Rmu_sc0037399.1_g000002

Carboxylesterase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0037399.1
OG0016315
Physical Location & Seq
Reverse (-)
8908 .. 10716
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0037399.1_g000002.1.cds

Sequence Viewer

Length: 1188 bp
atgatgccaagcctaagcttgcagctgcagagcttgttcttcaagtaccacctccgccaccaactacagactctaacccaaacccaagaagagacccgcgaccaattcggcaccacttcccgacccgaccacccgtcctttcccgccaacccgactttccaaaacggcgtcgccaccaaggacctccacatcgaccccttatcctctctctccctccgcatcttcctccccgaaacagtcctcgtcaaagactccaccttcggctccgacggcgtcgtctacggcggatactctccctcgatcggaaagcgtcaccgcaagctgccgattatgctgcagttccacggcggcggctttgtcatcgggagcaacggcacggcgtgtaacgatgcgttttgcaggaggatggcgaagctgtgcgacgtgattgtggtggcggtgggttacaggctggcgccggagagtccgtacccggcggcgtttgaggatgggatgttggtgttgaactggctggccaagcaggccaacttggcggcggtgagaaatcgcaatgggaggaagggaaatggttctggtcatccgggtattttcgatagctttgggtcgtccatggttgagccttggttggctgctcatggtgaaccttctaggtgtatactcctcggagtgagctgtggtgctaacatagcagattatgtagctcggaaggctgtggaagcgagcagcctcttggatcctctaaaagtggtggctcaaatcctgatgtaccctttcttcattggaagcgttcccaccaagtccgagattaagttggcaaattcctacttttatgacaaggctacttgtatgatggcatggaagctatttctacccaaggaagagttttatttagaccacccagctggcaaccctctcgttcctgggagagggccgcccttaaagactatgcctcccacacttacaattgttgcagagcatgattggatgcgtgaccggggaattgcttactcagaagcattgcggaaggctaatgtggatgcacctcttcttgagtacaagaatgctgttcatgagtttgctactcttgatgtgctcctccagacaccccaggccctggcttgtgctgatgatatcacaatatgggtcaagaagtatatatcactcagaggtggtgagttttcttactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

395

Amino Acids

43.56

Weight (kDa)

8.36

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016315)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g24810
malus_domestica MD13G1108800.v1.1
prunus_persica Prupe.1G237400_v2.0.a1
pyrus_communis pycom13g09430
rosa_chinensis RchiOBHm_Chr4g0431891
rosa_laevigata RLG00000006878
rosa_multiflora Rmu_sc0004965.1_g000005 Rmu_sc0037399.1_g000002
rosa_roxburghii Rroxscaffold_5G00373320
rosa_rugosa Rorug04G0252800
rosa_samantha Rh4AG310000 Rh4BG317100 Rh4CG332400 Rh4DG312000
rosa_wichuraiana Rw4G026970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 275
AccB1I GGYRCC 2 cut(s) 110, 454
AccB7I CCANNNNNTGG 1 cut(s) 1114
AccI GTMKAC 2 cut(s) 279, 655
AccII CGCG 1 cut(s) 99
AclWI GGATC 2 cut(s) 728, 741
AcoI YGGCCR 1 cut(s) 513
AcsI RAATTY 1 cut(s) 817
AcyI GRCGYC 3 cut(s) 168, 273, 455
AdeI CACNNNGTG 1 cut(s) 381
AfaI GTAC 4 cut(s) 47, 470, 767, 1055
AfiI CCNNNNNNNGG 3 cut(s) 302, 926, 1114
AgsI TTSAA 2 cut(s) 43, 505
AhdI GACNNNNNGTC 1 cut(s) 133
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 3 cut(s) 919, 1107, 1113
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
Alw21I GWGCWC 1 cut(s) 1095
Alw26I GTCTC 1 cut(s) 86
AlwI GGATC 2 cut(s) 728, 741
AlwNI CAGNNNCTG 1 cut(s) 1114
AoxI GGCC 4 cut(s) 513, 522, 929, 1110
ApeKI GCWGC 6 cut(s) 22, 25, 322, 334, 629, 723
ApoI RAATTY 1 cut(s) 817
ArsI GACNNNNNNTTYG 2 cut(s) 242, 274
Asp700I GAANNNNTTC 1 cut(s) 568
AspLEI GCGC 1 cut(s) 457
AspS9I GGNCC 3 cut(s) 181, 929, 1111
AsuC2I CCSGG 3 cut(s) 473, 582, 995
AsuHPI GGTGA 4 cut(s) 305, 550, 650, 1184
AvaII GGWCC 1 cut(s) 181
BalI TGGCCA 1 cut(s) 515
BamHI GGATCC 1 cut(s) 733
BanI GGYRCC 2 cut(s) 110, 454
BarI GAAGNNNNNNTAC 2 cut(s) 758, 790
Bbv12I GWGCWC 1 cut(s) 1095
BbvI GCAGC 6 cut(s) 12, 34, 309, 321, 616, 735
BccI CCATC 3 cut(s) 400, 482, 844
BceAI ACGGC 6 cut(s) 181, 286, 298, 361, 388, 393
BcgI CGANNNNNNTGC 4 cut(s) 316, 350, 895, 929
BciT130I CCWGG 3 cut(s) 921, 1109, 1115
BciVI GTATCC 1 cut(s) 281
BcnI CCSGG 3 cut(s) 473, 582, 995
BcoDI GTCTC 1 cut(s) 86
BfaI CTAG 1 cut(s) 648
BfmI CTRYAG 3 cut(s) 26, 65, 335
BfoI RGCGCY 1 cut(s) 458
BfuI GTATCC 1 cut(s) 281
BglI GCCNNNNNGGC 2 cut(s) 521, 530
Bme1390I CCNGG 6 cut(s) 473, 582, 921, 995, 1109, 1115
Bme18I GGWCC 1 cut(s) 181
BmeRI GACNNNNNGTC 1 cut(s) 133
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 3 cut(s) 181, 929, 1111
BmiI GGNNCC 4 cut(s) 112, 265, 456, 735
BmrFI CCNGG 6 cut(s) 473, 582, 921, 995, 1109, 1115
BmsI GCATC 4 cut(s) 228, 379, 975, 1027
BpmI CTGGAG 1 cut(s) 1082
Bpu10I CCTNAGC 1 cut(s) 14
BpuEI CTTGAG 1 cut(s) 1070
BpuMI CCSGG 3 cut(s) 473, 582, 995
BsaHI GRCGYC 3 cut(s) 168, 273, 455
BsaI GGTCTC 1 cut(s) 86
BsaXI ACNNNNNCTCC 4 cut(s) 452, 482, 934, 964
Bsc4I CCNNNNNNNGG 3 cut(s) 302, 926, 1114
Bse1I ACTGG 1 cut(s) 512
Bse3DI GCAATG 2 cut(s) 556, 1016
BseBI CCWGG 3 cut(s) 921, 1109, 1115
BseGI GGATG 6 cut(s) 411, 493, 498, 577, 990, 1042
BseLI CCNNNNNNNGG 3 cut(s) 302, 926, 1114
BseMI GCAATG 2 cut(s) 556, 1016
BseMII CTCAG 2 cut(s) 1023, 1177
BseNI ACTGG 1 cut(s) 512
BseRI GAGGAG 2 cut(s) 650, 1085
BseXI GCAGC 6 cut(s) 12, 34, 309, 321, 616, 735
BseYI CCCAGC 1 cut(s) 898
Bsh1236I CGCG 1 cut(s) 99
Bsh1285I CGRYCG 1 cut(s) 303
BshFI GGCC 4 cut(s) 515, 524, 931, 1112
BshNI GGYRCC 2 cut(s) 110, 454
BsiEI CGRYCG 1 cut(s) 303
BsiHKAI GWGCWC 1 cut(s) 1095
BsiSI CCGG 4 cut(s) 458, 473, 581, 994
BslI CCNNNNNNNGG 3 cut(s) 302, 926, 1114
BsmAI GTCTC 1 cut(s) 86
BsmI GAATGC 1 cut(s) 1066
BsnI GGCC 4 cut(s) 515, 524, 931, 1112
Bso31I GGTCTC 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 1095
Bsp143I GATC 2 cut(s) 300, 733
Bsp19I CCATGG 1 cut(s) 609
BspANI GGCC 4 cut(s) 515, 524, 931, 1112
BspCNI CTCAG 2 cut(s) 1022, 1176
BspFNI CGCG 1 cut(s) 99
BspHI TCATGA 1 cut(s) 1069
BspLI GGNNCC 4 cut(s) 112, 265, 456, 735
BspMAI CTGCAG 2 cut(s) 30, 339
BspPI GGATC 2 cut(s) 728, 741
BspT107I GGYRCC 2 cut(s) 110, 454
BspTNI GGTCTC 1 cut(s) 86
BsrDI GCAATG 2 cut(s) 556, 1016
BsrI ACTGG 1 cut(s) 512
BssMI GATC 2 cut(s) 300, 733
BssNAI GTATAC 1 cut(s) 656
BssNI GRCGYC 3 cut(s) 168, 273, 455
BssT1I CCWWGG 4 cut(s) 177, 609, 620, 873
Bst1107I GTATAC 1 cut(s) 656
Bst2UI CCWGG 3 cut(s) 921, 1109, 1115
Bst4CI ACNGT 1 cut(s) 238
Bst6I CTCTTC 3 cut(s) 84, 873, 1050
BstACI GRCGYC 3 cut(s) 168, 273, 455
BstC8I GCNNGC 7 cut(s) 20, 320, 453, 513, 522, 721, 904
BstDEI CTNAG 3 cut(s) 14, 1009, 1163
BstDSI CCRYGG 2 cut(s) 343, 609
BstENI CCTNNNNNAGG 1 cut(s) 924
BstF5I GGATG 6 cut(s) 411, 493, 498, 577, 990, 1042
BstFNI CGCG 1 cut(s) 99
BstH2I RGCGCY 1 cut(s) 458
BstHHI GCGC 1 cut(s) 457
BstKTI GATC 2 cut(s) 303, 736
BstMAI GTCTC 1 cut(s) 86
BstMBI GATC 2 cut(s) 300, 733
BstMCI CGRYCG 1 cut(s) 303
BstMWI GCNNNNNNNGC 8 cut(s) 270, 331, 517, 521, 530, 686, 707, 716
BstNI CCWGG 3 cut(s) 921, 1109, 1115
BstSCI CCNGG 6 cut(s) 471, 580, 919, 993, 1107, 1113
BstSFI CTRYAG 3 cut(s) 26, 65, 335
BstUI CGCG 1 cut(s) 99
BstV1I GCAGC 6 cut(s) 12, 34, 309, 321, 616, 735
BstX2I RGATCY 1 cut(s) 733
BstXI CCANNNNNNTGG 1 cut(s) 902
BstYI RGATCY 1 cut(s) 733
BstZ17I GTATAC 1 cut(s) 656
BsuI GTATCC 1 cut(s) 281
BsuRI GGCC 4 cut(s) 515, 524, 931, 1112
BtgI CCRYGG 2 cut(s) 343, 609
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 6 cut(s) 411, 493, 498, 577, 990, 1042
Cac8I GCNNGC 7 cut(s) 20, 320, 453, 513, 522, 721, 904
CaiI CAGNNNCTG 1 cut(s) 1114
CciI TCATGA 1 cut(s) 1069
CfoI GCGC 1 cut(s) 457
Cfr13I GGNCC 3 cut(s) 181, 929, 1111
CseI GACGC 3 cut(s) 157, 262, 299
Csp6I GTAC 4 cut(s) 46, 469, 766, 1054
CviAII CATG 5 cut(s) 610, 635, 855, 977, 1070
CviQI GTAC 4 cut(s) 46, 469, 766, 1054
DdeI CTNAG 3 cut(s) 14, 1009, 1163
DinI GGCGCC 1 cut(s) 456
DpnI GATC 2 cut(s) 302, 735
DpnII GATC 2 cut(s) 300, 733
DraIII CACNNNGTG 1 cut(s) 381
DrdI GACNNNNNNGTC 1 cut(s) 275
DriI GACNNNNNGTC 1 cut(s) 133
DseDI GACNNNNNNGTC 1 cut(s) 275
EaeI YGGCCR 1 cut(s) 513
Eam1104I CTCTTC 3 cut(s) 84, 873, 1050
Eam1105I GACNNNNNGTC 1 cut(s) 133
EarI CTCTTC 3 cut(s) 84, 873, 1050
EciI GGCGGA 2 cut(s) 44, 300
Eco130I CCWWGG 4 cut(s) 177, 609, 620, 873
Eco31I GGTCTC 1 cut(s) 86
Eco32I GATATC 1 cut(s) 1132
Eco47I GGWCC 1 cut(s) 181
EcoNI CCTNNNNNAGG 1 cut(s) 924
EcoO109I RGGNCCY 2 cut(s) 181, 1111
EcoRII CCWGG 3 cut(s) 919, 1107, 1113
EcoRV GATATC 1 cut(s) 1132
EcoT14I CCWWGG 4 cut(s) 177, 609, 620, 873
EgeI GGCGCC 1 cut(s) 456
EheI GGCGCC 1 cut(s) 456
ErhI CCWWGG 4 cut(s) 177, 609, 620, 873
FaeI CATG 5 cut(s) 613, 638, 858, 980, 1073
FatI CATG 5 cut(s) 609, 634, 854, 976, 1069
FauI CCCGC 2 cut(s) 104, 151
FblI GTMKAC 2 cut(s) 279, 655
FokI GGATG 6 cut(s) 418, 500, 505, 564, 997, 1049
FspBI CTAG 1 cut(s) 648
GlaI GCGC 1 cut(s) 456
GsaI CCCAGC 1 cut(s) 902
GsuI CTGGAG 1 cut(s) 1082
HaeII RGCGCY 1 cut(s) 458
HaeIII GGCC 4 cut(s) 515, 524, 931, 1112
HapII CCGG 4 cut(s) 458, 473, 581, 994
HgaI GACGC 3 cut(s) 157, 262, 299
HhaI GCGC 1 cut(s) 457
Hin1I GRCGYC 3 cut(s) 168, 273, 455
Hin1II CATG 5 cut(s) 613, 638, 858, 980, 1073
Hin6I GCGC 1 cut(s) 455
HinP1I GCGC 1 cut(s) 455
HindIII AAGCTT 1 cut(s) 16
HinfI GANTC 3 cut(s) 70, 251, 463
HpaII CCGG 4 cut(s) 458, 473, 581, 994
HphI GGTGA 4 cut(s) 305, 550, 650, 1184
Hpy166II GTNNAC 3 cut(s) 280, 641, 656
Hpy188I TCNGA 7 cut(s) 268, 305, 665, 705, 802, 1012, 1166
Hpy188III TCNNGA 8 cut(s) 120, 364, 760, 1049, 1070, 1085, 1099, 1147
Hpy8I GTNNAC 3 cut(s) 280, 641, 656
Hpy99I CGWCG 4 cut(s) 173, 272, 278, 425
HpyAV CCTTC 5 cut(s) 268, 553, 654, 700, 1018
HpyCH4III ACNGT 1 cut(s) 238
HpyCH4IV ACGT 1 cut(s) 423
HpyCH4V TGCA 6 cut(s) 22, 28, 337, 399, 971, 1040
HpyF10VI GCNNNNNNNGC 8 cut(s) 270, 331, 517, 521, 530, 686, 707, 716
HpyF3I CTNAG 3 cut(s) 14, 1009, 1163
HpySE526I ACGT 1 cut(s) 423
Hsp92I GRCGYC 3 cut(s) 168, 273, 455
Hsp92II CATG 5 cut(s) 613, 638, 858, 980, 1073
HspAI GCGC 1 cut(s) 455
KasI GGCGCC 1 cut(s) 454
Kzo9I GATC 2 cut(s) 300, 733
LmnI GCTCC 3 cut(s) 269, 366, 1098
Lsp1109I GCAGC 6 cut(s) 12, 34, 309, 321, 616, 735
LweI GCATC 4 cut(s) 228, 379, 975, 1027
MaeI CTAG 1 cut(s) 648
MaeII ACGT 1 cut(s) 423
MaeIII GTNAC 4 cut(s) 311, 383, 443, 989
MalI GATC 2 cut(s) 302, 735
MboI GATC 2 cut(s) 300, 733
MboII GAAGA 6 cut(s) 31, 101, 214, 766, 890, 1037
MfeI CAATTG 1 cut(s) 963
MflI RGATCY 1 cut(s) 733
MhlI GDGCHC 1 cut(s) 1095
MlsI TGGCCA 1 cut(s) 515
MluCI AATT 4 cut(s) 104, 817, 963, 999
MluNI TGGCCA 1 cut(s) 515
Mly113I GGCGCC 1 cut(s) 455
MlyI GAGTC 3 cut(s) 64, 245, 472
MmeI TCCRAC 1 cut(s) 291
Mox20I TGGCCA 1 cut(s) 515
MroXI GAANNNNTTC 1 cut(s) 568
MscI TGGCCA 1 cut(s) 515
MseI TTAA 2 cut(s) 807, 938
Msp20I TGGCCA 1 cut(s) 515
MspA1I CMGCKG 2 cut(s) 25, 902
MspI CCGG 4 cut(s) 458, 473, 581, 994
MspR9I CCNGG 6 cut(s) 473, 582, 921, 995, 1109, 1115
MunI CAATTG 1 cut(s) 963
Mva1269I GAATGC 1 cut(s) 1066
MvaI CCWGG 3 cut(s) 921, 1109, 1115
MvnI CGCG 1 cut(s) 99
MwoI GCNNNNNNNGC 8 cut(s) 270, 331, 517, 521, 530, 686, 707, 716
NarI GGCGCC 1 cut(s) 455
NciI CCSGG 3 cut(s) 473, 582, 995
NcoI CCATGG 1 cut(s) 609
NdeII GATC 2 cut(s) 300, 733
NlaIII CATG 5 cut(s) 613, 638, 858, 980, 1073
NlaIV GGNNCC 4 cut(s) 112, 265, 456, 735
NmuCI GTSAC 2 cut(s) 311, 989
PagI TCATGA 1 cut(s) 1069
PctI GAATGC 1 cut(s) 1066
PdmI GAANNNNTTC 1 cut(s) 568
PflFI GACNNNGTC 1 cut(s) 272
PflMI CCANNNNNTGG 1 cut(s) 1114
Ple19I CGATCG 1 cut(s) 303
PleI GAGTC 3 cut(s) 64, 245, 471
PluTI GGCGCC 1 cut(s) 458
PpsI GAGTC 3 cut(s) 64, 245, 471
PpuMI RGGWCCY 1 cut(s) 181
Psp5II RGGWCCY 1 cut(s) 181
Psp6I CCWGG 3 cut(s) 919, 1107, 1113
PspFI CCCAGC 1 cut(s) 898
PspGI CCWGG 3 cut(s) 919, 1107, 1113
PspN4I GGNNCC 4 cut(s) 112, 265, 456, 735
PspPI GGNCC 3 cut(s) 181, 929, 1111
PspPPI RGGWCCY 1 cut(s) 181
PstI CTGCAG 2 cut(s) 30, 339
PstNI CAGNNNCTG 1 cut(s) 1114
PsuI RGATCY 1 cut(s) 733
PsyI GACNNNGTC 1 cut(s) 272
PvuI CGATCG 1 cut(s) 303
PvuII CAGCTG 2 cut(s) 25, 902
RsaI GTAC 4 cut(s) 47, 470, 767, 1055
RsaNI GTAC 4 cut(s) 46, 469, 766, 1054
SaqAI TTAA 2 cut(s) 807, 938
Sau3AI GATC 2 cut(s) 300, 733
Sau96I GGNCC 3 cut(s) 181, 929, 1111
SchI GAGTC 3 cut(s) 64, 245, 472
ScrFI CCNGG 6 cut(s) 473, 582, 921, 995, 1109, 1115
SduI GDGCHC 1 cut(s) 1095
SfaNI GCATC 4 cut(s) 228, 379, 975, 1027
SfcI CTRYAG 3 cut(s) 26, 65, 335
SfiI GGCCNNNNNGGCC 1 cut(s) 521
SfoI GGCGCC 1 cut(s) 456
SinI GGWCC 1 cut(s) 181
SmlI CTYRAG 1 cut(s) 1049
SmoI CTYRAG 1 cut(s) 1049
Sse9I AATT 4 cut(s) 104, 817, 963, 999
SspDI GGCGCC 1 cut(s) 454
SspMI CTAG 1 cut(s) 648
StyD4I CCNGG 6 cut(s) 471, 580, 919, 993, 1107, 1113
StyI CCWWGG 4 cut(s) 177, 609, 620, 873
TaaI ACNGT 1 cut(s) 238
TaiI ACGT 1 cut(s) 426
TaqI TCGA 3 cut(s) 192, 299, 591
TasI AATT 4 cut(s) 104, 817, 963, 999
TatI WGTACW 1 cut(s) 1053
TauI GCSGC 5 cut(s) 351, 354, 479, 536, 934
Tru1I TTAA 2 cut(s) 807, 938
Tru9I TTAA 2 cut(s) 807, 938
TseFI GTSAC 2 cut(s) 311, 989
TseI GCWGC 6 cut(s) 22, 25, 322, 334, 629, 723
Tsp45I GTSAC 2 cut(s) 311, 989
TspDTI ATGAA 2 cut(s) 766, 1058
TspGWI ACGGA 1 cut(s) 456
Tth111I GACNNNGTC 1 cut(s) 272
Van91I CCANNNNNTGG 1 cut(s) 1114
VpaK11BI GGWCC 1 cut(s) 181
XagI CCTNNNNNAGG 1 cut(s) 924
XapI RAATTY 1 cut(s) 817
XmiI GTMKAC 2 cut(s) 279, 655
XmnI GAANNNNTTC 1 cut(s) 568
XspI CTAG 1 cut(s) 648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.