Rmu_sc0024225.1_g000002

UDP-glucose glycoprotein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024225.1
Physical Location & Seq
Reverse (-)
3060 .. 3594
535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024225.1_g000002.1.cds

Sequence Viewer

Length: 237 bp
atgctcaacatacagtgcccatattttcattgccacaagaatggctttggtgtgagtcatggtgtgggtgccagaagaatagtttctgagtggccagatcttgatttggaggctaggcagttcactgcgaaaatcttaggtgatgaagtcgcaatccaagaacctccaccagatcctaatcaatcaggatcagtgatggatagcccaccagacctggaatctaaggcagagttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003980 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006011 GO:0006139 GO:0006457 GO:0006458 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006515 GO:0006725 GO:0006793 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008219 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009225 GO:0009626 GO:0009719 GO:0009725 GO:0009751 GO:0009812 GO:0009987 GO:0010033 GO:0010204 GO:0010243 GO:0010498 GO:0012501 GO:0012505 GO:0014070 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0023052 GO:0030163 GO:0030968 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0034620 GO:0034641 GO:0034645 GO:0034976 GO:0035251 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0042221 GO:0042440 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046527 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051084 GO:0051603 GO:0051716 GO:0051788 GO:0055086 GO:0065007 GO:0070085 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0080134 GO:0097359 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1901700
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

78

Amino Acids

8.59

Weight (kDa)

4.73

Isoelectric Point (pI)

53.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 68
AclWI GGATC 2 cut(s) 167, 196
AcoI YGGCCR 1 cut(s) 92
AjnI CCWGG 1 cut(s) 213
AlwI GGATC 2 cut(s) 167, 196
AoxI GGCC 1 cut(s) 92
Asp700I GAANNNNTTC 1 cut(s) 82
AsuHPI GGTGA 1 cut(s) 152
BaeGI GKGCMC 1 cut(s) 20
BalI TGGCCA 1 cut(s) 94
BanI GGYRCC 1 cut(s) 68
BccI CCATC 1 cut(s) 190
BciT130I CCWGG 1 cut(s) 215
BfaI CTAG 1 cut(s) 114
BglII AGATCT 1 cut(s) 97
Bme1390I CCNGG 1 cut(s) 215
BmiI GGNNCC 1 cut(s) 70
BmrFI CCNGG 1 cut(s) 215
BsaBI GATNNNNATC 1 cut(s) 177
Bse3DI GCAATG 1 cut(s) 28
Bse8I GATNNNNATC 1 cut(s) 177
BseBI CCWGG 1 cut(s) 215
BseJI GATNNNNATC 1 cut(s) 177
BseMI GCAATG 1 cut(s) 28
BseMII CTCAG 1 cut(s) 78
BseSI GKGCMC 1 cut(s) 20
BshFI GGCC 1 cut(s) 94
BshNI GGYRCC 1 cut(s) 68
BsnI GGCC 1 cut(s) 94
Bsp1286I GDGCHC 1 cut(s) 20
Bsp143I GATC 3 cut(s) 97, 172, 188
BspANI GGCC 1 cut(s) 94
BspCNI CTCAG 1 cut(s) 79
BspLI GGNNCC 1 cut(s) 70
BspPI GGATC 2 cut(s) 167, 196
BspT107I GGYRCC 1 cut(s) 68
BsrDI GCAATG 1 cut(s) 28
BssMI GATC 3 cut(s) 97, 172, 188
Bst2UI CCWGG 1 cut(s) 215
Bst4CI ACNGT 1 cut(s) 15
BstDEI CTNAG 3 cut(s) 87, 136, 222
BstKTI GATC 3 cut(s) 100, 175, 191
BstMBI GATC 3 cut(s) 97, 172, 188
BstNI CCWGG 1 cut(s) 215
BstSCI CCNGG 1 cut(s) 213
BstSLI GKGCMC 1 cut(s) 20
BstX2I RGATCY 2 cut(s) 97, 172
BstXI CCANNNNNNTGG 1 cut(s) 41
BstYI RGATCY 2 cut(s) 97, 172
BsuRI GGCC 1 cut(s) 94
BtsI GCAGTG 1 cut(s) 123
BtsIMutI CAGTG 3 cut(s) 20, 123, 198
CviAII CATG 1 cut(s) 59
CviJI RGCY 4 cut(s) 45, 94, 113, 204
CviKI_1 RGCY 4 cut(s) 45, 94, 113, 204
DdeI CTNAG 3 cut(s) 87, 136, 222
DpnI GATC 3 cut(s) 99, 174, 190
DpnII GATC 3 cut(s) 97, 172, 188
EaeI YGGCCR 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 213
FaeI CATG 1 cut(s) 62
FaiI YATR 3 cut(s) 11, 22, 60
FalI AAGNNNNNCTT 2 cut(s) 29, 61
FatI CATG 1 cut(s) 58
FspBI CTAG 1 cut(s) 114
HaeIII GGCC 1 cut(s) 94
Hin1II CATG 1 cut(s) 62
HinfI GANTC 2 cut(s) 55, 218
HphI GGTGA 1 cut(s) 152
Hpy166II GTNNAC 1 cut(s) 123
Hpy188I TCNGA 1 cut(s) 88
Hpy188III TCNNGA 2 cut(s) 101, 186
Hpy8I GTNNAC 1 cut(s) 123
HpyCH4III ACNGT 1 cut(s) 15
HpyF3I CTNAG 3 cut(s) 87, 136, 222
Hsp92II CATG 1 cut(s) 62
Kzo9I GATC 3 cut(s) 97, 172, 188
LpnPI CCDG 7 cut(s) 85, 108, 171, 183, 200, 222, 227
MaeI CTAG 1 cut(s) 114
MalI GATC 3 cut(s) 99, 174, 190
MboI GATC 3 cut(s) 97, 172, 188
MboII GAAGA 1 cut(s) 87
MflI RGATCY 2 cut(s) 97, 172
MhlI GDGCHC 1 cut(s) 20
MlsI TGGCCA 1 cut(s) 94
MluNI TGGCCA 1 cut(s) 94
MlyI GAGTC 1 cut(s) 64
MnlI CCTC 2 cut(s) 103, 174
Mox20I TGGCCA 1 cut(s) 94
MroXI GAANNNNTTC 1 cut(s) 82
MscI TGGCCA 1 cut(s) 94
MslI CAYNNNNRTG 1 cut(s) 39
Msp20I TGGCCA 1 cut(s) 94
MspR9I CCNGG 1 cut(s) 215
MvaI CCWGG 1 cut(s) 215
NdeII GATC 3 cut(s) 97, 172, 188
NlaIII CATG 1 cut(s) 62
NlaIV GGNNCC 1 cut(s) 70
PdmI GAANNNNTTC 1 cut(s) 82
PfeI GAWTC 1 cut(s) 218
PleI GAGTC 1 cut(s) 63
PpsI GAGTC 1 cut(s) 63
Psp6I CCWGG 1 cut(s) 213
PspGI CCWGG 1 cut(s) 213
PspN4I GGNNCC 1 cut(s) 70
PsuI RGATCY 2 cut(s) 97, 172
RseI CAYNNNNRTG 1 cut(s) 39
Sau3AI GATC 3 cut(s) 97, 172, 188
SchI GAGTC 1 cut(s) 64
ScrFI CCNGG 1 cut(s) 215
SduI GDGCHC 1 cut(s) 20
SetI ASST 3 cut(s) 142, 166, 216
SmiMI CAYNNNNRTG 1 cut(s) 39
SspMI CTAG 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 213
TaaI ACNGT 1 cut(s) 15
TfiI GAWTC 1 cut(s) 218
TscAI CASTG 3 cut(s) 20, 130, 198
TspDTI ATGAA 2 cut(s) 17, 159
TspRI CASTG 3 cut(s) 20, 130, 198
XmnI GAANNNNTTC 1 cut(s) 82
XspI CTAG 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.