COBRA-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1215000.v1.1 |
| pyrus_communis | pycom12433g00020 |
| rosa_chinensis | RchiOBHm_Chr5g0059981 RchiOBHm_Chr7g0183441 |
| rosa_multiflora | Rmu_sc0000814.1_g000035 Rmu_sc0022860.1_g000001 |
| rosa_samantha | Rh5BG403600 Rh5CG427600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 139 |
| AclI | AACGTT | 1 cut(s) | 162 |
| AcsI | RAATTY | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 139 |
| AflII | CTTAAG | 1 cut(s) | 182 |
| AgsI | TTSAA | 4 cut(s) | 118, 127, 211, 247 |
| AluBI | AGCT | 3 cut(s) | 54, 316, 365 |
| AluI | AGCT | 3 cut(s) | 54, 316, 365 |
| AoxI | GGCC | 1 cut(s) | 149 |
| ApoI | RAATTY | 1 cut(s) | 174 |
| AseI | ATTAAT | 2 cut(s) | 137, 347 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 122, 177 |
| AspS9I | GGNCC | 1 cut(s) | 149 |
| AsuC2I | CCSGG | 1 cut(s) | 148 |
| AsuHPI | GGTGA | 1 cut(s) | 263 |
| BccI | CCATC | 1 cut(s) | 315 |
| BcnI | CCSGG | 1 cut(s) | 148 |
| BfrI | CTTAAG | 1 cut(s) | 182 |
| Bme1390I | CCNGG | 1 cut(s) | 148 |
| BmgT120I | GGNCC | 1 cut(s) | 149 |
| BmrFI | CCNGG | 1 cut(s) | 148 |
| BmsI | GCATC | 1 cut(s) | 255 |
| BoxI | GACNNNNGTC | 1 cut(s) | 8 |
| BpuMI | CCSGG | 1 cut(s) | 148 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 139 |
| Bse1I | ACTGG | 1 cut(s) | 103 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BseMII | CTCAG | 1 cut(s) | 342 |
| BseNI | ACTGG | 1 cut(s) | 103 |
| BshFI | GGCC | 1 cut(s) | 151 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BsnI | GGCC | 1 cut(s) | 151 |
| BspANI | GGCC | 1 cut(s) | 151 |
| BspCNI | CTCAG | 1 cut(s) | 341 |
| BspTI | CTTAAG | 1 cut(s) | 182 |
| BsrI | ACTGG | 1 cut(s) | 103 |
| BstAFI | CTTAAG | 1 cut(s) | 182 |
| BstDEI | CTNAG | 1 cut(s) | 328 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 8 |
| BstSCI | CCNGG | 1 cut(s) | 146 |
| BsuRI | GGCC | 1 cut(s) | 151 |
| BtsIMutI | CAGTG | 1 cut(s) | 96 |
| Cfr13I | GGNCC | 1 cut(s) | 149 |
| CviJI | RGCY | 6 cut(s) | 54, 67, 146, 151, 316, 365 |
| CviKI_1 | RGCY | 6 cut(s) | 54, 67, 146, 151, 316, 365 |
| DdeI | CTNAG | 1 cut(s) | 328 |
| FaiI | YATR | 6 cut(s) | 81, 89, 104, 111, 194, 283 |
| HaeIII | GGCC | 1 cut(s) | 151 |
| HapII | CCGG | 1 cut(s) | 147 |
| HinfI | GANTC | 2 cut(s) | 4, 83 |
| HpaII | CCGG | 1 cut(s) | 147 |
| HphI | GGTGA | 1 cut(s) | 263 |
| Hpy166II | GTNNAC | 1 cut(s) | 241 |
| Hpy188I | TCNGA | 1 cut(s) | 172 |
| Hpy8I | GTNNAC | 1 cut(s) | 241 |
| HpyAV | CCTTC | 1 cut(s) | 181 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyF3I | CTNAG | 1 cut(s) | 328 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| LpnPI | CCDG | 4 cut(s) | 84, 160, 275, 288 |
| LweI | GCATC | 1 cut(s) | 255 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MaeIII | GTNAC | 1 cut(s) | 37 |
| MboII | GAAGA | 1 cut(s) | 170 |
| MluCI | AATT | 4 cut(s) | 134, 174, 298, 348 |
| MlyI | GAGTC | 1 cut(s) | 92 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 3 cut(s) | 78, 208, 240 |
| MroXI | GAANNNNTTC | 2 cut(s) | 122, 177 |
| MseI | TTAA | 3 cut(s) | 137, 183, 347 |
| MslI | CAYNNNNRTG | 1 cut(s) | 101 |
| MspCI | CTTAAG | 1 cut(s) | 182 |
| MspI | CCGG | 1 cut(s) | 147 |
| MspR9I | CCNGG | 1 cut(s) | 148 |
| NciI | CCSGG | 1 cut(s) | 148 |
| NmuCI | GTSAC | 1 cut(s) | 37 |
| PdmI | GAANNNNTTC | 2 cut(s) | 122, 177 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 139 |
| PleI | GAGTC | 1 cut(s) | 91 |
| PpsI | GAGTC | 1 cut(s) | 91 |
| PshAI | GACNNNNGTC | 1 cut(s) | 8 |
| PshBI | ATTAAT | 2 cut(s) | 137, 347 |
| Psp1406I | AACGTT | 1 cut(s) | 162 |
| PspPI | GGNCC | 1 cut(s) | 149 |
| RseI | CAYNNNNRTG | 1 cut(s) | 101 |
| SaqAI | TTAA | 3 cut(s) | 137, 183, 347 |
| Sau96I | GGNCC | 1 cut(s) | 149 |
| SchI | GAGTC | 1 cut(s) | 92 |
| ScrFI | CCNGG | 1 cut(s) | 148 |
| SetI | ASST | 5 cut(s) | 56, 165, 277, 318, 367 |
| SfaNI | GCATC | 1 cut(s) | 255 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 101 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| Sse9I | AATT | 4 cut(s) | 134, 174, 298, 348 |
| StyD4I | CCNGG | 1 cut(s) | 146 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TaqI | TCGA | 1 cut(s) | 232 |
| TasI | AATT | 4 cut(s) | 134, 174, 298, 348 |
| Tru1I | TTAA | 3 cut(s) | 137, 183, 347 |
| Tru9I | TTAA | 3 cut(s) | 137, 183, 347 |
| TscAI | CASTG | 1 cut(s) | 103 |
| TseFI | GTSAC | 1 cut(s) | 37 |
| Tsp45I | GTSAC | 1 cut(s) | 37 |
| TspDTI | ATGAA | 1 cut(s) | 312 |
| TspRI | CASTG | 1 cut(s) | 103 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 139 |
| Vha464I | CTTAAG | 1 cut(s) | 182 |
| VspI | ATTAAT | 2 cut(s) | 137, 347 |
| XapI | RAATTY | 1 cut(s) | 174 |
| XmnI | GAANNNNTTC | 2 cut(s) | 122, 177 |