Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000204.1

Orthogroup ID

OG0015839

Physical Location & Seq

Genomic Coordinates Reverse (-)

76063 .. 79152

Gene Structure 3090 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

atgaagaagaagaagaagagagcgaggtttcagagaagccagcacgaaggagaagaggaggaggaggaggttcagaacttcgggaagagactgaaatgcagcaaatacgaggaggttcgagacgaatatgaagaagaagaagaagaagagagcgaggtttcagagaagagagagatgcttagcatgtacccaatgactcccacatcgtttgtggtctccgatgctctggaacccgattgtccgatcatttacgtcaacaaagtgttcgagacgttcaccggatatggagctcatgaagtcctcggtcggaactgtcggttcttacaatatagagaccctcatgctcaaagacgacatcctctggtagatcctgatgtcgtttctgagattagaaggtgtcttgaagaaggagttgaattcttaggtgagcttcttaatttcagtaaggatggcactcccttggtgaataggctaaggctgaagcctatacttgatgataacggaactgtcacacacatcataggcattcaagtatttgctgaaacaaaaatagatctcaatagtgtgtcatatccagtttataaagagacatgcactgagcagtacactcagcccgataaatattctctcaccagtggacaaacaccttcgacccaacatcaagaaatttgtgggattctgcagctctcggatgaagtcttggctcacaacatcttatcgcgcttgactccaagggatgtggcatccattgggtctgtctgcagaagaatccgtcagctaacgaaaaatgagcatgtgaggaagatggtatgtcagaatgcatggggaagagaagtcactggtacattggaactgatgactaagaagttagggtgggggcgtctggctagggaactgacaactcttgaggctgtttgttggaggaagtttactgttggaggttccgtggagccttcacggtgcaatttcagtgcttgtgctgtgggaaatcgattagtactgtttggaggtgaaggagtggatatgcagccaatggatgacacatttgttctcaatcttgatgctgccaatccagagtggactagagtaagtgtgaaatcatcaccaccaggtcggtggggccatacactttcatgtttgaatggttctttgctagtagtttttggaggatgtgggcggcaagggttgctcaatgatgtttgggttcttgacttggatgccaagcagccaacatggaaagaagtttatggtggaactcctcctctccctagatcctggcatagctcttgcataacagaaggttctaaattagttgtgtcaggtggatgcacagatgctggggtacttcttagcgacacatacgtattggatctcaccactgacaatccaacatggagagagattccaacttcatggtctcctccctctaggttgggacattccctttcagtttatggccggtcaaagattctcatgtttggtggacttgccaacagtgggcacttgcggttaagatcaggtgagacttacaccattgatttggaagacgaagagcctcaatggaggcaactggagtgtaatgcatttaccagcattgacagccagagtgcggtgctccctcctcctagacttgatcatgttgctgtgagcatgccttgtggaaggattatcatttttggtggttcaattgccgggctgcattctccttctcagcttttcctcttggatccttctgaagagaaaccatcatggagaattttgaacgttcccgggcaaccacctaaatttgcttggggtcacagcacctgcgtggtcggagggacaagggtcctggtactgggtggccacacaggtgaggagtggatactcaatgacttgcatgagttgtgcttagcaagcaggcaggattcagacctatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

F-box Kelch_2 Kelch_4 PAS_9

Protein Analysis

639

Amino Acids

71.52

Weight (kDa)

5.57

Isoelectric Point (pI)

48.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAS_9	PF13426	76 - 177	7.6e-16	PAS domain
PAS_3	PF08447	82 - 176	8.7e-07	PAS fold
PAS	PF00989	82 - 176	1.5e-06	PAS fold
Kelch_KLHDC2_KLHL20_DRC7	PF24681	301 - 495	1.9e-40	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	306 - 461	4.1e-26	FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1	PF24981	307 - 442	3.4e-10	Attractin/LZTR1 beta-propeller
Beta-prop_TYW4	PF13418	319 - 562	2.2e-12	tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1	PF24981	334 - 524	2.3e-17	Attractin/LZTR1 beta-propeller
Kelch_HCF	PF13854	358 - 616	7e-18	Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	410 - 528	3.9e-17	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	489 - 634	2.9e-15	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	530 - 633	5.8e-12	FBX42, beta-propeller domain
Kelch_2	PF07646	544 - 591	1.7e-07	Kelch motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68050
fragaria_vesca	FvH4_4g33490
malus_domestica	MD16G1018000.v1.1
prunus_persica	Prupe.1G334000_v2.0.a1
pyrus_communis	pycom16g01630
rosa_chinensis	RchiOBHm_Chr4g0442801
rosa_laevigata	RLG00000005983
rosa_multiflora	Rmu_ssc0000204.1_g000019
rosa_roxburghii	Rroxscaffold_5G00383580
rosa_rugosa	Rorug04G0343300
rosa_samantha	Rh4AG395800 Rh4BG408700 Rh4CG424300 Rh4DG402800
rosa_wichuraiana	Rw4G034210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	582
AarI	CACCTGC	1 cut(s)	1814
Acc36I	ACCTGC	1 cut(s)	1814
AccII	CGCG	1 cut(s)	721
AciI	CCGC	3 cut(s)	1177, 1507, 1610
AclI	AACGTT	1 cut(s)	1764
AclWI	GGATC	5 cut(s)	362, 1266, 1377, 1721, 1734
AcoI	YGGCCR	2 cut(s)	1456, 1843
AcsI	RAATTY	4 cut(s)	416, 666, 1755, 1784
AcuI	CTGAAG	2 cut(s)	500, 1755
AcyI	GRCGYC	1 cut(s)	880
AfaI	GTAC	6 cut(s)	188, 605, 844, 999, 1344, 1836
AfiI	CCNNNNNNNGG	3 cut(s)	1497, 1609, 1837
AgsI	TTSAA	6 cut(s)	404, 416, 530, 1141, 1686, 1762
AjnI	CCWGG	3 cut(s)	1108, 1274, 1830
AleI	CACNNNNGTG	2 cut(s)	1808, 1851
AluBI	AGCT	6 cut(s)	290, 430, 685, 778, 1284, 1714
AluI	AGCT	6 cut(s)	290, 430, 685, 778, 1284, 1714
Alw21I	GWGCWC	2 cut(s)	292, 1617
Alw26I	GTCTC	8 cut(s)	82, 114, 220, 263, 327, 581, 1422, 1517
AlwI	GGATC	5 cut(s)	362, 1266, 1377, 1721, 1734
AlwNI	CAGNNNCTG	2 cut(s)	1337, 1806
Ama87I	CYCGRG	1 cut(s)	1769
AoxI	GGCC	3 cut(s)	1120, 1456, 1843
ApeKI	GCWGC	6 cut(s)	99, 682, 1027, 1064, 1225, 1696
ApoI	RAATTY	4 cut(s)	416, 666, 1755, 1784
AspLEI	GCGC	1 cut(s)	723
AspS9I	GGNCC	2 cut(s)	1120, 1828
AsuC2I	CCSGG	3 cut(s)	1693, 1770, 1771
AsuHPI	GGTGA	9 cut(s)	268, 437, 475, 622, 1022, 1095, 1366, 1532, 1865
AvaI	CYCGRG	1 cut(s)	1769
AvaII	GGWCC	1 cut(s)	1828
BaeGI	GKGCMC	1 cut(s)	1503
BalI	TGGCCA	1 cut(s)	1845
BamHI	GGATCC	1 cut(s)	1726
BanII	GRGCYC	1 cut(s)	292
BbsI	GAAGAC	1 cut(s)	1551
Bbv12I	GWGCWC	2 cut(s)	292, 1617
BbvI	GCAGC	6 cut(s)	111, 694, 1039, 1051, 1237, 1683
BccI	CCATC	3 cut(s)	443, 799, 1753
BciT130I	CCWGG	3 cut(s)	1110, 1276, 1832
BciVI	GTATCC	1 cut(s)	1857
BclI	TGATCA	1 cut(s)	1633
BcnI	CCSGG	3 cut(s)	1693, 1770, 1771
BcoDI	GTCTC	8 cut(s)	82, 114, 220, 263, 327, 581, 1422, 1517
BfaI	CTAG	6 cut(s)	888, 1083, 1154, 1269, 1428, 1626
BfmI	CTRYAG	2 cut(s)	680, 760
BfuAI	ACCTGC	1 cut(s)	1814
BfuI	GTATCC	1 cut(s)	1857
BglII	AGATCT	1 cut(s)	553
BisI	GCNGC	7 cut(s)	100, 683, 1028, 1065, 1178, 1226, 1697
BlpI	GCTNAGC	2 cut(s)	179, 1891
BlsI	GCNGC	7 cut(s)	101, 684, 1029, 1066, 1179, 1227, 1698
BmcAI	AGTACT	1 cut(s)	999
Bme1390I	CCNGG	6 cut(s)	1110, 1276, 1693, 1770, 1771, 1832
Bme18I	GGWCC	1 cut(s)	1828
BmeT110I	CYCGRG	1 cut(s)	1769
BmgT120I	GGNCC	2 cut(s)	1120, 1828
BmiI	GGNNCC	6 cut(s)	231, 943, 951, 1121, 1728, 1829
BmrFI	CCNGG	6 cut(s)	1110, 1276, 1693, 1770, 1771, 1832
BmrI	ACTGGG	1 cut(s)	1847
BmsI	GCATC	7 cut(s)	165, 211, 752, 1051, 1207, 1316, 1324
BmuI	ACTGGG	1 cut(s)	1847
BoxI	GACNNNNGTC	1 cut(s)	1826
BpiI	GAAGAC	1 cut(s)	1551
BpmI	CTGGAG	1 cut(s)	1592
Bpu10I	CCTNAGC	1 cut(s)	473
Bpu1102I	GCTNAGC	2 cut(s)	179, 1891
BpuEI	CTTGAG	1 cut(s)	926
BpuMI	CCSGG	3 cut(s)	1693, 1770, 1771
Bsa29I	ATCGAT	1 cut(s)	991
BsaAI	YACGTR	1 cut(s)	1363
BsaHI	GRCGYC	1 cut(s)	880
BsaI	GGTCTC	3 cut(s)	220, 327, 1422
BsaJI	CCNNGG	5 cut(s)	301, 459, 731, 945, 1769
BsaWI	WCCGGW	1 cut(s)	278
BsaXI	ACNNNNNCTCC	2 cut(s)	930, 960
Bsc4I	CCNNNNNNNGG	3 cut(s)	1497, 1609, 1837
Bse118I	RCCGGY	1 cut(s)	1458
Bse1I	ACTGG	5 cut(s)	575, 633, 844, 1575, 1842
BseBI	CCWGG	3 cut(s)	1110, 1276, 1832
BseCI	ATCGAT	1 cut(s)	991
BseDI	CCNNGG	5 cut(s)	301, 459, 731, 945, 1769
BseGI	GGATG	9 cut(s)	355, 454, 697, 742, 743, 1042, 1175, 1222, 1331
BseLI	CCNNNNNNNGG	3 cut(s)	1497, 1609, 1837
BseMII	CTCAG	4 cut(s)	375, 588, 623, 1724
BseNI	ACTGG	5 cut(s)	575, 633, 844, 1575, 1842
BseSI	GKGCMC	1 cut(s)	1503
BseXI	GCAGC	6 cut(s)	111, 694, 1039, 1051, 1237, 1683
BseYI	CCCAGC	1 cut(s)	1337
Bsh1236I	CGCG	1 cut(s)	721
Bsh1285I	CGRYCG	1 cut(s)	307
BshFI	GGCC	3 cut(s)	1122, 1458, 1845
BshVI	ATCGAT	1 cut(s)	991
BsiEI	CGRYCG	1 cut(s)	307
BsiHKAI	GWGCWC	2 cut(s)	292, 1617
BsiHKCI	CYCGRG	1 cut(s)	1769
BsiSI	CCGG	4 cut(s)	279, 1459, 1692, 1770
BslFI	GGGAC	2 cut(s)	1449, 1834
BslI	CCNNNNNNNGG	3 cut(s)	1497, 1609, 1837
BsmAI	GTCTC	8 cut(s)	82, 114, 220, 263, 327, 581, 1422, 1517
BsmBI	CGTCTC	2 cut(s)	114, 263
BsmFI	GGGAC	2 cut(s)	1449, 1834
BsmI	GAATGC	3 cut(s)	525, 823, 1699
BsnI	GGCC	3 cut(s)	1122, 1458, 1845
Bso31I	GGTCTC	3 cut(s)	220, 327, 1422
BsoBI	CYCGRG	1 cut(s)	1769
Bsp1286I	GDGCHC	3 cut(s)	292, 1503, 1617
Bsp143I	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
Bsp1720I	GCTNAGC	2 cut(s)	179, 1891
BspACI	CCGC	3 cut(s)	1177, 1507, 1610
BspANI	GGCC	3 cut(s)	1122, 1458, 1845
BspCNI	CTCAG	4 cut(s)	376, 589, 622, 1723
BspDI	ATCGAT	1 cut(s)	991
BspFNI	CGCG	1 cut(s)	721
BspHI	TCATGA	1 cut(s)	292
BspLI	GGNNCC	6 cut(s)	231, 943, 951, 1121, 1728, 1829
BspMAI	CTGCAG	2 cut(s)	684, 764
BspMI	ACCTGC	1 cut(s)	1814
BspPI	GGATC	5 cut(s)	362, 1266, 1377, 1721, 1734
BspQI	GCTCTTC	1 cut(s)	1545
BspTNI	GGTCTC	3 cut(s)	220, 327, 1422
BsrFI	RCCGGY	1 cut(s)	1458
BsrI	ACTGG	5 cut(s)	575, 633, 844, 1575, 1842
BssAI	RCCGGY	1 cut(s)	1458
BssECI	CCNNGG	5 cut(s)	301, 459, 731, 945, 1769
BssMI	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
BssNI	GRCGYC	1 cut(s)	880
BssT1I	CCWWGG	2 cut(s)	459, 731
Bst2UI	CCWGG	3 cut(s)	1110, 1276, 1832
Bst4CI	ACNGT	6 cut(s)	314, 508, 934, 960, 1002, 1496
Bst6I	CTCTTC	8 cut(s)	11, 48, 80, 141, 161, 823, 1545, 1731
BstACI	GRCGYC	1 cut(s)	880
BstAPI	GCANNNNNTGC	1 cut(s)	1186
BstBAI	YACGTR	1 cut(s)	1363
BstC8I	GCNNGC	4 cut(s)	41, 1652, 1897, 1901
BstDSI	CCRYGG	1 cut(s)	945
BstF5I	GGATG	9 cut(s)	355, 454, 697, 742, 743, 1042, 1175, 1222, 1331
BstFNI	CGCG	1 cut(s)	721
BstHHI	GCGC	1 cut(s)	723
BstKTI	GATC	8 cut(s)	246, 370, 556, 1274, 1372, 1517, 1636, 1729
BstMAI	GTCTC	8 cut(s)	82, 114, 220, 263, 327, 581, 1422, 1517
BstMBI	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
BstMCI	CGRYCG	1 cut(s)	307
BstMWI	GCNNNNNNNGC	3 cut(s)	1186, 1599, 1896
BstNI	CCWGG	3 cut(s)	1110, 1276, 1832
BstNSI	RCATGY	4 cut(s)	187, 594, 797, 1654
BstPAI	GACNNNNGTC	1 cut(s)	1826
BstSCI	CCNGG	6 cut(s)	1108, 1274, 1691, 1768, 1769, 1830
BstSFI	CTRYAG	2 cut(s)	680, 760
BstSLI	GKGCMC	1 cut(s)	1503
BstSNI	TACGTA	1 cut(s)	1363
BstUI	CGCG	1 cut(s)	721
BstV1I	GCAGC	6 cut(s)	111, 694, 1039, 1051, 1237, 1683
BstV2I	GAAGAC	1 cut(s)	1551
BstX2I	RGATCY	5 cut(s)	367, 553, 1271, 1369, 1726
BstXI	CCANNNNNNTGG	3 cut(s)	1116, 1413, 1540
BstYI	RGATCY	5 cut(s)	367, 553, 1271, 1369, 1726
Bsu15I	ATCGAT	1 cut(s)	991
BsuI	GTATCC	1 cut(s)	1857
BsuRI	GGCC	3 cut(s)	1122, 1458, 1845
BsuTUI	ATCGAT	1 cut(s)	991
BtgI	CCRYGG	1 cut(s)	945
BtsCI	GGATG	9 cut(s)	355, 454, 697, 742, 743, 1042, 1175, 1222, 1331
BtsIMutI	CAGTG	6 cut(s)	594, 640, 837, 976, 1377, 1501
BveI	ACCTGC	1 cut(s)	1814
Cac8I	GCNNGC	4 cut(s)	41, 1652, 1897, 1901
CaiI	CAGNNNCTG	2 cut(s)	1337, 1806
CciI	TCATGA	1 cut(s)	292
CfoI	GCGC	1 cut(s)	723
Cfr10I	RCCGGY	1 cut(s)	1458
Cfr13I	GGNCC	2 cut(s)	1120, 1828
Cfr9I	CCCGGG	1 cut(s)	1769
ClaI	ATCGAT	1 cut(s)	991
CseI	GACGC	1 cut(s)	869
CsiI	ACCWGGT	1 cut(s)	1108
Csp6I	GTAC	6 cut(s)	187, 604, 843, 998, 1343, 1835
CspCI	CAANNNNNGTGG	4 cut(s)	190, 225, 720, 755
CviQI	GTAC	6 cut(s)	187, 604, 843, 998, 1343, 1835
DpnI	GATC	8 cut(s)	245, 369, 555, 1273, 1371, 1516, 1635, 1728
DpnII	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
EaeI	YGGCCR	2 cut(s)	1456, 1843
Eam1104I	CTCTTC	8 cut(s)	11, 48, 80, 141, 161, 823, 1545, 1731
EarI	CTCTTC	8 cut(s)	11, 48, 80, 141, 161, 823, 1545, 1731
Ecl136II	GAGCTC	1 cut(s)	290
Eco105I	TACGTA	1 cut(s)	1363
Eco130I	CCWWGG	2 cut(s)	459, 731
Eco24I	GRGCYC	1 cut(s)	292
Eco31I	GGTCTC	3 cut(s)	220, 327, 1422
Eco47I	GGWCC	1 cut(s)	1828
Eco53kI	GAGCTC	1 cut(s)	290
Eco57I	CTGAAG	2 cut(s)	500, 1755
Eco88I	CYCGRG	1 cut(s)	1769
EcoICRI	GAGCTC	1 cut(s)	290
EcoO109I	RGGNCCY	1 cut(s)	1828
EcoRI	GAATTC	1 cut(s)	416
EcoRII	CCWGG	3 cut(s)	1108, 1274, 1830
EcoT14I	CCWWGG	2 cut(s)	459, 731
EcoT22I	ATGCAT	2 cut(s)	823, 1585
EcoT38I	GRGCYC	1 cut(s)	292
ErhI	CCWWGG	2 cut(s)	459, 731
Esp3I	CGTCTC	2 cut(s)	114, 263
FaqI	GGGAC	2 cut(s)	1449, 1834
FbaI	TGATCA	1 cut(s)	1633
Fnu4HI	GCNGC	7 cut(s)	100, 683, 1028, 1065, 1178, 1226, 1697
FokI	GGATG	9 cut(s)	342, 461, 704, 730, 749, 1049, 1182, 1229, 1338
FriOI	GRGCYC	1 cut(s)	292
Fsp4HI	GCNGC	7 cut(s)	100, 683, 1028, 1065, 1178, 1226, 1697
FspBI	CTAG	6 cut(s)	888, 1083, 1154, 1269, 1428, 1626
GlaI	GCGC	1 cut(s)	722
GluI	GCNGC	7 cut(s)	100, 683, 1028, 1065, 1178, 1226, 1697
GsaI	CCCAGC	1 cut(s)	1341
GsuI	CTGGAG	1 cut(s)	1592
HaeIII	GGCC	3 cut(s)	1122, 1458, 1845
HapII	CCGG	4 cut(s)	279, 1459, 1692, 1770
HgaI	GACGC	1 cut(s)	869
HhaI	GCGC	1 cut(s)	723
Hin1I	GRCGYC	1 cut(s)	880
Hin6I	GCGC	1 cut(s)	721
HinP1I	GCGC	1 cut(s)	721
HincII	GTYRAC	1 cut(s)	256
HindII	GTYRAC	1 cut(s)	256
HinfI	GANTC	7 cut(s)	196, 676, 727, 768, 1402, 1468, 1907
HpaII	CCGG	4 cut(s)	279, 1459, 1692, 1770
HphI	GGTGA	9 cut(s)	268, 437, 475, 622, 1022, 1095, 1366, 1532, 1865
Hpy166II	GTNNAC	7 cut(s)	256, 276, 606, 638, 930, 1080, 1484
Hpy8I	GTNNAC	7 cut(s)	256, 276, 606, 638, 930, 1080, 1484
HpyCH4III	ACNGT	6 cut(s)	314, 508, 934, 960, 1002, 1496
HpyCH4IV	ACGT	4 cut(s)	252, 272, 1362, 1764
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1186, 1599, 1896
HpySE526I	ACGT	4 cut(s)	252, 272, 1362, 1764
Hsp92I	GRCGYC	1 cut(s)	880
HspAI	GCGC	1 cut(s)	721
Ksp22I	TGATCA	1 cut(s)	1633
Kzo9I	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
LguI	GCTCTTC	1 cut(s)	1545
LmnI	GCTCC	3 cut(s)	287, 949, 1620
Lsp1109I	GCAGC	6 cut(s)	111, 694, 1039, 1051, 1237, 1683
LweI	GCATC	7 cut(s)	165, 211, 752, 1051, 1207, 1316, 1324
MabI	ACCWGGT	1 cut(s)	1108
MaeI	CTAG	6 cut(s)	888, 1083, 1154, 1269, 1428, 1626
MaeII	ACGT	4 cut(s)	252, 272, 1362, 1764
MaeIII	GTNAC	3 cut(s)	508, 835, 1796
MalI	GATC	8 cut(s)	245, 369, 555, 1273, 1371, 1516, 1635, 1728
MboI	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
MfeI	CAATTG	1 cut(s)	1686
MflI	RGATCY	5 cut(s)	367, 553, 1271, 1369, 1726
MhlI	GDGCHC	3 cut(s)	292, 1503, 1617
MlsI	TGGCCA	1 cut(s)	1845
MluCI	AATT	8 cut(s)	416, 436, 666, 964, 1307, 1686, 1755, 1784
MluNI	TGGCCA	1 cut(s)	1845
MlyI	GAGTC	2 cut(s)	190, 721
MmeI	TCCRAC	6 cut(s)	287, 899, 916, 1412, 1430, 1795
Mox20I	TGGCCA	1 cut(s)	1845
Mph1103I	ATGCAT	2 cut(s)	823, 1585
MscI	TGGCCA	1 cut(s)	1845
MseI	TTAA	2 cut(s)	435, 1511
MslI	CAYNNNNRTG	3 cut(s)	1132, 1808, 1851
Msp20I	TGGCCA	1 cut(s)	1845
MspI	CCGG	4 cut(s)	279, 1459, 1692, 1770
MspR9I	CCNGG	6 cut(s)	1110, 1276, 1693, 1770, 1771, 1832
MunI	CAATTG	1 cut(s)	1686
Mva1269I	GAATGC	3 cut(s)	525, 823, 1699
MvaI	CCWGG	3 cut(s)	1110, 1276, 1832
MvnI	CGCG	1 cut(s)	721
MwoI	GCNNNNNNNGC	3 cut(s)	1186, 1599, 1896
NciI	CCSGG	3 cut(s)	1693, 1770, 1771
NdeII	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
NlaIV	GGNNCC	6 cut(s)	231, 943, 951, 1121, 1728, 1829
NmuCI	GTSAC	3 cut(s)	508, 835, 1796
NsiI	ATGCAT	2 cut(s)	823, 1585
NspI	RCATGY	4 cut(s)	187, 594, 797, 1654
OliI	CACNNNNGTG	2 cut(s)	1808, 1851
PaeI	GCATGC	1 cut(s)	1654
PagI	TCATGA	1 cut(s)	292
PaqCI	CACCTGC	1 cut(s)	1814
PciSI	GCTCTTC	1 cut(s)	1545
PctI	GAATGC	3 cut(s)	525, 823, 1699
PfeI	GAWTC	5 cut(s)	676, 768, 1402, 1468, 1907
PkrI	GCNGC	7 cut(s)	101, 684, 1029, 1066, 1179, 1227, 1698
PleI	GAGTC	2 cut(s)	190, 721
PpsI	GAGTC	2 cut(s)	190, 721
Ppu21I	YACGTR	1 cut(s)	1363
PpuMI	RGGWCCY	1 cut(s)	1828
PshAI	GACNNNNGTC	1 cut(s)	1826
PsiI	TTATAA	1 cut(s)	582
Psp124BI	GAGCTC	1 cut(s)	292
Psp1406I	AACGTT	1 cut(s)	1764
Psp5II	RGGWCCY	1 cut(s)	1828
Psp6I	CCWGG	3 cut(s)	1108, 1274, 1830
PspFI	CCCAGC	1 cut(s)	1337
PspGI	CCWGG	3 cut(s)	1108, 1274, 1830
PspN4I	GGNNCC	6 cut(s)	231, 943, 951, 1121, 1728, 1829
PspPI	GGNCC	2 cut(s)	1120, 1828
PspPPI	RGGWCCY	1 cut(s)	1828
PstI	CTGCAG	2 cut(s)	684, 764
PstNI	CAGNNNCTG	2 cut(s)	1337, 1806
PsuI	RGATCY	5 cut(s)	367, 553, 1271, 1369, 1726
RsaI	GTAC	6 cut(s)	188, 605, 844, 999, 1344, 1836
RsaNI	GTAC	6 cut(s)	187, 604, 843, 998, 1343, 1835
RseI	CAYNNNNRTG	3 cut(s)	1132, 1808, 1851
SacI	GAGCTC	1 cut(s)	292
SapI	GCTCTTC	1 cut(s)	1545
SaqAI	TTAA	2 cut(s)	435, 1511
SatI	GCNGC	7 cut(s)	100, 683, 1028, 1065, 1178, 1226, 1697
Sau3AI	GATC	8 cut(s)	243, 367, 553, 1271, 1369, 1514, 1633, 1726
Sau96I	GGNCC	2 cut(s)	1120, 1828
ScaI	AGTACT	1 cut(s)	999
SchI	GAGTC	2 cut(s)	190, 721
ScrFI	CCNGG	6 cut(s)	1110, 1276, 1693, 1770, 1771, 1832
SduI	GDGCHC	3 cut(s)	292, 1503, 1617
SexAI	ACCWGGT	1 cut(s)	1108
SfaNI	GCATC	7 cut(s)	165, 211, 752, 1051, 1207, 1316, 1324
SfcI	CTRYAG	2 cut(s)	680, 760
SinI	GGWCC	1 cut(s)	1828
SmaI	CCCGGG	1 cut(s)	1771
SmiMI	CAYNNNNRTG	3 cut(s)	1132, 1808, 1851
SmlI	CTYRAG	1 cut(s)	905
SmoI	CTYRAG	1 cut(s)	905
SnaBI	TACGTA	1 cut(s)	1363
SphI	GCATGC	1 cut(s)	1654
Sse9I	AATT	8 cut(s)	416, 436, 666, 964, 1307, 1686, 1755, 1784
SsiI	CCGC	3 cut(s)	1177, 1507, 1610
SspI	AATATT	1 cut(s)	623
SspMI	CTAG	6 cut(s)	888, 1083, 1154, 1269, 1428, 1626
SstI	GAGCTC	1 cut(s)	292
StyD4I	CCNGG	6 cut(s)	1108, 1274, 1691, 1768, 1769, 1830
StyI	CCWWGG	2 cut(s)	459, 731
TaaI	ACNGT	6 cut(s)	314, 508, 934, 960, 1002, 1496
TaiI	ACGT	4 cut(s)	255, 275, 1365, 1767
TaqI	TCGA	4 cut(s)	118, 267, 650, 991
TaqII	GACCGA	1 cut(s)	293
TasI	AATT	8 cut(s)	416, 436, 666, 964, 1307, 1686, 1755, 1784
TatI	WGTACW	2 cut(s)	603, 997
TauI	GCSGC	1 cut(s)	1180
TfiI	GAWTC	5 cut(s)	676, 768, 1402, 1468, 1907
Tru1I	TTAA	2 cut(s)	435, 1511
Tru9I	TTAA	2 cut(s)	435, 1511
TscAI	CASTG	6 cut(s)	601, 640, 844, 976, 1384, 1501
TseFI	GTSAC	3 cut(s)	508, 835, 1796
TseI	GCWGC	6 cut(s)	99, 682, 1027, 1064, 1225, 1696
Tsp45I	GTSAC	3 cut(s)	508, 835, 1796
TspDTI	ATGAA	6 cut(s)	17, 144, 309, 708, 1122, 1401
TspGWI	ACGGA	3 cut(s)	516, 761, 934
TspMI	CCCGGG	1 cut(s)	1769
TspRI	CASTG	6 cut(s)	601, 640, 844, 976, 1384, 1501
VpaK11BI	GGWCC	1 cut(s)	1828
XapI	RAATTY	4 cut(s)	416, 666, 1755, 1784
XceI	RCATGY	4 cut(s)	187, 594, 797, 1654
XcmI	CCANNNNNNNNNTGG	2 cut(s)	208, 1113
XmaI	CCCGGG	1 cut(s)	1769
XspI	CTAG	6 cut(s)	888, 1083, 1154, 1269, 1428, 1626
ZrmI	AGTACT	1 cut(s)	999
Zsp2I	ATGCAT	2 cut(s)	823, 1585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.