Rh6AG373600

WD40-like Beta Propeller Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0016112
Physical Location & Seq
Reverse (-)
57243416 .. 57247117
3702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG373600.1

Sequence Viewer

Length: 2106 bp
ATGAAACCCAATTCAATTCTCCATTTGTTCCATTTGCTGGTGCTTAGTTTCTGTTTAGCGGCGGAACATGGCCCTTCCAGCATCGTCTTCACCACCAACGGCAGATTAGACTACTATTTCGACATCTTCACCCTCCCGATCGGTCACCCAACCACCGAGACCCGAATCACAGATGGCCAGTCCGTCAACTTCAACGGCCACTTCCCCTCCTCCACTTTCTTTCCCAACCAAACCCGAATCCGGTTCCCCACCCGACCCGACCCCTCTCTCCAGATCATCTACGTCACCGAGAGAAACGGCTTTTCCAACATCTACTACGACGCCGTTTACTTCGATTCTCCGTCGAGCATCAGGAAAAGGTCCGCCCTTGAAGTCGTGGACCGGGTTCAGGTCCCTCTGCTGGGCTTGGACGGGGTTTCGATGAAAGACAAGCCCAGTTTGACAGGGGAGTATTTGGTATACGTGTCCACCCACGAAGACTCCGGCGTGCCCAGGACGAGTTCAGCTGCGGTTTACTCGACCGAGTTGAACTCCGGTTTGACCCGGAGGCTGACTCCTTACGGCGTCGCGGACTTCAGCCCCGCGGTGTCGCCGTCTGGGGTTTGGACGGCGGCGGCGTCGTATGGGCCGAAAGGTTGGGACGGCGACGTCGAGGAGCTCAGTACAGACATCTACGTGTTCTTGACTCGGGACGGGACTCGCCGAGTCAGGGTGGTTGAGCACGGCGGCTGGCCGAGTTGGGTTGATGAGTCAACGATTTACTTTCACAGAAGAGGAGAAGACCAGTGGTGGAGTATTTATCGGGCGATTTTACCGAGAGGGGGGCCGATTTCTACCGAGTCAGTGGTGGTGGAGCGAGTTACGCCGCCGGGTCTCCACGCGTTCACACCCGCCACGTCACCGGGGAACCACGACTTCATCGCCGTGGCCACGAGAAGACCCACCACGAGCTTCCGCCACGTGGAGCTGTTCGACTTGGTGAAGGGCGAGTTCAAGGAGCTGACTCGGCTCGTCGCGCCGCGTACCCACCACTACAACCCGTTCATCTCCCCCGATTCGAGTCGGGTCGGGTACCACAAGTGCAGAGGCAACGCGAACGGGAAGAAAAGCCCGAAGCTTTTTCTTCAGAATATCCACAGCTCAATTCCGAACCTGTCCGTGCTCAGAATCGACGGTACGTTCCCTTCGTTTTCACCCGCAGGTGACCGTATCGCCTTCGCGAACTTACCGGGTATCTACGTGGTGAACCGCGACGGTTCGAACCGGCGACAGGTCTACCCTGGAAAAGCTTTCTCGACCACCTGGGACCCGGTTCGCAAGGGCGTCATATACACCGGTGCCGGACCGGAATTTGCACCGGAGAGCGCTGAGGTTGATATCATCTCCATCGACGTTGACCAAATCGCTTTCAAGAAGTTGACCACAAACGGGAAGAACAACGCCTTCCCTTCACCCTCGCCCGACGGAAAACGGATCGTCTTCCGGTCGGGTCTGTCGGGTCACAAAAACCTGTACATAATGGACGCCGAGGAAGGTGAGACACTTGGGCTCCAGAGACTGACGGAGGGTCCATGGACGGACACGATGTGTAACTGGTCGCCGGACGGCGACTGGATCGCGTTCGCGTCGGACCGGGAGAACCCGGGTAGCGGGAGCTTCGAGTTGTACGTGATCCACCCGAATGGAACCGGGTTGAGGAAAGTGATCCAAAGCGGGTCGGGTGGACGGACTAACCACCCGTGGTTCAGCCCGGATGGGAAGAGCTTGGTTTTCACTTCGGATTATGGGGGCATATCAGCTGAGCCCATCTCAAACCCGCATCATTACCAGCCGTACGGTGAGATTTTTACTGTGAAATTGGACGGCTCTGATGTTACGAGGTTGACACAGAATTCGTTTGAGGATGGAACACCGGTGTGGGTCCCCAGCTTCATCAGGCCGTCGGATGTAGAGTGGCCTATTGATAGGCCTAGCTGCAGCTTTGATGATTTGCACTGCCTCAGTGATTTTCCTAGCCATGGTCAGAATGGTGGTGTTGGGGCTGTTCCTTGGCTCTTAAGCAAGCCTCAATGTGGGTTAAAATACAAACGTCTATCTGGCTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PD40

Protein Analysis

701

Amino Acids

77.56

Weight (kDa)

6.52

Isoelectric Point (pI)

40.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tricorn_N PF26549 458 - 641 2.7e-20 Tricorn protease N-terminal beta propeller domain
Tricorn_2nd PF26550 459 - 594 2.9e-08 Tricorn protease second beta propeller domain
PD40 PF07676 471 - 505 5.9e-06 WD40-like Beta Propeller Repeat
PD40 PF07676 518 - 557 9.7e-08 WD40-like Beta Propeller Repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016112)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21680
fragaria_vesca FvH4_2g27620
malus_domestica MD15G1344100.v1.1
prunus_persica Prupe.1G491500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0296441
rosa_laevigata RLG00000011693
rosa_multiflora Rmu_sc0028875.1_g000001
rosa_roxburghii Rroxscaffold_7G00171530 Rroxscaffold_7G00178600
rosa_rugosa Rorug06G0262400
rosa_samantha Rh6AG373600 Rh6BG382400 Rh6CG387200 Rh6DG374900
rosa_wichuraiana Rw6G032600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1190
AasI GACNNNNNNGTC 1 cut(s) 647
AatII GACGTC 1 cut(s) 651
Acc36I ACCTGC 1 cut(s) 1190
Acc65I GGTACC 1 cut(s) 1071
AccB1I GGYRCC 2 cut(s) 1071, 1337
AccB7I CCANNNNNTGG 1 cut(s) 37
AccI GTMKAC 2 cut(s) 459, 1275
AclWI GGATC 4 cut(s) 1481, 1622, 1666, 1699
AcoI YGGCCR 4 cut(s) 175, 196, 731, 927
AcsI RAATTY 2 cut(s) 1349, 1891
AcuI CTGAAG 2 cut(s) 559, 1109
AcvI CACGTG 1 cut(s) 961
AcyI GRCGYC 6 cut(s) 321, 564, 617, 648, 1323, 1524
AdeI CACNNNGTG 1 cut(s) 1587
AfaI GTAC 7 cut(s) 664, 1024, 1073, 1177, 1514, 1667, 1835
AfeI AGCGCT 1 cut(s) 1366
AflII CTTAAG 1 cut(s) 2056
AflIII ACRYGT 3 cut(s) 462, 675, 879
AgeI ACCGGT 2 cut(s) 1334, 1912
AgsI TTSAA 6 cut(s) 15, 193, 371, 529, 994, 1411
AhdI GACNNNNNGTC 1 cut(s) 1566
AjiI CACGTC 1 cut(s) 897
AjnI CCWGG 3 cut(s) 491, 1279, 1301
AleI CACNNNNGTG 1 cut(s) 1915
Alw21I GWGCWC 3 cut(s) 660, 723, 1164
Alw26I GTCTC 4 cut(s) 152, 878, 1532, 1549
AlwI GGATC 4 cut(s) 1481, 1622, 1666, 1699
AlwNI CAGNNNCTG 1 cut(s) 1558
Ama87I CYCGRG 2 cut(s) 687, 1642
Aor51HI AGCGCT 1 cut(s) 1366
ApeKI GCWGC 3 cut(s) 506, 1974, 1977
ApoI RAATTY 2 cut(s) 1349, 1891
ArsI GACNNNNNNTTYG 4 cut(s) 101, 133, 1876, 1908
AsiGI ACCGGT 2 cut(s) 1334, 1912
Asp718I GGTACC 1 cut(s) 1071
AspLEI GCGC 2 cut(s) 1018, 1367
AsuII TTCGAA 1 cut(s) 1259
AvaI CYCGRG 2 cut(s) 687, 1642
AvaII GGWCC 8 cut(s) 360, 379, 391, 1306, 1343, 1568, 1630, 1921
BaeGI GKGCMC 1 cut(s) 492
BalI TGGCCA 2 cut(s) 177, 929
BanI GGYRCC 2 cut(s) 1071, 1337
BanII GRGCYC 3 cut(s) 660, 1551, 1806
BarI GAAGNNNNNNTAC 2 cut(s) 1168, 1200
BauI CACGAG 2 cut(s) 931, 946
BbrPI CACGTG 1 cut(s) 961
BbsI GAAGAC 5 cut(s) 79, 483, 786, 943, 1471
Bbv12I GWGCWC 3 cut(s) 660, 723, 1164
BbvCI CCTCAGC 1 cut(s) 1368
BbvI GCAGC 3 cut(s) 493, 1961, 1989
BccI CCATC 5 cut(s) 167, 1394, 1748, 1814, 1898
BciT130I CCWGG 3 cut(s) 493, 1281, 1303
BcoDI GTCTC 4 cut(s) 152, 878, 1532, 1549
BfaI CTAG 2 cut(s) 1971, 2013
BfmI CTRYAG 1 cut(s) 1975
BfoI RGCGCY 1 cut(s) 1368
BfrI CTTAAG 1 cut(s) 2056
BfuAI ACCTGC 1 cut(s) 1190
BisI GCNGC 9 cut(s) 60, 507, 612, 615, 727, 866, 1019, 1975, 1978
BlpI GCTNAGC 1 cut(s) 1800
BlsI GCNGC 9 cut(s) 61, 508, 613, 616, 728, 867, 1020, 1976, 1979
Bme18I GGWCC 8 cut(s) 360, 379, 391, 1306, 1343, 1568, 1630, 1921
BmeRI GACNNNNNGTC 1 cut(s) 1566
BmeT110I CYCGRG 2 cut(s) 687, 1642
BmgBI CACGTC 1 cut(s) 897
BmrI ACTGGG 1 cut(s) 429
BmsI GCATC 3 cut(s) 90, 357, 1828
BmuI ACTGGG 1 cut(s) 429
BpiI GAAGAC 5 cut(s) 79, 483, 786, 943, 1471
BplI GAGNNNNNCTC 6 cut(s) 515, 547, 538, 570, 1793, 1825
BpmI CTGGAG 2 cut(s) 254, 1535
Bpu10I CCTNAGC 1 cut(s) 1368
Bpu1102I GCTNAGC 1 cut(s) 1800
Bpu14I TTCGAA 1 cut(s) 1259
BsaAI YACGTR 5 cut(s) 463, 676, 961, 1240, 1669
BsaHI GRCGYC 6 cut(s) 321, 564, 617, 648, 1323, 1524
BsaI GGTCTC 2 cut(s) 152, 878
BsaWI WCCGGW 7 cut(s) 240, 533, 1334, 1345, 1357, 1482, 1912
BsaXI ACNNNNNCTCC 6 cut(s) 191, 221, 464, 494, 1533, 1563
Bse118I RCCGGY 3 cut(s) 1263, 1334, 1912
Bse1I ACTGG 5 cut(s) 178, 435, 784, 1598, 1616
BseBI CCWGG 3 cut(s) 493, 1281, 1303
BseGI GGATG 3 cut(s) 1759, 1909, 1951
BseMII CTCAG 5 cut(s) 673, 1177, 1359, 1791, 2014
BseNI ACTGG 5 cut(s) 178, 435, 784, 1598, 1616
BseRI GAGGAG 3 cut(s) 199, 668, 789
BseSI GKGCMC 1 cut(s) 492
BseXI GCAGC 3 cut(s) 493, 1961, 1989
BseYI CCCAGC 2 cut(s) 400, 1925
BsgI GTGCAG 1 cut(s) 1102
Bsh1285I CGRYCG 3 cut(s) 141, 522, 1487
BshNI GGYRCC 2 cut(s) 1071, 1337
BshTI ACCGGT 2 cut(s) 1334, 1912
BsiEI CGRYCG 3 cut(s) 141, 522, 1487
BsiHKAI GWGCWC 3 cut(s) 660, 723, 1164
BsiHKCI CYCGRG 2 cut(s) 687, 1642
BsiWI CGTACG 1 cut(s) 1833
BslFI GGGAC 6 cut(s) 377, 653, 704, 709, 1319, 1907
BsmAI GTCTC 4 cut(s) 152, 878, 1532, 1549
BsmFI GGGAC 6 cut(s) 377, 653, 704, 709, 1319, 1907
Bso31I GGTCTC 2 cut(s) 152, 878
BsoBI CYCGRG 2 cut(s) 687, 1642
Bsp119I TTCGAA 1 cut(s) 1259
Bsp1286I GDGCHC 6 cut(s) 492, 660, 723, 1164, 1551, 1806
Bsp1407I TGTACA 1 cut(s) 1512
Bsp143I GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
Bsp1720I GCTNAGC 1 cut(s) 1800
Bsp19I CCATGG 2 cut(s) 1571, 2017
Bsp68I TCGCGA 1 cut(s) 1220
BspCNI CTCAG 5 cut(s) 672, 1176, 1360, 1792, 2013
BspMAI CTGCAG 1 cut(s) 1979
BspMI ACCTGC 1 cut(s) 1190
BspPI GGATC 4 cut(s) 1481, 1622, 1666, 1699
BspQI GCTCTTC 1 cut(s) 1754
BspT104I TTCGAA 1 cut(s) 1259
BspT107I GGYRCC 2 cut(s) 1071, 1337
BspTI CTTAAG 1 cut(s) 2056
BspTNI GGTCTC 2 cut(s) 152, 878
BsrFI RCCGGY 3 cut(s) 1263, 1334, 1912
BsrGI TGTACA 1 cut(s) 1512
BsrI ACTGG 5 cut(s) 178, 435, 784, 1598, 1616
BssAI RCCGGY 3 cut(s) 1263, 1334, 1912
BssMI GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
BssNAI GTATAC 1 cut(s) 460
BssNI GRCGYC 6 cut(s) 321, 564, 617, 648, 1323, 1524
BssSI CACGAG 2 cut(s) 931, 946
BssT1I CCWWGG 3 cut(s) 1571, 2017, 2048
Bst1107I GTATAC 1 cut(s) 460
Bst2BI CACGAG 2 cut(s) 931, 946
Bst2UI CCWGG 3 cut(s) 493, 1281, 1303
Bst4CI ACNGT 5 cut(s) 1175, 1208, 1256, 1838, 1852
Bst6I CTCTTC 2 cut(s) 766, 1754
BstACI GRCGYC 6 cut(s) 321, 564, 617, 648, 1323, 1524
BstAFI CTTAAG 1 cut(s) 2056
BstAUI TGTACA 1 cut(s) 1512
BstBAI YACGTR 5 cut(s) 463, 676, 961, 1240, 1669
BstBI TTCGAA 1 cut(s) 1259
BstC8I GCNNGC 3 cut(s) 488, 731, 2063
BstDEI CTNAG 7 cut(s) 44, 659, 1163, 1368, 1800, 2000, 2103
BstDSI CCRYGG 5 cut(s) 582, 924, 1571, 1739, 2017
BstEII GGTNACC 2 cut(s) 143, 1202
BstF5I GGATG 3 cut(s) 1759, 1909, 1951
BstH2I RGCGCY 1 cut(s) 1368
BstHHI GCGC 2 cut(s) 1018, 1367
BstKTI GATC 6 cut(s) 141, 276, 1476, 1617, 1674, 1707
BstMAI GTCTC 4 cut(s) 152, 878, 1532, 1549
BstMBI GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
BstMCI CGRYCG 3 cut(s) 141, 522, 1487
BstMWI GCNNNNNNNGC 4 cut(s) 78, 862, 1006, 1015
BstNI CCWGG 3 cut(s) 493, 1281, 1303
BstPI GGTNACC 2 cut(s) 143, 1202
BstSFI CTRYAG 1 cut(s) 1975
BstSLI GKGCMC 1 cut(s) 492
BstV1I GCAGC 3 cut(s) 493, 1961, 1989
BstV2I GAAGAC 5 cut(s) 79, 483, 786, 943, 1471
BstXI CCANNNNNNTGG 1 cut(s) 1682
BstZ17I GTATAC 1 cut(s) 460
BtgI CCRYGG 5 cut(s) 582, 924, 1571, 1739, 2017
BtgZI GCGATG 1 cut(s) 904
BtrI CACGTC 1 cut(s) 897
BtsCI GGATG 3 cut(s) 1759, 1909, 1951
BtsI GCAGTG 1 cut(s) 1993
BtsIMutI CAGTG 4 cut(s) 791, 849, 1993, 2008
BtuMI TCGCGA 1 cut(s) 1220
BveI ACCTGC 1 cut(s) 1190
Cac8I GCNNGC 3 cut(s) 488, 731, 2063
CaiI CAGNNNCTG 1 cut(s) 1558
CfoI GCGC 2 cut(s) 1018, 1367
Cfr10I RCCGGY 3 cut(s) 1263, 1334, 1912
Cfr42I CCGCGG 1 cut(s) 585
Cfr9I CCCGGG 1 cut(s) 1642
CpoI CGGWCCG 2 cut(s) 1343, 1630
CseI GACGC 6 cut(s) 329, 553, 606, 1312, 1532, 1614
Csp6I GTAC 7 cut(s) 663, 1023, 1072, 1176, 1513, 1666, 1834
CspAI ACCGGT 2 cut(s) 1334, 1912
CspI CGGWCCG 2 cut(s) 1343, 1630
CviAII CATG 3 cut(s) 68, 1572, 2018
CviQI GTAC 7 cut(s) 663, 1023, 1072, 1176, 1513, 1666, 1834
DdeI CTNAG 7 cut(s) 44, 659, 1163, 1368, 1800, 2000, 2103
DpnI GATC 6 cut(s) 140, 275, 1475, 1616, 1673, 1706
DpnII GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
DraIII CACNNNGTG 1 cut(s) 1587
DrdI GACNNNNNNGTC 1 cut(s) 647
DriI GACNNNNNGTC 1 cut(s) 1566
DseDI GACNNNNNNGTC 1 cut(s) 647
EaeI YGGCCR 4 cut(s) 175, 196, 731, 927
Eam1104I CTCTTC 2 cut(s) 766, 1754
Eam1105I GACNNNNNGTC 1 cut(s) 1566
EarI CTCTTC 2 cut(s) 766, 1754
EciI GGCGGA 3 cut(s) 77, 352, 944
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 3 cut(s) 1571, 2017, 2048
Eco147I AGGCCT 1 cut(s) 1969
Eco24I GRGCYC 3 cut(s) 660, 1551, 1806
Eco31I GGTCTC 2 cut(s) 152, 878
Eco32I GATATC 1 cut(s) 1378
Eco47I GGWCC 8 cut(s) 360, 379, 391, 1306, 1343, 1568, 1630, 1921
Eco47III AGCGCT 1 cut(s) 1366
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 2 cut(s) 559, 1109
Eco72I CACGTG 1 cut(s) 961
Eco88I CYCGRG 2 cut(s) 687, 1642
Eco91I GGTNACC 2 cut(s) 143, 1202
EcoICRI GAGCTC 1 cut(s) 658
EcoO109I RGGNCCY 3 cut(s) 391, 1306, 1921
EcoO65I GGTNACC 2 cut(s) 143, 1202
EcoRI GAATTC 1 cut(s) 1891
EcoRII CCWGG 3 cut(s) 491, 1279, 1301
EcoRV GATATC 1 cut(s) 1378
EcoT14I CCWWGG 3 cut(s) 1571, 2017, 2048
EcoT38I GRGCYC 3 cut(s) 660, 1551, 1806
ErhI CCWWGG 3 cut(s) 1571, 2017, 2048
FaeI CATG 3 cut(s) 71, 1575, 2021
FaqI GGGAC 6 cut(s) 377, 653, 704, 709, 1319, 1907
FatI CATG 3 cut(s) 67, 1571, 2017
FauI CCCGC 6 cut(s) 589, 898, 1204, 1643, 1706, 1824
FblI GTMKAC 2 cut(s) 459, 1275
Fnu4HI GCNGC 9 cut(s) 60, 507, 612, 615, 727, 866, 1019, 1975, 1978
FokI GGATG 3 cut(s) 1766, 1916, 1958
FriOI GRGCYC 3 cut(s) 660, 1551, 1806
Fsp4HI GCNGC 9 cut(s) 60, 507, 612, 615, 727, 866, 1019, 1975, 1978
FspBI CTAG 2 cut(s) 1971, 2013
GlaI GCGC 2 cut(s) 1017, 1366
GluI GCNGC 9 cut(s) 60, 507, 612, 615, 727, 866, 1019, 1975, 1978
GsaI CCCAGC 2 cut(s) 404, 1929
GsuI CTGGAG 2 cut(s) 254, 1535
HaeII RGCGCY 1 cut(s) 1368
HgaI GACGC 6 cut(s) 329, 553, 606, 1312, 1532, 1614
HhaI GCGC 2 cut(s) 1018, 1367
Hin1I GRCGYC 6 cut(s) 321, 564, 617, 648, 1323, 1524
Hin1II CATG 3 cut(s) 71, 1575, 2021
Hin6I GCGC 2 cut(s) 1016, 1365
HinP1I GCGC 2 cut(s) 1016, 1365
HincII GTYRAC 5 cut(s) 187, 753, 1396, 1419, 1884
HindII GTYRAC 5 cut(s) 187, 753, 1396, 1419, 1884
HindIII AAGCTT 2 cut(s) 1115, 1287
Hpy188I TCNGA 8 cut(s) 1128, 1149, 1166, 1630, 1780, 1870, 1945, 2025
Hpy188III TCNNGA 9 cut(s) 136, 271, 352, 682, 689, 1219, 1294, 1411, 1552
HpyAV CCTTC 7 cut(s) 84, 976, 1194, 1225, 1453, 1458, 1526
HpyCH4III ACNGT 5 cut(s) 1175, 1208, 1256, 1838, 1852
HpyCH4V TGCA 4 cut(s) 1083, 1355, 1977, 1993
HpyF10VI GCNNNNNNNGC 4 cut(s) 78, 862, 1006, 1015
HpyF3I CTNAG 7 cut(s) 44, 659, 1163, 1368, 1800, 2000, 2103
Hsp92I GRCGYC 6 cut(s) 321, 564, 617, 648, 1323, 1524
Hsp92II CATG 3 cut(s) 71, 1575, 2021
HspAI GCGC 2 cut(s) 1016, 1365
KflI GGGWCCC 2 cut(s) 1306, 1921
KpnI GGTACC 1 cut(s) 1075
KspI CCGCGG 1 cut(s) 585
Kzo9I GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
LguI GCTCTTC 1 cut(s) 1754
LmnI GCTCC 6 cut(s) 655, 853, 964, 997, 1554, 1653
Lsp1109I GCAGC 3 cut(s) 493, 1961, 1989
LweI GCATC 3 cut(s) 90, 357, 1828
MaeI CTAG 2 cut(s) 1971, 2013
MaeIII GTNAC 8 cut(s) 143, 283, 859, 897, 1202, 1499, 1589, 1873
MalI GATC 6 cut(s) 140, 275, 1475, 1616, 1673, 1706
MboI GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
MhlI GDGCHC 6 cut(s) 492, 660, 723, 1164, 1551, 1806
MlsI TGGCCA 2 cut(s) 177, 929
MluCI AATT 6 cut(s) 10, 15, 1143, 1349, 1856, 1891
MluI ACGCGT 1 cut(s) 879
MluNI TGGCCA 2 cut(s) 177, 929
MlyI GAGTC 9 cut(s) 473, 547, 679, 691, 714, 758, 848, 997, 1069
MmeI TCCRAC 3 cut(s) 330, 1608, 1923
Mox20I TGGCCA 2 cut(s) 177, 929
MscI TGGCCA 2 cut(s) 177, 929
MseI TTAA 2 cut(s) 2057, 2078
MslI CAYNNNNRTG 4 cut(s) 674, 923, 1680, 1915
Msp20I TGGCCA 2 cut(s) 177, 929
MspA1I CMGCKG 3 cut(s) 506, 584, 1799
MspCI CTTAAG 1 cut(s) 2056
MvaI CCWGG 3 cut(s) 493, 1281, 1303
MwoI GCNNNNNNNGC 4 cut(s) 78, 862, 1006, 1015
NcoI CCATGG 2 cut(s) 1571, 2017
NdeII GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
NlaIII CATG 3 cut(s) 71, 1575, 2021
NmeAIII GCCGAG 4 cut(s) 728, 759, 985, 1552
NmuCI GTSAC 5 cut(s) 143, 283, 897, 1202, 1499
NruI TCGCGA 1 cut(s) 1220
NspV TTCGAA 1 cut(s) 1259
OliI CACNNNNGTG 1 cut(s) 1915
PaqCI CACCTGC 1 cut(s) 1190
PceI AGGCCT 1 cut(s) 1969
PciSI GCTCTTC 1 cut(s) 1754
PcsI WCGNNNNNNNCGW 5 cut(s) 614, 626, 648, 1184, 1665
PfeI GAWTC 5 cut(s) 165, 237, 335, 1055, 1167
Pfl23II CGTACG 1 cut(s) 1833
PflMI CCANNNNNTGG 1 cut(s) 37
PinAI ACCGGT 2 cut(s) 1334, 1912
PkrI GCNGC 9 cut(s) 61, 508, 613, 616, 728, 867, 1020, 1976, 1979
Ple19I CGATCG 1 cut(s) 141
PleI GAGTC 9 cut(s) 473, 547, 679, 691, 713, 757, 847, 997, 1068
PmaCI CACGTG 1 cut(s) 961
PmlI CACGTG 1 cut(s) 961
PpsI GAGTC 9 cut(s) 473, 547, 679, 691, 713, 757, 847, 997, 1068
Ppu21I YACGTR 5 cut(s) 463, 676, 961, 1240, 1669
PpuMI RGGWCCY 3 cut(s) 391, 1306, 1921
Psp124BI GAGCTC 1 cut(s) 660
Psp5II RGGWCCY 3 cut(s) 391, 1306, 1921
Psp6I CCWGG 3 cut(s) 491, 1279, 1301
PspCI CACGTG 1 cut(s) 961
PspEI GGTNACC 2 cut(s) 143, 1202
PspFI CCCAGC 2 cut(s) 400, 1925
PspGI CCWGG 3 cut(s) 491, 1279, 1301
PspLI CGTACG 1 cut(s) 1833
PspPPI RGGWCCY 3 cut(s) 391, 1306, 1921
PstI CTGCAG 1 cut(s) 1979
PstNI CAGNNNCTG 1 cut(s) 1558
PvuI CGATCG 1 cut(s) 141
PvuII CAGCTG 2 cut(s) 506, 1799
RruI TCGCGA 1 cut(s) 1220
RsaI GTAC 7 cut(s) 664, 1024, 1073, 1177, 1514, 1667, 1835
RsaNI GTAC 7 cut(s) 663, 1023, 1072, 1176, 1513, 1666, 1834
RseI CAYNNNNRTG 4 cut(s) 674, 923, 1680, 1915
Rsr2I CGGWCCG 2 cut(s) 1343, 1630
RsrII CGGWCCG 2 cut(s) 1343, 1630
SacI GAGCTC 1 cut(s) 660
SacII CCGCGG 1 cut(s) 585
SapI GCTCTTC 1 cut(s) 1754
SaqAI TTAA 2 cut(s) 2057, 2078
SatI GCNGC 9 cut(s) 60, 507, 612, 615, 727, 866, 1019, 1975, 1978
Sau3AI GATC 6 cut(s) 138, 273, 1473, 1614, 1671, 1704
SchI GAGTC 9 cut(s) 473, 547, 679, 691, 714, 758, 848, 997, 1069
SduI GDGCHC 6 cut(s) 492, 660, 723, 1164, 1551, 1806
SfaNI GCATC 3 cut(s) 90, 357, 1828
SfcI CTRYAG 1 cut(s) 1975
Sfr303I CCGCGG 1 cut(s) 585
SfuI TTCGAA 1 cut(s) 1259
SgrAI CRCCGGYG 2 cut(s) 1334, 1912
SgrBI CCGCGG 1 cut(s) 585
SinI GGWCC 8 cut(s) 360, 379, 391, 1306, 1343, 1568, 1630, 1921
SmaI CCCGGG 1 cut(s) 1644
SmiMI CAYNNNNRTG 4 cut(s) 674, 923, 1680, 1915
SmlI CTYRAG 1 cut(s) 2056
SmoI CTYRAG 1 cut(s) 2056
Sse9I AATT 6 cut(s) 10, 15, 1143, 1349, 1856, 1891
SseBI AGGCCT 1 cut(s) 1969
SspMI CTAG 2 cut(s) 1971, 2013
SstI GAGCTC 1 cut(s) 660
StuI AGGCCT 1 cut(s) 1969
StyI CCWWGG 3 cut(s) 1571, 2017, 2048
TaaI ACNGT 5 cut(s) 1175, 1208, 1256, 1838, 1852
TaqII GACCGA 2 cut(s) 131, 536
TasI AATT 6 cut(s) 10, 15, 1143, 1349, 1856, 1891
TatI WGTACW 2 cut(s) 662, 1512
TauI GCSGC 6 cut(s) 62, 614, 617, 729, 868, 1021
TfiI GAWTC 5 cut(s) 165, 237, 335, 1055, 1167
Tru1I TTAA 2 cut(s) 2057, 2078
Tru9I TTAA 2 cut(s) 2057, 2078
TscAI CASTG 4 cut(s) 791, 849, 2000, 2008
TseFI GTSAC 5 cut(s) 143, 283, 897, 1202, 1499
TseI GCWGC 3 cut(s) 506, 1974, 1977
Tsp45I GTSAC 5 cut(s) 143, 283, 897, 1202, 1499
TspDTI ATGAA 5 cut(s) 17, 437, 907, 1033, 1921
TspGWI ACGGA 8 cut(s) 172, 330, 1147, 1479, 1486, 1577, 1592, 1741
TspMI CCCGGG 1 cut(s) 1642
TspRI CASTG 4 cut(s) 791, 849, 2000, 2008
Van91I CCANNNNNTGG 1 cut(s) 37
Vha464I CTTAAG 1 cut(s) 2056
VpaK11BI GGWCC 8 cut(s) 360, 379, 391, 1306, 1343, 1568, 1630, 1921
XapI RAATTY 2 cut(s) 1349, 1891
XcmI CCANNNNNNNNNTGG 1 cut(s) 2024
XmaI CCCGGG 1 cut(s) 1642
XmiI GTMKAC 2 cut(s) 459, 1275
XspI CTAG 2 cut(s) 1971, 2013
ZraI GACGTC 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.