Rmu_sc0015604.1_g000002

Protein UNUSUAL FLORAL

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015604.1
Physical Location & Seq
Forward (+)
9994 .. 11940
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015604.1_g000002.1.cds

Sequence Viewer

Length: 1215 bp
atgtggagcgacctcccctttgatcttctctccaacatcttcttcttcctctcccccgactcttttgcttgcgccaaggcagcatgtcgaaactggcatcaagcttgtgcctccacaccgagctttaagaacccctttttgttgcagaagcaacttcaccctccatggttcatagcattgcctcttcgaaacaacagcctctcttgctatgctcacaatccaatcaacaccaccaacaacaactggtatgaaatttctttagatttcttaccccacccaattcgtctcgtggctcacttagaaggcctcctcttggtccgaccctcgatctctaccgttctccaattgggtgtctgcaacccatttacaaggcaatacaagcagcttccgacattaaacatcagaagaaccaacccggccgtgggggtgatatcactcccagcattttcaaacactaaattaaagttcggaacagattcatttcattgcttcggaatctacgtggctggtgggatgtcggaggcgccccgcggcggcgccacgtacgagccgacgctggaaatgtacgaccctcaactcggcgcgtggcgagttgtcgggtcgatgccgatggagtttgcagtgaggctaacagtctggactccaaaggagagtgtgtactgtgatggggtgctgtattggatgacctctgccagggcatacagcttaatggggtgtgacatttcttctaacagttggagagagctgagcgtgccaatggcggacaagctggagtttgctgtgctggttctgcgcaatgggaggcttacacttgtgggagggacatgtgctttgggggtttgtatatgggagcttggtgagggagagagttgggtgatggttgagacggttcctagtgaattggggatgaggtttataggggagaagggaagttgggatagaacaaagtgtgtggggagtgatggggctatttacttgtatagggacctttgggcaggaatggtggtttggagggaagttggagaagggaatactaagtgggaatggttttggattgaagggtgttcgtcgattagagcatctgatcctgaaattgttgataaggatgtcaatgtgcagatggcggacagcgaggctactcaattggtggagtctactgctgcggaggaaacggtggaatgtgatgtgtcacattctactgatagtctagtttaa

Protein Analysis

404

Amino Acids

45.15

Weight (kDa)

5.12

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016893)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g30250
malus_domestica MD17G1206200.v1.1
prunus_persica Prupe.3G081200_v2.0.a1
pyrus_communis pycom17g20940
rosa_chinensis RchiOBHm_Chr2g0136491
rosa_laevigata RLG00000019536
rosa_multiflora Rmu_sc0015604.1_g000002
rosa_roxburghii Rroxscaffold_2G00108240
rosa_rugosa Rorug02G0331300
rosa_samantha Rh2AG382100 Rh2BG388700 Rh2CG368400 Rh2DG405400
rosa_wichuraiana Rw2G031230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 794
AccB1I GGYRCC 2 cut(s) 523, 536
AccI GTMKAC 1 cut(s) 1154
AccII CGCG 2 cut(s) 531, 584
AciI CCGC 6 cut(s) 529, 531, 534, 761, 1124, 1163
AclWI GGATC 1 cut(s) 1079
AcoI YGGCCR 1 cut(s) 417
AcsI RAATTY 1 cut(s) 252
AcyI GRCGYC 2 cut(s) 524, 537
AfaI GTAC 3 cut(s) 545, 566, 659
AfiI CCNNNNNNNGG 6 cut(s) 313, 421, 422, 533, 578, 693
AflIII ACRYGT 1 cut(s) 824
AgsI TTSAA 2 cut(s) 450, 1058
AjnI CCWGG 1 cut(s) 692
AjuI GAANNNNNNNTTGG 4 cut(s) 26, 58, 991, 1023
AluBI AGCT 7 cut(s) 104, 123, 385, 705, 745, 769, 853
AluI AGCT 7 cut(s) 104, 123, 385, 705, 745, 769, 853
Alw26I GTCTC 2 cut(s) 290, 878
AlwI GGATC 1 cut(s) 1079
AoxI GGCC 2 cut(s) 304, 417
ApeKI GCWGC 3 cut(s) 80, 382, 1160
ApoI RAATTY 1 cut(s) 252
ArsI GACNNNNNNTTYG 3 cut(s) 34, 814, 846
Asp700I GAANNNNTTC 1 cut(s) 475
AspLEI GCGC 5 cut(s) 74, 526, 539, 584, 795
AspS9I GGNCC 2 cut(s) 316, 985
AsuC2I CCSGG 1 cut(s) 416
AsuHPI GGTGA 4 cut(s) 149, 439, 869, 886
AsuII TTCGAA 1 cut(s) 187
AvaII GGWCC 2 cut(s) 316, 985
BanI GGYRCC 2 cut(s) 523, 536
BauI CACGAG 1 cut(s) 287
BbvI GCAGC 3 cut(s) 92, 394, 1147
BccI CCATC 5 cut(s) 604, 659, 871, 956, 1114
BceAI ACGGC 1 cut(s) 404
BcgI CGANNNNNNTGC 2 cut(s) 47, 81
BciT130I CCWGG 1 cut(s) 694
BcnI CCSGG 1 cut(s) 416
BcoDI GTCTC 2 cut(s) 290, 878
BfaI CTAG 2 cut(s) 894, 1208
BfoI RGCGCY 2 cut(s) 527, 540
BisI GCNGC 5 cut(s) 81, 383, 532, 535, 1161
BlpI GCTNAGC 1 cut(s) 746
BlsI GCNGC 5 cut(s) 82, 384, 533, 536, 1162
Bme1390I CCNGG 2 cut(s) 416, 694
Bme18I GGWCC 2 cut(s) 316, 985
BmgT120I GGNCC 2 cut(s) 316, 985
BmiI GGNNCC 4 cut(s) 525, 538, 891, 986
BmrFI CCNGG 2 cut(s) 416, 694
BmsI GCATC 3 cut(s) 106, 594, 1088
BpmI CTGGAG 1 cut(s) 791
Bpu1102I GCTNAGC 1 cut(s) 746
Bpu14I TTCGAA 1 cut(s) 187
BpuMI CCSGG 1 cut(s) 416
BsaAI YACGTR 2 cut(s) 502, 543
BsaHI GRCGYC 2 cut(s) 524, 537
BsaJI CCNNGG 5 cut(s) 75, 164, 420, 529, 693
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 6 cut(s) 313, 421, 422, 533, 578, 693
Bse1I ACTGG 2 cut(s) 98, 248
Bse3DI GCAATG 3 cut(s) 176, 484, 802
BseBI CCWGG 1 cut(s) 694
BseDI CCNNGG 5 cut(s) 75, 164, 420, 529, 693
BseGI GGATG 4 cut(s) 519, 687, 912, 1111
BseLI CCNNNNNNNGG 6 cut(s) 313, 421, 422, 533, 578, 693
BseMI GCAATG 3 cut(s) 176, 484, 802
BseMII CTCAG 1 cut(s) 737
BseNI ACTGG 2 cut(s) 98, 248
BseRI GAGGAG 1 cut(s) 299
BseX3I CGGCCG 1 cut(s) 417
BseXI GCAGC 3 cut(s) 92, 394, 1147
BseYI CCCAGC 1 cut(s) 439
BsgI GTGCAG 1 cut(s) 1136
Bsh1236I CGCG 2 cut(s) 531, 584
Bsh1285I CGRYCG 1 cut(s) 420
BshFI GGCC 2 cut(s) 306, 419
BshNI GGYRCC 2 cut(s) 523, 536
BsiEI CGRYCG 1 cut(s) 420
BsiSI CCGG 1 cut(s) 416
BsiWI CGTACG 1 cut(s) 543
BslFI GGGAC 2 cut(s) 835, 998
BslI CCNNNNNNNGG 6 cut(s) 313, 421, 422, 533, 578, 693
BsmAI GTCTC 2 cut(s) 290, 878
BsmBI CGTCTC 2 cut(s) 290, 878
BsmFI GGGAC 2 cut(s) 835, 998
BsnI GGCC 2 cut(s) 306, 419
Bsp119I TTCGAA 1 cut(s) 187
Bsp143I GATC 3 cut(s) 22, 327, 1084
Bsp1720I GCTNAGC 1 cut(s) 746
Bsp19I CCATGG 1 cut(s) 164
BspACI CCGC 6 cut(s) 529, 531, 534, 761, 1124, 1163
BspANI GGCC 2 cut(s) 306, 419
BspCNI CTCAG 1 cut(s) 738
BspFNI CGCG 2 cut(s) 531, 584
BspLI GGNNCC 4 cut(s) 525, 538, 891, 986
BspPI GGATC 1 cut(s) 1079
BspT104I TTCGAA 1 cut(s) 187
BspT107I GGYRCC 2 cut(s) 523, 536
BsrDI GCAATG 3 cut(s) 176, 484, 802
BsrI ACTGG 2 cut(s) 98, 248
BssECI CCNNGG 5 cut(s) 75, 164, 420, 529, 693
BssMI GATC 3 cut(s) 22, 327, 1084
BssNI GRCGYC 2 cut(s) 524, 537
BssSI CACGAG 1 cut(s) 287
BssT1I CCWWGG 2 cut(s) 75, 164
Bst2BI CACGAG 1 cut(s) 287
Bst2UI CCWGG 1 cut(s) 694
Bst4CI ACNGT 6 cut(s) 337, 634, 662, 734, 889, 1174
Bst6I CTCTTC 1 cut(s) 189
BstACI GRCGYC 2 cut(s) 524, 537
BstBAI YACGTR 2 cut(s) 502, 543
BstBI TTCGAA 1 cut(s) 187
BstC8I GCNNGC 2 cut(s) 70, 752
BstDEI CTNAG 3 cut(s) 298, 746, 1035
BstDSI CCRYGG 3 cut(s) 164, 420, 529
BstENI CCTNNNNNAGG 1 cut(s) 691
BstF5I GGATG 4 cut(s) 519, 687, 912, 1111
BstFNI CGCG 2 cut(s) 531, 584
BstH2I RGCGCY 2 cut(s) 527, 540
BstHHI GCGC 5 cut(s) 74, 526, 539, 584, 795
BstKTI GATC 3 cut(s) 25, 330, 1087
BstMAI GTCTC 2 cut(s) 290, 878
BstMBI GATC 3 cut(s) 22, 327, 1084
BstMCI CGRYCG 1 cut(s) 420
BstMWI GCNNNNNNNGC 5 cut(s) 80, 204, 379, 751, 790
BstNI CCWGG 1 cut(s) 694
BstNSI RCATGY 2 cut(s) 87, 828
BstSCI CCNGG 2 cut(s) 414, 692
BstUI CGCG 2 cut(s) 531, 584
BstV1I GCAGC 3 cut(s) 92, 394, 1147
BstZI CGGCCG 1 cut(s) 417
BsuRI GGCC 2 cut(s) 306, 419
BtgI CCRYGG 3 cut(s) 164, 420, 529
BtsCI GGATG 4 cut(s) 519, 687, 912, 1111
BtsI GCAGTG 1 cut(s) 627
BtsIMutI CAGTG 1 cut(s) 627
Cac8I GCNNGC 2 cut(s) 70, 752
CfoI GCGC 5 cut(s) 74, 526, 539, 584, 795
Cfr13I GGNCC 2 cut(s) 316, 985
Cfr42I CCGCGG 1 cut(s) 532
CseI GACGC 1 cut(s) 562
Csp6I GTAC 3 cut(s) 544, 565, 658
CspCI CAANNNNNGTGG 2 cut(s) 933, 968
CviAII CATG 3 cut(s) 84, 165, 825
CviQI GTAC 3 cut(s) 544, 565, 658
DdeI CTNAG 3 cut(s) 298, 746, 1035
DinI GGCGCC 2 cut(s) 525, 538
DpnI GATC 3 cut(s) 24, 329, 1086
DpnII GATC 3 cut(s) 22, 327, 1084
EaeI YGGCCR 1 cut(s) 417
EagI CGGCCG 1 cut(s) 417
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
EciI GGCGGA 2 cut(s) 776, 1139
EclXI CGGCCG 1 cut(s) 417
Eco130I CCWWGG 2 cut(s) 75, 164
Eco147I AGGCCT 1 cut(s) 306
Eco32I GATATC 1 cut(s) 432
Eco47I GGWCC 2 cut(s) 316, 985
Eco52I CGGCCG 1 cut(s) 417
EcoNI CCTNNNNNAGG 1 cut(s) 691
EcoO109I RGGNCCY 1 cut(s) 985
EcoRII CCWGG 1 cut(s) 692
EcoRV GATATC 1 cut(s) 432
EcoT14I CCWWGG 2 cut(s) 75, 164
EgeI GGCGCC 2 cut(s) 525, 538
EheI GGCGCC 2 cut(s) 525, 538
ErhI CCWWGG 2 cut(s) 75, 164
Esp3I CGTCTC 2 cut(s) 290, 878
FaeI CATG 3 cut(s) 87, 168, 828
FalI AAGNNNNNCTT 2 cut(s) 119, 151
FaqI GGGAC 2 cut(s) 835, 998
FatI CATG 3 cut(s) 83, 164, 824
FauI CCCGC 1 cut(s) 536
FblI GTMKAC 1 cut(s) 1154
Fnu4HI GCNGC 5 cut(s) 81, 383, 532, 535, 1161
FokI GGATG 4 cut(s) 526, 694, 919, 1118
Fsp4HI GCNGC 5 cut(s) 81, 383, 532, 535, 1161
FspBI CTAG 2 cut(s) 894, 1208
FspI TGCGCA 1 cut(s) 794
GlaI GCGC 5 cut(s) 73, 525, 538, 583, 794
GluI GCNGC 5 cut(s) 81, 383, 532, 535, 1161
GsaI CCCAGC 1 cut(s) 443
GsuI CTGGAG 1 cut(s) 791
HaeII RGCGCY 2 cut(s) 527, 540
HaeIII GGCC 2 cut(s) 306, 419
HapII CCGG 1 cut(s) 416
HgaI GACGC 1 cut(s) 562
HhaI GCGC 5 cut(s) 74, 526, 539, 584, 795
Hin1I GRCGYC 2 cut(s) 524, 537
Hin1II CATG 3 cut(s) 87, 168, 828
Hin6I GCGC 5 cut(s) 72, 524, 537, 582, 793
HinP1I GCGC 5 cut(s) 72, 524, 537, 582, 793
HindIII AAGCTT 1 cut(s) 102
HinfI GANTC 5 cut(s) 59, 476, 495, 640, 1151
HpaII CCGG 1 cut(s) 416
HphI GGTGA 4 cut(s) 149, 439, 869, 886
Hpy166II GTNNAC 2 cut(s) 658, 1155
Hpy188I TCNGA 7 cut(s) 320, 390, 404, 470, 494, 520, 1084
Hpy188III TCNNGA 2 cut(s) 637, 1088
Hpy8I GTNNAC 2 cut(s) 658, 1155
Hpy99I CGWCG 2 cut(s) 556, 1072
HpyAV CCTTC 4 cut(s) 296, 919, 1019, 1052
HpyCH4III ACNGT 6 cut(s) 337, 634, 662, 734, 889, 1174
HpyCH4IV ACGT 2 cut(s) 501, 542
HpyCH4V TGCA 4 cut(s) 145, 357, 620, 1117
HpyF10VI GCNNNNNNNGC 5 cut(s) 80, 204, 379, 751, 790
HpyF3I CTNAG 3 cut(s) 298, 746, 1035
HpySE526I ACGT 2 cut(s) 501, 542
Hsp92I GRCGYC 2 cut(s) 524, 537
Hsp92II CATG 3 cut(s) 87, 168, 828
HspAI GCGC 5 cut(s) 72, 524, 537, 582, 793
KasI GGCGCC 2 cut(s) 523, 536
KspI CCGCGG 1 cut(s) 532
Kzo9I GATC 3 cut(s) 22, 327, 1084
LmnI GCTCC 2 cut(s) 6, 850
Lsp1109I GCAGC 3 cut(s) 92, 394, 1147
LweI GCATC 3 cut(s) 106, 594, 1088
MaeI CTAG 2 cut(s) 894, 1208
MaeII ACGT 2 cut(s) 501, 542
MaeIII GTNAC 2 cut(s) 716, 1188
MalI GATC 3 cut(s) 24, 329, 1086
MboI GATC 3 cut(s) 22, 327, 1084
MboII GAAGA 7 cut(s) 17, 31, 34, 37, 176, 417, 717
MfeI CAATTG 2 cut(s) 344, 1142
MluCI AATT 7 cut(s) 252, 279, 344, 458, 899, 1092, 1142
Mly113I GGCGCC 2 cut(s) 524, 537
MlyI GAGTC 3 cut(s) 53, 634, 1160
MmeI TCCRAC 6 cut(s) 57, 343, 413, 498, 716, 1000
MroXI GAANNNNTTC 1 cut(s) 475
MseI TTAA 5 cut(s) 126, 395, 461, 707, 1213
MspA1I CMGCKG 1 cut(s) 531
MspI CCGG 1 cut(s) 416
MspR9I CCNGG 2 cut(s) 416, 694
MunI CAATTG 2 cut(s) 344, 1142
MvaI CCWGG 1 cut(s) 694
MvnI CGCG 2 cut(s) 531, 584
MwoI GCNNNNNNNGC 5 cut(s) 80, 204, 379, 751, 790
NarI GGCGCC 2 cut(s) 524, 537
NciI CCSGG 1 cut(s) 416
NcoI CCATGG 1 cut(s) 164
NdeII GATC 3 cut(s) 22, 327, 1084
NlaIII CATG 3 cut(s) 87, 168, 828
NlaIV GGNNCC 4 cut(s) 525, 538, 891, 986
NmeAIII GCCGAG 1 cut(s) 558
NmuCI GTSAC 2 cut(s) 716, 1188
NsbI TGCGCA 1 cut(s) 794
NspI RCATGY 2 cut(s) 87, 828
NspV TTCGAA 1 cut(s) 187
PceI AGGCCT 1 cut(s) 306
PciI ACATGT 1 cut(s) 824
PcsI WCGNNNNNNNCGW 2 cut(s) 498, 548
PdmI GAANNNNTTC 1 cut(s) 475
PfeI GAWTC 2 cut(s) 476, 495
Pfl23II CGTACG 1 cut(s) 543
PkrI GCNGC 5 cut(s) 82, 384, 533, 536, 1162
PleI GAGTC 3 cut(s) 53, 634, 1159
PluTI GGCGCC 2 cut(s) 527, 540
PpsI GAGTC 3 cut(s) 53, 634, 1159
Ppu21I YACGTR 2 cut(s) 502, 543
PpuMI RGGWCCY 1 cut(s) 985
PscI ACATGT 1 cut(s) 824
Psp5II RGGWCCY 1 cut(s) 985
Psp6I CCWGG 1 cut(s) 692
PspFI CCCAGC 1 cut(s) 439
PspGI CCWGG 1 cut(s) 692
PspLI CGTACG 1 cut(s) 543
PspN4I GGNNCC 4 cut(s) 525, 538, 891, 986
PspPI GGNCC 2 cut(s) 316, 985
PspPPI RGGWCCY 1 cut(s) 985
RsaI GTAC 3 cut(s) 545, 566, 659
RsaNI GTAC 3 cut(s) 544, 565, 658
SacII CCGCGG 1 cut(s) 532
SaqAI TTAA 5 cut(s) 126, 395, 461, 707, 1213
SatI GCNGC 5 cut(s) 81, 383, 532, 535, 1161
Sau3AI GATC 3 cut(s) 22, 327, 1084
Sau96I GGNCC 2 cut(s) 316, 985
SchI GAGTC 3 cut(s) 53, 634, 1160
ScrFI CCNGG 2 cut(s) 416, 694
SfaNI GCATC 3 cut(s) 106, 594, 1088
SfoI GGCGCC 2 cut(s) 525, 538
Sfr303I CCGCGG 1 cut(s) 532
SfuI TTCGAA 1 cut(s) 187
SgrBI CCGCGG 1 cut(s) 532
SinI GGWCC 2 cut(s) 316, 985
Sse9I AATT 7 cut(s) 252, 279, 344, 458, 899, 1092, 1142
SseBI AGGCCT 1 cut(s) 306
SsiI CCGC 6 cut(s) 529, 531, 534, 761, 1124, 1163
SspDI GGCGCC 2 cut(s) 523, 536
SspMI CTAG 2 cut(s) 894, 1208
StuI AGGCCT 1 cut(s) 306
StyD4I CCNGG 2 cut(s) 414, 692
StyI CCWWGG 2 cut(s) 75, 164
TaaI ACNGT 6 cut(s) 337, 634, 662, 734, 889, 1174
TaiI ACGT 2 cut(s) 504, 545
TaqI TCGA 5 cut(s) 88, 187, 326, 602, 1070
TasI AATT 7 cut(s) 252, 279, 344, 458, 899, 1092, 1142
TatI WGTACW 1 cut(s) 657
TauI GCSGC 2 cut(s) 534, 537
TfiI GAWTC 2 cut(s) 476, 495
Tru1I TTAA 5 cut(s) 126, 395, 461, 707, 1213
Tru9I TTAA 5 cut(s) 126, 395, 461, 707, 1213
TscAI CASTG 1 cut(s) 627
TseFI GTSAC 2 cut(s) 716, 1188
TseI GCWGC 3 cut(s) 80, 382, 1160
Tsp45I GTSAC 2 cut(s) 716, 1188
TspDTI ATGAA 4 cut(s) 160, 264, 468, 473
TspRI CASTG 1 cut(s) 627
VpaK11BI GGWCC 2 cut(s) 316, 985
XagI CCTNNNNNAGG 1 cut(s) 691
XapI RAATTY 1 cut(s) 252
XceI RCATGY 2 cut(s) 87, 828
XcmI CCANNNNNNNNNTGG 1 cut(s) 418
XmiI GTMKAC 1 cut(s) 1154
XmnI GAANNNNTTC 1 cut(s) 475
XspI CTAG 2 cut(s) 894, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.