacatttatatgagagagattgcagcgtacaaagaaggcaccagaaaataatcgaagaagccccagctccaaatgtttctgatgacttccggtctcacttgggtcaagcggctgtatctgctgccaaggcagttagctatcacagtgccggcacagtggaatttatagtcgatacagtctcaggccaattttatttcatggagatgaatacccgtcttcaggttgagcatcctgtgactgagatgattgttggccaagatcttgtagagtggcaaatacgtgtagcaaatggagaacaccttcccattagtcagtcacaggtccctttgtcaggtcatgcttttgaagcccgtatatatgctgaaaatgtaccaaaagggttccttcctgcaactggagttcttcatcactatcagcatgctccagtttcaccatcagttcgagttgagactggagttgaacaaggagacagtgttagcatgcattatgatcctatgattgccaagcttgtagtatggggagaaaatcgtgcagtagcactggtaaaactgaaggattgcttgacaaagtttcaggttgcaggtgtaccaaccaacatcagttttctgtcaaaacttgccaaccatcgggaatttgaaaatgggaatgtggaaactcattttattgaacattttaaagatgacctgtttgtcaacccctgtaatttggaagtaatgaacacagtgcttggtgctgctagatttgttgccaaactggcggctgcatgtctcattgaaaaggaaaattctgtattcagagaaaatcttcctggaagcaacaacacgatctccatatggtattcttctccgcctttcagagtcaatcattgtgctaggcatacaatggaactcgagtgggagaatgaatatgatagcagtggctcaaggttattgacctattccatcacttacaaatctgatgggagctatctaattgagacagaagaagacatttccccacctttggaggttaaagcaacttgtgtaggtgatcatgatttcagagttgaagctgatggtgtaatcatggatgttagcttagctgtttactcgaaggatcagaccaagcacattcatctgtggcatgggtcacatcatcatcattatagacaaaaattgggtcttgaattgtccgatgaagatgaaaccgaacataggcccagttttgatagatcatctcatcctccgggaacagttgttgcacccatggctggtttggtggtcaaggttcttattaaggatgcaacaagagtggaggaaggacagcctattttagtattagaggcaatgaagatggagcatgttgtaaaggcaccatcagcaggctatgtccacgggcttcatctagcagctggacagcaggtttctgatggcagtgttctcttcagtattaaggaggagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004485 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0005840 GO:0006082 GO:0006520 GO:0006551 GO:0006552 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009081 GO:0009083 GO:0009507 GO:0009536 GO:0009987 GO:0016054 GO:0016421 GO:0016874 GO:0016885 GO:0019752 GO:0022626 GO:0031974 GO:0032991 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0046395 GO:0046872 GO:0046914 GO:0050897 GO:0070013 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00280 ko01100 map00280 map01100

Pfam Domains

Protein Families

Biotin_carb_C Biotin_carb_N Biotin_lipoyl CPSase_L_D2

Protein Analysis

751

Amino Acids

82.77

Weight (kDa)

6.23

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03090 AT1G03090
fragaria_vesca	FvH4_2g23110 FvH4_2g23110 FvH4_2g23110 FvH4_2g23110
malus_domestica	MD11G1280500.v1.1
prunus_persica	Prupe.8G236400_v2.0.a1
pyrus_communis	pycom11g24820
rosa_chinensis	RchiOBHm_Chr6g0290331
rosa_laevigata	RLG00000012226
rosa_multiflora	Rmu_sc0013786.1_g000003
rosa_roxburghii	Rroxscaffold_7G00177150
rosa_rugosa	Rorug06G0211900
rosa_samantha	Rh6AG322200 Rh6BG329500 Rh6CG335400 Rh6DG322400
rosa_wichuraiana	Rw6G027820 Rw6G027920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1385
AasI	GACNNNNNNGTC	1 cut(s)	1502
Acc16I	TGCGCA	1 cut(s)	375
Acc36I	ACCTGC	2 cut(s)	1385, 2203
Acc65I	GGTACC	1 cut(s)	532
AccB1I	GGYRCC	3 cut(s)	532, 852, 2164
AccB7I	CCANNNNNTGG	2 cut(s)	55, 632
AccIII	TCCGGA	1 cut(s)	670
AciI	CCGC	9 cut(s)	15, 79, 146, 210, 282, 357, 923, 1571, 1661
AclWI	GGATC	3 cut(s)	206, 1298, 1917
AcoI	YGGCCR	2 cut(s)	66, 1066
AcsI	RAATTY	4 cut(s)	225, 974, 1445, 1597
AcuI	CTGAAG	3 cut(s)	1016, 1385, 2221
AcyI	GRCGYC	3 cut(s)	59, 252, 354
AdeI	CACNNNGTG	1 cut(s)	707
AfaI	GTAC	5 cut(s)	367, 534, 843, 1185, 1401
AflIII	ACRYGT	1 cut(s)	1093
AgsI	TTSAA	9 cut(s)	230, 686, 1160, 1274, 1451, 1481, 1589, 1862, 1979
AhdI	GACNNNNNGTC	1 cut(s)	904
AjiI	CACGTC	1 cut(s)	274
AjnI	CCWGG	3 cut(s)	388, 544, 1621
AjuI	GAANNNNNNNTTGG	3 cut(s)	34, 678, 710
Alw21I	GWGCWC	1 cut(s)	703
Alw26I	GTCTC	8 cut(s)	28, 211, 912, 997, 1256, 1275, 1586, 1784
AlwI	GGATC	3 cut(s)	206, 1298, 1917
AlwNI	CAGNNNCTG	1 cut(s)	473
Ama87I	CYCGRG	1 cut(s)	1703
Aor13HI	TCCGGA	1 cut(s)	670
AoxI	GGCC	6 cut(s)	66, 291, 461, 997, 1066, 2009
ApeKI	GCWGC	8 cut(s)	524, 713, 716, 837, 935, 1547, 1574, 2201
ApoI	RAATTY	4 cut(s)	225, 974, 1445, 1597
ArsI	GACNNNNNNTTYG	2 cut(s)	1957, 1989
Asp700I	GAANNNNTTC	2 cut(s)	1113, 1617
Asp718I	GGTACC	1 cut(s)	532
AspLEI	GCGC	1 cut(s)	376
AspS9I	GGNCC	5 cut(s)	207, 305, 461, 1135, 2010
AsuC2I	CCSGG	2 cut(s)	179, 2040
AsuHPI	GGTGA	4 cut(s)	18, 503, 1236, 1853
AvaI	CYCGRG	1 cut(s)	1703
AvaII	GGWCC	3 cut(s)	207, 305, 1135
BalI	TGGCCA	2 cut(s)	68, 1068
BanI	GGYRCC	3 cut(s)	532, 852, 2164
BbsI	GAAGAC	2 cut(s)	1022, 1806
Bbv12I	GWGCWC	1 cut(s)	703
BbvI	GCAGC	8 cut(s)	536, 700, 703, 849, 922, 1534, 1561, 2213
BceAI	ACGGC	3 cut(s)	224, 278, 344
BciT130I	CCWGG	3 cut(s)	390, 546, 1623
BclI	TGATCA	1 cut(s)	1843
BcnI	CCSGG	2 cut(s)	179, 2040
BcoDI	GTCTC	8 cut(s)	28, 211, 912, 997, 1256, 1275, 1586, 1784
BfaI	CTAG	3 cut(s)	1551, 1686, 2198
BfuAI	ACCTGC	2 cut(s)	1385, 2203
BglI	GCCNNNNNGGC	2 cut(s)	290, 1568
BglII	AGATCT	1 cut(s)	1072
BlpI	GCTNAGC	2 cut(s)	323, 1891
Bme1390I	CCNGG	5 cut(s)	179, 390, 546, 1623, 2040
Bme18I	GGWCC	3 cut(s)	207, 305, 1135
BmeRI	GACNNNNNGTC	1 cut(s)	904
BmeT110I	CYCGRG	1 cut(s)	1703
BmgBI	CACGTC	1 cut(s)	274
BmgT120I	GGNCC	5 cut(s)	207, 305, 461, 1135, 2010
BmiI	GGNNCC	6 cut(s)	312, 534, 854, 1137, 1196, 2166
BmrFI	CCNGG	5 cut(s)	179, 390, 546, 1623, 2040
BmrI	ACTGGG	1 cut(s)	2007
BmsI	GCATC	3 cut(s)	479, 1051, 2083
BmuI	ACTGGG	1 cut(s)	2007
BpiI	GAAGAC	2 cut(s)	1022, 1806
BpmI	CTGGAG	5 cut(s)	450, 767, 1221, 1230, 1287
Bpu1102I	GCTNAGC	2 cut(s)	323, 1891
BpuEI	CTTGAG	1 cut(s)	1720
BpuMI	CCSGG	2 cut(s)	179, 2040
BsaAI	YACGTR	1 cut(s)	1094
BsaBI	GATNNNNATC	1 cut(s)	573
BsaHI	GRCGYC	3 cut(s)	59, 252, 354
BsaI	GGTCTC	1 cut(s)	912
BsaJI	CCNNGG	6 cut(s)	54, 178, 694, 939, 2058, 2185
BsaWI	WCCGGW	2 cut(s)	670, 903
BsaXI	ACNNNNNCTCC	8 cut(s)	108, 138, 252, 282, 1272, 1302, 1625, 1655
Bse118I	RCCGGY	1 cut(s)	962
Bse1I	ACTGG	7 cut(s)	373, 1213, 1238, 1270, 1359, 1572, 2013
Bse3DI	GCAATG	1 cut(s)	2145
Bse8I	GATNNNNATC	1 cut(s)	573
BseAI	TCCGGA	1 cut(s)	670
BseBI	CCWGG	3 cut(s)	390, 546, 1623
BseDI	CCNNGG	6 cut(s)	54, 178, 694, 939, 2058, 2185
BseGI	GGATG	6 cut(s)	385, 679, 1042, 1888, 2032, 2098
BseJI	GATNNNNATC	1 cut(s)	573
BseMI	GCAATG	1 cut(s)	2145
BseMII	CTCAG	3 cut(s)	337, 1008, 1044
BseNI	ACTGG	7 cut(s)	373, 1213, 1238, 1270, 1359, 1572, 2013
BseXI	GCAGC	8 cut(s)	536, 700, 703, 849, 922, 1534, 1561, 2213
BseYI	CCCAGC	1 cut(s)	877
BsgI	GTGCAG	3 cut(s)	214, 543, 1365
BshFI	GGCC	6 cut(s)	68, 293, 463, 999, 1068, 2011
BshNI	GGYRCC	3 cut(s)	532, 852, 2164
BsiHKAI	GWGCWC	1 cut(s)	703
BsiHKCI	CYCGRG	1 cut(s)	1703
BsiSI	CCGG	9 cut(s)	82, 93, 178, 308, 314, 671, 904, 963, 2039
BslFI	GGGAC	2 cut(s)	497, 1121
BsmAI	GTCTC	8 cut(s)	28, 211, 912, 997, 1256, 1275, 1586, 1784
BsmBI	CGTCTC	1 cut(s)	28
BsmFI	GGGAC	2 cut(s)	497, 1121
BsmI	GAATGC	1 cut(s)	17
BsnI	GGCC	6 cut(s)	68, 293, 463, 999, 1068, 2011
Bso31I	GGTCTC	1 cut(s)	912
BsoBI	CYCGRG	1 cut(s)	1703
Bsp1286I	GDGCHC	1 cut(s)	703
Bsp13I	TCCGGA	1 cut(s)	670
Bsp143I	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
Bsp1720I	GCTNAGC	2 cut(s)	323, 1891
Bsp19I	CCATGG	2 cut(s)	54, 2058
BspACI	CCGC	9 cut(s)	15, 79, 146, 210, 282, 357, 923, 1571, 1661
BspANI	GGCC	6 cut(s)	68, 293, 463, 999, 1068, 2011
BspCNI	CTCAG	3 cut(s)	336, 1007, 1045
BspEI	TCCGGA	1 cut(s)	670
BspHI	TCATGA	2 cut(s)	201, 1846
BspLI	GGNNCC	6 cut(s)	312, 534, 854, 1137, 1196, 2166
BspMI	ACCTGC	2 cut(s)	1385, 2203
BspPI	GGATC	3 cut(s)	206, 1298, 1917
BspT107I	GGYRCC	3 cut(s)	532, 852, 2164
BspTNI	GGTCTC	1 cut(s)	912
BsrDI	GCAATG	1 cut(s)	2145
BsrFI	RCCGGY	1 cut(s)	962
BsrI	ACTGG	7 cut(s)	373, 1213, 1238, 1270, 1359, 1572, 2013
BssAI	RCCGGY	1 cut(s)	962
BssECI	CCNNGG	6 cut(s)	54, 178, 694, 939, 2058, 2185
BssMI	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
BssNI	GRCGYC	3 cut(s)	59, 252, 354
BssT1I	CCWWGG	4 cut(s)	54, 694, 939, 2058
Bst2UI	CCWGG	3 cut(s)	390, 546, 1623
Bst4CI	ACNGT	8 cut(s)	73, 235, 959, 970, 991, 1286, 1537, 2047
Bst6I	CTCTTC	1 cut(s)	2240
BstACI	GRCGYC	3 cut(s)	59, 252, 354
BstBAI	YACGTR	1 cut(s)	1094
BstC8I	GCNNGC	7 cut(s)	98, 193, 378, 964, 1233, 1295, 2176
BstDEI	CTNAG	4 cut(s)	323, 994, 1053, 1891
BstDSI	CCRYGG	3 cut(s)	54, 2058, 2185
BstENI	CCTNNNNNAGG	1 cut(s)	1143
BstF5I	GGATG	6 cut(s)	385, 679, 1042, 1888, 2032, 2098
BstHHI	GCGC	1 cut(s)	376
BstKTI	GATC	9 cut(s)	131, 201, 577, 1075, 1306, 1641, 1846, 1912, 2027
BstMAI	GTCTC	8 cut(s)	28, 211, 912, 997, 1256, 1275, 1586, 1784
BstMBI	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
BstMWI	GCNNNNNNNGC	8 cut(s)	65, 290, 932, 941, 1160, 1568, 2060, 2171
BstNI	CCWGG	3 cut(s)	390, 546, 1623
BstNSI	RCATGY	4 cut(s)	1235, 1297, 1581, 2156
BstSCI	CCNGG	5 cut(s)	177, 388, 544, 1621, 2038
BstV1I	GCAGC	8 cut(s)	536, 700, 703, 849, 922, 1534, 1561, 2213
BstV2I	GAAGAC	2 cut(s)	1022, 1806
BstX2I	RGATCY	1 cut(s)	1072
BstXI	CCANNNNNNTGG	1 cut(s)	791
BstYI	RGATCY	1 cut(s)	1072
BsuRI	GGCC	6 cut(s)	68, 293, 463, 999, 1068, 2011
BtgI	CCRYGG	3 cut(s)	54, 2058, 2185
BtrI	CACGTC	1 cut(s)	274
BtsCI	GGATG	6 cut(s)	385, 679, 1042, 1888, 2032, 2098
BtsI	GCAGTG	2 cut(s)	1735, 2233
BtsIMutI	CAGTG	8 cut(s)	69, 964, 975, 1291, 1352, 1542, 1735, 2233
BveI	ACCTGC	2 cut(s)	1385, 2203
Cac8I	GCNNGC	7 cut(s)	98, 193, 378, 964, 1233, 1295, 2176
CaiI	CAGNNNCTG	1 cut(s)	473
CciI	TCATGA	2 cut(s)	201, 1846
CfoI	GCGC	1 cut(s)	376
Cfr10I	RCCGGY	1 cut(s)	962
Cfr13I	GGNCC	5 cut(s)	207, 305, 461, 1135, 2010
CpoI	CGGWCCG	1 cut(s)	305
CseI	GACGC	4 cut(s)	48, 260, 362, 492
Csp6I	GTAC	5 cut(s)	366, 533, 842, 1184, 1400
CspCI	CAANNNNNGTGG	2 cut(s)	2085, 2120
CspI	CGGWCCG	1 cut(s)	305
CviQI	GTAC	5 cut(s)	366, 533, 842, 1184, 1400
DdeI	CTNAG	4 cut(s)	323, 994, 1053, 1891
DpnI	GATC	9 cut(s)	130, 200, 576, 1074, 1305, 1640, 1845, 1911, 2026
DpnII	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
DraI	TTTAAA	1 cut(s)	1489
DraIII	CACNNNGTG	1 cut(s)	707
DrdI	GACNNNNNNGTC	1 cut(s)	1502
DriI	GACNNNNNGTC	1 cut(s)	904
DseDI	GACNNNNNNGTC	1 cut(s)	1502
EaeI	YGGCCR	2 cut(s)	66, 1066
Eam1104I	CTCTTC	1 cut(s)	2240
Eam1105I	GACNNNNNGTC	1 cut(s)	904
EarI	CTCTTC	1 cut(s)	2240
EciI	GGCGGA	3 cut(s)	68, 271, 1650
Eco130I	CCWWGG	4 cut(s)	54, 694, 939, 2058
Eco31I	GGTCTC	1 cut(s)	912
Eco32I	GATATC	2 cut(s)	551, 608
Eco47I	GGWCC	3 cut(s)	207, 305, 1135
Eco57I	CTGAAG	3 cut(s)	1016, 1385, 2221
Eco88I	CYCGRG	1 cut(s)	1703
EcoNI	CCTNNNNNAGG	1 cut(s)	1143
EcoO109I	RGGNCCY	1 cut(s)	1135
EcoRI	GAATTC	1 cut(s)	225
EcoRII	CCWGG	3 cut(s)	388, 544, 1621
EcoRV	GATATC	2 cut(s)	551, 608
EcoT14I	CCWWGG	4 cut(s)	54, 694, 939, 2058
EcoT22I	ATGCAT	1 cut(s)	1299
ErhI	CCWWGG	4 cut(s)	54, 694, 939, 2058
Esp3I	CGTCTC	1 cut(s)	28
FalI	AAGNNNNNCTT	6 cut(s)	678, 710, 1182, 1214, 1358, 1390
FaqI	GGGAC	2 cut(s)	497, 1121
FauNDI	CATATG	1 cut(s)	1646
FbaI	TGATCA	1 cut(s)	1843
FokI	GGATG	6 cut(s)	372, 686, 1029, 1895, 2019, 2105
FspBI	CTAG	3 cut(s)	1551, 1686, 2198
FspI	TGCGCA	1 cut(s)	375
GlaI	GCGC	1 cut(s)	375
GsaI	CCCAGC	1 cut(s)	881
GsuI	CTGGAG	5 cut(s)	450, 767, 1221, 1230, 1287
HaeIII	GGCC	6 cut(s)	68, 293, 463, 999, 1068, 2011
HapII	CCGG	9 cut(s)	82, 93, 178, 308, 314, 671, 904, 963, 2039
HgaI	GACGC	4 cut(s)	48, 260, 362, 492
HhaI	GCGC	1 cut(s)	376
Hin1I	GRCGYC	3 cut(s)	59, 252, 354
Hin6I	GCGC	1 cut(s)	374
HinP1I	GCGC	1 cut(s)	374
HincII	GTYRAC	1 cut(s)	1507
HindII	GTYRAC	1 cut(s)	1507
HindIII	AAGCTT	1 cut(s)	1319
HinfI	GANTC	6 cut(s)	140, 153, 163, 219, 346, 1671
HpaII	CCGG	9 cut(s)	82, 93, 178, 308, 314, 671, 904, 963, 2039
HphI	GGTGA	4 cut(s)	18, 503, 1236, 1853
Hpy166II	GTNNAC	5 cut(s)	733, 1400, 1507, 1900, 2185
Hpy188III	TCNNGA	8 cut(s)	157, 202, 350, 671, 784, 1442, 1847, 1976
Hpy8I	GTNNAC	5 cut(s)	733, 1400, 1507, 1900, 2185
Hpy99I	CGWCG	4 cut(s)	239, 254, 290, 346
HpyAV	CCTTC	7 cut(s)	700, 843, 1124, 1208, 1360, 1900, 2105
HpyCH4III	ACNGT	8 cut(s)	73, 235, 959, 970, 991, 1286, 1537, 2047
HpyCH4IV	ACGT	3 cut(s)	273, 706, 1093
HpyF10VI	GCNNNNNNNGC	8 cut(s)	65, 290, 932, 941, 1160, 1568, 2060, 2171
HpyF3I	CTNAG	4 cut(s)	323, 994, 1053, 1891
HpySE526I	ACGT	3 cut(s)	273, 706, 1093
Hsp92I	GRCGYC	3 cut(s)	59, 252, 354
HspAI	GCGC	1 cut(s)	374
Kpn2I	TCCGGA	1 cut(s)	670
KpnI	GGTACC	1 cut(s)	536
KroI	GCCGGC	1 cut(s)	962
KroNI	GCCGGC	1 cut(s)	964
Ksp22I	TGATCA	1 cut(s)	1843
Kzo9I	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
LmnI	GCTCC	7 cut(s)	273, 316, 698, 886, 1240, 1776, 2149
Lsp1109I	GCAGC	8 cut(s)	536, 700, 703, 849, 922, 1534, 1561, 2213
LweI	GCATC	3 cut(s)	479, 1051, 2083
MaeI	CTAG	3 cut(s)	1551, 1686, 2198
MaeII	ACGT	3 cut(s)	273, 706, 1093
MaeIII	GTNAC	3 cut(s)	1048, 1128, 1941
MalI	GATC	9 cut(s)	130, 200, 576, 1074, 1305, 1640, 1845, 1911, 2026
MboI	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
MflI	RGATCY	1 cut(s)	1072
MhlI	GDGCHC	1 cut(s)	703
MlsI	TGGCCA	2 cut(s)	68, 1068
MluNI	TGGCCA	2 cut(s)	68, 1068
MlyI	GAGTC	3 cut(s)	134, 213, 1680
MmeI	TCCRAC	2 cut(s)	162, 441
Mox20I	TGGCCA	2 cut(s)	68, 1068
Mph1103I	ATGCAT	1 cut(s)	1299
MroI	TCCGGA	1 cut(s)	670
MroNI	GCCGGC	1 cut(s)	962
MroXI	GAANNNNTTC	2 cut(s)	1113, 1617
MscI	TGGCCA	2 cut(s)	68, 1068
MseI	TTAA	5 cut(s)	617, 1488, 1824, 2088, 2244
MslI	CAYNNNNRTG	4 cut(s)	636, 807, 822, 1016
Msp20I	TGGCCA	2 cut(s)	68, 1068
MspA1I	CMGCKG	1 cut(s)	2204
MspI	CCGG	9 cut(s)	82, 93, 178, 308, 314, 671, 904, 963, 2039
MspR9I	CCNGG	5 cut(s)	179, 390, 546, 1623, 2040
Mva1269I	GAATGC	1 cut(s)	17
MvaI	CCWGG	3 cut(s)	390, 546, 1623
MwoI	GCNNNNNNNGC	8 cut(s)	65, 290, 932, 941, 1160, 1568, 2060, 2171
NaeI	GCCGGC	1 cut(s)	964
NciI	CCSGG	2 cut(s)	179, 2040
NcoI	CCATGG	2 cut(s)	54, 2058
NdeI	CATATG	1 cut(s)	1646
NdeII	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
NgoMIV	GCCGGC	1 cut(s)	962
NlaIV	GGNNCC	6 cut(s)	312, 534, 854, 1137, 1196, 2166
NmeAIII	GCCGAG	1 cut(s)	298
NmuCI	GTSAC	3 cut(s)	1048, 1128, 1941
NsbI	TGCGCA	1 cut(s)	375
NsiI	ATGCAT	1 cut(s)	1299
NspI	RCATGY	4 cut(s)	1235, 1297, 1581, 2156
PaeI	GCATGC	2 cut(s)	1235, 1297
PaeR7I	CTCGAG	1 cut(s)	1703
PagI	TCATGA	2 cut(s)	201, 1846
PaqCI	CACCTGC	1 cut(s)	1385
PctI	GAATGC	1 cut(s)	17
PdiI	GCCGGC	1 cut(s)	964
PdmI	GAANNNNTTC	2 cut(s)	1113, 1617
PfeI	GAWTC	3 cut(s)	153, 163, 346
PflMI	CCANNNNNTGG	2 cut(s)	55, 632
PfoI	TCCNGGA	2 cut(s)	1621, 2038
PleI	GAGTC	3 cut(s)	134, 213, 1679
PpsI	GAGTC	3 cut(s)	134, 213, 1679
Ppu21I	YACGTR	1 cut(s)	1094
PpuMI	RGGWCCY	1 cut(s)	1135
Psp5II	RGGWCCY	1 cut(s)	1135
Psp6I	CCWGG	3 cut(s)	388, 544, 1621
PspFI	CCCAGC	1 cut(s)	877
PspGI	CCWGG	3 cut(s)	388, 544, 1621
PspN4I	GGNNCC	6 cut(s)	312, 534, 854, 1137, 1196, 2166
PspPI	GGNCC	5 cut(s)	207, 305, 461, 1135, 2010
PspPPI	RGGWCCY	1 cut(s)	1135
PspXI	VCTCGAGB	1 cut(s)	1703
PstNI	CAGNNNCTG	1 cut(s)	473
PsuI	RGATCY	1 cut(s)	1072
PvuII	CAGCTG	1 cut(s)	2204
RsaI	GTAC	5 cut(s)	367, 534, 843, 1185, 1401
RsaNI	GTAC	5 cut(s)	366, 533, 842, 1184, 1400
RseI	CAYNNNNRTG	4 cut(s)	636, 807, 822, 1016
Rsr2I	CGGWCCG	1 cut(s)	305
RsrII	CGGWCCG	1 cut(s)	305
SaqAI	TTAA	5 cut(s)	617, 1488, 1824, 2088, 2244
Sau3AI	GATC	9 cut(s)	128, 198, 574, 1072, 1303, 1638, 1843, 1909, 2024
Sau96I	GGNCC	5 cut(s)	207, 305, 461, 1135, 2010
SchI	GAGTC	3 cut(s)	134, 213, 1680
ScrFI	CCNGG	5 cut(s)	179, 390, 546, 1623, 2040
SduI	GDGCHC	1 cut(s)	703
SfaNI	GCATC	3 cut(s)	479, 1051, 2083
Sfr274I	CTCGAG	1 cut(s)	1703
SinI	GGWCC	3 cut(s)	207, 305, 1135
SlaI	CTCGAG	1 cut(s)	1703
SmiMI	CAYNNNNRTG	4 cut(s)	636, 807, 822, 1016
SmlI	CTYRAG	2 cut(s)	1703, 1735
SmoI	CTYRAG	2 cut(s)	1703, 1735
SphI	GCATGC	2 cut(s)	1235, 1297
SsiI	CCGC	9 cut(s)	15, 79, 146, 210, 282, 357, 923, 1571, 1661
SspMI	CTAG	3 cut(s)	1551, 1686, 2198
StyD4I	CCNGG	5 cut(s)	177, 388, 544, 1621, 2038
StyI	CCWWGG	4 cut(s)	54, 694, 939, 2058
TaaI	ACNGT	8 cut(s)	73, 235, 959, 970, 991, 1286, 1537, 2047
TaiI	ACGT	3 cut(s)	276, 709, 1096
TaqI	TCGA	7 cut(s)	156, 344, 867, 984, 1255, 1704, 1904
TaqII	GACCGA	1 cut(s)	293
TauI	GCSGC	4 cut(s)	148, 359, 926, 1574
TfiI	GAWTC	3 cut(s)	153, 163, 346
Tru1I	TTAA	5 cut(s)	617, 1488, 1824, 2088, 2244
Tru9I	TTAA	5 cut(s)	617, 1488, 1824, 2088, 2244
TscAI	CASTG	8 cut(s)	69, 964, 975, 1291, 1359, 1542, 1735, 2233
TseFI	GTSAC	3 cut(s)	1048, 1128, 1941
TseI	GCWGC	8 cut(s)	524, 713, 716, 837, 935, 1547, 1574, 2201
Tsp45I	GTSAC	3 cut(s)	1048, 1128, 1941
TspRI	CASTG	8 cut(s)	69, 964, 975, 1291, 1359, 1542, 1735, 2233
Van91I	CCANNNNNTGG	2 cut(s)	55, 632
VpaK11BI	GGWCC	3 cut(s)	207, 305, 1135
XagI	CCTNNNNNAGG	1 cut(s)	1143
XapI	RAATTY	4 cut(s)	225, 974, 1445, 1597
XceI	RCATGY	4 cut(s)	1235, 1297, 1581, 2156
XcmI	CCANNNNNNNNNTGG	4 cut(s)	61, 392, 484, 2065
XhoI	CTCGAG	1 cut(s)	1703
XmnI	GAANNNNTTC	2 cut(s)	1113, 1617
XspI	CTAG	3 cut(s)	1551, 1686, 2198
Zsp2I	ATGCAT	1 cut(s)	1299

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.