Rmu_sc0028875.1_g000001

WD40-like Beta Propeller Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0028875.1
OG0016112
Physical Location & Seq
Reverse (-)
1375 .. 3459
2085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0028875.1_g000001.1.cds

Sequence Viewer

Length: 2085 bp
atgaaacccaattcaattctccatttgttgctccatttgctggtgcttagtttctgtttagcggcggaacatggcccttccagcatcgtcttcaccaccaacggcagattagattactatttcgacatcttcaccctcccgatcggtcacccaaccaccgagacccgaatcacagatggccagtccgtcaacttcaacggccacttcccctcctccactttctttcccaaccaaacccgaatccgatcccccacccgacccgacccctctctccagattatctacgtcaccgagagaaacggcttttccaacatctactacgacgccgtttacttcgattctccgtcgagcatcaggaaaaggtccgcccttgaagtcgtggaccgggttcaggtccctctgctgggcttggacggggtttcgatgaaagacaagcccagtttgacaggggagtatttggtgtacgtgtccacccacgaagactccggcgtgcccaggacgagttcagctgcggtttactcaaccgagttgaacaccggtttgacccggaggctgactccttacggcgtcgcggacttcagccccgcggtgtcgccgtctggggtttggacggcggcggcgtcgtatgggccgaaaggttgggacggcgacgtcgaggagctcagtacagacatctacgtgttcttgactcgggacgggacgcgccgagtcagggtggttgaacacggcggctggccgagttgggttgacgagtcaacgatttactttcacagaagaggagaagaccagtggtggagtatttatcgggcgattttaccgagagggggcccgatttctaccgagtcagtggtggtggagcgagttacgccgccgggtctccacgcgttcacacccgccacgtcaccggggaaccacgacttcatcgccgtggccacgagaagacccaccacgagcttccgtcacgtggagctgttcgacttggtgaagggcgagttcaaggagctgactcggctcgtcgcgccgcgtacccaccactacaacccgttcatctcccccgattcgagtcgggtcgggtaccacaagtgcagaggcaacgcgaacgggaagaaaagcccaaagctttttcttcagaatatccacagctcaattccgaacctgtccgtgctcagaatcgacggtacgttcccttcgttttcacccgcaggtgaccgtatcgccttcgcgaacttaccgggtatctacgtggtgaaccgcgacggttcgaaccggcgacaggtctaccctggaaaagctttcccgaccacctgggacccggttcgcaagggcgtcatatacaccggtgccggaccggaatttgcaccggagagcgctgaggttgatatcatctccatcgacgttgaccaaatcgctttcaagaagttgaccacaaacgggaagaacaacgccttcccttcaccctcgcccaacggaaagcggatcgtcttccggtcgggtctgtcgggtcacaaaaacctgtacataatggacgccgaggaaggtgagacacttgggctccagagactgacggagggtccatggacggacacgatgtgtaactggtcgccggacggcgactggatcgcgttcgcgtcggaccgggagaacccgggtagcgggagcttcgagttgtacgtgatccacccgaatggaaccgggttgaggaaagtgatccaaagcgggtcgggtggacggactaaccacccgtggttcagcccggatgggaagagcttggttttcacttcggattatgggggcatatcagctgagcccatctcaaacccgcatcattaccagccgtacggtgagatttttactgtgaaattggacggctctgatgttacgaggttgacacagaattcgtttgaggatggaacaccggtgtgggtccccagcttcatcaggccgtcggatgtagagtggcctattgataggcctagctgcagctttgatgatttgcactgcctcggtgattttcctagccatggtcagaatggtggtgttggggctgttccttggctcttaagcaagcctcaatgtggtgcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PD40

Protein Analysis

694

Amino Acids

76.61

Weight (kDa)

6.35

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016112)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21680
fragaria_vesca FvH4_2g27620
malus_domestica MD15G1344100.v1.1
prunus_persica Prupe.1G491500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0296441
rosa_laevigata RLG00000011693
rosa_multiflora Rmu_sc0028875.1_g000001
rosa_roxburghii Rroxscaffold_7G00171530 Rroxscaffold_7G00178600
rosa_rugosa Rorug06G0262400
rosa_samantha Rh6AG373600 Rh6BG382400 Rh6CG387200 Rh6DG374900
rosa_wichuraiana Rw6G032600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1193
AasI GACNNNNNNGTC 1 cut(s) 650
AatII GACGTC 1 cut(s) 654
Acc36I ACCTGC 1 cut(s) 1193
Acc65I GGTACC 1 cut(s) 1074
AccB1I GGYRCC 2 cut(s) 1074, 1340
AccB7I CCANNNNNTGG 1 cut(s) 40
AccI GTMKAC 1 cut(s) 1278
AclWI GGATC 5 cut(s) 240, 1484, 1625, 1669, 1702
AcoI YGGCCR 4 cut(s) 178, 199, 734, 930
AcsI RAATTY 2 cut(s) 1352, 1894
AcuI CTGAAG 2 cut(s) 562, 1112
AcvI CACGTG 1 cut(s) 964
AcyI GRCGYC 6 cut(s) 324, 567, 620, 651, 1326, 1527
AdeI CACNNNGTG 1 cut(s) 1590
AfaI GTAC 8 cut(s) 464, 667, 1027, 1076, 1180, 1517, 1670, 1838
AfeI AGCGCT 1 cut(s) 1369
AflII CTTAAG 1 cut(s) 2059
AflIII ACRYGT 3 cut(s) 465, 678, 882
AgeI ACCGGT 3 cut(s) 536, 1337, 1915
AgsI TTSAA 7 cut(s) 15, 196, 374, 532, 722, 997, 1414
AhdI GACNNNNNGTC 1 cut(s) 1569
AjiI CACGTC 1 cut(s) 900
AjnI CCWGG 3 cut(s) 494, 1282, 1304
AleI CACNNNNGTG 1 cut(s) 1918
Alw21I GWGCWC 2 cut(s) 663, 1167
Alw26I GTCTC 4 cut(s) 155, 881, 1535, 1552
AlwI GGATC 5 cut(s) 240, 1484, 1625, 1669, 1702
AlwNI CAGNNNCTG 1 cut(s) 1561
Ama87I CYCGRG 2 cut(s) 690, 1645
Aor51HI AGCGCT 1 cut(s) 1369
ApaI GGGCCC 1 cut(s) 830
ApeKI GCWGC 3 cut(s) 509, 1977, 1980
ApoI RAATTY 2 cut(s) 1352, 1894
ArsI GACNNNNNNTTYG 2 cut(s) 1879, 1911
AsiGI ACCGGT 3 cut(s) 536, 1337, 1915
Asp718I GGTACC 1 cut(s) 1074
AspLEI GCGC 3 cut(s) 705, 1021, 1370
AsuII TTCGAA 1 cut(s) 1262
AvaI CYCGRG 2 cut(s) 690, 1645
AvaII GGWCC 8 cut(s) 363, 382, 394, 1309, 1346, 1571, 1633, 1924
BaeGI GKGCMC 2 cut(s) 495, 830
BalI TGGCCA 2 cut(s) 180, 932
BanI GGYRCC 2 cut(s) 1074, 1340
BanII GRGCYC 4 cut(s) 663, 830, 1554, 1809
BarI GAAGNNNNNNTAC 2 cut(s) 1171, 1203
BauI CACGAG 2 cut(s) 934, 949
BbrPI CACGTG 1 cut(s) 964
BbsI GAAGAC 5 cut(s) 82, 486, 789, 946, 1474
Bbv12I GWGCWC 2 cut(s) 663, 1167
BbvCI CCTCAGC 1 cut(s) 1371
BbvI GCAGC 3 cut(s) 496, 1964, 1992
BccI CCATC 5 cut(s) 170, 1397, 1751, 1817, 1901
BciT130I CCWGG 3 cut(s) 496, 1284, 1306
BcoDI GTCTC 4 cut(s) 155, 881, 1535, 1552
BfaI CTAG 2 cut(s) 1974, 2016
BfmI CTRYAG 1 cut(s) 1978
BfoI RGCGCY 1 cut(s) 1371
BfrI CTTAAG 1 cut(s) 2059
BfuAI ACCTGC 1 cut(s) 1193
BisI GCNGC 9 cut(s) 63, 510, 615, 618, 730, 869, 1022, 1978, 1981
BlpI GCTNAGC 1 cut(s) 1803
BlsI GCNGC 9 cut(s) 64, 511, 616, 619, 731, 870, 1023, 1979, 1982
Bme18I GGWCC 8 cut(s) 363, 382, 394, 1309, 1346, 1571, 1633, 1924
BmeRI GACNNNNNGTC 1 cut(s) 1569
BmeT110I CYCGRG 2 cut(s) 690, 1645
BmgBI CACGTC 1 cut(s) 900
BmrI ACTGGG 1 cut(s) 432
BmsI GCATC 3 cut(s) 93, 360, 1831
BmuI ACTGGG 1 cut(s) 432
BpiI GAAGAC 5 cut(s) 82, 486, 789, 946, 1474
BplI GAGNNNNNCTC 4 cut(s) 541, 573, 1796, 1828
BpmI CTGGAG 2 cut(s) 257, 1538
Bpu10I CCTNAGC 1 cut(s) 1371
Bpu1102I GCTNAGC 1 cut(s) 1803
Bpu14I TTCGAA 1 cut(s) 1262
BsaAI YACGTR 5 cut(s) 466, 679, 964, 1243, 1672
BsaHI GRCGYC 6 cut(s) 324, 567, 620, 651, 1326, 1527
BsaI GGTCTC 2 cut(s) 155, 881
BsaWI WCCGGW 6 cut(s) 536, 1337, 1348, 1360, 1485, 1915
BsaXI ACNNNNNCTCC 6 cut(s) 194, 224, 467, 497, 1536, 1566
Bse118I RCCGGY 4 cut(s) 536, 1266, 1337, 1915
Bse1I ACTGG 5 cut(s) 181, 438, 787, 1601, 1619
BseBI CCWGG 3 cut(s) 496, 1284, 1306
BseGI GGATG 3 cut(s) 1762, 1912, 1954
BseMII CTCAG 4 cut(s) 676, 1180, 1362, 1794
BseNI ACTGG 5 cut(s) 181, 438, 787, 1601, 1619
BseRI GAGGAG 3 cut(s) 202, 671, 792
BseSI GKGCMC 2 cut(s) 495, 830
BseXI GCAGC 3 cut(s) 496, 1964, 1992
BseYI CCCAGC 2 cut(s) 403, 1928
BsgI GTGCAG 1 cut(s) 1105
Bsh1285I CGRYCG 2 cut(s) 144, 1490
BshNI GGYRCC 2 cut(s) 1074, 1340
BshTI ACCGGT 3 cut(s) 536, 1337, 1915
BsiEI CGRYCG 2 cut(s) 144, 1490
BsiHKAI GWGCWC 2 cut(s) 663, 1167
BsiHKCI CYCGRG 2 cut(s) 690, 1645
BsiWI CGTACG 1 cut(s) 1836
BslFI GGGAC 6 cut(s) 380, 656, 707, 712, 1322, 1910
BsmAI GTCTC 4 cut(s) 155, 881, 1535, 1552
BsmFI GGGAC 6 cut(s) 380, 656, 707, 712, 1322, 1910
Bso31I GGTCTC 2 cut(s) 155, 881
BsoBI CYCGRG 2 cut(s) 690, 1645
Bsp119I TTCGAA 1 cut(s) 1262
Bsp120I GGGCCC 1 cut(s) 826
Bsp1286I GDGCHC 6 cut(s) 495, 663, 830, 1167, 1554, 1809
Bsp1407I TGTACA 1 cut(s) 1515
Bsp143I GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
Bsp1720I GCTNAGC 1 cut(s) 1803
Bsp19I CCATGG 2 cut(s) 1574, 2020
Bsp68I TCGCGA 1 cut(s) 1223
BspCNI CTCAG 4 cut(s) 675, 1179, 1363, 1795
BspMAI CTGCAG 1 cut(s) 1982
BspMI ACCTGC 1 cut(s) 1193
BspPI GGATC 5 cut(s) 240, 1484, 1625, 1669, 1702
BspQI GCTCTTC 1 cut(s) 1757
BspT104I TTCGAA 1 cut(s) 1262
BspT107I GGYRCC 2 cut(s) 1074, 1340
BspTI CTTAAG 1 cut(s) 2059
BspTNI GGTCTC 2 cut(s) 155, 881
BsrFI RCCGGY 4 cut(s) 536, 1266, 1337, 1915
BsrGI TGTACA 1 cut(s) 1515
BsrI ACTGG 5 cut(s) 181, 438, 787, 1601, 1619
BssAI RCCGGY 4 cut(s) 536, 1266, 1337, 1915
BssMI GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
BssNI GRCGYC 6 cut(s) 324, 567, 620, 651, 1326, 1527
BssSI CACGAG 2 cut(s) 934, 949
BssT1I CCWWGG 3 cut(s) 1574, 2020, 2051
Bst2BI CACGAG 2 cut(s) 934, 949
Bst2UI CCWGG 3 cut(s) 496, 1284, 1306
Bst4CI ACNGT 5 cut(s) 1178, 1211, 1259, 1841, 1855
Bst6I CTCTTC 2 cut(s) 769, 1757
BstACI GRCGYC 6 cut(s) 324, 567, 620, 651, 1326, 1527
BstAFI CTTAAG 1 cut(s) 2059
BstAUI TGTACA 1 cut(s) 1515
BstBAI YACGTR 5 cut(s) 466, 679, 964, 1243, 1672
BstBI TTCGAA 1 cut(s) 1262
BstC8I GCNNGC 3 cut(s) 491, 734, 2066
BstDEI CTNAG 5 cut(s) 47, 662, 1166, 1371, 1803
BstDSI CCRYGG 5 cut(s) 585, 927, 1574, 1742, 2020
BstEII GGTNACC 2 cut(s) 146, 1205
BstF5I GGATG 3 cut(s) 1762, 1912, 1954
BstH2I RGCGCY 1 cut(s) 1371
BstHHI GCGC 3 cut(s) 705, 1021, 1370
BstKTI GATC 6 cut(s) 144, 248, 1479, 1620, 1677, 1710
BstMAI GTCTC 4 cut(s) 155, 881, 1535, 1552
BstMBI GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
BstMCI CGRYCG 2 cut(s) 144, 1490
BstMWI GCNNNNNNNGC 5 cut(s) 37, 81, 865, 1009, 1018
BstNI CCWGG 3 cut(s) 496, 1284, 1306
BstPI GGTNACC 2 cut(s) 146, 1205
BstSFI CTRYAG 1 cut(s) 1978
BstSLI GKGCMC 2 cut(s) 495, 830
BstV1I GCAGC 3 cut(s) 496, 1964, 1992
BstV2I GAAGAC 5 cut(s) 82, 486, 789, 946, 1474
BstXI CCANNNNNNTGG 1 cut(s) 1685
BtgI CCRYGG 5 cut(s) 585, 927, 1574, 1742, 2020
BtgZI GCGATG 1 cut(s) 907
BtrI CACGTC 1 cut(s) 900
BtsCI GGATG 3 cut(s) 1762, 1912, 1954
BtsI GCAGTG 1 cut(s) 1996
BtsIMutI CAGTG 3 cut(s) 794, 852, 1996
BtuMI TCGCGA 1 cut(s) 1223
BveI ACCTGC 1 cut(s) 1193
Cac8I GCNNGC 3 cut(s) 491, 734, 2066
CaiI CAGNNNCTG 1 cut(s) 1561
CfoI GCGC 3 cut(s) 705, 1021, 1370
Cfr10I RCCGGY 4 cut(s) 536, 1266, 1337, 1915
Cfr42I CCGCGG 1 cut(s) 588
Cfr9I CCCGGG 1 cut(s) 1645
CpoI CGGWCCG 2 cut(s) 1346, 1633
CseI GACGC 7 cut(s) 332, 556, 609, 709, 1315, 1535, 1617
Csp6I GTAC 8 cut(s) 463, 666, 1026, 1075, 1179, 1516, 1669, 1837
CspAI ACCGGT 3 cut(s) 536, 1337, 1915
CspI CGGWCCG 2 cut(s) 1346, 1633
CviAII CATG 3 cut(s) 71, 1575, 2021
CviQI GTAC 8 cut(s) 463, 666, 1026, 1075, 1179, 1516, 1669, 1837
DdeI CTNAG 5 cut(s) 47, 662, 1166, 1371, 1803
DpnI GATC 6 cut(s) 143, 247, 1478, 1619, 1676, 1709
DpnII GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
DraIII CACNNNGTG 1 cut(s) 1590
DrdI GACNNNNNNGTC 1 cut(s) 650
DriI GACNNNNNGTC 1 cut(s) 1569
DseDI GACNNNNNNGTC 1 cut(s) 650
EaeI YGGCCR 4 cut(s) 178, 199, 734, 930
Eam1104I CTCTTC 2 cut(s) 769, 1757
Eam1105I GACNNNNNGTC 1 cut(s) 1569
EarI CTCTTC 2 cut(s) 769, 1757
EciI GGCGGA 2 cut(s) 80, 355
Ecl136II GAGCTC 1 cut(s) 661
Eco130I CCWWGG 3 cut(s) 1574, 2020, 2051
Eco147I AGGCCT 1 cut(s) 1972
Eco24I GRGCYC 4 cut(s) 663, 830, 1554, 1809
Eco31I GGTCTC 2 cut(s) 155, 881
Eco32I GATATC 1 cut(s) 1381
Eco47I GGWCC 8 cut(s) 363, 382, 394, 1309, 1346, 1571, 1633, 1924
Eco47III AGCGCT 1 cut(s) 1369
Eco53kI GAGCTC 1 cut(s) 661
Eco57I CTGAAG 2 cut(s) 562, 1112
Eco72I CACGTG 1 cut(s) 964
Eco88I CYCGRG 2 cut(s) 690, 1645
Eco91I GGTNACC 2 cut(s) 146, 1205
EcoICRI GAGCTC 1 cut(s) 661
EcoO109I RGGNCCY 4 cut(s) 394, 826, 1309, 1924
EcoO65I GGTNACC 2 cut(s) 146, 1205
EcoRI GAATTC 1 cut(s) 1894
EcoRII CCWGG 3 cut(s) 494, 1282, 1304
EcoRV GATATC 1 cut(s) 1381
EcoT14I CCWWGG 3 cut(s) 1574, 2020, 2051
EcoT38I GRGCYC 4 cut(s) 663, 830, 1554, 1809
ErhI CCWWGG 3 cut(s) 1574, 2020, 2051
FaeI CATG 3 cut(s) 74, 1578, 2024
FaqI GGGAC 6 cut(s) 380, 656, 707, 712, 1322, 1910
FatI CATG 3 cut(s) 70, 1574, 2020
FauI CCCGC 6 cut(s) 592, 901, 1207, 1646, 1709, 1827
FblI GTMKAC 1 cut(s) 1278
Fnu4HI GCNGC 9 cut(s) 63, 510, 615, 618, 730, 869, 1022, 1978, 1981
FokI GGATG 3 cut(s) 1769, 1919, 1961
FriOI GRGCYC 4 cut(s) 663, 830, 1554, 1809
Fsp4HI GCNGC 9 cut(s) 63, 510, 615, 618, 730, 869, 1022, 1978, 1981
FspBI CTAG 2 cut(s) 1974, 2016
GlaI GCGC 3 cut(s) 704, 1020, 1369
GluI GCNGC 9 cut(s) 63, 510, 615, 618, 730, 869, 1022, 1978, 1981
GsaI CCCAGC 2 cut(s) 407, 1932
GsuI CTGGAG 2 cut(s) 257, 1538
HaeII RGCGCY 1 cut(s) 1371
HgaI GACGC 7 cut(s) 332, 556, 609, 709, 1315, 1535, 1617
HhaI GCGC 3 cut(s) 705, 1021, 1370
Hin1I GRCGYC 6 cut(s) 324, 567, 620, 651, 1326, 1527
Hin1II CATG 3 cut(s) 74, 1578, 2024
Hin6I GCGC 3 cut(s) 703, 1019, 1368
HinP1I GCGC 3 cut(s) 703, 1019, 1368
HincII GTYRAC 6 cut(s) 190, 748, 756, 1399, 1422, 1887
HindII GTYRAC 6 cut(s) 190, 748, 756, 1399, 1422, 1887
HindIII AAGCTT 2 cut(s) 1118, 1290
Hpy188I TCNGA 9 cut(s) 245, 1131, 1152, 1169, 1633, 1783, 1873, 1948, 2028
Hpy188III TCNNGA 9 cut(s) 139, 274, 355, 685, 692, 1222, 1297, 1414, 1555
HpyAV CCTTC 7 cut(s) 87, 979, 1197, 1228, 1456, 1461, 1529
HpyCH4III ACNGT 5 cut(s) 1178, 1211, 1259, 1841, 1855
HpyCH4V TGCA 5 cut(s) 1086, 1358, 1980, 1996, 2081
HpyF10VI GCNNNNNNNGC 5 cut(s) 37, 81, 865, 1009, 1018
HpyF3I CTNAG 5 cut(s) 47, 662, 1166, 1371, 1803
Hsp92I GRCGYC 6 cut(s) 324, 567, 620, 651, 1326, 1527
Hsp92II CATG 3 cut(s) 74, 1578, 2024
HspAI GCGC 3 cut(s) 703, 1019, 1368
KflI GGGWCCC 2 cut(s) 1309, 1924
KpnI GGTACC 1 cut(s) 1078
KspI CCGCGG 1 cut(s) 588
Kzo9I GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
LguI GCTCTTC 1 cut(s) 1757
LmnI GCTCC 7 cut(s) 36, 658, 856, 967, 1000, 1557, 1656
Lsp1109I GCAGC 3 cut(s) 496, 1964, 1992
LweI GCATC 3 cut(s) 93, 360, 1831
MaeI CTAG 2 cut(s) 1974, 2016
MaeIII GTNAC 9 cut(s) 146, 286, 862, 900, 959, 1205, 1502, 1592, 1876
MalI GATC 6 cut(s) 143, 247, 1478, 1619, 1676, 1709
MboI GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
MhlI GDGCHC 6 cut(s) 495, 663, 830, 1167, 1554, 1809
MlsI TGGCCA 2 cut(s) 180, 932
MluCI AATT 6 cut(s) 10, 15, 1146, 1352, 1859, 1894
MluI ACGCGT 1 cut(s) 882
MluNI TGGCCA 2 cut(s) 180, 932
MlyI GAGTC 8 cut(s) 476, 550, 682, 717, 761, 851, 1000, 1072
MmeI TCCRAC 3 cut(s) 333, 1611, 1926
Mox20I TGGCCA 2 cut(s) 180, 932
MscI TGGCCA 2 cut(s) 180, 932
MseI TTAA 1 cut(s) 2060
MslI CAYNNNNRTG 4 cut(s) 677, 926, 1683, 1918
Msp20I TGGCCA 2 cut(s) 180, 932
MspA1I CMGCKG 3 cut(s) 509, 587, 1802
MspCI CTTAAG 1 cut(s) 2059
MvaI CCWGG 3 cut(s) 496, 1284, 1306
MwoI GCNNNNNNNGC 5 cut(s) 37, 81, 865, 1009, 1018
NcoI CCATGG 2 cut(s) 1574, 2020
NdeII GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
NlaIII CATG 3 cut(s) 74, 1578, 2024
NmeAIII GCCGAG 4 cut(s) 731, 762, 988, 1555
NmuCI GTSAC 6 cut(s) 146, 286, 900, 959, 1205, 1502
NruI TCGCGA 1 cut(s) 1223
NspV TTCGAA 1 cut(s) 1262
OliI CACNNNNGTG 1 cut(s) 1918
PaqCI CACCTGC 1 cut(s) 1193
PceI AGGCCT 1 cut(s) 1972
PciSI GCTCTTC 1 cut(s) 1757
PcsI WCGNNNNNNNCGW 5 cut(s) 617, 629, 651, 1187, 1668
PfeI GAWTC 5 cut(s) 168, 240, 338, 1058, 1170
Pfl23II CGTACG 1 cut(s) 1836
PflMI CCANNNNNTGG 1 cut(s) 40
PinAI ACCGGT 3 cut(s) 536, 1337, 1915
PkrI GCNGC 9 cut(s) 64, 511, 616, 619, 731, 870, 1023, 1979, 1982
Ple19I CGATCG 1 cut(s) 144
PleI GAGTC 8 cut(s) 476, 550, 682, 716, 760, 850, 1000, 1071
PmaCI CACGTG 1 cut(s) 964
PmlI CACGTG 1 cut(s) 964
PpsI GAGTC 8 cut(s) 476, 550, 682, 716, 760, 850, 1000, 1071
Ppu21I YACGTR 5 cut(s) 466, 679, 964, 1243, 1672
PpuMI RGGWCCY 3 cut(s) 394, 1309, 1924
Psp124BI GAGCTC 1 cut(s) 663
Psp5II RGGWCCY 3 cut(s) 394, 1309, 1924
Psp6I CCWGG 3 cut(s) 494, 1282, 1304
PspCI CACGTG 1 cut(s) 964
PspEI GGTNACC 2 cut(s) 146, 1205
PspFI CCCAGC 2 cut(s) 403, 1928
PspGI CCWGG 3 cut(s) 494, 1282, 1304
PspLI CGTACG 1 cut(s) 1836
PspOMI GGGCCC 1 cut(s) 826
PspPPI RGGWCCY 3 cut(s) 394, 1309, 1924
PstI CTGCAG 1 cut(s) 1982
PstNI CAGNNNCTG 1 cut(s) 1561
PvuI CGATCG 1 cut(s) 144
PvuII CAGCTG 2 cut(s) 509, 1802
RruI TCGCGA 1 cut(s) 1223
RsaI GTAC 8 cut(s) 464, 667, 1027, 1076, 1180, 1517, 1670, 1838
RsaNI GTAC 8 cut(s) 463, 666, 1026, 1075, 1179, 1516, 1669, 1837
RseI CAYNNNNRTG 4 cut(s) 677, 926, 1683, 1918
Rsr2I CGGWCCG 2 cut(s) 1346, 1633
RsrII CGGWCCG 2 cut(s) 1346, 1633
SacI GAGCTC 1 cut(s) 663
SacII CCGCGG 1 cut(s) 588
SapI GCTCTTC 1 cut(s) 1757
SaqAI TTAA 1 cut(s) 2060
SatI GCNGC 9 cut(s) 63, 510, 615, 618, 730, 869, 1022, 1978, 1981
Sau3AI GATC 6 cut(s) 141, 245, 1476, 1617, 1674, 1707
SchI GAGTC 8 cut(s) 476, 550, 682, 717, 761, 851, 1000, 1072
SduI GDGCHC 6 cut(s) 495, 663, 830, 1167, 1554, 1809
SfaNI GCATC 3 cut(s) 93, 360, 1831
SfcI CTRYAG 1 cut(s) 1978
Sfr303I CCGCGG 1 cut(s) 588
SfuI TTCGAA 1 cut(s) 1262
SgrAI CRCCGGYG 2 cut(s) 1337, 1915
SgrBI CCGCGG 1 cut(s) 588
SinI GGWCC 8 cut(s) 363, 382, 394, 1309, 1346, 1571, 1633, 1924
SmaI CCCGGG 1 cut(s) 1647
SmiMI CAYNNNNRTG 4 cut(s) 677, 926, 1683, 1918
SmlI CTYRAG 1 cut(s) 2059
SmoI CTYRAG 1 cut(s) 2059
Sse9I AATT 6 cut(s) 10, 15, 1146, 1352, 1859, 1894
SseBI AGGCCT 1 cut(s) 1972
SspMI CTAG 2 cut(s) 1974, 2016
SstI GAGCTC 1 cut(s) 663
StuI AGGCCT 1 cut(s) 1972
StyI CCWWGG 3 cut(s) 1574, 2020, 2051
TaaI ACNGT 5 cut(s) 1178, 1211, 1259, 1841, 1855
TaqII GACCGA 1 cut(s) 134
TasI AATT 6 cut(s) 10, 15, 1146, 1352, 1859, 1894
TatI WGTACW 2 cut(s) 665, 1515
TauI GCSGC 6 cut(s) 65, 617, 620, 732, 871, 1024
TfiI GAWTC 5 cut(s) 168, 240, 338, 1058, 1170
Tru1I TTAA 1 cut(s) 2060
Tru9I TTAA 1 cut(s) 2060
TscAI CASTG 3 cut(s) 794, 852, 2003
TseFI GTSAC 6 cut(s) 146, 286, 900, 959, 1205, 1502
TseI GCWGC 3 cut(s) 509, 1977, 1980
Tsp45I GTSAC 6 cut(s) 146, 286, 900, 959, 1205, 1502
TspDTI ATGAA 5 cut(s) 17, 440, 910, 1036, 1924
TspGWI ACGGA 8 cut(s) 175, 333, 947, 1150, 1482, 1580, 1595, 1744
TspMI CCCGGG 1 cut(s) 1645
TspRI CASTG 3 cut(s) 794, 852, 2003
Van91I CCANNNNNTGG 1 cut(s) 40
Vha464I CTTAAG 1 cut(s) 2059
VpaK11BI GGWCC 8 cut(s) 363, 382, 394, 1309, 1346, 1571, 1633, 1924
XapI RAATTY 2 cut(s) 1352, 1894
XcmI CCANNNNNNNNNTGG 1 cut(s) 2027
XmaI CCCGGG 1 cut(s) 1645
XmiI GTMKAC 1 cut(s) 1278
XspI CTAG 2 cut(s) 1974, 2016
ZraI GACGTC 1 cut(s) 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.