Rw7G029080

UDP-glucose glycoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0006844
Physical Location & Seq
Reverse (-)
40120880 .. 40145922
25043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G029080.1

Sequence Viewer

Length: 4809 bp
ATGGGGAGCCGTGCGTTTTGTGGTATTATCATCTTGATTTGTTTGGTTGGCTCGGTTTCGGTTTCGGTTTCAGCTCTGAATCGGAGGCCCAAGAATGTGCAGGTCGCCGTTCGGGCCAAGTGGTCCCCTACTCCATTGCTCCTAGAAGCTGGTGAATTGCTATCTAGAGAACAGAAAGATCATTTTTGGGAATTCATTGACATCTGGCATCATACTGATAAGGATGATCTTGATTCTTATAATGCTAAGGGTTGCCTAAAAAAAATTTTGAAACATGGGATCTCTATTTTGAGTGAACCATTGGCTTCTTTATTTGAATTCTCTCTTACATTGAGATCTGCATCCCCAAGATTGGTGCTTTACCGGCAATTAGCTGAAGAGTCTCTTTCATCTTTCCCACCATCAGATCCTTTGAATGTTGGTCTAAACCCAAGAAGTCCAAATGGAAAATGTTGTTGGGTGGATACTGGAGATGCTCTGTTCTTTGATGCTGGAGACTTAAAAAGTTGGCTTAACAGTCCTAGAGATTCTTCTAGGGATTCATTTCAGCAGCCTGAACTCTTCGAATTTGACCACATCCACTTTGATTCAATTGTTGGAAGTCCAGTTGCTGTTCTTTATGGAGCTCTTGGAACTGAGTGCTTTAGGGAGTTTCATGTCACCCTAGTTGAAGCTGCAAAAGAGGGTAATGTTAAGTATGTGGTTAGGCAAGTATTACCTTCTGGCTGCGAAGCAGAGATTGACCGTTGTGGTGCTGTTGGTACAAAAGATTCGTTAAACTTGGGTGGTTATGGAGTTGAACTTGCCTTGAAGAACATGGAATATAAGGCCATGGATGATAGTGCAATAAAGAAAGGTGTCACGTTAGAAGATCCTCGGACTGAAGATCTCAGCCAAGAAGTCAGAGGGTTTATATTCTCTAAAATTCTGGAGCGTAAACCTGAACTCACATCAGAGATAATGGCTTTTAGGGATTATCTTTTGTCATCAACAGTATCTGATACACTTGATGTTTGGGAACTAAAAGATTTAGGACATCAAACTGCACAGAGGATAGTGCATGCCACTGATCCTCTGCAGTCAATGCAAGAAATTAATCAAAACTTTCCCAGTGTTGTCTCTTCCTTATCTCGCATGAAGCTCAATGATTCAGTTAAAGATGAAATTACTGCAAACCAGAGAATGATTCCACCTGGAAAGTCCTTGATGGCTCTGAATGGTGCTTTAGTCAATATTGAAGATATTGACCTTTATCTGTTGGTTGACTTGGTCCATCAGGATTTATTATTGGCTGATCACTTTTCAAAGTTGAAGATACCTCATAGCACTGTACGGAAACTCCTGTCAACTCTGCCTCCTCCAGAATCTAATATGTTGCGTGTAGATTTTCGCTCAAATCATGTTCATTATTTAAATAACTTGGAAGAAGATGCTATGTATAAGCGTTGGAGGAGCAATCTTAATGAGATTTTGATGCCAGTGTTCCCTGGACAGCTACGTTATATACGCAAAAACCTTTTCCATGCTGTTTCTGTTATTGATCCATCAACTGTTTGTGGTCTTGAGTCTATTGATATGCTTATTTCTTTGTATGAGAATAACTTTCCCATGAGATTTGGGGTTGTACTGTATTCTTCGAAGTTGATCAAGCAAATTGAAACTAGCAGTGATGATAGTAAAATTGAGGAGGATATATCCAACCTGATAATACGCCTCTTTATTTATATCAAGGAAAATCATGGAATTCAAACAGCTTTCCAATTTTTGAGCAATATAAATAAATTGCGGGTTGAGTCTGATGGTTCGGCTGATGATATTGAAATGCACTATGTAGAAGGAGCATTTGTAGAAACAGTATTACCAAAGGTAAAATCTCCTCCTCAAGGCATACTGCTGAAGCTGCAGAAGGAGCAAACTTACAAGGAACTTGCACATGAAAGCACCATGTTTGTCTTTAAGCTGGGCTTGGCTAAGCTTCAGTGCAGTTTGCTGATGAATGGACTCGTGTTGGATTCTAGTGAGGAGGCTCTTATAAATTCCATGAACGATGAGATGCCCAGAATACAGGAGCAAGTATACTATGGCCATATAAATTCTCAAACAAATGTTCTTGACAAGTTTTTGTCAGAAAGTGGTACCACTCGCTATAATCCACAGATTATTGCCGGTGGAAAACCAAGGTTCACATCTCTGTGCACATCTTTTCTTGGAGGGGAAGGTGTCTTCAATGATATTGGTTATTTGCATTCCCCCGAAACTGTGGATGATTTGAAGCCTGTGACTCATCTTCTAGTGGTTGATGTTGCATCAAAGAAAGGGATGAAGCTGCTTCATGAAGCCTTACACTATCTGATTGAAGGGTCTAATAGGGCTCGAGTAGGAGTGCTTTTCGGTGTCAATCAGGGTGCTGATCTTTCTAGTCTCCTTTTTGTTGAAGTATTTCAAATCACCGCATCATTGCACAGCCACAAGAAGGATGTGTTACTTTTCTTGGATCAGGTGTGCTCCTTGTTTGAACATAATCACATGCTTGCACCTTCTGAAGGTGCGGAGAGCACTCAAGCATTCATAGATAAAGTTTCTGAATTGGCTGAGACAAATGGGTTATCATCAAAGGCCTATAAATCAGCTCTTTCGGACTTTTCTGCTGACAAATTGAGAAAACAGTTGAATAAGGTGGCACAGTTTTTATATAGGCAACTTGGCCTTGATTCTGGTGTTAATGCAGTCATTACTAACGGACGGGTAACGGTTGTAAATGAGGAGAGCACATTGTTGAGCCATGATTTAAATCTTCTTGAGTCTCTGGAGTTTACACAGAGAATAAAGCATATTGTTGAAATAATAGAAGAAGTGAAGTGGCAGCATGTGGATCCAGACACACTGACAAGCAAATTCATTAGTGATACTATCATGTTTGTGTCTTCTTCAATGGCTATGCGGGATCGAAGTTCTGAAGGTGCACGCTTTGAGGTTTTGAATGCAGAATATAGTGCCATCGTTCTGAACAATGAAAATTCTAGTATCCATATAGATGCAGTTATTGATCCTTTAAGTCCATCTGGCCAGAAGCTATCATCAATTCTTCGGGTTCTATGGAAATATGTTCAGCCTAGCATGAGAATTGTATTAAATCCGTTGAGTTCTCTTGTTGATCTTCCTCTGAAGAATTACTACAGATATGTAGTACCGACAGTGGATGACTTCAGCAGCACTGACTACACAGTAAATGGGCCAAAAGCCTTTTTTGCAAACATGCCACTGTCCAAAACCCTCACTATGAATCTTGATGTTCCTGATCCATGGCTTGTTGAGCCTGTTATTGCAGTGCATGACTTGGATAATATTTTGCTTGAGAATCTTGGTGAGACAAGAACATTACAAGCTGTTTTTGAACTTGAAGCTCTTGTTGTGACGGGTCATTGTTCTGAGAAAGATCATGATCCGCCCAGAGGCCTTCAGTTAATTATTGGTACCAAGAGTGCACCCCATTTGGTTGATACTCTTGTGATGGCCAATCTGGGTTATTGGCAAATGAAAGTCTCTCCTGGTGTTTGGTACCTACAACTTGCTCCAGGAAGAAGTTCTGAGCTTTATGTTTTAAAAGAGGATGGTGATGGAAGTGAGAGCAAAACATTATCAAAACGCATCACCATTAATGATCTGCGGGGTAGAGTAGTTCACCTGGAAGTAGTAAAGAAAAAGGGAAAGGAGCATGAAAAATTGCTGCTTTCTGATGTTAATGACAAGACACAGGATGCTACCGAGGGAAGTAGCTGGAACTCCAACTTTATAAAATGGGCTTCTGGTTTAATTGGTGGCAGTGAGCACTCAAAACAGAGTGAAAGTACTTTATCGGAGAAAGGAAAAGGTGGGCGCCATGGAAAAACAATAAATATTTTTTCTATTGCTTCTGGACACCTATACGAACGGTTTTTGAAAATCATGATTTTAAGTGTCTTGAAGAACACCCGTCGTCCAGTAAAATTCTGGTTCATAAAGAACTATCTCTCTCCTCAGTTCAAGGATGTGATTCCACATATGGCTCATGAATATGGCTTTGAGTATCAGCTAATCACCTACAAGTGGCCTACATGGTTGCACAAGCAAAAAGAAAAGCAACGAATTATTTGGGCCTATAAAATTTTGTTCCTTGATGTTATATTCCCCCTTTCGTTAGAAAAGGTCATCTTTGTTGATGCAGATCAGATCGTCAGGGCAGACATGGGAGAACTCTATGACATGGATATAAAAGGAAGACCTCTGGCATATACTCCTTTCTGTGACAACAACAAGGATATGGATGGATATCGGTTTTGGAGACAAGGTTTCTGGAAAGAACATTTACGGGGGAGATCTTATCATATAAGTGCTTTGTATGTCGTTGATTTGAAGAAATTTCGAGAGACTGCAGCAGGAGATAATCTGAGAGTTTTCTATGAGACTCTTAGCAAGGACCCAAATAGTCTTTCAAATTTGGATCAGGATCTTCCAAACTATGCTCAACATACAGTGCCCATATTTTCATTACCACAAGAATGGCTATGGTGTGAGTCATGGTGTGGTAATGCCACAAAAGCCAAAGCAAAAACCATAGATCTTTGCAACAACCCAATGACAAAGGAACCCAAGCTCCAGGGTGCCAGAAGAATAGTTTCTGAGTGGCCAGATCTTGATTTGGAGGCTAGGCAGTTCACTGCAAAAATCTTAGGTGATGAAGTCGCAATCCAAGAACCTCCACCAGTTCCTAATCAATCAGGATCAGTGATGGACAGCCCACCAGACCTGGAATCTAAGGCAGAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003980 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006011 GO:0006139 GO:0006457 GO:0006458 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006515 GO:0006725 GO:0006793 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008219 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009225 GO:0009626 GO:0009719 GO:0009725 GO:0009751 GO:0009812 GO:0009987 GO:0010033 GO:0010204 GO:0010243 GO:0010498 GO:0012501 GO:0012505 GO:0014070 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0023052 GO:0030163 GO:0030968 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0034620 GO:0034641 GO:0034645 GO:0034976 GO:0035251 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0042221 GO:0042440 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046527 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051084 GO:0051603 GO:0051716 GO:0051788 GO:0055086 GO:0065007 GO:0070085 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0080134 GO:0097359 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Glyco_transf_8 UDP-g_GGTase

Protein Analysis

1602

Amino Acids

180.61

Weight (kDa)

5.75

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin_12 PF18400 44 - 245 1.1e-50 Thioredoxin-like domain
Thioredoxin_13 PF18401 334 - 449 3.5e-33 Thioredoxin-like domain
Thioredoxin_14 PF18402 462 - 720 1.6e-57 Thioredoxin-like domain
Thioredoxin_15 PF18403 740 - 979 6.4e-41 Thioredoxin-like domain
UDP-g_GGTase PF06427 1140 - 1243 5.1e-29 UDP-glucose:Glycoprotein Glucosyltransferase
Glyco_transf_24 PF18404 1298 - 1564 6.8e-144 Glucosyltransferase 24
Glyco_transf_8 PF01501 1309 - 1521 1.3e-07 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 240, 2033, 3794
Acc36I ACCTGC 1 cut(s) 91
Acc65I GGTACC 3 cut(s) 2135, 3473, 3558
AccB1I GGYRCC 5 cut(s) 2135, 3473, 3558, 3876, 4640
AccI GTMKAC 1 cut(s) 2076
AciI CCGC 6 cut(s) 1786, 2451, 2549, 2941, 3446, 3667
AcoI YGGCCR 4 cut(s) 2083, 3064, 3513, 4664
AcuI CTGAAG 9 cut(s) 396, 903, 1916, 1961, 2562, 2976, 3185, 3190, 3443
AcyI GRCGYC 1 cut(s) 3877
AfaI GTAC 8 cut(s) 763, 1332, 1626, 2137, 3189, 3475, 3560, 3850
AfiI CCNNNNNNNGG 6 cut(s) 352, 1883, 2473, 2543, 3452, 4086
AjnI CCWGG 7 cut(s) 1192, 1486, 3547, 3574, 3684, 4635, 4785
AjuI GAANNNNNNNTTGG 4 cut(s) 439, 471, 4453, 4485
AloI GAACNNNNNNTCC 2 cut(s) 4617, 4649
Alw21I GWGCWC 8 cut(s) 628, 2198, 2507, 2558, 2771, 2965, 3487, 3831
Alw44I GTGCAC 3 cut(s) 2194, 2961, 3483
AlwNI CAGNNNCTG 2 cut(s) 611, 998
Ama87I CYCGRG 1 cut(s) 2373
ApaLI GTGCAC 3 cut(s) 2194, 2961, 3483
ApeKI GCWGC 9 cut(s) 550, 674, 726, 1900, 2326, 2863, 3210, 3727, 4412
AseI ATTAAT 2 cut(s) 1095, 3657
Asp700I GAANNNNTTC 3 cut(s) 2439, 3583, 4654
Asp718I GGTACC 3 cut(s) 2135, 3473, 3558
AspLEI GCGC 1 cut(s) 3879
AspS9I GGNCC 7 cut(s) 87, 114, 123, 1270, 3233, 4134, 4456
AsuHPI GGTGA 9 cut(s) 164, 652, 2440, 3377, 3626, 3643, 3674, 4069, 4724
AsuII TTCGAA 2 cut(s) 564, 1637
AvaI CYCGRG 1 cut(s) 2373
AvaII GGWCC 3 cut(s) 123, 1270, 4456
BaeGI GKGCMC 4 cut(s) 2198, 2965, 3487, 4518
BaeI ACNNNNGTAYC 2 cut(s) 3492, 3525
BalI TGGCCA 4 cut(s) 2085, 3066, 3515, 4666
BamHI GGATCC 1 cut(s) 2872
BanI GGYRCC 5 cut(s) 2135, 3473, 3558, 3876, 4640
BanII GRGCYC 2 cut(s) 628, 2374
BarI GAAGNNNNNNTAC 2 cut(s) 3158, 3190
BauI CACGAG 1 cut(s) 2003
BbsI GAAGAC 3 cut(s) 2215, 2916, 4264
Bbv12I GWGCWC 8 cut(s) 628, 2198, 2507, 2558, 2771, 2965, 3487, 3831
BbvI GCAGC 9 cut(s) 562, 661, 713, 1887, 2313, 2875, 3222, 3714, 4424
BceAI ACGGC 1 cut(s) 92
BciT130I CCWGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
BciVI GTATCC 2 cut(s) 457, 3035
BclI TGATCA 2 cut(s) 1294, 1644
BfmI CTRYAG 4 cut(s) 1076, 1901, 3175, 4410
BfoI RGCGCY 1 cut(s) 3880
BfuAI ACCTGC 1 cut(s) 91
BfuI GTATCC 2 cut(s) 457, 3035
BglI GCCNNNNNGGC 1 cut(s) 113
BglII AGATCT 5 cut(s) 335, 886, 4355, 4597, 4669
BisI GCNGC 9 cut(s) 551, 675, 727, 1901, 2327, 2864, 3211, 3728, 4413
BlpI GCTNAGC 1 cut(s) 1971
BlsI GCNGC 9 cut(s) 552, 676, 728, 1902, 2328, 2865, 3212, 3729, 4414
BmcAI AGTACT 1 cut(s) 3850
Bme1390I CCNGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
Bme18I GGWCC 3 cut(s) 123, 1270, 4456
BmeT110I CYCGRG 1 cut(s) 2373
BmgT120I GGNCC 7 cut(s) 87, 114, 123, 1270, 3233, 4134, 4456
BmrFI CCNGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
BmrI ACTGGG 1 cut(s) 1104
BmuI ACTGGG 1 cut(s) 1104
BpiI GAAGAC 3 cut(s) 2215, 2916, 4264
BpmI CTGGAG 7 cut(s) 489, 513, 950, 1344, 2828, 3558, 4619
Bpu10I CCTNAGC 1 cut(s) 246
Bpu1102I GCTNAGC 1 cut(s) 1971
Bpu14I TTCGAA 2 cut(s) 564, 1637
BpuEI CTTGAG 5 cut(s) 1583, 1866, 2544, 2819, 3374
BsaBI GATNNNNATC 6 cut(s) 340, 2790, 3441, 4203, 4308, 4485
BsaHI GRCGYC 1 cut(s) 3877
BsaJI CCNNGG 8 cut(s) 831, 875, 1486, 2177, 3302, 3765, 3880, 4636
Bsc4I CCNNNNNNNGG 6 cut(s) 352, 1883, 2473, 2543, 3452, 4086
Bse118I RCCGGY 2 cut(s) 363, 2165
Bse1I ACTGG 6 cut(s) 472, 605, 1110, 1478, 3980, 4742
Bse3DI GCAATG 2 cut(s) 134, 2456
Bse8I GATNNNNATC 6 cut(s) 340, 2790, 3441, 4203, 4308, 4485
BseBI CCWGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
BseDI CCNNGG 8 cut(s) 831, 875, 1486, 2177, 3302, 3765, 3880, 4636
BseJI GATNNNNATC 6 cut(s) 340, 2790, 3441, 4203, 4308, 4485
BseLI CCNNNNNNNGG 6 cut(s) 352, 1883, 2473, 2543, 3452, 4086
BseMI GCAATG 2 cut(s) 134, 2456
BseMII CTCAG 8 cut(s) 627, 904, 2583, 3420, 3579, 4031, 4418, 4650
BseNI ACTGG 6 cut(s) 472, 605, 1110, 1478, 3980, 4742
BseRI GAGGAG 8 cut(s) 1347, 1465, 1700, 1866, 1869, 2036, 2777, 4005
BseSI GKGCMC 4 cut(s) 2198, 2965, 3487, 4518
BseXI GCAGC 9 cut(s) 562, 661, 713, 1887, 2313, 2875, 3222, 3714, 4424
BseYI CCCAGC 1 cut(s) 1960
BsgI GTGCAG 3 cut(s) 119, 1029, 2002
BshNI GGYRCC 5 cut(s) 2135, 3473, 3558, 3876, 4640
BsiHKAI GWGCWC 8 cut(s) 628, 2198, 2507, 2558, 2771, 2965, 3487, 3831
BsiHKCI CYCGRG 1 cut(s) 2373
BsiSI CCGG 2 cut(s) 364, 2166
BslFI GGGAC 1 cut(s) 109
BslI CCNNNNNNNGG 6 cut(s) 352, 1883, 2473, 2543, 3452, 4086
BsmFI GGGAC 1 cut(s) 109
BsmI GAATGC 3 cut(s) 2245, 2564, 2986
BsoBI CYCGRG 1 cut(s) 2373
Bsp119I TTCGAA 2 cut(s) 564, 1637
Bsp1720I GCTNAGC 1 cut(s) 1971
Bsp19I CCATGG 3 cut(s) 831, 3302, 3880
BspACI CCGC 6 cut(s) 1786, 2451, 2549, 2941, 3446, 3667
BspCNI CTCAG 8 cut(s) 628, 903, 2584, 3421, 3580, 4030, 4419, 4651
BspHI TCATGA 4 cut(s) 2332, 3439, 3945, 4048
BspMAI CTGCAG 3 cut(s) 1080, 1905, 4414
BspMI ACCTGC 1 cut(s) 91
BspT104I TTCGAA 2 cut(s) 564, 1637
BspT107I GGYRCC 5 cut(s) 2135, 3473, 3558, 3876, 4640
BsrDI GCAATG 2 cut(s) 134, 2456
BsrFI RCCGGY 2 cut(s) 363, 2165
BsrI ACTGG 6 cut(s) 472, 605, 1110, 1478, 3980, 4742
BssAI RCCGGY 2 cut(s) 363, 2165
BssECI CCNNGG 8 cut(s) 831, 875, 1486, 2177, 3302, 3765, 3880, 4636
BssNAI GTATAC 1 cut(s) 2077
BssNI GRCGYC 1 cut(s) 3877
BssSI CACGAG 1 cut(s) 2003
BssT1I CCWWGG 4 cut(s) 831, 2177, 3302, 3880
Bst1107I GTATAC 1 cut(s) 2077
Bst2BI CACGAG 1 cut(s) 2003
Bst2UI CCWGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
Bst6I CTCTTC 3 cut(s) 372, 566, 1126
BstACI GRCGYC 1 cut(s) 3877
BstAPI GCANNNNNTGC 1 cut(s) 1084
BstBI TTCGAA 2 cut(s) 564, 1637
BstC8I GCNNGC 3 cut(s) 1062, 2532, 2965
BstDSI CCRYGG 3 cut(s) 831, 3302, 3880
BstENI CCTNNNNNAGG 2 cut(s) 1881, 2541
BstH2I RGCGCY 1 cut(s) 3880
BstHHI GCGC 1 cut(s) 3879
BstMWI GCNNNNNNNGC 8 cut(s) 113, 364, 1084, 1900, 1909, 3248, 3313, 4577
BstNI CCWGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
BstNSI RCATGY 4 cut(s) 1064, 2530, 2870, 3259
BstSCI CCNGG 7 cut(s) 1192, 1486, 3547, 3574, 3684, 4635, 4785
BstSFI CTRYAG 4 cut(s) 1076, 1901, 3175, 4410
BstSLI GKGCMC 4 cut(s) 2198, 2965, 3487, 4518
BstV1I GCAGC 9 cut(s) 562, 661, 713, 1887, 2313, 2875, 3222, 3714, 4424
BstV2I GAAGAC 3 cut(s) 2215, 2916, 4264
BstXI CCANNNNNNTGG 1 cut(s) 4539
BstZ17I GTATAC 1 cut(s) 2077
BsuI GTATCC 2 cut(s) 457, 3035
BtgI CCRYGG 3 cut(s) 831, 3302, 3880
BtsI GCAGTG 4 cut(s) 1672, 3333, 3829, 4695
BveI ACCTGC 1 cut(s) 91
Cac8I GCNNGC 3 cut(s) 1062, 2532, 2965
CaiI CAGNNNCTG 2 cut(s) 611, 998
CciI TCATGA 4 cut(s) 2332, 3439, 3945, 4048
CfoI GCGC 1 cut(s) 3879
Cfr10I RCCGGY 2 cut(s) 363, 2165
Cfr13I GGNCC 7 cut(s) 87, 114, 123, 1270, 3233, 4134, 4456
Csp6I GTAC 8 cut(s) 762, 1331, 1625, 2136, 3188, 3474, 3559, 3849
CviQI GTAC 8 cut(s) 762, 1331, 1625, 2136, 3188, 3474, 3559, 3849
DinI GGCGCC 1 cut(s) 3878
DraI TTTAAA 3 cut(s) 1413, 2790, 3603
EaeI YGGCCR 4 cut(s) 2083, 3064, 3513, 4664
Eam1104I CTCTTC 3 cut(s) 372, 566, 1126
EarI CTCTTC 3 cut(s) 372, 566, 1126
EciI GGCGGA 1 cut(s) 3435
Ecl136II GAGCTC 1 cut(s) 626
Eco130I CCWWGG 4 cut(s) 831, 2177, 3302, 3880
Eco147I AGGCCT 2 cut(s) 2618, 3456
Eco24I GRGCYC 2 cut(s) 628, 2374
Eco32I GATATC 1 cut(s) 4310
Eco47I GGWCC 3 cut(s) 123, 1270, 4456
Eco53kI GAGCTC 1 cut(s) 626
Eco57I CTGAAG 9 cut(s) 396, 903, 1916, 1961, 2562, 2976, 3185, 3190, 3443
Eco88I CYCGRG 1 cut(s) 2373
EcoICRI GAGCTC 1 cut(s) 626
EcoNI CCTNNNNNAGG 2 cut(s) 1881, 2541
EcoO109I RGGNCCY 1 cut(s) 4456
EcoRI GAATTC 3 cut(s) 191, 317, 1743
EcoRII CCWGG 7 cut(s) 1192, 1486, 3547, 3574, 3684, 4635, 4785
EcoRV GATATC 1 cut(s) 4310
EcoT14I CCWWGG 4 cut(s) 831, 2177, 3302, 3880
EcoT38I GRGCYC 2 cut(s) 628, 2374
EgeI GGCGCC 1 cut(s) 3878
EheI GGCGCC 1 cut(s) 3878
ErhI CCWWGG 4 cut(s) 831, 2177, 3302, 3880
FalI AAGNNNNNCTT 6 cut(s) 369, 401, 1949, 1981, 4175, 4207
FaqI GGGAC 1 cut(s) 109
FauI CCCGC 3 cut(s) 1779, 2934, 3660
FauNDI CATATG 1 cut(s) 4041
FbaI TGATCA 2 cut(s) 1294, 1644
FblI GTMKAC 1 cut(s) 2076
Fnu4HI GCNGC 9 cut(s) 551, 675, 727, 1901, 2327, 2864, 3211, 3728, 4413
FriOI GRGCYC 2 cut(s) 628, 2374
Fsp4HI GCNGC 9 cut(s) 551, 675, 727, 1901, 2327, 2864, 3211, 3728, 4413
GlaI GCGC 1 cut(s) 3878
GluI GCNGC 9 cut(s) 551, 675, 727, 1901, 2327, 2864, 3211, 3728, 4413
GsaI CCCAGC 1 cut(s) 1964
GsuI CTGGAG 7 cut(s) 489, 513, 950, 1344, 2828, 3558, 4619
HaeII RGCGCY 1 cut(s) 3880
HapII CCGG 2 cut(s) 364, 2166
HhaI GCGC 1 cut(s) 3879
Hin1I GRCGYC 1 cut(s) 3877
Hin6I GCGC 1 cut(s) 3877
HinP1I GCGC 1 cut(s) 3877
HincII GTYRAC 2 cut(s) 1264, 1347
HindII GTYRAC 2 cut(s) 1264, 1347
HindIII AAGCTT 1 cut(s) 1973
HpaII CCGG 2 cut(s) 364, 2166
HphI GGTGA 9 cut(s) 164, 652, 2440, 3377, 3626, 3643, 3674, 4069, 4724
Hpy99I CGWCG 1 cut(s) 3978
HpyCH4IV ACGT 2 cut(s) 863, 1498
HpyF10VI GCNNNNNNNGC 8 cut(s) 113, 364, 1084, 1900, 1909, 3248, 3313, 4577
HpySE526I ACGT 2 cut(s) 863, 1498
Hsp92I GRCGYC 1 cut(s) 3877
HspAI GCGC 1 cut(s) 3877
KasI GGCGCC 1 cut(s) 3876
KpnI GGTACC 3 cut(s) 2139, 3477, 3562
Ksp22I TGATCA 2 cut(s) 1294, 1644
Lsp1109I GCAGC 9 cut(s) 562, 661, 713, 1887, 2313, 2875, 3222, 3714, 4424
MaeII ACGT 2 cut(s) 863, 1498
MaeIII GTNAC 7 cut(s) 658, 859, 2278, 2481, 2746, 3412, 4283
MfeI CAATTG 1 cut(s) 591
MlsI TGGCCA 4 cut(s) 2085, 3066, 3515, 4666
MluNI TGGCCA 4 cut(s) 2085, 3066, 3515, 4666
Mly113I GGCGCC 1 cut(s) 3877
MlyI GAGTC 8 cut(s) 389, 1574, 1802, 1995, 2275, 2810, 4438, 4562
MmeI TCCRAC 5 cut(s) 577, 1427, 1722, 1989, 3810
Mox20I TGGCCA 4 cut(s) 2085, 3066, 3515, 4666
MroXI GAANNNNTTC 3 cut(s) 2439, 3583, 4654
MscI TGGCCA 4 cut(s) 2085, 3066, 3515, 4666
MslI CAYNNNNRTG 6 cut(s) 2191, 2918, 3033, 4053, 4368, 4537
Msp20I TGGCCA 4 cut(s) 2085, 3066, 3515, 4666
MspI CCGG 2 cut(s) 364, 2166
MspR9I CCNGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
MunI CAATTG 1 cut(s) 591
Mva1269I GAATGC 3 cut(s) 2245, 2564, 2986
MvaI CCWGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
MwoI GCNNNNNNNGC 8 cut(s) 113, 364, 1084, 1900, 1909, 3248, 3313, 4577
NarI GGCGCC 1 cut(s) 3877
NcoI CCATGG 3 cut(s) 831, 3302, 3880
NdeI CATATG 1 cut(s) 4041
NmuCI GTSAC 5 cut(s) 658, 859, 2278, 3412, 4283
NspI RCATGY 4 cut(s) 1064, 2530, 2870, 3259
NspV TTCGAA 2 cut(s) 564, 1637
PaeI GCATGC 1 cut(s) 1064
PaeR7I CTCGAG 1 cut(s) 2373
PagI TCATGA 4 cut(s) 2332, 3439, 3945, 4048
PceI AGGCCT 2 cut(s) 2618, 3456
PctI GAATGC 3 cut(s) 2245, 2564, 2986
PdmI GAANNNNTTC 3 cut(s) 2439, 3583, 4654
PflFI GACNNNGTC 1 cut(s) 1268
PfoI TCCNGGA 1 cut(s) 3574
PkrI GCNGC 9 cut(s) 552, 676, 728, 1902, 2328, 2865, 3212, 3729, 4414
PleI GAGTC 8 cut(s) 388, 1573, 1801, 1995, 2275, 2809, 4438, 4561
PluTI GGCGCC 1 cut(s) 3880
PpsI GAGTC 8 cut(s) 388, 1573, 1801, 1995, 2275, 2809, 4438, 4561
PpuMI RGGWCCY 1 cut(s) 4456
PshBI ATTAAT 2 cut(s) 1095, 3657
PsiI TTATAA 3 cut(s) 240, 2033, 3794
Psp124BI GAGCTC 1 cut(s) 628
Psp5II RGGWCCY 1 cut(s) 4456
Psp6I CCWGG 7 cut(s) 1192, 1486, 3547, 3574, 3684, 4635, 4785
PspFI CCCAGC 1 cut(s) 1960
PspGI CCWGG 7 cut(s) 1192, 1486, 3547, 3574, 3684, 4635, 4785
PspPI GGNCC 7 cut(s) 87, 114, 123, 1270, 3233, 4134, 4456
PspPPI RGGWCCY 1 cut(s) 4456
PspXI VCTCGAGB 1 cut(s) 2373
PstI CTGCAG 3 cut(s) 1080, 1905, 4414
PstNI CAGNNNCTG 2 cut(s) 611, 998
PsyI GACNNNGTC 1 cut(s) 1268
RsaI GTAC 8 cut(s) 763, 1332, 1626, 2137, 3189, 3475, 3560, 3850
RsaNI GTAC 8 cut(s) 762, 1331, 1625, 2136, 3188, 3474, 3559, 3849
RseI CAYNNNNRTG 6 cut(s) 2191, 2918, 3033, 4053, 4368, 4537
SacI GAGCTC 1 cut(s) 628
SatI GCNGC 9 cut(s) 551, 675, 727, 1901, 2327, 2864, 3211, 3728, 4413
Sau96I GGNCC 7 cut(s) 87, 114, 123, 1270, 3233, 4134, 4456
ScaI AGTACT 1 cut(s) 3850
SchI GAGTC 8 cut(s) 389, 1574, 1802, 1995, 2275, 2810, 4438, 4562
ScrFI CCNGG 7 cut(s) 1194, 1488, 3549, 3576, 3686, 4637, 4787
SfcI CTRYAG 4 cut(s) 1076, 1901, 3175, 4410
SfoI GGCGCC 1 cut(s) 3878
Sfr274I CTCGAG 1 cut(s) 2373
SfuI TTCGAA 2 cut(s) 564, 1637
SinI GGWCC 3 cut(s) 123, 1270, 4456
SlaI CTCGAG 1 cut(s) 2373
SmiI ATTTAAAT 2 cut(s) 1413, 2790
SmiMI CAYNNNNRTG 6 cut(s) 2191, 2918, 3033, 4053, 4368, 4537
SmlI CTYRAG 6 cut(s) 1562, 1881, 2373, 2559, 2798, 3353
SmoI CTYRAG 6 cut(s) 1562, 1881, 2373, 2559, 2798, 3353
SphI GCATGC 1 cut(s) 1064
SseBI AGGCCT 2 cut(s) 2618, 3456
SsiI CCGC 6 cut(s) 1786, 2451, 2549, 2941, 3446, 3667
SspDI GGCGCC 1 cut(s) 3876
SspI AATATT 3 cut(s) 1234, 3346, 3898
SstI GAGCTC 1 cut(s) 628
StuI AGGCCT 2 cut(s) 2618, 3456
StyD4I CCNGG 7 cut(s) 1192, 1486, 3547, 3574, 3684, 4635, 4785
StyI CCWWGG 4 cut(s) 831, 2177, 3302, 3880
SwaI ATTTAAAT 2 cut(s) 1413, 2790
TaiI ACGT 2 cut(s) 866, 1501
TaqI TCGA 5 cut(s) 564, 1637, 2374, 2947, 4402
TatI WGTACW 2 cut(s) 1624, 3848
TseFI GTSAC 5 cut(s) 658, 859, 2278, 3412, 4283
TseI GCWGC 9 cut(s) 550, 674, 726, 1900, 2326, 2863, 3210, 3727, 4412
Tsp45I GTSAC 5 cut(s) 658, 859, 2278, 3412, 4283
TspGWI ACGGA 3 cut(s) 1348, 2754, 3126
Tth111I GACNNNGTC 1 cut(s) 1268
VneI GTGCAC 3 cut(s) 2194, 2961, 3483
VpaK11BI GGWCC 3 cut(s) 123, 1270, 4456
VspI ATTAAT 2 cut(s) 1095, 3657
XagI CCTNNNNNAGG 2 cut(s) 1881, 2541
XbaI TCTAGA 1 cut(s) 164
XceI RCATGY 4 cut(s) 1064, 2530, 2870, 3259
XcmI CCANNNNNNNNNTGG 1 cut(s) 3987
XhoI CTCGAG 1 cut(s) 2373
XmiI GTMKAC 1 cut(s) 2076
XmnI GAANNNNTTC 3 cut(s) 2439, 3583, 4654
ZrmI AGTACT 1 cut(s) 3850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.