Rh7DG340700

UDP-glucose glycoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0006844
Physical Location & Seq
Reverse (-)
44894364 .. 44919216
24853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG340700.1

Sequence Viewer

Length: 4884 bp
ATGGGGAGCCGTGCGTTTTGTGGTATTATCATCTTGATTTGTTTGGTTGGCTCGGTTTCGGTTTCGGTTTCGGTTTCAGCTCTGAATCGGAGGCCCAAGAATGTGCAGGTCGCCGTTCGGGCCAAGTGGTCCCCTACTCCATTGCTCCTAGAAGCTGGTGAATTGCTATCTAGAGAACAGAAAGATCATTTTTGGGAATTCATTGACATCTGGCATCATACTGATAAGGATGATCTTGATTCTTTTAATGCTAAGGGTTGCCTAAAAAAAATTTTGAAACATGGGCTCTCTATTTTGAGTGAACCATTGGCTTCTTTATTTGAATTCTCTCTTACATTGAGATCTGCATCCCCAAGATTGGTGCTTTACCGGCAATTAGCTGAAGAGTCTCTTTCATCTTTCCCACCAGTTGATGAAACTAATTCAAGAAATGCCAGCGGAAATTCAGAAACAAATGACCACTTGGAAAGTCAAAAGTCAGATCCTTTGAATGTTGGTCTAAACCCAAGAAGTCCTAATGGAAAATGTTGTTGGGTGGATACTGGAGATGCTCTGTTCTTTGATGCTGTAGACTTAAAAAGTTGGCTTAACAGTCCTAGAGATTCTTTTAGGGATTCATTTCAGCAGCCTGAACTCTTCGAATTTGACCACATCCACTTTGATTCAATTGTTGGAAGTCCAGTTGCTGTTCTTTATGGAGCTCTTGGAACTGAGTGCTTTAGGGAGTTTCATGTCACCCTAGTTGAAGCTGCAAAAGAGGGTAATGTTAAGTATGTGGTTAGGCAAGTATTACCTTCTGGCTGCGAAGCAGAGATTGACCGTTGTGGTGCTGTTGGTACAAAAGATTCGTTAAACTTGGGTGGTTATGGAGTTGAACTTGCTTTGAAGAACATGGAATATAAGGCCATGGATGATAGTGCAATAAAGAAAGGTGTCACGTTAGAAGATCCTCGGACTGAAGATCTCAGCCAAGAAGTCAGAGGGTTTATATTCTCTAAAATTCTGGAGCGTAAACCTGAACTCACATCAGAGATAATGGCTTTTAGGGATTATCTTTTGTCATCAACAGTATCTGATACACTTGATGTTTGGGAACTAAAAGATTTAGGACATCAAACTGCACAGAGGATAGTGCATGCCACTGATCCTCTGCGGTCAATGCAAGAAATTAATCAAAACTTTCCCAGTGTTGTCTCTTCCTTATCTCGCATGAAGCTCAATGATTCAGTTAAGGATGAAATTACTGCAAACCAGAGAATGATTCCACCTGGAAAGTCCTTGATGGCTCTGAATGGTGCTTTAGTCAATATTGAAGATATTGACCTTTATCTGTTGGTTGACTTGGTCCATCAGGATTTATTATTGGCTGATCACTTTTCAAAGTTGAAGATACCTCATAGCACTGTACGGAAACTCCTGTCAACTCTGCCTCCTCCAGAATCTAATATGTTGCGTGTAGATTTTCGCTCAAATCTTGTTCATTATTTAAATAACTTGGAAGAAGATGCTATGTATAAGCGTTGGAGGAGCAATCTTAATGAGATTTTGATGCCAGTGTTCCCTGGACAGCTACGTTATATACGCAAAAACCTTTTCCATGCTGTTTCTGTTATTGATCCATCAACTGTTTGTGGTCTTGAGTCTATTGATATGCTTATTTCTTTGTATGAGAATAACTTTCCCATGAGATTTGGGGTTGTACTGTATTCTTCGAAGTTGATCAAGCAAATTGAAACTAGCAGTGATGATAGTAAAATTGAGGAGGATATATCGAACCTGATAATACGCCTCTTTATTTATATCAAGGAAAATCATGGAATTCAAACAGCTTTCCAATTTTTGAGCAATATAAATAAATTGCGGGTTGAGTCTGATGGTTCGGCTGATGATATTGAAATGCACTATGTAGAAGGAGCATTTGTAGAAACAGTATTACCAAAGGTAAAATCTCCTCCTCAAGGCATACTGCTGAAGCTGCAGAAGGAGCAAACTTACAAGGAACTTGCACATGAAAGCACCATGTTTGTCTTTAAGCTGGGCTTGGCTAAGCTTCAGTGCAGTTTGCTGATGAATGGACTCGTGTTGGATTCTAGTGAGGAGGCTCTTATAAATTCCATGAACGATGAGATGCCCAGAATACAGGAGCAAGTATACTATGGCCATATAAATTCTCAAACAAATGTTCTTGACAAGTTTTTGTCAGAAAGTGGTACCACTCGCTATAATCCACAGATTATTGCCGGTGGAAAACCAAGGTTCACATCTCTGTGCACATCTGTTCTTGGAGGGGAAGGTGTCTTCAATGATATTGGTTATTTGCATTCCCCCGAAACTGTGGATGATTTGAAGCCTGTGACTCATCTTCTAGTGGTTGATGTTGCATCAAAGAAAGGGATGAAGCTGCTTCATGAAGCCTTACACTATCTGATTGAAGGGTCTAATAGGGCTCGAGTAGGAGTGCTTTTCGGTGTCAATCAGGGTGCTGATCTTTCTAGTCTCCTTTTTGTTGAAGTATTTCAAATCACCGCATCATTGCACAGCCACAAGAAGGATGTGTTACTTTTCTTGGATCAGGTGTGCTCCTTGTTTGAACATAATCACATGCTTGCACCGTCTGAAGGTGCGGAGAGCACTCAAGCATTCATAGATAAAGTTTCTGAATTGGCTGAGACAAATGGGTTATCATCAAAGGCCTATAAATCAGCTCTTTCAGACTTTTCTGCTGACAAATTGAGAAAACAGTTGAATAAGGTGGCACAGTTTTTATATAGGCAACTTGGCCTTGATTCTGGTGTTAATGCAGTCATTACTAACGGACGGGTAACGGTTGTAAATGAGGAGAGCACATTGTTGAGCCATGATTTAAATCTTCTCGAGTCTCTGGAGTTTACACAGAGAATAAAGCATATTGTTGAAATAATAGAAGAAGTGAAGTGGCAGCATGTAGATCCAGACACACTGACAAGCAAATTCATTAGTGATACTATCATGTTTGTGTCTTCTTCAATGGCCATGCGGGATCGAAGTTCTGAAGGTGCACGCTTTGAGGTTTTGAATGCAGAATATAGTGCCATCGTTCTGAACAATGAAAATTCTAGTATCCATATAGATGCAGTTATTGATCCTTTAAGTCCATCTGGCCAGAAGCTATCATCAATTCTTCGGGTTCTATGGAAATATGTTCAGCCTAGCATGAGAATTGTATTAAATCCGTTGAGTTCTCTTGTTGATCTTCCTCTGAAGAATTACTACAGATATGTAGTACCAACAGTGGATGACTTCAGCAGCACTGACTACACAGTAAATGGGCCAAAAGCCTTTTTTGCAAACATGCCACTGTCCAAAACCCTCACTATGAATCTTGATGTTCCTGATCCATGGCTTGTTGAGCCTGTTATTGCAGTGCATGACTTGGATAATATTTTGCTTGAGAATCTTGGTGAGACAAGAACATTACAAGCTGTTTTTGAACTTGAAGCTCTTGTTTTGACGGGTCATTGTTCTGAGAAAGATCATGATCCGCCCAGAGGCCTTCAGTTAATTATTGGTACCAAGAGTGCACCCCATTTGGTTGATACTCTTGTGATGGCCAATCTGGGTTATTGGCAAATGAAAGTCTCTCCTGGTGTTTGGTACCTACAACTTGCTCCAGGAAGAAGTTCTGAGCTTTATGTTTTAAAAGAGGATGGTGATGGAAGTGAGAGCAAAACGTTATCAAAACGCATCACCATTAATGATCTGCGGGGTAGAGTAGTTCACCTGGAAGTAGTAAAGAAAAAGGGAAAGGAGCATGAAAAATTGCTGCTTTCTGATGTTAATGACAAGACACAGGATGCTACCGAGGGAAGTAGCTGGAACTCCAACTTTATAAAATGGGCTTCTGGTTTAATTGGTGGCAGTGAGCACTCAAAACAGAGTGAAAGTACTTTATCGGAGAAAGGAAAAGGCGGGCGCCATGGAAAAACAATAAATATTTTTTCTATTGCTTCTGGACACCTATACGAACGGTTTTTGAAAATCATGATTTTAAGTGTCTTGAAGAACACCCGTCGTCCAGTTAAATTCTGGTTCATAAAGAACTATCTCTCTCCTCAGTTCAAGGATGTGATTCCACATATGGCTCATGAATATGGCTTTGAGTATCAGCTAATCACCTACAAGTGGCCTACATGGTTGCACAAGCAAAAAGAAAAGCAACGAATTATTTGGGCCTATAAAATTTTGTTCCTTGATGTTATATTCCCCCTTTCGTTAGAAAAGGTCATCTTTGTTGATGCAGATCAGATCGTCAGGGCAGACATGGGAGAACTCTATGACATGGATATAAAAGGAAGACCGCTGGCATATACTCCTTTCTGTGACAACAACAAGGATATGGATGGATATCGGTTTTGGAGACAAGGTTTCTGGAAAGAACATTTACGGGGGAGATCTTATCATATAAGTGCTTTGTATGTCGTTGATTTGAAGAAATTTCGAGAGACTGCAGCAGGAGATAATCTGAGAGTTTTCTATGAGACTCTTAGCAAGGACCCAAATAGTCTTTCAAATTTGGATCAGGATCTTCCAAACTATGCTCAACATACAGTGCCCATATTTTCATTACCACAAGAATGGCTTTGGTGTGAGTCATGGTGTGGTAATGCCACAAAAGCCAAAGCAAAAACCATAGATCTTTGCAACAACCCAATGACAAAGGAACCCAAGCTCCAGGGTGCCAGAAGAATAGTTTCTGAGTGGCCAGATCTTGATTTGGAGGCTAGGCAGTTCACTGCGAAAATCTTAGGTGATGAAGTCGCAATCCAAGAACCTCCACCAGATCCTAATCAATCAGGATCAGTGATGGATAGCCCACCAGACCTGGAATCTAAGGCAGAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003980 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006011 GO:0006139 GO:0006457 GO:0006458 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006515 GO:0006725 GO:0006793 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008219 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009225 GO:0009626 GO:0009719 GO:0009725 GO:0009751 GO:0009812 GO:0009987 GO:0010033 GO:0010204 GO:0010243 GO:0010498 GO:0012501 GO:0012505 GO:0014070 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0023052 GO:0030163 GO:0030968 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0034620 GO:0034641 GO:0034645 GO:0034976 GO:0035251 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0042221 GO:0042440 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046527 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051084 GO:0051603 GO:0051716 GO:0051788 GO:0055086 GO:0065007 GO:0070085 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0080134 GO:0097359 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Glyco_transf_8 UDP-g_GGTase

Protein Analysis

1627

Amino Acids

183.38

Weight (kDa)

5.68

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin_12 PF18400 46 - 270 4.5e-48 Thioredoxin-like domain
Thioredoxin_13 PF18401 359 - 474 5.5e-33 Thioredoxin-like domain
Thioredoxin_14 PF18402 487 - 745 4e-57 Thioredoxin-like domain
Thioredoxin_15 PF18403 765 - 1004 7.5e-41 Thioredoxin-like domain
UDP-g_GGTase PF06427 1165 - 1268 5.2e-29 UDP-glucose:Glycoprotein Glucosyltransferase
Glyco_transf_24 PF18404 1323 - 1589 6.9e-144 Glucosyltransferase 24
Glyco_transf_8 PF01501 1334 - 1546 1.4e-07 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2108, 3869
Acc36I ACCTGC 1 cut(s) 97
Acc65I GGTACC 3 cut(s) 2210, 3548, 3633
AccB1I GGYRCC 5 cut(s) 2210, 3548, 3633, 3951, 4715
AccI GTMKAC 2 cut(s) 570, 2151
AclI AACGTT 1 cut(s) 3710
AcoI YGGCCR 5 cut(s) 2158, 3009, 3139, 3588, 4739
AcuI CTGAAG 9 cut(s) 402, 978, 1991, 2036, 2637, 3051, 3260, 3265, 3518
AcyI GRCGYC 1 cut(s) 3952
AfaI GTAC 8 cut(s) 838, 1407, 1701, 2212, 3264, 3550, 3635, 3925
AfiI CCNNNNNNNGG 6 cut(s) 358, 1958, 2548, 2618, 3527, 4161
AjnI CCWGG 7 cut(s) 1267, 1561, 3622, 3649, 3759, 4710, 4860
AjuI GAANNNNNNNTTGG 4 cut(s) 514, 546, 4528, 4560
AloI GAACNNNNNNTCC 2 cut(s) 4692, 4724
Alw21I GWGCWC 8 cut(s) 703, 2273, 2582, 2633, 2846, 3040, 3562, 3906
Alw44I GTGCAC 3 cut(s) 2269, 3036, 3558
AlwNI CAGNNNCTG 2 cut(s) 686, 1073
Ama87I CYCGRG 2 cut(s) 2448, 2873
ApaLI GTGCAC 3 cut(s) 2269, 3036, 3558
ApeKI GCWGC 9 cut(s) 625, 749, 801, 1975, 2401, 2938, 3285, 3802, 4487
AseI ATTAAT 2 cut(s) 1170, 3732
Asp700I GAANNNNTTC 3 cut(s) 2514, 3658, 4729
Asp718I GGTACC 3 cut(s) 2210, 3548, 3633
AspLEI GCGC 1 cut(s) 3954
AspS9I GGNCC 7 cut(s) 93, 120, 129, 1345, 3308, 4209, 4531
AsuHPI GGTGA 9 cut(s) 170, 727, 2515, 3452, 3701, 3718, 3749, 4144, 4799
AsuII TTCGAA 2 cut(s) 639, 1712
AvaI CYCGRG 2 cut(s) 2448, 2873
AvaII GGWCC 3 cut(s) 129, 1345, 4531
BaeGI GKGCMC 4 cut(s) 2273, 3040, 3562, 4593
BaeI ACNNNNGTAYC 2 cut(s) 3567, 3600
BalI TGGCCA 5 cut(s) 2160, 3011, 3141, 3590, 4741
BanI GGYRCC 5 cut(s) 2210, 3548, 3633, 3951, 4715
BanII GRGCYC 3 cut(s) 288, 703, 2449
BarI GAAGNNNNNNTAC 2 cut(s) 3233, 3265
BauI CACGAG 1 cut(s) 2078
BbsI GAAGAC 3 cut(s) 2290, 2991, 4339
Bbv12I GWGCWC 8 cut(s) 703, 2273, 2582, 2633, 2846, 3040, 3562, 3906
BbvI GCAGC 9 cut(s) 637, 736, 788, 1962, 2388, 2950, 3297, 3789, 4499
BceAI ACGGC 1 cut(s) 98
BciT130I CCWGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
BciVI GTATCC 2 cut(s) 532, 3110
BclI TGATCA 2 cut(s) 1369, 1719
BfmI CTRYAG 4 cut(s) 567, 1976, 3250, 4485
BfoI RGCGCY 1 cut(s) 3955
BfuAI ACCTGC 1 cut(s) 97
BfuI GTATCC 2 cut(s) 532, 3110
BglI GCCNNNNNGGC 1 cut(s) 119
BglII AGATCT 5 cut(s) 341, 961, 4430, 4672, 4744
BisI GCNGC 9 cut(s) 626, 750, 802, 1976, 2402, 2939, 3286, 3803, 4488
BlpI GCTNAGC 1 cut(s) 2046
BlsI GCNGC 9 cut(s) 627, 751, 803, 1977, 2403, 2940, 3287, 3804, 4489
BmcAI AGTACT 1 cut(s) 3925
Bme1390I CCNGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
Bme18I GGWCC 3 cut(s) 129, 1345, 4531
BmeT110I CYCGRG 2 cut(s) 2448, 2873
BmgT120I GGNCC 7 cut(s) 93, 120, 129, 1345, 3308, 4209, 4531
BmiI GGNNCC 9 cut(s) 8, 131, 2212, 3550, 3635, 3953, 4533, 4701, 4717
BmrFI CCNGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
BmrI ACTGGG 1 cut(s) 1179
BmuI ACTGGG 1 cut(s) 1179
BpiI GAAGAC 3 cut(s) 2290, 2991, 4339
BpmI CTGGAG 6 cut(s) 564, 1025, 1419, 2903, 3633, 4694
Bpu10I CCTNAGC 1 cut(s) 252
Bpu1102I GCTNAGC 1 cut(s) 2046
Bpu14I TTCGAA 2 cut(s) 639, 1712
BpuEI CTTGAG 4 cut(s) 1658, 1941, 2619, 3449
BsaBI GATNNNNATC 7 cut(s) 346, 2865, 3516, 4278, 4383, 4560, 4824
BsaHI GRCGYC 1 cut(s) 3952
BsaJI CCNNGG 8 cut(s) 906, 950, 1561, 2252, 3377, 3840, 3955, 4711
Bsc4I CCNNNNNNNGG 6 cut(s) 358, 1958, 2548, 2618, 3527, 4161
Bse118I RCCGGY 2 cut(s) 369, 2240
Bse1I ACTGG 6 cut(s) 407, 547, 680, 1185, 1553, 4055
Bse3DI GCAATG 2 cut(s) 140, 2531
Bse8I GATNNNNATC 7 cut(s) 346, 2865, 3516, 4278, 4383, 4560, 4824
BseBI CCWGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
BseDI CCNNGG 8 cut(s) 906, 950, 1561, 2252, 3377, 3840, 3955, 4711
BseJI GATNNNNATC 7 cut(s) 346, 2865, 3516, 4278, 4383, 4560, 4824
BseLI CCNNNNNNNGG 6 cut(s) 358, 1958, 2548, 2618, 3527, 4161
BseMI GCAATG 2 cut(s) 140, 2531
BseMII CTCAG 8 cut(s) 702, 979, 2658, 3495, 3654, 4106, 4493, 4725
BseNI ACTGG 6 cut(s) 407, 547, 680, 1185, 1553, 4055
BseRI GAGGAG 8 cut(s) 1422, 1540, 1775, 1941, 1944, 2111, 2852, 4080
BseSI GKGCMC 4 cut(s) 2273, 3040, 3562, 4593
BseXI GCAGC 9 cut(s) 637, 736, 788, 1962, 2388, 2950, 3297, 3789, 4499
BseYI CCCAGC 1 cut(s) 2035
BsgI GTGCAG 3 cut(s) 125, 1104, 2077
BshNI GGYRCC 5 cut(s) 2210, 3548, 3633, 3951, 4715
BsiHKAI GWGCWC 8 cut(s) 703, 2273, 2582, 2633, 2846, 3040, 3562, 3906
BsiHKCI CYCGRG 2 cut(s) 2448, 2873
BsiSI CCGG 2 cut(s) 370, 2241
BslFI GGGAC 1 cut(s) 115
BslI CCNNNNNNNGG 6 cut(s) 358, 1958, 2548, 2618, 3527, 4161
BsmFI GGGAC 1 cut(s) 115
BsmI GAATGC 3 cut(s) 2320, 2639, 3061
BsoBI CYCGRG 2 cut(s) 2448, 2873
Bsp119I TTCGAA 2 cut(s) 639, 1712
Bsp1720I GCTNAGC 1 cut(s) 2046
Bsp19I CCATGG 3 cut(s) 906, 3377, 3955
BspCNI CTCAG 8 cut(s) 703, 978, 2659, 3496, 3655, 4105, 4494, 4726
BspHI TCATGA 4 cut(s) 2407, 3514, 4020, 4123
BspLI GGNNCC 9 cut(s) 8, 131, 2212, 3550, 3635, 3953, 4533, 4701, 4717
BspMAI CTGCAG 2 cut(s) 1980, 4489
BspMI ACCTGC 1 cut(s) 97
BspT104I TTCGAA 2 cut(s) 639, 1712
BspT107I GGYRCC 5 cut(s) 2210, 3548, 3633, 3951, 4715
BsrDI GCAATG 2 cut(s) 140, 2531
BsrFI RCCGGY 2 cut(s) 369, 2240
BsrI ACTGG 6 cut(s) 407, 547, 680, 1185, 1553, 4055
BssAI RCCGGY 2 cut(s) 369, 2240
BssECI CCNNGG 8 cut(s) 906, 950, 1561, 2252, 3377, 3840, 3955, 4711
BssNAI GTATAC 1 cut(s) 2152
BssNI GRCGYC 1 cut(s) 3952
BssSI CACGAG 1 cut(s) 2078
BssT1I CCWWGG 4 cut(s) 906, 2252, 3377, 3955
Bst1107I GTATAC 1 cut(s) 2152
Bst2BI CACGAG 1 cut(s) 2078
Bst2UI CCWGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
Bst6I CTCTTC 3 cut(s) 378, 641, 1201
BstACI GRCGYC 1 cut(s) 3952
BstBI TTCGAA 2 cut(s) 639, 1712
BstC8I GCNNGC 6 cut(s) 436, 1137, 2607, 3040, 3950, 4341
BstDSI CCRYGG 3 cut(s) 906, 3377, 3955
BstENI CCTNNNNNAGG 1 cut(s) 1956
BstH2I RGCGCY 1 cut(s) 3955
BstHHI GCGC 1 cut(s) 3954
BstMWI GCNNNNNNNGC 8 cut(s) 119, 370, 1159, 1975, 1984, 3323, 3388, 4652
BstNI CCWGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
BstNSI RCATGY 4 cut(s) 1139, 2605, 2945, 3334
BstSCI CCNGG 7 cut(s) 1267, 1561, 3622, 3649, 3759, 4710, 4860
BstSFI CTRYAG 4 cut(s) 567, 1976, 3250, 4485
BstSLI GKGCMC 4 cut(s) 2273, 3040, 3562, 4593
BstV1I GCAGC 9 cut(s) 637, 736, 788, 1962, 2388, 2950, 3297, 3789, 4499
BstV2I GAAGAC 3 cut(s) 2290, 2991, 4339
BstXI CCANNNNNNTGG 1 cut(s) 4614
BstZ17I GTATAC 1 cut(s) 2152
BsuI GTATCC 2 cut(s) 532, 3110
BtgI CCRYGG 3 cut(s) 906, 3377, 3955
BtsI GCAGTG 4 cut(s) 1747, 3408, 3904, 4770
BveI ACCTGC 1 cut(s) 97
Cac8I GCNNGC 6 cut(s) 436, 1137, 2607, 3040, 3950, 4341
CaiI CAGNNNCTG 2 cut(s) 686, 1073
CciI TCATGA 4 cut(s) 2407, 3514, 4020, 4123
CfoI GCGC 1 cut(s) 3954
Cfr10I RCCGGY 2 cut(s) 369, 2240
Cfr13I GGNCC 7 cut(s) 93, 120, 129, 1345, 3308, 4209, 4531
Csp6I GTAC 8 cut(s) 837, 1406, 1700, 2211, 3263, 3549, 3634, 3924
CviQI GTAC 8 cut(s) 837, 1406, 1700, 2211, 3263, 3549, 3634, 3924
DinI GGCGCC 1 cut(s) 3953
DraI TTTAAA 3 cut(s) 1488, 2865, 3678
EaeI YGGCCR 5 cut(s) 2158, 3009, 3139, 3588, 4739
Eam1104I CTCTTC 3 cut(s) 378, 641, 1201
EarI CTCTTC 3 cut(s) 378, 641, 1201
EciI GGCGGA 1 cut(s) 3510
Ecl136II GAGCTC 1 cut(s) 701
Eco130I CCWWGG 4 cut(s) 906, 2252, 3377, 3955
Eco147I AGGCCT 2 cut(s) 2693, 3531
Eco24I GRGCYC 3 cut(s) 288, 703, 2449
Eco32I GATATC 1 cut(s) 4385
Eco47I GGWCC 3 cut(s) 129, 1345, 4531
Eco53kI GAGCTC 1 cut(s) 701
Eco57I CTGAAG 9 cut(s) 402, 978, 1991, 2036, 2637, 3051, 3260, 3265, 3518
Eco88I CYCGRG 2 cut(s) 2448, 2873
EcoICRI GAGCTC 1 cut(s) 701
EcoNI CCTNNNNNAGG 1 cut(s) 1956
EcoO109I RGGNCCY 1 cut(s) 4531
EcoRI GAATTC 3 cut(s) 197, 323, 1818
EcoRII CCWGG 7 cut(s) 1267, 1561, 3622, 3649, 3759, 4710, 4860
EcoRV GATATC 1 cut(s) 4385
EcoT14I CCWWGG 4 cut(s) 906, 2252, 3377, 3955
EcoT38I GRGCYC 3 cut(s) 288, 703, 2449
EgeI GGCGCC 1 cut(s) 3953
EheI GGCGCC 1 cut(s) 3953
ErhI CCWWGG 4 cut(s) 906, 2252, 3377, 3955
FalI AAGNNNNNCTT 8 cut(s) 375, 407, 2024, 2056, 4250, 4282, 4602, 4634
FaqI GGGAC 1 cut(s) 115
FauI CCCGC 4 cut(s) 1854, 3009, 3735, 3941
FauNDI CATATG 1 cut(s) 4116
FbaI TGATCA 2 cut(s) 1369, 1719
FblI GTMKAC 2 cut(s) 570, 2151
Fnu4HI GCNGC 9 cut(s) 626, 750, 802, 1976, 2402, 2939, 3286, 3803, 4488
FriOI GRGCYC 3 cut(s) 288, 703, 2449
Fsp4HI GCNGC 9 cut(s) 626, 750, 802, 1976, 2402, 2939, 3286, 3803, 4488
GlaI GCGC 1 cut(s) 3953
GluI GCNGC 9 cut(s) 626, 750, 802, 1976, 2402, 2939, 3286, 3803, 4488
GsaI CCCAGC 1 cut(s) 2039
GsuI CTGGAG 6 cut(s) 564, 1025, 1419, 2903, 3633, 4694
HaeII RGCGCY 1 cut(s) 3955
HapII CCGG 2 cut(s) 370, 2241
HhaI GCGC 1 cut(s) 3954
Hin1I GRCGYC 1 cut(s) 3952
Hin6I GCGC 1 cut(s) 3952
HinP1I GCGC 1 cut(s) 3952
HincII GTYRAC 2 cut(s) 1339, 1422
HindII GTYRAC 2 cut(s) 1339, 1422
HindIII AAGCTT 1 cut(s) 2048
HpaII CCGG 2 cut(s) 370, 2241
HphI GGTGA 9 cut(s) 170, 727, 2515, 3452, 3701, 3718, 3749, 4144, 4799
Hpy99I CGWCG 1 cut(s) 4053
HpyAV CCTTC 9 cut(s) 804, 1904, 1975, 2285, 2426, 2542, 2612, 3026, 3542
HpyCH4IV ACGT 3 cut(s) 938, 1573, 3710
HpyF10VI GCNNNNNNNGC 8 cut(s) 119, 370, 1159, 1975, 1984, 3323, 3388, 4652
HpySE526I ACGT 3 cut(s) 938, 1573, 3710
Hsp92I GRCGYC 1 cut(s) 3952
HspAI GCGC 1 cut(s) 3952
KasI GGCGCC 1 cut(s) 3951
KpnI GGTACC 3 cut(s) 2214, 3552, 3637
Ksp22I TGATCA 2 cut(s) 1369, 1719
Lsp1109I GCAGC 9 cut(s) 637, 736, 788, 1962, 2388, 2950, 3297, 3789, 4499
MaeII ACGT 3 cut(s) 938, 1573, 3710
MaeIII GTNAC 6 cut(s) 733, 934, 2353, 2556, 2821, 4358
MfeI CAATTG 1 cut(s) 666
MlsI TGGCCA 5 cut(s) 2160, 3011, 3141, 3590, 4741
MluNI TGGCCA 5 cut(s) 2160, 3011, 3141, 3590, 4741
Mly113I GGCGCC 1 cut(s) 3952
MlyI GAGTC 8 cut(s) 395, 1649, 1877, 2070, 2350, 2885, 4513, 4637
MmeI TCCRAC 4 cut(s) 652, 1502, 2064, 3885
Mox20I TGGCCA 5 cut(s) 2160, 3011, 3141, 3590, 4741
MroXI GAANNNNTTC 3 cut(s) 2514, 3658, 4729
MscI TGGCCA 5 cut(s) 2160, 3011, 3141, 3590, 4741
MslI CAYNNNNRTG 6 cut(s) 2266, 2993, 3108, 4128, 4443, 4612
Msp20I TGGCCA 5 cut(s) 2160, 3011, 3141, 3590, 4741
MspA1I CMGCKG 2 cut(s) 438, 4339
MspI CCGG 2 cut(s) 370, 2241
MspR9I CCNGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
MunI CAATTG 1 cut(s) 666
Mva1269I GAATGC 3 cut(s) 2320, 2639, 3061
MvaI CCWGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
MwoI GCNNNNNNNGC 8 cut(s) 119, 370, 1159, 1975, 1984, 3323, 3388, 4652
NarI GGCGCC 1 cut(s) 3952
NcoI CCATGG 3 cut(s) 906, 3377, 3955
NdeI CATATG 1 cut(s) 4116
NlaIV GGNNCC 9 cut(s) 8, 131, 2212, 3550, 3635, 3953, 4533, 4701, 4717
NmuCI GTSAC 4 cut(s) 733, 934, 2353, 4358
NspI RCATGY 4 cut(s) 1139, 2605, 2945, 3334
NspV TTCGAA 2 cut(s) 639, 1712
PaeI GCATGC 1 cut(s) 1139
PaeR7I CTCGAG 2 cut(s) 2448, 2873
PagI TCATGA 4 cut(s) 2407, 3514, 4020, 4123
PceI AGGCCT 2 cut(s) 2693, 3531
PctI GAATGC 3 cut(s) 2320, 2639, 3061
PdmI GAANNNNTTC 3 cut(s) 2514, 3658, 4729
PflFI GACNNNGTC 1 cut(s) 1343
PfoI TCCNGGA 1 cut(s) 3649
PkrI GCNGC 9 cut(s) 627, 751, 803, 1977, 2403, 2940, 3287, 3804, 4489
PleI GAGTC 8 cut(s) 394, 1648, 1876, 2070, 2350, 2884, 4513, 4636
PluTI GGCGCC 1 cut(s) 3955
PpsI GAGTC 8 cut(s) 394, 1648, 1876, 2070, 2350, 2884, 4513, 4636
PpuMI RGGWCCY 1 cut(s) 4531
PshBI ATTAAT 2 cut(s) 1170, 3732
PsiI TTATAA 2 cut(s) 2108, 3869
Psp124BI GAGCTC 1 cut(s) 703
Psp1406I AACGTT 1 cut(s) 3710
Psp5II RGGWCCY 1 cut(s) 4531
Psp6I CCWGG 7 cut(s) 1267, 1561, 3622, 3649, 3759, 4710, 4860
PspFI CCCAGC 1 cut(s) 2035
PspGI CCWGG 7 cut(s) 1267, 1561, 3622, 3649, 3759, 4710, 4860
PspN4I GGNNCC 9 cut(s) 8, 131, 2212, 3550, 3635, 3953, 4533, 4701, 4717
PspPI GGNCC 7 cut(s) 93, 120, 129, 1345, 3308, 4209, 4531
PspPPI RGGWCCY 1 cut(s) 4531
PspXI VCTCGAGB 1 cut(s) 2448
PstI CTGCAG 2 cut(s) 1980, 4489
PstNI CAGNNNCTG 2 cut(s) 686, 1073
PsyI GACNNNGTC 1 cut(s) 1343
RsaI GTAC 8 cut(s) 838, 1407, 1701, 2212, 3264, 3550, 3635, 3925
RsaNI GTAC 8 cut(s) 837, 1406, 1700, 2211, 3263, 3549, 3634, 3924
RseI CAYNNNNRTG 6 cut(s) 2266, 2993, 3108, 4128, 4443, 4612
SacI GAGCTC 1 cut(s) 703
SatI GCNGC 9 cut(s) 626, 750, 802, 1976, 2402, 2939, 3286, 3803, 4488
Sau96I GGNCC 7 cut(s) 93, 120, 129, 1345, 3308, 4209, 4531
ScaI AGTACT 1 cut(s) 3925
SchI GAGTC 8 cut(s) 395, 1649, 1877, 2070, 2350, 2885, 4513, 4637
ScrFI CCNGG 7 cut(s) 1269, 1563, 3624, 3651, 3761, 4712, 4862
SfcI CTRYAG 4 cut(s) 567, 1976, 3250, 4485
SfoI GGCGCC 1 cut(s) 3953
Sfr274I CTCGAG 2 cut(s) 2448, 2873
SfuI TTCGAA 2 cut(s) 639, 1712
SinI GGWCC 3 cut(s) 129, 1345, 4531
SlaI CTCGAG 2 cut(s) 2448, 2873
SmiI ATTTAAAT 2 cut(s) 1488, 2865
SmiMI CAYNNNNRTG 6 cut(s) 2266, 2993, 3108, 4128, 4443, 4612
SmlI CTYRAG 6 cut(s) 1637, 1956, 2448, 2634, 2873, 3428
SmoI CTYRAG 6 cut(s) 1637, 1956, 2448, 2634, 2873, 3428
SphI GCATGC 1 cut(s) 1139
SseBI AGGCCT 2 cut(s) 2693, 3531
SspDI GGCGCC 1 cut(s) 3951
SspI AATATT 3 cut(s) 1309, 3421, 3973
SstI GAGCTC 1 cut(s) 703
StuI AGGCCT 2 cut(s) 2693, 3531
StyD4I CCNGG 7 cut(s) 1267, 1561, 3622, 3649, 3759, 4710, 4860
StyI CCWWGG 4 cut(s) 906, 2252, 3377, 3955
SwaI ATTTAAAT 2 cut(s) 1488, 2865
TaiI ACGT 3 cut(s) 941, 1576, 3713
TaqI TCGA 7 cut(s) 639, 1712, 1772, 2449, 2874, 3022, 4477
TatI WGTACW 2 cut(s) 1699, 3923
TseFI GTSAC 4 cut(s) 733, 934, 2353, 4358
TseI GCWGC 9 cut(s) 625, 749, 801, 1975, 2401, 2938, 3285, 3802, 4487
Tsp45I GTSAC 4 cut(s) 733, 934, 2353, 4358
TspGWI ACGGA 3 cut(s) 1423, 2829, 3201
Tth111I GACNNNGTC 1 cut(s) 1343
VneI GTGCAC 3 cut(s) 2269, 3036, 3558
VpaK11BI GGWCC 3 cut(s) 129, 1345, 4531
VspI ATTAAT 2 cut(s) 1170, 3732
XagI CCTNNNNNAGG 1 cut(s) 1956
XbaI TCTAGA 1 cut(s) 170
XceI RCATGY 4 cut(s) 1139, 2605, 2945, 3334
XcmI CCANNNNNNNNNTGG 1 cut(s) 4062
XhoI CTCGAG 2 cut(s) 2448, 2873
XmiI GTMKAC 2 cut(s) 570, 2151
XmnI GAANNNNTTC 3 cut(s) 2514, 3658, 4729
ZrmI AGTACT 1 cut(s) 3925
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.