Pentatricopeptide repeat-containing protein At5g65560-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g41080 FvH4_6g41080 FvH4_6g41080 |
| malus_domestica | MD09G1122300.v1.1 |
| prunus_persica | Prupe.3G201200_v2.0.a1 |
| pyrus_communis | pycom09g04670 |
| rosa_chinensis | RchiOBHm_Chr2g0156641 |
| rosa_laevigata | RLG00000020927 |
| rosa_multiflora | Rmu_sc0018228.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00092880 |
| rosa_rugosa | Rorug02G0454900 |
| rosa_samantha | Rh2AG520600 Rh2BG533700 Rh2CG505600 Rh2DG542500 |
| rosa_wichuraiana | Rw2G042950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 776 |
| AccII | CGCG | 1 cut(s) | 1475 |
| AciI | CCGC | 1 cut(s) | 113 |
| AclI | AACGTT | 2 cut(s) | 885, 1856 |
| AclWI | GGATC | 2 cut(s) | 1068, 1943 |
| AcoI | YGGCCR | 1 cut(s) | 2022 |
| AcsI | RAATTY | 3 cut(s) | 76, 127, 818 |
| AcuI | CTGAAG | 1 cut(s) | 527 |
| AdeI | CACNNNGTG | 2 cut(s) | 269, 1493 |
| AfaI | GTAC | 4 cut(s) | 140, 1129, 1190, 2097 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 871 |
| AflII | CTTAAG | 1 cut(s) | 1361 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 384, 416 |
| AluBI | AGCT | 6 cut(s) | 546, 984, 1503, 1550, 1850, 1963 |
| AluI | AGCT | 6 cut(s) | 546, 984, 1503, 1550, 1850, 1963 |
| Alw21I | GWGCWC | 1 cut(s) | 1822 |
| Alw26I | GTCTC | 5 cut(s) | 378, 523, 657, 2000, 2000 |
| AlwI | GGATC | 2 cut(s) | 1068, 1943 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1998 |
| Ama87I | CYCGRG | 1 cut(s) | 50 |
| AoxI | GGCC | 5 cut(s) | 1108, 1465, 1672, 1700, 2022 |
| ApeKI | GCWGC | 3 cut(s) | 926, 1383, 1960 |
| ApoI | RAATTY | 3 cut(s) | 76, 127, 818 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1007, 1039, 1423, 1455, 1978, 2010 |
| AseI | ATTAAT | 3 cut(s) | 153, 1314, 1916 |
| AspLEI | GCGC | 2 cut(s) | 808, 1477 |
| AspS9I | GGNCC | 2 cut(s) | 647, 1465 |
| AsuHPI | GGTGA | 1 cut(s) | 118 |
| AvaI | CYCGRG | 1 cut(s) | 50 |
| AvaII | GGWCC | 1 cut(s) | 647 |
| BalI | TGGCCA | 1 cut(s) | 2024 |
| Bbv12I | GWGCWC | 1 cut(s) | 1822 |
| BbvI | GCAGC | 3 cut(s) | 913, 1370, 1972 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1994, 2028 |
| BciVI | GTATCC | 2 cut(s) | 683, 1689 |
| BclI | TGATCA | 2 cut(s) | 360, 681 |
| BcoDI | GTCTC | 5 cut(s) | 378, 523, 657, 2000, 2000 |
| BfaI | CTAG | 5 cut(s) | 761, 1340, 1547, 1551, 1874 |
| BfmI | CTRYAG | 3 cut(s) | 1591, 1825, 1990 |
| BfrI | CTTAAG | 1 cut(s) | 1361 |
| BfuI | GTATCC | 2 cut(s) | 683, 1689 |
| BisI | GCNGC | 3 cut(s) | 927, 1384, 1961 |
| BlsI | GCNGC | 3 cut(s) | 928, 1385, 1962 |
| BmcAI | AGTACT | 1 cut(s) | 1129 |
| Bme18I | GGWCC | 1 cut(s) | 647 |
| BmeT110I | CYCGRG | 1 cut(s) | 50 |
| BmgT120I | GGNCC | 2 cut(s) | 647, 1465 |
| BmiI | GGNNCC | 4 cut(s) | 438, 648, 1284, 1498 |
| BmrI | ACTGGG | 1 cut(s) | 1677 |
| BmsI | GCATC | 3 cut(s) | 890, 913, 1231 |
| BmuI | ACTGGG | 1 cut(s) | 1677 |
| BoxI | GACNNNNGTC | 1 cut(s) | 501 |
| BpmI | CTGGAG | 1 cut(s) | 954 |
| BpuEI | CTTGAG | 1 cut(s) | 2022 |
| Bsa29I | ATCGAT | 1 cut(s) | 1920 |
| BsaAI | YACGTR | 1 cut(s) | 138 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 739, 769 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 871 |
| Bse1I | ACTGG | 4 cut(s) | 195, 1683, 1740, 1882 |
| Bse3DI | GCAATG | 1 cut(s) | 172 |
| BseCI | ATCGAT | 1 cut(s) | 1920 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 871 |
| BseMI | GCAATG | 1 cut(s) | 172 |
| BseMII | CTCAG | 3 cut(s) | 561, 713, 1236 |
| BseNI | ACTGG | 4 cut(s) | 195, 1683, 1740, 1882 |
| BseXI | GCAGC | 3 cut(s) | 913, 1370, 1972 |
| Bsh1236I | CGCG | 1 cut(s) | 1475 |
| BshFI | GGCC | 5 cut(s) | 1110, 1467, 1674, 1702, 2024 |
| BshVI | ATCGAT | 1 cut(s) | 1920 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1822 |
| BsiHKCI | CYCGRG | 1 cut(s) | 50 |
| BsiSI | CCGG | 1 cut(s) | 20 |
| BslFI | GGGAC | 2 cut(s) | 236, 660 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 871 |
| BsmAI | GTCTC | 5 cut(s) | 378, 523, 657, 2000, 2000 |
| BsmBI | CGTCTC | 1 cut(s) | 657 |
| BsmFI | GGGAC | 2 cut(s) | 236, 660 |
| BsmI | GAATGC | 2 cut(s) | 1883, 1894 |
| BsnI | GGCC | 5 cut(s) | 1110, 1467, 1674, 1702, 2024 |
| BsoBI | CYCGRG | 1 cut(s) | 50 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1822 |
| Bsp1407I | TGTACA | 1 cut(s) | 1188 |
| Bsp143I | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| BspACI | CCGC | 1 cut(s) | 113 |
| BspANI | GGCC | 5 cut(s) | 1110, 1467, 1674, 1702, 2024 |
| BspCNI | CTCAG | 3 cut(s) | 560, 714, 1237 |
| BspDI | ATCGAT | 1 cut(s) | 1920 |
| BspFNI | CGCG | 1 cut(s) | 1475 |
| BspLI | GGNNCC | 4 cut(s) | 438, 648, 1284, 1498 |
| BspMAI | CTGCAG | 2 cut(s) | 1829, 1994 |
| BspPI | GGATC | 2 cut(s) | 1068, 1943 |
| BspTI | CTTAAG | 1 cut(s) | 1361 |
| BsrDI | GCAATG | 1 cut(s) | 172 |
| BsrGI | TGTACA | 1 cut(s) | 1188 |
| BsrI | ACTGG | 4 cut(s) | 195, 1683, 1740, 1882 |
| BssMI | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| BssNAI | GTATAC | 1 cut(s) | 777 |
| Bst1107I | GTATAC | 1 cut(s) | 777 |
| Bst6I | CTCTTC | 3 cut(s) | 314, 948, 1683 |
| BstAFI | CTTAAG | 1 cut(s) | 1361 |
| BstAUI | TGTACA | 1 cut(s) | 1188 |
| BstBAI | YACGTR | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 2 cut(s) | 1178, 1958 |
| BstDEI | CTNAG | 3 cut(s) | 547, 722, 1245 |
| BstEII | GGTNACC | 1 cut(s) | 448 |
| BstFNI | CGCG | 1 cut(s) | 1475 |
| BstHHI | GCGC | 2 cut(s) | 808, 1477 |
| BstKTI | GATC | 8 cut(s) | 100, 363, 684, 1063, 1345, 1624, 1645, 1951 |
| BstMAI | GTCTC | 5 cut(s) | 378, 523, 657, 2000, 2000 |
| BstMBI | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1241, 1336, 2021 |
| BstNSI | RCATGY | 1 cut(s) | 1960 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 501 |
| BstPI | GGTNACC | 1 cut(s) | 448 |
| BstSFI | CTRYAG | 3 cut(s) | 1591, 1825, 1990 |
| BstSNI | TACGTA | 1 cut(s) | 138 |
| BstUI | CGCG | 1 cut(s) | 1475 |
| BstV1I | GCAGC | 3 cut(s) | 913, 1370, 1972 |
| BstX2I | RGATCY | 1 cut(s) | 1948 |
| BstYI | RGATCY | 1 cut(s) | 1948 |
| BstZ17I | GTATAC | 1 cut(s) | 777 |
| Bsu15I | ATCGAT | 1 cut(s) | 1920 |
| BsuI | GTATCC | 2 cut(s) | 683, 1689 |
| BsuRI | GGCC | 5 cut(s) | 1110, 1467, 1674, 1702, 2024 |
| BsuTUI | ATCGAT | 1 cut(s) | 1920 |
| BtgZI | GCGATG | 1 cut(s) | 629 |
| BtsIMutI | CAGTG | 6 cut(s) | 188, 246, 370, 1489, 1690, 1889 |
| Cac8I | GCNNGC | 2 cut(s) | 1178, 1958 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1998 |
| CfoI | GCGC | 2 cut(s) | 808, 1477 |
| Cfr13I | GGNCC | 2 cut(s) | 647, 1465 |
| ClaI | ATCGAT | 1 cut(s) | 1920 |
| Csp6I | GTAC | 4 cut(s) | 139, 1128, 1189, 2096 |
| CviAII | CATG | 9 cut(s) | 445, 499, 533, 839, 1346, 1481, 1953, 1957, 1970 |
| CviQI | GTAC | 4 cut(s) | 139, 1128, 1189, 2096 |
| DdeI | CTNAG | 3 cut(s) | 547, 722, 1245 |
| DpnI | GATC | 8 cut(s) | 99, 362, 683, 1062, 1344, 1623, 1644, 1950 |
| DpnII | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| DraIII | CACNNNGTG | 2 cut(s) | 269, 1493 |
| EaeI | YGGCCR | 1 cut(s) | 2022 |
| Eam1104I | CTCTTC | 3 cut(s) | 314, 948, 1683 |
| EarI | CTCTTC | 3 cut(s) | 314, 948, 1683 |
| Eco105I | TACGTA | 1 cut(s) | 138 |
| Eco147I | AGGCCT | 2 cut(s) | 1674, 1702 |
| Eco47I | GGWCC | 1 cut(s) | 647 |
| Eco57I | CTGAAG | 1 cut(s) | 527 |
| Eco88I | CYCGRG | 1 cut(s) | 50 |
| Eco91I | GGTNACC | 1 cut(s) | 448 |
| EcoO65I | GGTNACC | 1 cut(s) | 448 |
| EcoRI | GAATTC | 1 cut(s) | 127 |
| EcoT22I | ATGCAT | 1 cut(s) | 1958 |
| Esp3I | CGTCTC | 1 cut(s) | 657 |
| FaeI | CATG | 9 cut(s) | 448, 502, 536, 842, 1349, 1484, 1956, 1960, 1973 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1056, 1088, 1775, 1807 |
| FaqI | GGGAC | 2 cut(s) | 236, 660 |
| FatI | CATG | 9 cut(s) | 444, 498, 532, 838, 1345, 1480, 1952, 1956, 1969 |
| FauI | CCCGC | 1 cut(s) | 106 |
| FauNDI | CATATG | 2 cut(s) | 1659, 2011 |
| FbaI | TGATCA | 2 cut(s) | 360, 681 |
| FblI | GTMKAC | 1 cut(s) | 776 |
| Fnu4HI | GCNGC | 3 cut(s) | 927, 1384, 1961 |
| Fsp4HI | GCNGC | 3 cut(s) | 927, 1384, 1961 |
| FspBI | CTAG | 5 cut(s) | 761, 1340, 1547, 1551, 1874 |
| GlaI | GCGC | 2 cut(s) | 807, 1476 |
| GluI | GCNGC | 3 cut(s) | 927, 1384, 1961 |
| GsuI | CTGGAG | 1 cut(s) | 954 |
| HaeIII | GGCC | 5 cut(s) | 1110, 1467, 1674, 1702, 2024 |
| HapII | CCGG | 1 cut(s) | 20 |
| HhaI | GCGC | 2 cut(s) | 808, 1477 |
| Hin1II | CATG | 9 cut(s) | 448, 502, 536, 842, 1349, 1484, 1956, 1960, 1973 |
| Hin6I | GCGC | 2 cut(s) | 806, 1475 |
| HinP1I | GCGC | 2 cut(s) | 806, 1475 |
| HincII | GTYRAC | 1 cut(s) | 1789 |
| HindII | GTYRAC | 1 cut(s) | 1789 |
| HinfI | GANTC | 5 cut(s) | 405, 604, 1515, 1739, 1979 |
| HpaI | GTTAAC | 1 cut(s) | 1789 |
| HpaII | CCGG | 1 cut(s) | 20 |
| HphI | GGTGA | 1 cut(s) | 118 |
| Hpy166II | GTNNAC | 8 cut(s) | 758, 771, 777, 1191, 1202, 1574, 1789, 2044 |
| Hpy188III | TCNNGA | 6 cut(s) | 971, 1144, 1223, 1286, 1748, 2005 |
| Hpy8I | GTNNAC | 8 cut(s) | 758, 771, 777, 1191, 1202, 1574, 1789, 2044 |
| HpyAV | CCTTC | 7 cut(s) | 103, 211, 418, 463, 910, 1220, 1268 |
| HpyCH4IV | ACGT | 4 cut(s) | 137, 773, 885, 1856 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1241, 1336, 2021 |
| HpyF3I | CTNAG | 3 cut(s) | 547, 722, 1245 |
| HpySE526I | ACGT | 4 cut(s) | 137, 773, 885, 1856 |
| Hsp92II | CATG | 9 cut(s) | 448, 502, 536, 842, 1349, 1484, 1956, 1960, 1973 |
| HspAI | GCGC | 2 cut(s) | 806, 1475 |
| Ksp22I | TGATCA | 2 cut(s) | 360, 681 |
| KspAI | GTTAAC | 1 cut(s) | 1789 |
| Kzo9I | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| LmnI | GCTCC | 1 cut(s) | 1654 |
| Lsp1109I | GCAGC | 3 cut(s) | 913, 1370, 1972 |
| LweI | GCATC | 3 cut(s) | 890, 913, 1231 |
| MaeI | CTAG | 5 cut(s) | 761, 1340, 1547, 1551, 1874 |
| MaeII | ACGT | 4 cut(s) | 137, 773, 885, 1856 |
| MaeIII | GTNAC | 9 cut(s) | 68, 119, 133, 448, 874, 1251, 1294, 1443, 1926 |
| MalI | GATC | 8 cut(s) | 99, 362, 683, 1062, 1344, 1623, 1644, 1950 |
| MboI | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| MboII | GAAGA | 9 cut(s) | 331, 501, 520, 965, 1271, 1631, 1700, 1856, 1958 |
| MfeI | CAATTG | 1 cut(s) | 477 |
| MflI | RGATCY | 1 cut(s) | 1948 |
| MhlI | GDGCHC | 1 cut(s) | 1822 |
| MlsI | TGGCCA | 1 cut(s) | 2024 |
| MluCI | AATT | 9 cut(s) | 76, 127, 255, 294, 462, 477, 818, 1101, 2067 |
| MluNI | TGGCCA | 1 cut(s) | 2024 |
| MlyI | GAGTC | 2 cut(s) | 399, 1733 |
| MmeI | TCCRAC | 1 cut(s) | 877 |
| Mox20I | TGGCCA | 1 cut(s) | 2024 |
| Mph1103I | ATGCAT | 1 cut(s) | 1958 |
| MscI | TGGCCA | 1 cut(s) | 2024 |
| MslI | CAYNNNNRTG | 2 cut(s) | 464, 537 |
| Msp20I | TGGCCA | 1 cut(s) | 2024 |
| MspCI | CTTAAG | 1 cut(s) | 1361 |
| MspI | CCGG | 1 cut(s) | 20 |
| MunI | CAATTG | 1 cut(s) | 477 |
| Mva1269I | GAATGC | 2 cut(s) | 1883, 1894 |
| MvnI | CGCG | 1 cut(s) | 1475 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1241, 1336, 2021 |
| NdeI | CATATG | 2 cut(s) | 1659, 2011 |
| NdeII | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| NlaIII | CATG | 9 cut(s) | 448, 502, 536, 842, 1349, 1484, 1956, 1960, 1973 |
| NlaIV | GGNNCC | 4 cut(s) | 438, 648, 1284, 1498 |
| NmuCI | GTSAC | 2 cut(s) | 119, 874 |
| NsiI | ATGCAT | 1 cut(s) | 1958 |
| NspI | RCATGY | 1 cut(s) | 1960 |
| PaeI | GCATGC | 1 cut(s) | 1960 |
| PceI | AGGCCT | 2 cut(s) | 1674, 1702 |
| PctI | GAATGC | 2 cut(s) | 1883, 1894 |
| PfeI | GAWTC | 3 cut(s) | 604, 1515, 1979 |
| PkrI | GCNGC | 3 cut(s) | 928, 1385, 1962 |
| PleI | GAGTC | 2 cut(s) | 399, 1733 |
| PpsI | GAGTC | 2 cut(s) | 399, 1733 |
| Ppu21I | YACGTR | 1 cut(s) | 138 |
| PshAI | GACNNNNGTC | 1 cut(s) | 501 |
| PshBI | ATTAAT | 3 cut(s) | 153, 1314, 1916 |
| Psp1406I | AACGTT | 2 cut(s) | 885, 1856 |
| PspEI | GGTNACC | 1 cut(s) | 448 |
| PspN4I | GGNNCC | 4 cut(s) | 438, 648, 1284, 1498 |
| PspPI | GGNCC | 2 cut(s) | 647, 1465 |
| PstI | CTGCAG | 2 cut(s) | 1829, 1994 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1998 |
| PsuI | RGATCY | 1 cut(s) | 1948 |
| RsaI | GTAC | 4 cut(s) | 140, 1129, 1190, 2097 |
| RsaNI | GTAC | 4 cut(s) | 139, 1128, 1189, 2096 |
| RseI | CAYNNNNRTG | 2 cut(s) | 464, 537 |
| SatI | GCNGC | 3 cut(s) | 927, 1384, 1961 |
| Sau3AI | GATC | 8 cut(s) | 97, 360, 681, 1060, 1342, 1621, 1642, 1948 |
| Sau96I | GGNCC | 2 cut(s) | 647, 1465 |
| ScaI | AGTACT | 1 cut(s) | 1129 |
| SchI | GAGTC | 2 cut(s) | 399, 1733 |
| SduI | GDGCHC | 1 cut(s) | 1822 |
| SfaNI | GCATC | 3 cut(s) | 890, 913, 1231 |
| SfcI | CTRYAG | 3 cut(s) | 1591, 1825, 1990 |
| SinI | GGWCC | 1 cut(s) | 647 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 464, 537 |
| SmlI | CTYRAG | 2 cut(s) | 1361, 2037 |
| SmoI | CTYRAG | 2 cut(s) | 1361, 2037 |
| SnaBI | TACGTA | 1 cut(s) | 138 |
| SphI | GCATGC | 1 cut(s) | 1960 |
| Sse9I | AATT | 9 cut(s) | 76, 127, 255, 294, 462, 477, 818, 1101, 2067 |
| SseBI | AGGCCT | 2 cut(s) | 1674, 1702 |
| SsiI | CCGC | 1 cut(s) | 113 |
| SspI | AATATT | 1 cut(s) | 340 |
| SspMI | CTAG | 5 cut(s) | 761, 1340, 1547, 1551, 1874 |
| StuI | AGGCCT | 2 cut(s) | 1674, 1702 |
| TaiI | ACGT | 4 cut(s) | 140, 776, 888, 1859 |
| TaqI | TCGA | 4 cut(s) | 280, 390, 1920, 2004 |
| TasI | AATT | 9 cut(s) | 76, 127, 255, 294, 462, 477, 818, 1101, 2067 |
| TatI | WGTACW | 3 cut(s) | 1127, 1188, 2095 |
| TfiI | GAWTC | 3 cut(s) | 604, 1515, 1979 |
| TscAI | CASTG | 6 cut(s) | 195, 253, 370, 1496, 1690, 1889 |
| TseFI | GTSAC | 2 cut(s) | 119, 874 |
| TseI | GCWGC | 3 cut(s) | 926, 1383, 1960 |
| Tsp45I | GTSAC | 2 cut(s) | 119, 874 |
| TspRI | CASTG | 6 cut(s) | 195, 253, 370, 1496, 1690, 1889 |
| Vha464I | CTTAAG | 1 cut(s) | 1361 |
| VpaK11BI | GGWCC | 1 cut(s) | 647 |
| VspI | ATTAAT | 3 cut(s) | 153, 1314, 1916 |
| XapI | RAATTY | 3 cut(s) | 76, 127, 818 |
| XceI | RCATGY | 1 cut(s) | 1960 |
| XmiI | GTMKAC | 1 cut(s) | 776 |
| XspI | CTAG | 5 cut(s) | 761, 1340, 1547, 1551, 1874 |
| ZrmI | AGTACT | 1 cut(s) | 1129 |
| Zsp2I | ATGCAT | 1 cut(s) | 1958 |