Rmu_ssc0000092.1_g000034

Protein MODIFIER OF SNC1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000092.1
OG0003588
Physical Location & Seq
Reverse (-)
160372 .. 165995
5624 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3642 bp
atgacgtcgagtatgttgtctggggatcggaggtgggcttctgccagaagaggtgcaatgactgttttagggaaagtcccgaagcctataaatttacccagtcagaggttagaaaatcatggtatggatccatctgtggaaattgttcccaagggcactctcagttggggcagtagatcatcatctgcatcaaatgcatggggtacctcatcactttctccaaatactgatggtggcaccacttcaccaagttatctcagtggccacatttcttcaggaagtggcactcgaccgtcaactgctggtagtgaaaaatctcatgaacctgctgctagcgcgtggggtccaaactctaggccatcatcggcctctggggtattgacatcaaatcagacgtcactggcatcattgcgccctcgcagtgcagaaccaaggcctggtagttcacagttgtcaagatttgctgaacactctgaacatccagtggcatggaatgctcctgggactgcagaaaaattgggagtgacgtcatcaaagaatgaagggttttctctcacttctggtgactttccgactctcggttcagaaaaggataattctggaaagaatgctgagtctcaagctgatgccatcccagtgaagaaattggaaactgaagcctgtggcacacaagatattgcacaaacactctctgcaaaagaccccagtctgattcagaaaatagagggattaaatgccaaagcacgagtttctgatggacgaggtgatactgcatctgtttccattagggaggagcaaaggaagacattccaagtcaaccctaaatctaacagttcagtaaatgaaccaggtagtggctcggccactgaaatcataaattcctctcatgaagtcagcagtggaatttctgtctccaggggacctgctcatggcatgcatggtaaatcagataatcgtggtagaggaaggtttaataaccaagaaggcgacggctgggggaagaaatccttggtctctgaaccaacatctgtggtgtcaactgcaaattcaaaagttccttctaatgttcatgtgcatgaccaccttgcttccatggaagctactgaaaagtctggatcttatccacaaggcagacgtgaagacgactcattgacaccaatgtttgatccaaatgattctgaggcacagcgtgctaagatgaaggagctagccaagcaacgtaccaaacagcttcaggaggaagaggaggagcggacaagaaggcagatggcgaaggctcgagcaaaattagaagagttgaacagacgtactcaagtggtggacggttcaaatcaaaagtttgaaaattcctccagtggtgatgtccagagtaaacaagaagaatctcaaacttctggtgaaccattagtggccggtaggaaatatgatccacaagtcccagctttcggttctaacctcaatgctgttgaacagattaaagagtgcatcagtgttgaagttgcagaatcaactgttccatcaattgagctaccttcggagaggccaaagagtgcctacaaggaggagcccattttcatgcatgatcaacctgtgcctttgcagcagcaggttactattgctaatactgctcatcacaacactgcttcccaggctcatgatagcagtatctcaaggcagaagcaggcacctaaacaaaagcagaacactcggttggaaaagaagtctattgggaagaatacttccactagtatgactgacacaccaaatagtcagacagatacagtggttaatgtgtcctcatctggtggagttggagctacttcaactgcattgagtactgagtcaagcctgactgcaaattctagtgctatacttgagtcatcttctcatccaagaaagaaaaataacagaagtggcaagaacaagcagagagcagagaattcatcatctgtggctgctatatcatcatctatatcaaatgatacaaatcatgcaaacaccactatagaaactggaaaaccaaatgtacctaatgtggatttagatcctagctcagttcagtcacagaccttttctagggatgcatatcagtcgatggagcagcacttgtctctaccaaacgaagaatctcaaggtagattaagtggccagtggaaacctcagcattctcgccggatgcctaggaattcacaagcaatcaggcactcggaaaaatttcaaagcagcgatgctgttatgtgggcaccagtgcggtcacagaacaaaactgatgtaactgatgatgccatccccaaaaccgaagctgaggctgtcagtgctgtaaagagcgaccatcaagtgcaaaataattcaagaaataagagggcggaaatggagagatatgttccaaagcctgtagctaaagaaatggcacatcaaggaagcactcaacaagcaatggtttctgtagtgcatcagactgcaataaatgagaacatcaggggagcagattctggtcctcctcaaggtgtcgaaaattctcaacctagtgctgcagtgggaaaagcaggttttgccatagaatccaggaatgggagtagcaggcaaaataagcaggtaaaagcacatgggtcgtggcgacaacggggatcaacagaaccaaccaacacgcaaggtttccatgaggaaccatcatatacttcaaatgttggtcagagtgatattgtctcagtgacagagcaaccaaagaattctgatgattggaatgatggatggaacatgccggatgaacccaacactgttgttccagtctctgcatctattgctgtaaaagaacagggaatacccggaagacgaaagcagcatccatttaagggacaaaaaattgtggcaaataatcatgatcatgagcaaaagaaaaactataggggggatgctgacagaatctacaccaaatcttcagcctctgaaatgagtcaaacagagttaccttctgcttctaaagagaatcaagctgttggggaacgtgcaattcctcattggcagcccaaatctcaggcatttgcagccaataatcatcgaggaaacagggctactggtccccaaggtgcagagccactctcaccaactgacaaagataccactgaacatctggctcagcatcgacatgatcaatacaagtctgaaagaaacaatgcaggggaagcacagaacaggagggagaggaaaacaacacacaagggacgtcccggctccccaagtcatggtcctgtcagcccagtcgaactggctcctcctagtatggatgctagacaagagcatcagtttcaaacggggtttcgaaggaatggaaaccaaaacaaccgtttcagcagagggcaagagtctcgtggggattggaattactcggggcatgatggtaggcagcaaaacccccctgcaaatcgggacaggcagaggcacagttcccatttggagtaccagccagttgggccatacaacagcagtgacaaatttaacaattccgagggacctagagaaggtgctcagaattcaggtggtggaagggtcaaggaaagagtccagggtcattcgaaacgtagtggagggaacttccatgggcggcaaagtggcactattcgagtagtgccggatatggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAT2_N

Protein Analysis

1213

Amino Acids

131.55

Weight (kDa)

9.25

Isoelectric Point (pI)

54.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAT2_N PF07001 15 - 128 1.5e-06 BAT2 N-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 4 cut(s) 8, 398, 530, 3226
Acc36I ACCTGC 5 cut(s) 334, 931, 1597, 2537, 2584
Acc65I GGTACC 1 cut(s) 203
AccB1I GGYRCC 4 cut(s) 203, 236, 1684, 2242
AccB7I CCANNNNNTGG 3 cut(s) 437, 854, 3242
AccBSI CCGCTC 1 cut(s) 1252
AccII CGCG 1 cut(s) 338
AciI CCGC 4 cut(s) 1252, 2251, 2366, 3601
AclWI GGATC 8 cut(s) 33, 122, 135, 1123, 1160, 1421, 2039, 2635
AcoI YGGCCR 4 cut(s) 262, 861, 1410, 2146
AcuI CTGAAG 4 cut(s) 258, 675, 1217, 2922
AcyI GRCGYC 4 cut(s) 5, 395, 527, 3223
AdeI CACNNNGTG 1 cut(s) 1190
AfaI GTAC 6 cut(s) 205, 1222, 1309, 1837, 2028, 3458
AhlI ACTAGT 1 cut(s) 1745
AjiI CACGTC 1 cut(s) 1136
AjnI CCWGG 7 cut(s) 436, 499, 847, 914, 1647, 2564, 3561
AjuI GAANNNNNNNTTGG 4 cut(s) 992, 1024, 1694, 1726
Alw21I GWGCWC 1 cut(s) 3526
Alw26I GTCTC 7 cut(s) 621, 916, 1018, 2115, 2710, 2794, 3369
AlwI GGATC 8 cut(s) 33, 122, 135, 1123, 1160, 1421, 2039, 2635
AlwNI CAGNNNCTG 3 cut(s) 2492, 2792, 2945
Ama87I CYCGRG 2 cut(s) 1278, 3385
AoxI GGCC 9 cut(s) 262, 356, 366, 434, 861, 1410, 1541, 2146, 3470
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
Asp700I GAANNNNTTC 3 cut(s) 144, 806, 2214
Asp718I GGTACC 1 cut(s) 203
AspA2I CCTAGG 1 cut(s) 2180
AspLEI GCGC 2 cut(s) 338, 414
AspS9I GGNCC 7 cut(s) 344, 920, 2495, 3077, 3245, 3470, 3509
AsuC2I CCSGG 2 cut(s) 2826, 3228
AsuHPI GGTGA 6 cut(s) 237, 575, 776, 1370, 1409, 3093
AsuII TTCGAA 2 cut(s) 3319, 3572
AsuNHI GCTAGC 2 cut(s) 332, 1207
AvaI CYCGRG 2 cut(s) 1278, 3385
AvaII GGWCC 6 cut(s) 344, 920, 2495, 3077, 3245, 3509
AvrII CCTAGG 1 cut(s) 2180
BaeGI GKGCMC 2 cut(s) 158, 2245
BaeI ACNNNNGTAYC 2 cut(s) 1770, 1803
BalI TGGCCA 2 cut(s) 264, 2148
BamHI GGATCC 1 cut(s) 127
BanI GGYRCC 4 cut(s) 203, 236, 1684, 2242
BanII GRGCYC 1 cut(s) 1569
BauI CACGAG 2 cut(s) 744, 3366
BbsI GAAGAC 3 cut(s) 809, 1146, 2836
Bbv12I GWGCWC 1 cut(s) 3526
BbvCI CCTCAGC 2 cut(s) 2160, 2304
BceAI ACGGC 1 cut(s) 1006
BcgI CGANNNNNNTGC 8 cut(s) 1688, 1722, 2073, 2107, 2592, 2626, 3347, 3381
BciT130I CCWGG 7 cut(s) 438, 501, 849, 916, 1649, 2566, 3563
BclI TGATCA 3 cut(s) 1582, 2881, 3148
BcnI CCSGG 2 cut(s) 2826, 3228
BcoDI GTCTC 7 cut(s) 621, 916, 1018, 2115, 2710, 2794, 3369
BcuI ACTAGT 1 cut(s) 1745
BfmI CTRYAG 6 cut(s) 507, 2004, 2394, 2445, 2532, 2902
BfuAI ACCTGC 5 cut(s) 334, 931, 1597, 2537, 2584
BglI GCCNNNNNGGC 1 cut(s) 3469
BlnI CCTAGG 1 cut(s) 2180
BlpI GCTNAGC 1 cut(s) 3135
BmcAI AGTACT 1 cut(s) 1837
Bme1390I CCNGG 9 cut(s) 438, 501, 849, 916, 1649, 2566, 2826, 3228, 3563
Bme18I GGWCC 6 cut(s) 344, 920, 2495, 3077, 3245, 3509
BmeT110I CYCGRG 2 cut(s) 1278, 3385
BmgBI CACGTC 1 cut(s) 1136
BmgT120I GGNCC 7 cut(s) 344, 920, 2495, 3077, 3245, 3470, 3509
BmrFI CCNGG 9 cut(s) 438, 501, 849, 916, 1649, 2566, 2826, 3228, 3563
BmrI ACTGGG 4 cut(s) 93, 629, 699, 3251
BmtI GCTAGC 2 cut(s) 336, 1211
BmuI ACTGGG 4 cut(s) 93, 629, 699, 3251
BoxI GACNNNNGTC 1 cut(s) 705
BpiI GAAGAC 3 cut(s) 809, 1146, 2836
BplI GAGNNNNNCTC 2 cut(s) 3083, 3115
BpmI CTGGAG 2 cut(s) 898, 1336
Bpu10I CCTNAGC 2 cut(s) 2160, 2304
Bpu1102I GCTNAGC 1 cut(s) 3135
Bpu14I TTCGAA 2 cut(s) 3319, 3572
BpuEI CTTGAG 6 cut(s) 603, 1296, 1654, 1895, 2115, 2487
BpuMI CCSGG 2 cut(s) 2826, 3228
BsaBI GATNNNNATC 4 cut(s) 181, 1986, 2043, 2085
BsaHI GRCGYC 4 cut(s) 5, 395, 527, 3223
BsaI GGTCTC 1 cut(s) 1018
Bse118I RCCGGY 1 cut(s) 1412
Bse3DI GCAATG 3 cut(s) 63, 407, 2442
Bse8I GATNNNNATC 4 cut(s) 181, 1986, 2043, 2085
BseBI CCWGG 7 cut(s) 438, 501, 849, 916, 1649, 2566, 3563
BseJI GATNNNNATC 4 cut(s) 181, 1986, 2043, 2085
BseMI GCAATG 3 cut(s) 63, 407, 2442
BseRI GAGGAG 6 cut(s) 806, 1259, 1262, 1577, 2490, 3261
BseSI GKGCMC 2 cut(s) 158, 2245
BseYI CCCAGC 2 cut(s) 993, 1438
BsgI GTGCAG 2 cut(s) 444, 3108
Bsh1236I CGCG 1 cut(s) 338
Bsh1285I CGRYCG 1 cut(s) 293
BshFI GGCC 9 cut(s) 264, 358, 368, 436, 863, 1412, 1543, 2148, 3472
BshNI GGYRCC 4 cut(s) 203, 236, 1684, 2242
BsiEI CGRYCG 1 cut(s) 293
BsiHKAI GWGCWC 1 cut(s) 3526
BsiHKCI CYCGRG 2 cut(s) 1278, 3385
BsiSI CCGG 6 cut(s) 1413, 2173, 2762, 2826, 3228, 3629
BsmAI GTCTC 7 cut(s) 621, 916, 1018, 2115, 2710, 2794, 3369
BsmI GAATGC 3 cut(s) 499, 613, 2164
BsnI GGCC 9 cut(s) 264, 358, 368, 436, 863, 1412, 1543, 2148, 3472
Bso31I GGTCTC 1 cut(s) 1018
BsoBI CYCGRG 2 cut(s) 1278, 3385
Bsp119I TTCGAA 2 cut(s) 3319, 3572
Bsp1286I GDGCHC 4 cut(s) 158, 1569, 2245, 3526
Bsp1720I GCTNAGC 1 cut(s) 3135
Bsp19I CCATGG 2 cut(s) 1092, 3595
BspACI CCGC 4 cut(s) 1252, 2251, 2366, 3601
BspANI GGCC 9 cut(s) 264, 358, 368, 436, 863, 1412, 1543, 2148, 3472
BspFNI CGCG 1 cut(s) 338
BspHI TCATGA 5 cut(s) 319, 886, 1654, 2878, 2884
BspMAI CTGCAG 2 cut(s) 511, 2536
BspMI ACCTGC 5 cut(s) 334, 931, 1597, 2537, 2584
BspOI GCTAGC 2 cut(s) 336, 1211
BspPI GGATC 8 cut(s) 33, 122, 135, 1123, 1160, 1421, 2039, 2635
BspT104I TTCGAA 2 cut(s) 3319, 3572
BspT107I GGYRCC 4 cut(s) 203, 236, 1684, 2242
BspTNI GGTCTC 1 cut(s) 1018
BsrBI CCGCTC 1 cut(s) 1252
BsrDI GCAATG 3 cut(s) 63, 407, 2442
BsrFI RCCGGY 1 cut(s) 1412
BssAI RCCGGY 1 cut(s) 1412
BssNI GRCGYC 4 cut(s) 5, 395, 527, 3223
BssSI CACGAG 2 cut(s) 744, 3366
BssT1I CCWWGG 7 cut(s) 150, 431, 1008, 1092, 2180, 3082, 3595
Bst2BI CACGAG 2 cut(s) 744, 3366
Bst2UI CCWGG 7 cut(s) 438, 501, 849, 916, 1649, 2566, 3563
Bst6I CTCTTC 3 cut(s) 43, 1236, 1287
BstACI GRCGYC 4 cut(s) 5, 395, 527, 3223
BstAPI GCANNNNNTGC 5 cut(s) 194, 494, 1190, 2552, 2801
BstBI TTCGAA 2 cut(s) 3319, 3572
BstC8I GCNNGC 6 cut(s) 334, 935, 1191, 1209, 1683, 2582
BstDSI CCRYGG 2 cut(s) 1092, 3595
BstENI CCTNNNNNAGG 3 cut(s) 2074, 2502, 3516
BstFNI CGCG 1 cut(s) 338
BstHHI GCGC 2 cut(s) 338, 414
BstMAI GTCTC 7 cut(s) 621, 916, 1018, 2115, 2710, 2794, 3369
BstMCI CGRYCG 1 cut(s) 293
BstNI CCWGG 7 cut(s) 438, 501, 849, 916, 1649, 2566, 3563
BstNSI RCATGY 2 cut(s) 937, 2761
BstPAI GACNNNNGTC 1 cut(s) 705
BstSCI CCNGG 9 cut(s) 436, 499, 847, 914, 1647, 2564, 2824, 3226, 3561
BstSFI CTRYAG 6 cut(s) 507, 2004, 2394, 2445, 2532, 2902
BstSLI GKGCMC 2 cut(s) 158, 2245
BstUI CGCG 1 cut(s) 338
BstV2I GAAGAC 3 cut(s) 809, 1146, 2836
BstX2I RGATCY 3 cut(s) 127, 1115, 2044
BstXI CCANNNNNNTGG 2 cut(s) 489, 3467
BstYI RGATCY 3 cut(s) 127, 1115, 2044
BsuRI GGCC 9 cut(s) 264, 358, 368, 436, 863, 1412, 1543, 2148, 3472
BtgI CCRYGG 2 cut(s) 1092, 3595
BtgZI GCGATG 1 cut(s) 2241
BtrI CACGTC 1 cut(s) 1136
BtsI GCAGTG 5 cut(s) 427, 904, 1638, 2541, 3490
BveI ACCTGC 5 cut(s) 334, 931, 1597, 2537, 2584
Cac8I GCNNGC 6 cut(s) 334, 935, 1191, 1209, 1683, 2582
CaiI CAGNNNCTG 3 cut(s) 2492, 2792, 2945
CciI TCATGA 5 cut(s) 319, 886, 1654, 2878, 2884
CfoI GCGC 2 cut(s) 338, 414
Cfr10I RCCGGY 1 cut(s) 1412
Cfr13I GGNCC 7 cut(s) 344, 920, 2495, 3077, 3245, 3470, 3509
CsiI ACCWGGT 1 cut(s) 847
Csp6I GTAC 6 cut(s) 204, 1221, 1308, 1836, 2027, 3457
CspCI CAANNNNNGTGG 2 cut(s) 1011, 1046
CviQI GTAC 6 cut(s) 204, 1221, 1308, 1836, 2027, 3457
DraIII CACNNNGTG 1 cut(s) 1190
EaeI YGGCCR 4 cut(s) 262, 861, 1410, 2146
Eam1104I CTCTTC 3 cut(s) 43, 1236, 1287
EarI CTCTTC 3 cut(s) 43, 1236, 1287
EciI GGCGGA 1 cut(s) 2381
Eco130I CCWWGG 7 cut(s) 150, 431, 1008, 1092, 2180, 3082, 3595
Eco147I AGGCCT 1 cut(s) 436
Eco24I GRGCYC 1 cut(s) 1569
Eco31I GGTCTC 1 cut(s) 1018
Eco47I GGWCC 6 cut(s) 344, 920, 2495, 3077, 3245, 3509
Eco57I CTGAAG 4 cut(s) 258, 675, 1217, 2922
Eco88I CYCGRG 2 cut(s) 1278, 3385
EcoNI CCTNNNNNAGG 3 cut(s) 2074, 2502, 3516
EcoO109I RGGNCCY 2 cut(s) 920, 3509
EcoRI GAATTC 4 cut(s) 1939, 2185, 2728, 3529
EcoRII CCWGG 7 cut(s) 436, 499, 847, 914, 1647, 2564, 3561
EcoT14I CCWWGG 7 cut(s) 150, 431, 1008, 1092, 2180, 3082, 3595
EcoT22I ATGCAT 4 cut(s) 199, 939, 1581, 2086
EcoT38I GRGCYC 1 cut(s) 1569
ErhI CCWWGG 7 cut(s) 150, 431, 1008, 1092, 2180, 3082, 3595
FalI AAGNNNNNCTT 2 cut(s) 992, 1024
FbaI TGATCA 3 cut(s) 1582, 2881, 3148
FriOI GRGCYC 1 cut(s) 1569
GlaI GCGC 2 cut(s) 337, 413
GsaI CCCAGC 2 cut(s) 997, 1442
GsuI CTGGAG 2 cut(s) 898, 1336
HaeIII GGCC 9 cut(s) 264, 358, 368, 436, 863, 1412, 1543, 2148, 3472
HapII CCGG 6 cut(s) 1413, 2173, 2762, 2826, 3228, 3629
HhaI GCGC 2 cut(s) 338, 414
Hin1I GRCGYC 4 cut(s) 5, 395, 527, 3223
Hin6I GCGC 2 cut(s) 336, 412
HinP1I GCGC 2 cut(s) 336, 412
HincII GTYRAC 3 cut(s) 297, 817, 1038
HindII GTYRAC 3 cut(s) 297, 817, 1038
HpaII CCGG 6 cut(s) 1413, 2173, 2762, 2826, 3228, 3629
HphI GGTGA 6 cut(s) 237, 575, 776, 1370, 1409, 3093
Hpy166II GTNNAC 7 cut(s) 297, 446, 817, 1038, 1321, 1373, 1400
Hpy8I GTNNAC 7 cut(s) 297, 446, 817, 1038, 1321, 1373, 1400
Hpy99I CGWCG 2 cut(s) 10, 992
HpyCH4IV ACGT 9 cut(s) 5, 395, 527, 1135, 1219, 1306, 3004, 3223, 3577
HpySE526I ACGT 9 cut(s) 5, 395, 527, 1135, 1219, 1306, 3004, 3223, 3577
Hsp92I GRCGYC 4 cut(s) 5, 395, 527, 3223
HspAI GCGC 2 cut(s) 336, 412
KpnI GGTACC 1 cut(s) 207
Ksp22I TGATCA 3 cut(s) 1582, 2881, 3148
MabI ACCWGGT 1 cut(s) 847
MaeII ACGT 9 cut(s) 5, 395, 527, 1135, 1219, 1306, 3004, 3223, 3577
MbiI CCGCTC 1 cut(s) 1252
MfeI CAATTG 1 cut(s) 1521
MflI RGATCY 3 cut(s) 127, 1115, 2044
MhlI GDGCHC 4 cut(s) 158, 1569, 2245, 3526
MlsI TGGCCA 2 cut(s) 264, 2148
MluNI TGGCCA 2 cut(s) 264, 2148
MlyI GAGTC 8 cut(s) 568, 623, 1139, 1850, 1886, 2962, 3371, 3567
MmeI TCCRAC 3 cut(s) 596, 1692, 1792
Mox20I TGGCCA 2 cut(s) 264, 2148
Mph1103I ATGCAT 4 cut(s) 199, 939, 1581, 2086
MroXI GAANNNNTTC 3 cut(s) 144, 806, 2214
MscI TGGCCA 2 cut(s) 264, 2148
MseI TTAA 7 cut(s) 731, 972, 1476, 1788, 2141, 2850, 3495
MslI CAYNNNNRTG 6 cut(s) 635, 1074, 1574, 1748, 2883, 3144
Msp20I TGGCCA 2 cut(s) 264, 2148
MspI CCGG 6 cut(s) 1413, 2173, 2762, 2826, 3228, 3629
MspR9I CCNGG 9 cut(s) 438, 501, 849, 916, 1649, 2566, 2826, 3228, 3563
MunI CAATTG 1 cut(s) 1521
Mva1269I GAATGC 3 cut(s) 499, 613, 2164
MvaI CCWGG 7 cut(s) 438, 501, 849, 916, 1649, 2566, 3563
MvnI CGCG 1 cut(s) 338
NciI CCSGG 2 cut(s) 2826, 3228
NcoI CCATGG 2 cut(s) 1092, 3595
NheI GCTAGC 2 cut(s) 332, 1207
NmeAIII GCCGAG 1 cut(s) 839
NmuCI GTSAC 7 cut(s) 396, 523, 563, 2061, 2253, 2710, 3485
NsiI ATGCAT 4 cut(s) 199, 939, 1581, 2086
NspI RCATGY 2 cut(s) 937, 2761
NspV TTCGAA 2 cut(s) 3319, 3572
PaeI GCATGC 1 cut(s) 937
PaeR7I CTCGAG 1 cut(s) 1278
PagI TCATGA 5 cut(s) 319, 886, 1654, 2878, 2884
PceI AGGCCT 1 cut(s) 436
PctI GAATGC 3 cut(s) 499, 613, 2164
PdmI GAANNNNTTC 3 cut(s) 144, 806, 2214
PfeI GAWTC 9 cut(s) 712, 1175, 1382, 1505, 2126, 2489, 2561, 2922, 2986
PflMI CCANNNNNTGG 3 cut(s) 437, 854, 3242
PfoI TCCNGGA 1 cut(s) 2564
PleI GAGTC 8 cut(s) 568, 622, 1139, 1849, 1885, 2961, 3370, 3566
PpsI GAGTC 8 cut(s) 568, 622, 1139, 1849, 1885, 2961, 3370, 3566
PpuMI RGGWCCY 2 cut(s) 920, 3509
PshAI GACNNNNGTC 1 cut(s) 705
Psp5II RGGWCCY 2 cut(s) 920, 3509
Psp6I CCWGG 7 cut(s) 436, 499, 847, 914, 1647, 2564, 3561
PspFI CCCAGC 2 cut(s) 993, 1438
PspGI CCWGG 7 cut(s) 436, 499, 847, 914, 1647, 2564, 3561
PspPI GGNCC 7 cut(s) 344, 920, 2495, 3077, 3245, 3470, 3509
PspPPI RGGWCCY 2 cut(s) 920, 3509
PspXI VCTCGAGB 1 cut(s) 1278
PsrI GAACNNNNNNTAC 2 cut(s) 2805, 2837
PstI CTGCAG 2 cut(s) 511, 2536
PstNI CAGNNNCTG 3 cut(s) 2492, 2792, 2945
PsuI RGATCY 3 cut(s) 127, 1115, 2044
RsaI GTAC 6 cut(s) 205, 1222, 1309, 1837, 2028, 3458
RsaNI GTAC 6 cut(s) 204, 1221, 1308, 1836, 2027, 3457
RseI CAYNNNNRTG 6 cut(s) 635, 1074, 1574, 1748, 2883, 3144
SaqAI TTAA 7 cut(s) 731, 972, 1476, 1788, 2141, 2850, 3495
Sau96I GGNCC 7 cut(s) 344, 920, 2495, 3077, 3245, 3470, 3509
ScaI AGTACT 1 cut(s) 1837
SchI GAGTC 8 cut(s) 568, 623, 1139, 1850, 1886, 2962, 3371, 3567
ScrFI CCNGG 9 cut(s) 438, 501, 849, 916, 1649, 2566, 2826, 3228, 3563
SduI GDGCHC 4 cut(s) 158, 1569, 2245, 3526
SexAI ACCWGGT 1 cut(s) 847
SfcI CTRYAG 6 cut(s) 507, 2004, 2394, 2445, 2532, 2902
Sfr274I CTCGAG 1 cut(s) 1278
SfuI TTCGAA 2 cut(s) 3319, 3572
SinI GGWCC 6 cut(s) 344, 920, 2495, 3077, 3245, 3509
SlaI CTCGAG 1 cut(s) 1278
SmiMI CAYNNNNRTG 6 cut(s) 635, 1074, 1574, 1748, 2883, 3144
SmlI CTYRAG 7 cut(s) 618, 1278, 1311, 1669, 1874, 2130, 2502
SmoI CTYRAG 7 cut(s) 618, 1278, 1311, 1669, 1874, 2130, 2502
SpeI ACTAGT 1 cut(s) 1745
SphI GCATGC 1 cut(s) 937
SseBI AGGCCT 1 cut(s) 436
SsiI CCGC 4 cut(s) 1252, 2251, 2366, 3601
StuI AGGCCT 1 cut(s) 436
StyD4I CCNGG 9 cut(s) 436, 499, 847, 914, 1647, 2564, 2824, 3226, 3561
StyI CCWWGG 7 cut(s) 150, 431, 1008, 1092, 2180, 3082, 3595
TaiI ACGT 9 cut(s) 8, 398, 530, 1138, 1222, 1309, 3007, 3226, 3580
TatI WGTACW 1 cut(s) 1835
TauI GCSGC 1 cut(s) 3604
TfiI GAWTC 9 cut(s) 712, 1175, 1382, 1505, 2126, 2489, 2561, 2922, 2986
Tru1I TTAA 7 cut(s) 731, 972, 1476, 1788, 2141, 2850, 3495
Tru9I TTAA 7 cut(s) 731, 972, 1476, 1788, 2141, 2850, 3495
TseFI GTSAC 7 cut(s) 396, 523, 563, 2061, 2253, 2710, 3485
Tsp45I GTSAC 7 cut(s) 396, 523, 563, 2061, 2253, 2710, 3485
TspDTI ATGAA 9 cut(s) 336, 555, 858, 903, 1058, 1214, 1564, 1932, 2781
Van91I CCANNNNNTGG 3 cut(s) 437, 854, 3242
VpaK11BI GGWCC 6 cut(s) 344, 920, 2495, 3077, 3245, 3509
XagI CCTNNNNNAGG 3 cut(s) 2074, 2502, 3516
XceI RCATGY 2 cut(s) 937, 2761
XcmI CCANNNNNNNNNTGG 1 cut(s) 3127
XhoI CTCGAG 1 cut(s) 1278
XmaJI CCTAGG 1 cut(s) 2180
XmnI GAANNNNTTC 3 cut(s) 144, 806, 2214
ZraI GACGTC 4 cut(s) 6, 396, 528, 3224
ZrmI AGTACT 1 cut(s) 1837
Zsp2I ATGCAT 4 cut(s) 199, 939, 1581, 2086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.