Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000175.1

Orthogroup ID

OG0013489

Physical Location & Seq

Genomic Coordinates Reverse (-)

56145 .. 62884

Gene Structure 6740 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

atggctgcgggcgtcaagataggaaccgccatcggcaacggcaccggcaccgttccgagtcaccgagtcaccatgtccgcagctctccctctccctcacactctcttcttcctccgtacactcccctcccgcccacgcgccctccgctccactcgctcccactctctccccctccgagcttcctcctccgactctcctccagcttcttcttcttcttcttctccagggcgagaggtggagaatgtggtgattatcgggtcagggccggcgggattcacagcggcaatctacgcagctcgagcgaatttgaagcctctggtgtttgagggataccaggcgggtccgggtggacagttgatgacgactactgaagtcgagaacttccctgggttccctgaaggaatcactggtcctgatttgatggacaggatgcggcggcaggcggagcggtggggagcagagttgtaccaggaagatgttgagtctattgacgtcagaactaggccctttactgtccaaagcagtgaccgtaaggttaagtgcaacagtctaatttttgccacaggggctactgcaagacgtctcaggataccccgtgaagatgaattttggagtaggggaattagtgcttgtgcaatatgtgatggagcatcaccactgtttaaaggccaagtgcttgctgttgtaggagggggtgatacagccacagaggaagctttgtaccttaccaaatatgctcgacatgttcacttacttgtacgtagagatcaaatgagggcttctagagccatgcaagatagagtgtacaacaacccaaatattaccgtgcacttcaacacagagactgtggacattgttagcaatacaaagggccagatgtctggagtattaattcggaaccttgatactaaggaggaatctgtgattgaagcaaaggggttattttatggtataggccattcaccaaatagccaattgttggaaggtcaggttgagcttgacagttctggctatgtcttagtagaggagggtacttcaaagacttcagttgaaggtgtatttgctgctggagatgtacaggatcatgaatggaggcaagctgtaactgctgcaggttctggatgcattgctgcattatcagttgagagatatcttgtgggcaaaaatctcattattgagtttcaccagccccaaactgaagaggctaagaaggaactcacagacagggatgttcaagaacattttgacattacaattacaaagcataagggccagtatgccctgcgaaaattgtaccatgaaagtccaaggcttatatgtgtactatatacagcaccaacatgtggtccatgcaggacattgaaaccaatccttagtaaggtgatagatgactttgacaaaaatgtacatttcgttgaaattgatattgaggaagatcaagaaatagctgaggctgccggaattatgggtacaccatgtgttcagtttttcaaaaacaaggagatgatcagaactctatcgggggtcaagatgaagagcgagtatagagatttcattgaagcaaataaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006109 GO:0008047 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009889 GO:0009987 GO:0010380 GO:0010556 GO:0010581 GO:0010675 GO:0010962 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0016999 GO:0017001 GO:0017144 GO:0019222 GO:0019725 GO:0030234 GO:0031323 GO:0031326 GO:0032881 GO:0032885 GO:0042221 GO:0042592 GO:0042737 GO:0042743 GO:0042744 GO:0042802 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044093 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051186 GO:0051187 GO:0051193 GO:0051716 GO:0055114 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070887 GO:0072593 GO:0080090 GO:0090056 GO:0097237 GO:0098754 GO:0098772 GO:0098869 GO:1901401 GO:1901463 GO:1990748 GO:2000112 GO:2000904

KEGG Pathways

Metabolic & Signaling

ko00450 map00450

Pfam Domains

Protein Families

Pyr_redox_2 Thioredoxin

Protein Analysis

523

Amino Acids

57.41

Weight (kDa)

6.39

Isoelectric Point (pI)

45.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	81 - 374	1.3e-50	Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_2	PF00890	82 - 313	6.4e-06	FAD binding domain
Pyr_redox_3	PF13738	156 - 357	5e-17	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	226 - 299	3.2e-14	Pyridine nucleotide-disulphide oxidoreductase
Thioredoxin	PF00085	435 - 520	5.8e-16	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013489)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41680
fragaria_vesca	FvH4_6g24270 FvH4_6g24270 FvH4_6g24270
malus_domestica	MD00G1191800.v1.1 MD12G1076500.v1.1
prunus_persica	Prupe.7G056500_v2.0.a1
pyrus_communis	pycom12g06610
rosa_chinensis	RchiOBHm_Chr3g0482921
rosa_laevigata	RLG00000023317
rosa_multiflora	Rmu_ssc0000175.1_g000017
rosa_roxburghii	Rroxscaffold_6G00398840
rosa_rugosa	Rorug03G0202100
rosa_samantha	Rh3BG287500 Rh3BG287600 Rh3CG284900 Rh3DG280600
rosa_wichuraiana	Rw3G022630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	495, 583
Acc36I	ACCTGC	1 cut(s)	1103
AccB1I	GGYRCC	2 cut(s)	41, 47
AccB7I	CCANNNNNTGG	2 cut(s)	979, 1343
AccBSI	CCGCTC	2 cut(s)	147, 448
AccII	CGCG	1 cut(s)	138
AclWI	GGATC	1 cut(s)	1089
AcsI	RAATTY	2 cut(s)	304, 605
AcuI	CTGAAG	4 cut(s)	390, 417, 1029, 1218
AcyI	GRCGYC	3 cut(s)	12, 492, 580
AdeI	CACNNNGTG	1 cut(s)	1478
AfiI	CCNNNNNNNGG	3 cut(s)	979, 1343, 1378
AflIII	ACRYGT	2 cut(s)	742, 1340
AjnI	CCWGG	4 cut(s)	223, 333, 385, 468
AluBI	AGCT	8 cut(s)	83, 179, 203, 296, 716, 997, 1100, 1448
AluI	AGCT	8 cut(s)	83, 179, 203, 296, 716, 997, 1100, 1448
Alw21I	GWGCWC	1 cut(s)	831
Alw26I	GTCTC	2 cut(s)	587, 836
Alw44I	GTGCAC	1 cut(s)	827
AlwI	GGATC	1 cut(s)	1089
AlwNI	CAGNNNCTG	2 cut(s)	845, 1118
Ama87I	CYCGRG	1 cut(s)	297
AoxI	GGCC	6 cut(s)	263, 503, 667, 871, 955, 1270
ApaLI	GTGCAC	1 cut(s)	827
ApeKI	GCWGC	7 cut(s)	5, 80, 293, 1064, 1109, 1130, 1454
ApoI	RAATTY	2 cut(s)	304, 605
AseI	ATTAAT	1 cut(s)	890
AspLEI	GCGC	1 cut(s)	140
AspS9I	GGNCC	7 cut(s)	263, 341, 410, 504, 871, 1270, 1346
AsuC2I	CCSGG	1 cut(s)	345
AsuHPI	GGTGA	8 cut(s)	53, 61, 259, 645, 707, 954, 1175, 1393
AvaI	CYCGRG	1 cut(s)	297
AvaII	GGWCC	3 cut(s)	341, 410, 1346
BaeGI	GKGCMC	1 cut(s)	831
BanI	GGYRCC	2 cut(s)	41, 47
Bbv12I	GWGCWC	1 cut(s)	831
BbvCI	CCTCAGC	1 cut(s)	1449
BbvI	GCAGC	6 cut(s)	92, 305, 1051, 1096, 1117, 1441
BccI	CCATC	3 cut(s)	38, 415, 638
BceAI	ACGGC	1 cut(s)	55
BciT130I	CCWGG	4 cut(s)	225, 335, 387, 470
BciVI	GTATCC	2 cut(s)	323, 582
BclI	TGATCA	1 cut(s)	1506
BcnI	CCSGG	1 cut(s)	345
BcoDI	GTCTC	2 cut(s)	587, 836
BfaI	CTAG	2 cut(s)	501, 783
BfmI	CTRYAG	1 cut(s)	1110
BfuAI	ACCTGC	1 cut(s)	1103
BfuI	GTATCC	2 cut(s)	323, 582
BglI	GCCNNNNNGGC	1 cut(s)	566
Bme1390I	CCNGG	5 cut(s)	225, 335, 345, 387, 470
Bme18I	GGWCC	3 cut(s)	341, 410, 1346
BmeT110I	CYCGRG	1 cut(s)	297
BmgT120I	GGNCC	7 cut(s)	263, 341, 410, 504, 871, 1270, 1346
BmiI	GGNNCC	6 cut(s)	25, 43, 49, 342, 392, 899
BmrFI	CCNGG	5 cut(s)	225, 335, 345, 387, 470
BmsI	GCATC	3 cut(s)	420, 659, 1112
BpmI	CTGGAG	4 cut(s)	183, 207, 903, 1089
Bpu10I	CCTNAGC	1 cut(s)	1449
BpuMI	CCSGG	1 cut(s)	345
BsaAI	YACGTR	1 cut(s)	761
BsaHI	GRCGYC	3 cut(s)	12, 492, 580
BsaJI	CCNNGG	4 cut(s)	224, 385, 386, 1307
BsaXI	ACNNNNNCTCC	2 cut(s)	126, 156
Bsc4I	CCNNNNNNNGG	3 cut(s)	979, 1343, 1378
Bse118I	RCCGGY	2 cut(s)	44, 265
Bse1I	ACTGG	2 cut(s)	412, 1273
Bse3DI	GCAATG	1 cut(s)	1125
BseBI	CCWGG	4 cut(s)	225, 335, 387, 470
BseDI	CCNNGG	4 cut(s)	224, 385, 386, 1307
BseGI	GGATG	3 cut(s)	435, 1127, 1234
BseLI	CCNNNNNNNGG	3 cut(s)	979, 1343, 1378
BseMI	GCAATG	1 cut(s)	1125
BseMII	CTCAG	2 cut(s)	598, 1440
BseNI	ACTGG	2 cut(s)	412, 1273
BseRI	GAGGAG	3 cut(s)	175, 186, 1040
BseSI	GKGCMC	1 cut(s)	831
BseXI	GCAGC	6 cut(s)	92, 305, 1051, 1096, 1117, 1441
Bsh1236I	CGCG	1 cut(s)	138
BshFI	GGCC	6 cut(s)	265, 505, 669, 873, 957, 1272
BshNI	GGYRCC	2 cut(s)	41, 47
BsiHKAI	GWGCWC	1 cut(s)	831
BsiHKCI	CYCGRG	1 cut(s)	297
BsiSI	CCGG	4 cut(s)	45, 266, 344, 1458
BslI	CCNNNNNNNGG	3 cut(s)	979, 1343, 1378
BsmAI	GTCTC	2 cut(s)	587, 836
BsmBI	CGTCTC	1 cut(s)	587
BsnI	GGCC	6 cut(s)	265, 505, 669, 873, 957, 1272
BsoBI	CYCGRG	1 cut(s)	297
Bsp1286I	GDGCHC	1 cut(s)	831
Bsp1407I	TGTACA	3 cut(s)	804, 1075, 1405
Bsp143I	GATC	4 cut(s)	766, 1081, 1435, 1506
BspANI	GGCC	6 cut(s)	265, 505, 669, 873, 957, 1272
BspCNI	CTCAG	2 cut(s)	597, 1441
BspFNI	CGCG	1 cut(s)	138
BspHI	TCATGA	1 cut(s)	1084
BspLI	GGNNCC	6 cut(s)	25, 43, 49, 342, 392, 899
BspMAI	CTGCAG	1 cut(s)	1114
BspMI	ACCTGC	1 cut(s)	1103
BspPI	GGATC	1 cut(s)	1089
BspQI	GCTCTTC	1 cut(s)	1529
BspT107I	GGYRCC	2 cut(s)	41, 47
BsrBI	CCGCTC	2 cut(s)	147, 448
BsrDI	GCAATG	1 cut(s)	1125
BsrFI	RCCGGY	2 cut(s)	44, 265
BsrGI	TGTACA	3 cut(s)	804, 1075, 1405
BsrI	ACTGG	2 cut(s)	412, 1273
BssAI	RCCGGY	2 cut(s)	44, 265
BssECI	CCNNGG	4 cut(s)	224, 385, 386, 1307
BssMI	GATC	4 cut(s)	766, 1081, 1435, 1506
BssNI	GRCGYC	3 cut(s)	12, 492, 580
BssT1I	CCWWGG	1 cut(s)	1307
Bst2UI	CCWGG	4 cut(s)	225, 335, 387, 470
Bst4CI	ACNGT	9 cut(s)	52, 354, 514, 530, 548, 660, 826, 847, 1004
Bst6I	CTCTTC	3 cut(s)	110, 1194, 1529
BstACI	GRCGYC	3 cut(s)	12, 492, 580
BstAUI	TGTACA	3 cut(s)	804, 1075, 1405
BstBAI	YACGTR	1 cut(s)	761
BstC8I	GCNNGC	5 cut(s)	10, 267, 441, 678, 1098
BstDEI	CTNAG	6 cut(s)	584, 909, 1018, 1206, 1373, 1449
BstENI	CCTNNNNNAGG	1 cut(s)	1376
BstF5I	GGATG	3 cut(s)	435, 1127, 1234
BstFNI	CGCG	1 cut(s)	138
BstHHI	GCGC	1 cut(s)	140
BstKTI	GATC	4 cut(s)	769, 1084, 1438, 1509
BstMAI	GTCTC	2 cut(s)	587, 836
BstMBI	GATC	4 cut(s)	766, 1081, 1435, 1506
BstMWI	GCNNNNNNNGC	9 cut(s)	144, 153, 290, 299, 445, 566, 785, 1106, 1454
BstNI	CCWGG	4 cut(s)	225, 335, 387, 470
BstNSI	RCATGY	2 cut(s)	746, 1344
BstSCI	CCNGG	5 cut(s)	223, 333, 343, 385, 468
BstSFI	CTRYAG	1 cut(s)	1110
BstSLI	GKGCMC	1 cut(s)	831
BstSNI	TACGTA	1 cut(s)	761
BstUI	CGCG	1 cut(s)	138
BstV1I	GCAGC	6 cut(s)	92, 305, 1051, 1096, 1117, 1441
BstXI	CCANNNNNNTGG	1 cut(s)	881
BsuI	GTATCC	2 cut(s)	323, 582
BsuRI	GGCC	6 cut(s)	265, 505, 669, 873, 957, 1272
BtsCI	GGATG	3 cut(s)	435, 1127, 1234
BtsI	GCAGTG	1 cut(s)	529
BtsIMutI	CAGTG	3 cut(s)	405, 529, 656
BveI	ACCTGC	1 cut(s)	1103
Cac8I	GCNNGC	5 cut(s)	10, 267, 441, 678, 1098
CaiI	CAGNNNCTG	2 cut(s)	845, 1118
CciI	TCATGA	1 cut(s)	1084
CfoI	GCGC	1 cut(s)	140
Cfr10I	RCCGGY	2 cut(s)	44, 265
Cfr13I	GGNCC	7 cut(s)	263, 341, 410, 504, 871, 1270, 1346
CviAII	CATG	8 cut(s)	73, 743, 790, 1085, 1298, 1341, 1350, 1476
DdeI	CTNAG	6 cut(s)	584, 909, 1018, 1206, 1373, 1449
DpnI	GATC	4 cut(s)	768, 1083, 1437, 1508
DpnII	GATC	4 cut(s)	766, 1081, 1435, 1506
DraI	TTTAAA	1 cut(s)	664
DraIII	CACNNNGTG	1 cut(s)	1478
Eam1104I	CTCTTC	3 cut(s)	110, 1194, 1529
EarI	CTCTTC	3 cut(s)	110, 1194, 1529
EciI	GGCGGA	1 cut(s)	458
Eco105I	TACGTA	1 cut(s)	761
Eco130I	CCWWGG	1 cut(s)	1307
Eco32I	GATATC	1 cut(s)	1151
Eco47I	GGWCC	3 cut(s)	341, 410, 1346
Eco57I	CTGAAG	4 cut(s)	390, 417, 1029, 1218
Eco88I	CYCGRG	1 cut(s)	297
EcoNI	CCTNNNNNAGG	1 cut(s)	1376
EcoO109I	RGGNCCY	1 cut(s)	504
EcoRII	CCWGG	4 cut(s)	223, 333, 385, 468
EcoRV	GATATC	1 cut(s)	1151
EcoT14I	CCWWGG	1 cut(s)	1307
EcoT22I	ATGCAT	1 cut(s)	1127
ErhI	CCWWGG	1 cut(s)	1307
Esp3I	CGTCTC	1 cut(s)	587
FaeI	CATG	8 cut(s)	76, 746, 793, 1088, 1301, 1344, 1353, 1479
FatI	CATG	8 cut(s)	72, 742, 789, 1084, 1297, 1340, 1349, 1475
FauI	CCCGC	3 cut(s)	137, 262, 331
FbaI	TGATCA	1 cut(s)	1506
FokI	GGATG	3 cut(s)	442, 1134, 1241
FspBI	CTAG	2 cut(s)	501, 783
GlaI	GCGC	1 cut(s)	139
GsuI	CTGGAG	4 cut(s)	183, 207, 903, 1089
HaeIII	GGCC	6 cut(s)	265, 505, 669, 873, 957, 1272
HapII	CCGG	4 cut(s)	45, 266, 344, 1458
HhaI	GCGC	1 cut(s)	140
Hin1I	GRCGYC	3 cut(s)	12, 492, 580
Hin1II	CATG	8 cut(s)	76, 746, 793, 1088, 1301, 1344, 1353, 1479
Hin6I	GCGC	1 cut(s)	138
HinP1I	GCGC	1 cut(s)	138
HindIII	AAGCTT	1 cut(s)	714
HinfI	GANTC	7 cut(s)	58, 66, 191, 273, 402, 482, 917
HpaII	CCGG	4 cut(s)	45, 266, 344, 1458
HphI	GGTGA	8 cut(s)	53, 61, 259, 645, 707, 954, 1175, 1393
Hpy166II	GTNNAC	8 cut(s)	119, 350, 748, 805, 829, 850, 1322, 1472
Hpy188I	TCNGA	6 cut(s)	57, 176, 190, 497, 897, 1511
Hpy8I	GTNNAC	8 cut(s)	119, 350, 748, 805, 829, 850, 1322, 1472
HpyAV	CCTTC	4 cut(s)	392, 977, 1046, 1204
HpyCH4III	ACNGT	9 cut(s)	52, 354, 514, 530, 548, 660, 826, 847, 1004
HpyCH4IV	ACGT	3 cut(s)	492, 580, 760
HpyCH4V	TGCA	9 cut(s)	543, 575, 635, 793, 829, 1112, 1125, 1133, 1353
HpyF10VI	GCNNNNNNNGC	9 cut(s)	144, 153, 290, 299, 445, 566, 785, 1106, 1454
HpyF3I	CTNAG	6 cut(s)	584, 909, 1018, 1206, 1373, 1449
HpySE526I	ACGT	3 cut(s)	492, 580, 760
Hsp92I	GRCGYC	3 cut(s)	12, 492, 580
Hsp92II	CATG	8 cut(s)	76, 746, 793, 1088, 1301, 1344, 1353, 1479
HspAI	GCGC	1 cut(s)	138
KroI	GCCGGC	1 cut(s)	265
KroNI	GCCGGC	1 cut(s)	267
Ksp22I	TGATCA	1 cut(s)	1506
Kzo9I	GATC	4 cut(s)	766, 1081, 1435, 1506
LguI	GCTCTTC	1 cut(s)	1529
LmnI	GCTCC	5 cut(s)	152, 161, 445, 455, 647
Lsp1109I	GCAGC	6 cut(s)	92, 305, 1051, 1096, 1117, 1441
LweI	GCATC	3 cut(s)	420, 659, 1112
MaeI	CTAG	2 cut(s)	501, 783
MaeII	ACGT	3 cut(s)	492, 580, 760
MaeIII	GTNAC	4 cut(s)	59, 67, 524, 1102
MalI	GATC	4 cut(s)	768, 1083, 1437, 1508
MbiI	CCGCTC	2 cut(s)	147, 448
MboI	GATC	4 cut(s)	766, 1081, 1435, 1506
MfeI	CAATTG	1 cut(s)	974
MhlI	GDGCHC	1 cut(s)	831
MlyI	GAGTC	4 cut(s)	67, 75, 185, 491
MmeI	TCCRAC	2 cut(s)	213, 960
Mph1103I	ATGCAT	1 cut(s)	1127
MroNI	GCCGGC	1 cut(s)	265
MseI	TTAA	3 cut(s)	537, 663, 890
MslI	CAYNNNNRTG	1 cut(s)	1339
MspA1I	CMGCKG	1 cut(s)	281
MspI	CCGG	4 cut(s)	45, 266, 344, 1458
MspR9I	CCNGG	5 cut(s)	225, 335, 345, 387, 470
MunI	CAATTG	1 cut(s)	974
MvaI	CCWGG	4 cut(s)	225, 335, 387, 470
MvnI	CGCG	1 cut(s)	138
MwoI	GCNNNNNNNGC	9 cut(s)	144, 153, 290, 299, 445, 566, 785, 1106, 1454
NaeI	GCCGGC	1 cut(s)	267
NciI	CCSGG	1 cut(s)	345
NdeII	GATC	4 cut(s)	766, 1081, 1435, 1506
NgoMIV	GCCGGC	1 cut(s)	265
NlaIII	CATG	8 cut(s)	76, 746, 793, 1088, 1301, 1344, 1353, 1479
NlaIV	GGNNCC	6 cut(s)	25, 43, 49, 342, 392, 899
NmuCI	GTSAC	3 cut(s)	59, 67, 524
NsiI	ATGCAT	1 cut(s)	1127
NspI	RCATGY	2 cut(s)	746, 1344
PaeR7I	CTCGAG	1 cut(s)	297
PagI	TCATGA	1 cut(s)	1084
PasI	CCCWGGG	1 cut(s)	386
PciI	ACATGT	2 cut(s)	742, 1340
PciSI	GCTCTTC	1 cut(s)	1529
PdiI	GCCGGC	1 cut(s)	267
PfeI	GAWTC	3 cut(s)	273, 402, 917
PflMI	CCANNNNNTGG	2 cut(s)	979, 1343
PleI	GAGTC	4 cut(s)	66, 74, 185, 490
PpsI	GAGTC	4 cut(s)	66, 74, 185, 490
Ppu21I	YACGTR	1 cut(s)	761
PscI	ACATGT	2 cut(s)	742, 1340
PshBI	ATTAAT	1 cut(s)	890
Psp6I	CCWGG	4 cut(s)	223, 333, 385, 468
PspGI	CCWGG	4 cut(s)	223, 333, 385, 468
PspN4I	GGNNCC	6 cut(s)	25, 43, 49, 342, 392, 899
PspPI	GGNCC	7 cut(s)	263, 341, 410, 504, 871, 1270, 1346
PspXI	VCTCGAGB	1 cut(s)	297
PstI	CTGCAG	1 cut(s)	1114
PstNI	CAGNNNCTG	2 cut(s)	845, 1118
RseI	CAYNNNNRTG	1 cut(s)	1339
SapI	GCTCTTC	1 cut(s)	1529
SaqAI	TTAA	3 cut(s)	537, 663, 890
Sau3AI	GATC	4 cut(s)	766, 1081, 1435, 1506
Sau96I	GGNCC	7 cut(s)	263, 341, 410, 504, 871, 1270, 1346
SchI	GAGTC	4 cut(s)	67, 75, 185, 491
ScrFI	CCNGG	5 cut(s)	225, 335, 345, 387, 470
SduI	GDGCHC	1 cut(s)	831
SfaNI	GCATC	3 cut(s)	420, 659, 1112
SfcI	CTRYAG	1 cut(s)	1110
Sfr274I	CTCGAG	1 cut(s)	297
SinI	GGWCC	3 cut(s)	341, 410, 1346
SlaI	CTCGAG	1 cut(s)	297
SmiMI	CAYNNNNRTG	1 cut(s)	1339
SmlI	CTYRAG	1 cut(s)	297
SmoI	CTYRAG	1 cut(s)	297
SnaBI	TACGTA	1 cut(s)	761
SspI	AATATT	1 cut(s)	820
SspMI	CTAG	2 cut(s)	501, 783
StyD4I	CCNGG	5 cut(s)	223, 333, 343, 385, 468
StyI	CCWWGG	1 cut(s)	1307
TaaI	ACNGT	9 cut(s)	52, 354, 514, 530, 548, 660, 826, 847, 1004
TaiI	ACGT	3 cut(s)	495, 583, 763
TaqI	TCGA	3 cut(s)	298, 375, 739
TatI	WGTACW	4 cut(s)	804, 1075, 1321, 1405
TauI	GCSGC	3 cut(s)	284, 436, 439
TfiI	GAWTC	3 cut(s)	273, 402, 917
Tru1I	TTAA	3 cut(s)	537, 663, 890
Tru9I	TTAA	3 cut(s)	537, 663, 890
TscAI	CASTG	3 cut(s)	412, 529, 663
TseFI	GTSAC	3 cut(s)	59, 67, 524
TseI	GCWGC	7 cut(s)	5, 80, 293, 1064, 1109, 1130, 1454
Tsp45I	GTSAC	3 cut(s)	59, 67, 524
TspDTI	ATGAA	5 cut(s)	618, 1101, 1314, 1543, 1547
TspGWI	ACGGA	1 cut(s)	104
TspRI	CASTG	3 cut(s)	412, 529, 663
Van91I	CCANNNNNTGG	2 cut(s)	979, 1343
VneI	GTGCAC	1 cut(s)	827
VpaK11BI	GGWCC	3 cut(s)	341, 410, 1346
VspI	ATTAAT	1 cut(s)	890
XagI	CCTNNNNNAGG	1 cut(s)	1376
XapI	RAATTY	2 cut(s)	304, 605
XbaI	TCTAGA	1 cut(s)	782
XceI	RCATGY	2 cut(s)	746, 1344
XhoI	CTCGAG	1 cut(s)	297
XspI	CTAG	2 cut(s)	501, 783
ZraI	GACGTC	2 cut(s)	493, 581
Zsp2I	ATGCAT	1 cut(s)	1127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.