Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000852

Physical Location & Seq

Genomic Coordinates Forward (+)

42575460 .. 42580529

Gene Structure 5070 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0252800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGCGACCACATCCTCCTCCTGCTTCTGCTTCTGCCCTTACGCTATGGCTCGCCCCACCAGAGTCCGAGCCCCTCGCACCCCTTCTTCCAAGAAACCAATACCGCCGAACCCTAACCCTAATCACAAGCAGCTCAGGCACCGGAACGGCGCGAAGGAGCTGGCCTCCATCGGAGTTGAGGCCACCACCTACACTCGCCTGCCGCCCAAAGACGACTTCTCTCTCCCTTCCTTGCTGGAGTTCTCCTCCGAAGTGAAGCTCTCCGAGTCGAGCGTTGCGGTGGAGGAGAAGAAGAAGAAGATTGCTGATTTGAGCGACGAGGAGGAGGAAGATGATGGCGGTGACGGTAAATTTGAGGTCTTTGAGGGGAGTTACGATTCTGAATTGGAGGATGAAGGGGTTGAGTATGAGTATGAGGAAATTGAGAGGGAAAGCGATGGCAAAGCGGTGAATTTGGATGGTGGTGGGGGTGAATCGGAGGAGGAGGAAGTGAAGGAGAAGGGAGTACCGGCGGTGATGAGGTGTTTTGACCGGGCGAAGATCTATGTGAAGTCAGGGGACGGCGGAAACGGCGTCGTGGCGATGCGGCGGGAGAAGTTCGTGCCTTTGGGGGGGCCGTCCGGAGGGGACGGAGGGCGAGGTGGAAATGTGTATATAGAGGTGGATGGGTCGATGAATTCGCTGCTGCCGTTTCGAAACAGCGTGCATTTTCGGGCTGGGAGAGGGGACCATGGGAGGGGGCAGTCGCAGAATGGGGCCAAGGGGGAGGATGTGGTGGTCAAGGTGGCGCCCGGGACGGTGATTAGGGAGGCAGGCAAGGAGGAGGTGCTGTTGGAGCTGTTGCATCCGGGGCAGCGTGGTTTGTTGCTGCCTGGAGGGAGAGGTGGGAGAGGGAATGCTTCGTTTAAGTCCGGGGCTAATAAGGTGCCCAGGATTGCTGAGAATGGTGCCGAGGGTCCGGAAATGTGGTTGGACCTGGAGCTAAAGCTAGTTGCAGATGTTGGAATTGTGGGGGCCCCAAATGCAGGGAAAAGCACACTGTTGAGTGTTATAAGTGCTGCTCAGCCAACAATAGCAAATTACCCCTTCACTACTTTACTTCCAAATCTGGGTGTTGTTTCTTTTGACTATGACTCGACGATGGTTGTAGCAGATCTACCAGGTTTACTTGAAGGTGCACACCGGGGTTTCGGATTGGGCCATGAGTTTCTGCGCCACACTGAGAGGTGTTCTGTCTTGGTACATGTTGTTGATGGCTCAGGCCAGCAGCCAGAATTTGAGTATGATGCAGTTCGTCTGGAATTGGAATTGTTTAGTCCTGAAATTGCTGAAAAGCCTTATATAGTCGCTTTTAACAAAATGGACCTTCCAGATGCAAAAGAACAGTGGCCATCATTCAAGGAAAACTTACAAGCTCGCGGGATTCAAGTTTTTTGCATGAGTGCAGTGAAAGGAGAGGGTACTCATGAGGTTATCAGCACTGCTTATCAGCTTCTACGAAGGAGCAAAGTGACCGAGGAGGAATTCAGAGAAGATCCGGTGGATTTAAATCATGTAGCCGATATGGTGCATAAGCAGCAAACCGCCTCTATTAATGAGTTTGAGATCTCTTACGACAGCGGTACCAATACCTGGCATGTTGTGGGATCTGGATTACAACGGTTTGTTCAGATGACAAATTGGCGATATATGGATTCTGAGAGAAGATTCCAACATGTTTTGGATGCTTGTGGTGTAAACAAGAATCTTAAGAAACGTGGTGTCAAAGAAGGTGACACCGTGCTTATTGGAGATATGGAAATGGTGTGGCATGATTCTGTTTCTGGTCCATCAAATTTAAAGAAAGGATCTGCAGAAACAACCAAGTGGGCTCAGTTTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_3

Protein Analysis

627

Amino Acids

68.63

Weight (kDa)

5.26

Isoelectric Point (pI)

42.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP1_OBG	PF01018	177 - 330	2.8e-53	GTP1/OBG
MMR_HSR1	PF01926	333 - 453	1.6e-23	50S ribosome-binding GTPase
FeoB_N	PF02421	334 - 493	4.2e-12	Ferrous iron transport protein B
DUF1967	PF09269	534 - 603	1.5e-21	Domain of unknown function (DUF1967)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24430
fragaria_vesca	FvH4_4g24680 FvH4_4g24790 FvH4_4g24800
malus_domestica	MD13G1108900.v1.1 MD13G1109000.v1.1 MD13G1109300.v1.1 MD16G1108700.v1.1
prunus_persica	Prupe.1G236500_v2.0.a1 Prupe.1G237100_v2.0.a1 Prupe.1G237200_v2.0.a1
pyrus_communis	pycom02g17280 pycom02g17290 pycom13g09440 pycom13g09450 pycom13g09510 pycom16g09290
rosa_chinensis	RchiOBHm_Chr4g0431801 RchiOBHm_Chr4g0431871 RchiOBHm_Chr4g0431881 RchiOBHm_Chr5g0028081
rosa_laevigata	RLG00000006879 RLG00000006881 RLG00000006888 RLG00000029541 RLG00000033062 RLG00000033064
rosa_multiflora	Rmu_co8339999.1_g000001 Rmu_co8463717.1_g000001 Rmu_sc0001459.1_g000012 Rmu_sc0002177.1_g000004 Rmu_sc0002177.1_g000006 Rmu_sc0004487.1_g000007 Rmu_sc0004487.1_g000008 Rmu_sc0008416.1_g000005
rosa_roxburghii	Rroxscaffold_1G00051580 Rroxscaffold_1G00051600 Rroxscaffold_4G00317340 Rroxscaffold_5G00373200 Rroxscaffold_5G00373260 Rroxscaffold_5G00373290
rosa_rugosa	Rorug01G0110900 Rorug04G0252400 Rorug04G0252700 Rorug04G0252800 Rorug05G0103900
rosa_samantha	Rh1BG102100 Rh4AG309000 Rh4AG309600 Rh4AG309700 Rh4BG316800 Rh4BG316900 Rh4CG332200 Rh4DG311900 Rh5AG177600 Rh5BG195700 Rh5CG215800 Rh5DG197400
rosa_wichuraiana	Rw0G009960 Rw1G011120 Rw1G011140 Rw1G011150 Rw4G026800 Rw4G026860 Rw4G026930 Rw4G026940 Rw5G018010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1052
Acc65I	GGTACC	1 cut(s)	1622
AccB1I	GGYRCC	5 cut(s)	138, 787, 925, 947, 1622
AccB7I	CCANNNNNTGG	1 cut(s)	1632
AccII	CGCG	2 cut(s)	152, 1419
AccIII	TCCGGA	2 cut(s)	620, 958
AclWI	GGATC	3 cut(s)	1529, 1654, 1855
AcoI	YGGCCR	1 cut(s)	1388
AcsI	RAATTY	6 cut(s)	350, 451, 676, 1274, 1523, 1834
AcyI	GRCGYC	2 cut(s)	573, 788
AfaI	GTAC	4 cut(s)	507, 1242, 1462, 1624
AfiI	CCNNNNNNNGG	6 cut(s)	611, 623, 736, 1025, 1109, 1632
AflII	CTTAAG	1 cut(s)	1748
AflIII	ACRYGT	2 cut(s)	1243, 1714
AgsI	TTSAA	3 cut(s)	1172, 1399, 1427
AjnI	CCWGG	5 cut(s)	871, 929, 975, 1159, 1631
AjuI	GAANNNNNNNTTGG	2 cut(s)	200, 232
AluBI	AGCT	8 cut(s)	133, 160, 259, 838, 982, 988, 1415, 1492
AluI	AGCT	8 cut(s)	133, 160, 259, 838, 982, 988, 1415, 1492
Alw21I	GWGCWC	1 cut(s)	1180
Alw44I	GTGCAC	1 cut(s)	1176
AlwI	GGATC	3 cut(s)	1529, 1654, 1855
Ama87I	CYCGRG	1 cut(s)	791
Aor13HI	TCCGGA	2 cut(s)	620, 958
AoxI	GGCC	8 cut(s)	162, 180, 614, 756, 1014, 1198, 1261, 1388
ApaI	GGGCCC	1 cut(s)	1018
ApaLI	GTGCAC	1 cut(s)	1176
ApeKI	GCWGC	8 cut(s)	130, 682, 685, 853, 868, 1058, 1267, 1576
ApoI	RAATTY	6 cut(s)	350, 451, 676, 1274, 1523, 1834
ArsI	GACNNNNNNTTYG	2 cut(s)	335, 367
AseI	ATTAAT	1 cut(s)	1593
Asp718I	GGTACC	1 cut(s)	1622
AspLEI	GCGC	3 cut(s)	152, 790, 1215
AsuC2I	CCSGG	6 cut(s)	533, 792, 793, 849, 913, 1184
AsuHPI	GGTGA	6 cut(s)	353, 460, 482, 526, 811, 1784
AsuII	TTCGAA	1 cut(s)	694
AvaI	CYCGRG	1 cut(s)	791
AvaII	GGWCC	5 cut(s)	727, 956, 973, 1363, 1826
BaeGI	GKGCMC	3 cut(s)	930, 1018, 1180
BaeI	ACNNNNGTAYC	2 cut(s)	1606, 1639
BalI	TGGCCA	1 cut(s)	1390
BanI	GGYRCC	5 cut(s)	138, 787, 925, 947, 1622
BanII	GRGCYC	3 cut(s)	73, 1018, 1873
Bbv12I	GWGCWC	1 cut(s)	1180
BbvI	GCAGC	8 cut(s)	142, 669, 672, 855, 865, 1045, 1279, 1588
BccI	CCATC	9 cut(s)	176, 329, 431, 452, 659, 1135, 1247, 1399, 1837
BceAI	ACGGC	5 cut(s)	163, 577, 586, 601, 673
BciT130I	CCWGG	5 cut(s)	873, 931, 977, 1161, 1633
BcnI	CCSGG	6 cut(s)	533, 792, 793, 849, 913, 1184
BfaI	CTAG	1 cut(s)	989
BfmI	CTRYAG	1 cut(s)	1851
BfoI	RGCGCY	1 cut(s)	791
BfrI	CTTAAG	1 cut(s)	1748
BglII	AGATCT	3 cut(s)	540, 1153, 1605
BlpI	GCTNAGC	1 cut(s)	1062
Bme18I	GGWCC	5 cut(s)	727, 956, 973, 1363, 1826
BmeT110I	CYCGRG	1 cut(s)	791
BmsI	GCATC	5 cut(s)	573, 853, 1276, 1363, 1714
BplI	GAGNNNNNCTC	4 cut(s)	149, 181, 230, 262
BpmI	CTGGAG	3 cut(s)	257, 894, 998
Bpu10I	CCTNAGC	2 cut(s)	134, 1258
Bpu1102I	GCTNAGC	1 cut(s)	1062
Bpu14I	TTCGAA	1 cut(s)	694
BpuMI	CCSGG	6 cut(s)	533, 792, 793, 849, 913, 1184
BsaBI	GATNNNNATC	1 cut(s)	1548
BsaHI	GRCGYC	2 cut(s)	573, 788
BsaJI	CCNNGG	9 cut(s)	730, 759, 791, 848, 912, 929, 951, 1183, 1515
BsaWI	WCCGGW	4 cut(s)	141, 620, 958, 1537
BsaXI	ACNNNNNCTCC	2 cut(s)	815, 845
Bsc4I	CCNNNNNNNGG	6 cut(s)	611, 623, 736, 1025, 1109, 1632
Bse118I	RCCGGY	1 cut(s)	508
Bse8I	GATNNNNATC	1 cut(s)	1548
BseAI	TCCGGA	2 cut(s)	620, 958
BseBI	CCWGG	5 cut(s)	873, 931, 977, 1161, 1633
BseDI	CCNNGG	9 cut(s)	730, 759, 791, 848, 912, 929, 951, 1183, 1515
BseGI	GGATG	7 cut(s)	11, 397, 463, 670, 775, 844, 1729
BseJI	GATNNNNATC	1 cut(s)	1548
BseLI	CCNNNNNNNGG	6 cut(s)	611, 623, 736, 1025, 1109, 1632
BseMII	CTCAG	6 cut(s)	148, 930, 1076, 1212, 1272, 1689
BseRI	GAGGAG	9 cut(s)	7, 235, 299, 335, 338, 494, 497, 836, 1532
BseSI	GKGCMC	3 cut(s)	930, 1018, 1180
BseXI	GCAGC	8 cut(s)	142, 669, 672, 855, 865, 1045, 1279, 1588
BseYI	CCCAGC	1 cut(s)	716
BsgI	GTGCAG	1 cut(s)	1464
Bsh1236I	CGCG	2 cut(s)	152, 1419
BshFI	GGCC	8 cut(s)	164, 182, 616, 758, 1016, 1200, 1263, 1390
BshNI	GGYRCC	5 cut(s)	138, 787, 925, 947, 1622
BsiHKAI	GWGCWC	1 cut(s)	1180
BsiHKCI	CYCGRG	1 cut(s)	791
BslFI	GGGAC	4 cut(s)	572, 641, 740, 808
BslI	CCNNNNNNNGG	6 cut(s)	611, 623, 736, 1025, 1109, 1632
BsmFI	GGGAC	4 cut(s)	572, 641, 740, 808
BsmI	GAATGC	1 cut(s)	901
BsnI	GGCC	8 cut(s)	164, 182, 616, 758, 1016, 1200, 1263, 1390
BsoBI	CYCGRG	1 cut(s)	791
Bsp119I	TTCGAA	1 cut(s)	694
Bsp120I	GGGCCC	1 cut(s)	1014
Bsp1286I	GDGCHC	5 cut(s)	73, 930, 1018, 1180, 1873
Bsp13I	TCCGGA	2 cut(s)	620, 958
Bsp143I	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
Bsp1720I	GCTNAGC	1 cut(s)	1062
Bsp19I	CCATGG	1 cut(s)	730
BspANI	GGCC	8 cut(s)	164, 182, 616, 758, 1016, 1200, 1263, 1390
BspCNI	CTCAG	6 cut(s)	147, 931, 1075, 1213, 1271, 1690
BspEI	TCCGGA	2 cut(s)	620, 958
BspFNI	CGCG	2 cut(s)	152, 1419
BspHI	TCATGA	1 cut(s)	1465
BspMAI	CTGCAG	1 cut(s)	1855
BspPI	GGATC	3 cut(s)	1529, 1654, 1855
BspT104I	TTCGAA	1 cut(s)	694
BspT107I	GGYRCC	5 cut(s)	138, 787, 925, 947, 1622
BspTI	CTTAAG	1 cut(s)	1748
BsrFI	RCCGGY	1 cut(s)	508
BssAI	RCCGGY	1 cut(s)	508
BssECI	CCNNGG	9 cut(s)	730, 759, 791, 848, 912, 929, 951, 1183, 1515
BssMI	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
BssNI	GRCGYC	2 cut(s)	573, 788
BssT1I	CCWWGG	2 cut(s)	730, 759
Bst2UI	CCWGG	5 cut(s)	873, 931, 977, 1161, 1633
Bst4CI	ACNGT	6 cut(s)	347, 799, 1041, 1386, 1662, 1780
BstACI	GRCGYC	2 cut(s)	573, 788
BstAFI	CTTAAG	1 cut(s)	1748
BstBI	TTCGAA	1 cut(s)	694
BstC8I	GCNNGC	7 cut(s)	52, 162, 200, 704, 814, 1265, 1417
BstDEI	CTNAG	7 cut(s)	134, 939, 1062, 1221, 1258, 1698, 1872
BstDSI	CCRYGG	1 cut(s)	730
BstF5I	GGATG	7 cut(s)	11, 397, 463, 670, 775, 844, 1729
BstFNI	CGCG	2 cut(s)	152, 1419
BstH2I	RGCGCY	1 cut(s)	791
BstHHI	GCGC	3 cut(s)	152, 790, 1215
BstKTI	GATC	6 cut(s)	543, 1156, 1537, 1608, 1649, 1850
BstMBI	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
BstMWI	GCNNNNNNNGC	6 cut(s)	136, 570, 835, 850, 1022, 1576
BstNI	CCWGG	5 cut(s)	873, 931, 977, 1161, 1633
BstNSI	RCATGY	3 cut(s)	1247, 1640, 1718
BstSFI	CTRYAG	1 cut(s)	1851
BstSLI	GKGCMC	3 cut(s)	930, 1018, 1180
BstUI	CGCG	2 cut(s)	152, 1419
BstV1I	GCAGC	8 cut(s)	142, 669, 672, 855, 865, 1045, 1279, 1588
BstX2I	RGATCY	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
BstYI	RGATCY	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
BsuRI	GGCC	8 cut(s)	164, 182, 616, 758, 1016, 1200, 1263, 1390
BtgI	CCRYGG	1 cut(s)	730
BtgZI	GCGATG	2 cut(s)	450, 596
BtsCI	GGATG	7 cut(s)	11, 397, 463, 670, 775, 844, 1729
BtsI	GCAGTG	2 cut(s)	1452, 1479
BtsIMutI	CAGTG	5 cut(s)	1037, 1218, 1391, 1452, 1479
Cac8I	GCNNGC	7 cut(s)	52, 162, 200, 704, 814, 1265, 1417
CciI	TCATGA	1 cut(s)	1465
CfoI	GCGC	3 cut(s)	152, 790, 1215
Cfr10I	RCCGGY	1 cut(s)	508
Cfr9I	CCCGGG	1 cut(s)	791
CseI	GACGC	1 cut(s)	562
CsiI	ACCWGGT	1 cut(s)	1159
Csp6I	GTAC	4 cut(s)	506, 1241, 1461, 1623
CviAII	CATG	9 cut(s)	731, 1202, 1244, 1438, 1466, 1553, 1637, 1715, 1811
CviQI	GTAC	4 cut(s)	506, 1241, 1461, 1623
DdeI	CTNAG	7 cut(s)	134, 939, 1062, 1221, 1258, 1698, 1872
DinI	GGCGCC	1 cut(s)	789
DpnI	GATC	6 cut(s)	542, 1155, 1536, 1607, 1648, 1849
DpnII	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
DraI	TTTAAA	2 cut(s)	1548, 1839
EaeI	YGGCCR	1 cut(s)	1388
EciI	GGCGGA	1 cut(s)	579
Eco130I	CCWWGG	2 cut(s)	730, 759
Eco24I	GRGCYC	3 cut(s)	73, 1018, 1873
Eco47I	GGWCC	5 cut(s)	727, 956, 973, 1363, 1826
Eco88I	CYCGRG	1 cut(s)	791
EcoO109I	RGGNCCY	2 cut(s)	1014, 1015
EcoRI	GAATTC	2 cut(s)	676, 1523
EcoRII	CCWGG	5 cut(s)	871, 929, 975, 1159, 1631
EcoT14I	CCWWGG	2 cut(s)	730, 759
EcoT38I	GRGCYC	3 cut(s)	73, 1018, 1873
EgeI	GGCGCC	1 cut(s)	789
EheI	GGCGCC	1 cut(s)	789
ErhI	CCWWGG	2 cut(s)	730, 759
FaeI	CATG	9 cut(s)	734, 1205, 1247, 1441, 1469, 1556, 1640, 1718, 1814
FalI	AAGNNNNNCTT	2 cut(s)	1391, 1423
FaqI	GGGAC	4 cut(s)	572, 641, 740, 808
FatI	CATG	9 cut(s)	730, 1201, 1243, 1437, 1465, 1552, 1636, 1714, 1810
FauI	CCCGC	2 cut(s)	582, 1412
FokI	GGATG	6 cut(s)	404, 470, 677, 782, 831, 1736
FriOI	GRGCYC	3 cut(s)	73, 1018, 1873
FspBI	CTAG	1 cut(s)	989
GlaI	GCGC	3 cut(s)	151, 789, 1214
GsaI	CCCAGC	1 cut(s)	720
GsuI	CTGGAG	3 cut(s)	257, 894, 998
HaeII	RGCGCY	1 cut(s)	791
HaeIII	GGCC	8 cut(s)	164, 182, 616, 758, 1016, 1200, 1263, 1390
HgaI	GACGC	1 cut(s)	562
HhaI	GCGC	3 cut(s)	152, 790, 1215
Hin1I	GRCGYC	2 cut(s)	573, 788
Hin1II	CATG	9 cut(s)	734, 1205, 1247, 1441, 1469, 1556, 1640, 1718, 1814
Hin6I	GCGC	3 cut(s)	150, 788, 1213
HinP1I	GCGC	3 cut(s)	150, 788, 1213
HphI	GGTGA	6 cut(s)	353, 460, 482, 526, 811, 1784
Hpy166II	GTNNAC	3 cut(s)	1166, 1178, 1738
Hpy188III	TCNNGA	7 cut(s)	621, 959, 1298, 1319, 1370, 1466, 1650
Hpy8I	GTNNAC	3 cut(s)	1166, 1178, 1738
Hpy99I	CGWCG	3 cut(s)	320, 578, 1141
HpyCH4III	ACNGT	6 cut(s)	347, 799, 1041, 1386, 1662, 1780
HpyCH4IV	ACGT	1 cut(s)	1756
HpyF10VI	GCNNNNNNNGC	6 cut(s)	136, 570, 835, 850, 1022, 1576
HpyF3I	CTNAG	7 cut(s)	134, 939, 1062, 1221, 1258, 1698, 1872
HpySE526I	ACGT	1 cut(s)	1756
Hsp92I	GRCGYC	2 cut(s)	573, 788
Hsp92II	CATG	9 cut(s)	734, 1205, 1247, 1441, 1469, 1556, 1640, 1718, 1814
HspAI	GCGC	3 cut(s)	150, 788, 1213
KasI	GGCGCC	1 cut(s)	787
Kpn2I	TCCGGA	2 cut(s)	620, 958
KpnI	GGTACC	1 cut(s)	1626
Kzo9I	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
LmnI	GCTCC	4 cut(s)	157, 835, 979, 1503
Lsp1109I	GCAGC	8 cut(s)	142, 669, 672, 855, 865, 1045, 1279, 1588
LweI	GCATC	5 cut(s)	573, 853, 1276, 1363, 1714
MabI	ACCWGGT	1 cut(s)	1159
MaeI	CTAG	1 cut(s)	989
MaeII	ACGT	1 cut(s)	1756
MaeIII	GTNAC	4 cut(s)	341, 371, 1510, 1772
MalI	GATC	6 cut(s)	542, 1155, 1536, 1607, 1648, 1849
MboI	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
MboII	GAAGA	9 cut(s)	78, 301, 304, 307, 310, 341, 550, 1544, 1716
MflI	RGATCY	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
MhlI	GDGCHC	5 cut(s)	73, 930, 1018, 1180, 1873
MlsI	TGGCCA	1 cut(s)	1390
MluNI	TGGCCA	1 cut(s)	1390
Mly113I	GGCGCC	1 cut(s)	788
MlyI	GAGTC	3 cut(s)	72, 275, 1127
MmeI	TCCRAC	4 cut(s)	813, 951, 982, 1735
Mox20I	TGGCCA	1 cut(s)	1390
MroI	TCCGGA	2 cut(s)	620, 958
MscI	TGGCCA	1 cut(s)	1390
MseI	TTAA	7 cut(s)	906, 1353, 1547, 1593, 1749, 1838, 1878
Msp20I	TGGCCA	1 cut(s)	1390
MspA1I	CMGCKG	1 cut(s)	1620
MspCI	CTTAAG	1 cut(s)	1748
Mva1269I	GAATGC	1 cut(s)	901
MvaI	CCWGG	5 cut(s)	873, 931, 977, 1161, 1633
MvnI	CGCG	2 cut(s)	152, 1419
MwoI	GCNNNNNNNGC	6 cut(s)	136, 570, 835, 850, 1022, 1576
NarI	GGCGCC	1 cut(s)	788
NciI	CCSGG	6 cut(s)	533, 792, 793, 849, 913, 1184
NcoI	CCATGG	1 cut(s)	730
NdeII	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
NlaIII	CATG	9 cut(s)	734, 1205, 1247, 1441, 1469, 1556, 1640, 1718, 1814
NmeAIII	GCCGAG	1 cut(s)	976
NmuCI	GTSAC	3 cut(s)	341, 1510, 1772
NspI	RCATGY	3 cut(s)	1247, 1640, 1718
NspV	TTCGAA	1 cut(s)	694
PagI	TCATGA	1 cut(s)	1465
PciI	ACATGT	2 cut(s)	1243, 1714
PcsI	WCGNNNNNNNCGW	1 cut(s)	686
PctI	GAATGC	1 cut(s)	901
PfeI	GAWTC	7 cut(s)	377, 473, 1423, 1694, 1707, 1744, 1814
PflMI	CCANNNNNTGG	1 cut(s)	1632
PleI	GAGTC	3 cut(s)	71, 274, 1127
PluTI	GGCGCC	1 cut(s)	791
PpsI	GAGTC	3 cut(s)	71, 274, 1127
PscI	ACATGT	2 cut(s)	1243, 1714
PshBI	ATTAAT	1 cut(s)	1593
PsiI	TTATAA	1 cut(s)	1052
Psp6I	CCWGG	5 cut(s)	871, 929, 975, 1159, 1631
PspFI	CCCAGC	1 cut(s)	716
PspGI	CCWGG	5 cut(s)	871, 929, 975, 1159, 1631
PspOMI	GGGCCC	1 cut(s)	1014
PstI	CTGCAG	1 cut(s)	1855
PsuI	RGATCY	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
RsaI	GTAC	4 cut(s)	507, 1242, 1462, 1624
RsaNI	GTAC	4 cut(s)	506, 1241, 1461, 1623
SaqAI	TTAA	7 cut(s)	906, 1353, 1547, 1593, 1749, 1838, 1878
Sau3AI	GATC	6 cut(s)	540, 1153, 1534, 1605, 1646, 1847
SchI	GAGTC	3 cut(s)	72, 275, 1127
SduI	GDGCHC	5 cut(s)	73, 930, 1018, 1180, 1873
SexAI	ACCWGGT	1 cut(s)	1159
SfaNI	GCATC	5 cut(s)	573, 853, 1276, 1363, 1714
SfcI	CTRYAG	1 cut(s)	1851
SfoI	GGCGCC	1 cut(s)	789
SfuI	TTCGAA	1 cut(s)	694
SinI	GGWCC	5 cut(s)	727, 956, 973, 1363, 1826
SmaI	CCCGGG	1 cut(s)	793
SmiI	ATTTAAAT	1 cut(s)	1548
SmlI	CTYRAG	1 cut(s)	1748
SmoI	CTYRAG	1 cut(s)	1748
SspDI	GGCGCC	1 cut(s)	787
SspMI	CTAG	1 cut(s)	989
StyI	CCWWGG	2 cut(s)	730, 759
SwaI	ATTTAAAT	1 cut(s)	1548
TaaI	ACNGT	6 cut(s)	347, 799, 1041, 1386, 1662, 1780
TaiI	ACGT	1 cut(s)	1759
TaqI	TCGA	4 cut(s)	269, 671, 694, 1136
TaqII	GACCGA	1 cut(s)	1529
TauI	GCSGC	2 cut(s)	205, 589
TfiI	GAWTC	7 cut(s)	377, 473, 1423, 1694, 1707, 1744, 1814
Tru1I	TTAA	7 cut(s)	906, 1353, 1547, 1593, 1749, 1838, 1878
Tru9I	TTAA	7 cut(s)	906, 1353, 1547, 1593, 1749, 1838, 1878
TscAI	CASTG	5 cut(s)	1044, 1225, 1391, 1452, 1486
TseFI	GTSAC	3 cut(s)	341, 1510, 1772
TseI	GCWGC	8 cut(s)	130, 682, 685, 853, 868, 1058, 1267, 1576
Tsp45I	GTSAC	3 cut(s)	341, 1510, 1772
TspDTI	ATGAA	2 cut(s)	408, 689
TspGWI	ACGGA	1 cut(s)	645
TspMI	CCCGGG	1 cut(s)	791
TspRI	CASTG	5 cut(s)	1044, 1225, 1391, 1452, 1486
Van91I	CCANNNNNTGG	1 cut(s)	1632
Vha464I	CTTAAG	1 cut(s)	1748
VneI	GTGCAC	1 cut(s)	1176
VpaK11BI	GGWCC	5 cut(s)	727, 956, 973, 1363, 1826
VspI	ATTAAT	1 cut(s)	1593
XapI	RAATTY	6 cut(s)	350, 451, 676, 1274, 1523, 1834
XceI	RCATGY	3 cut(s)	1247, 1640, 1718
XmaI	CCCGGG	1 cut(s)	791
XspI	CTAG	1 cut(s)	989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.