Rmu_ssc0000244.1_g000018

protein UNUSUAL FLORAL

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000244.1
Physical Location & Seq
Reverse (-)
103786 .. 105096
1311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000244.1_g000018.1.cds

Sequence Viewer

Length: 1311 bp
atggaagcctttcatccctctctagcatttcctttctcatacatctttagcactgctactagcgctggacctagtgcttctcttgctaacaccatatcaagtgatccatggatggaccctagaatatggagtagacttccaggccagctacttgatcgcgttatcgcctttcttccaccgcctgccttctttcgagcccggtgtgtctgtaagagatggtatggtctcttgttcaccaatgccttcctcgagttgtacatccagctcactcagcgccagcgccattggttcctcttcttcaagcaaaagagccccaagaacagctacatttacaggaatggagggaacagtagtaacactactaacatttgtgaagggtacctctttgacccttatgagcttgcatggtactgcctctcttttcctcttgttccgtctgggttctccccatgtgcttcttcaggtggtttgatctgttgggtttctgaagaggctggtccaaaaagtctcattctctccaacccaattgttggttctgtgacccaattacctccaactctgaggtcaaggctctgcccttccataggcctaagtgtcacccctacatcgattgatgtcactgttgctggagatgacatgatctctccatatgctgtgaagaacttgacttctgaaagcttccacatagatggtggtgggtttttctcactctggggaatcaactcttctctgccaaggctttgtagttttgagtcaggaagaatggttcatcttcatggaagactctactccatgaactacagccctttcagtgtcttggcctatgatgtggcagcaaacaattggtggaagattcaggctcccatgagaaggtttctgaggtttccaagcttggtggagagcagtggaaagctgctgttggttgctgctgttgagaagagcaggctgaatgtgcctaaaagcttgaggatttggggattgcagtcttgtggaacaacttggtttgagatggagagaatgccacagcagctttatgttcagtttgcagcgatcgaaaacggaaacggtttccattgtgttggcaatggagagttcattattatcatgattccgggttccggtaaggctttgctgtttgacatgtgcaggaaactgtggcaatgggttcctccatgcccttatgttcaatatggtggtgggggtgatggtgatttgcatggttttgcgtatgaaccaagacttgctacaccagtcactgtgcttctggatcagttgactaatccattccagtcttttagtgtggttaactag

Protein Analysis

436

Amino Acids

48.67

Weight (kDa)

8.66

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30950
fragaria_vesca FvH4_3g03990 FvH4_3g12960
malus_domestica MD05G1246800.v1.1 MD10G1227400.v1.1
prunus_persica Prupe.4G117600_v2.0.a1 Prupe.4G117800_v2.0.a1
pyrus_communis pycom05g22270
rosa_chinensis RchiOBHm_Chr5g0021071
rosa_laevigata RLG00000032581
rosa_multiflora Rmu_ssc0000244.1_g000018
rosa_roxburghii Rroxscaffold_1G00057390
rosa_rugosa Rorug05G0064100
rosa_samantha Rh5BG153400 Rh5CG166300 Rh5DG153000
rosa_wichuraiana Rw5G013660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 378
AccB1I GGYRCC 1 cut(s) 378
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 1 cut(s) 133
AccII CGCG 1 cut(s) 159
AciI CCGC 1 cut(s) 179
AclWI GGATC 2 cut(s) 98, 1275
AcuI CTGAAG 2 cut(s) 444, 507
AfaI GTAC 3 cut(s) 257, 380, 410
AfeI AGCGCT 1 cut(s) 64
AfiI CCNNNNNNNGG 4 cut(s) 530, 584, 870, 1118
AflIII ACRYGT 1 cut(s) 1140
AgsI TTSAA 2 cut(s) 301, 1187
AjnI CCWGG 1 cut(s) 139
AjuI GAANNNNNNNTTGG 2 cut(s) 517, 549
AloI GAACNNNNNNTCC 2 cut(s) 750, 782
AluBI AGCT 9 cut(s) 148, 265, 324, 400, 678, 891, 913, 963, 1030
AluI AGCT 9 cut(s) 148, 265, 324, 400, 678, 891, 913, 963, 1030
Alw26I GTCTC 2 cut(s) 230, 512
AlwI GGATC 2 cut(s) 98, 1275
AlwNI CAGNNNCTG 1 cut(s) 1256
Ama87I CYCGRG 1 cut(s) 248
Aor51HI AGCGCT 1 cut(s) 64
AoxI GGCC 3 cut(s) 142, 586, 819
ApeKI GCWGC 5 cut(s) 833, 913, 926, 1027, 1046
Asp700I GAANNNNTTC 1 cut(s) 9
Asp718I GGTACC 1 cut(s) 378
AspLEI GCGC 3 cut(s) 65, 276, 282
AspS9I GGNCC 3 cut(s) 68, 115, 497
AsuC2I CCSGG 2 cut(s) 199, 1113
AsuHPI GGTGA 4 cut(s) 226, 589, 1214, 1220
AvaI CYCGRG 1 cut(s) 248
AvaII GGWCC 3 cut(s) 68, 115, 497
BanI GGYRCC 1 cut(s) 378
BanII GRGCYC 2 cut(s) 199, 314
BbsI GAAGAC 1 cut(s) 787
BbvI GCAGC 5 cut(s) 845, 900, 913, 1039, 1058
BccI CCATC 5 cut(s) 106, 210, 683, 1003, 1199
BciT130I CCWGG 1 cut(s) 141
BcnI CCSGG 2 cut(s) 199, 1113
BcoDI GTCTC 2 cut(s) 230, 512
BfaI CTAG 5 cut(s) 23, 60, 72, 120, 1309
BfmI CTRYAG 1 cut(s) 799
BfoI RGCGCY 3 cut(s) 66, 277, 283
BisI GCNGC 5 cut(s) 834, 914, 927, 1028, 1047
BlsI GCNGC 5 cut(s) 835, 915, 928, 1029, 1048
Bme1390I CCNGG 3 cut(s) 141, 199, 1113
Bme18I GGWCC 3 cut(s) 68, 115, 497
BmeT110I CYCGRG 1 cut(s) 248
BmgT120I GGNCC 3 cut(s) 68, 115, 497
BmiI GGNNCC 6 cut(s) 117, 290, 380, 861, 1117, 1167
BmrFI CCNGG 3 cut(s) 141, 199, 1113
BpiI GAAGAC 1 cut(s) 787
BpmI CTGGAG 1 cut(s) 648
BpuEI CTTGAG 1 cut(s) 985
BpuMI CCSGG 2 cut(s) 199, 1113
Bsa29I ATCGAT 1 cut(s) 608
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 2 cut(s) 107, 734
BsaWI WCCGGW 1 cut(s) 1118
Bsc4I CCNNNNNNNGG 4 cut(s) 530, 584, 870, 1118
Bse1I ACTGG 2 cut(s) 1250, 1288
Bse3DI GCAATG 2 cut(s) 1090, 1166
BseBI CCWGG 1 cut(s) 141
BseCI ATCGAT 1 cut(s) 608
BseDI CCNNGG 2 cut(s) 107, 734
BseGI GGATG 3 cut(s) 13, 117, 258
BseLI CCNNNNNNNGG 4 cut(s) 530, 584, 870, 1118
BseMI GCAATG 2 cut(s) 1090, 1166
BseMII CTCAG 3 cut(s) 284, 551, 869
BseNI ACTGG 2 cut(s) 1250, 1288
BseXI GCAGC 5 cut(s) 845, 900, 913, 1039, 1058
BsgI GTGCAG 1 cut(s) 1165
Bsh1236I CGCG 1 cut(s) 159
Bsh1285I CGRYCG 1 cut(s) 1053
BshFI GGCC 3 cut(s) 144, 588, 821
BshNI GGYRCC 1 cut(s) 378
BshVI ATCGAT 1 cut(s) 608
BsiEI CGRYCG 1 cut(s) 1053
BsiHKCI CYCGRG 1 cut(s) 248
BsiSI CCGG 3 cut(s) 199, 1112, 1119
BslI CCNNNNNNNGG 4 cut(s) 530, 584, 870, 1118
BsmAI GTCTC 2 cut(s) 230, 512
BsmI GAATGC 1 cut(s) 1023
BsnI GGCC 3 cut(s) 144, 588, 821
Bso31I GGTCTC 1 cut(s) 230
BsoBI CYCGRG 1 cut(s) 248
Bsp1286I GDGCHC 2 cut(s) 199, 314
Bsp1407I TGTACA 1 cut(s) 255
Bsp143I GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
Bsp19I CCATGG 1 cut(s) 107
BspACI CCGC 1 cut(s) 179
BspANI GGCC 3 cut(s) 144, 588, 821
BspCNI CTCAG 3 cut(s) 283, 552, 870
BspDI ATCGAT 1 cut(s) 608
BspFNI CGCG 1 cut(s) 159
BspHI TCATGA 1 cut(s) 1104
BspLI GGNNCC 6 cut(s) 117, 290, 380, 861, 1117, 1167
BspPI GGATC 2 cut(s) 98, 1275
BspQI GCTCTTC 1 cut(s) 932
BspT107I GGYRCC 1 cut(s) 378
BspTNI GGTCTC 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 1090, 1166
BsrGI TGTACA 1 cut(s) 255
BsrI ACTGG 2 cut(s) 1250, 1288
BssECI CCNNGG 2 cut(s) 107, 734
BssMI GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
BssT1I CCWWGG 2 cut(s) 107, 734
Bst2UI CCWGG 1 cut(s) 141
Bst4CI ACNGT 5 cut(s) 350, 622, 1067, 1155, 1258
Bst6I CTCTTC 4 cut(s) 299, 483, 730, 932
BstAUI TGTACA 1 cut(s) 255
BstC8I GCNNGC 5 cut(s) 146, 183, 278, 402, 944
BstDEI CTNAG 4 cut(s) 270, 560, 590, 878
BstDSI CCRYGG 1 cut(s) 107
BstENI CCTNNNNNAGG 1 cut(s) 582
BstF5I GGATG 3 cut(s) 13, 117, 258
BstFNI CGCG 1 cut(s) 159
BstH2I RGCGCY 3 cut(s) 66, 277, 283
BstHHI GCGC 3 cut(s) 65, 276, 282
BstKTI GATC 6 cut(s) 106, 157, 474, 642, 1053, 1270
BstMAI GTCTC 2 cut(s) 230, 512
BstMBI GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
BstMCI CGRYCG 1 cut(s) 1053
BstMWI GCNNNNNNNGC 5 cut(s) 62, 83, 271, 952, 1027
BstNI CCWGG 1 cut(s) 141
BstNSI RCATGY 1 cut(s) 1144
BstSCI CCNGG 3 cut(s) 139, 197, 1111
BstSFI CTRYAG 1 cut(s) 799
BstUI CGCG 1 cut(s) 159
BstV1I GCAGC 5 cut(s) 845, 900, 913, 1039, 1058
BstV2I GAAGAC 1 cut(s) 787
BstXI CCANNNNNNTGG 2 cut(s) 689, 1079
Bsu15I ATCGAT 1 cut(s) 608
BsuRI GGCC 3 cut(s) 144, 588, 821
BsuTUI ATCGAT 1 cut(s) 608
BtgI CCRYGG 1 cut(s) 107
BtsCI GGATG 3 cut(s) 13, 117, 258
BtsI GCAGTG 2 cut(s) 51, 910
BtsIMutI CAGTG 5 cut(s) 51, 618, 817, 910, 1254
Cac8I GCNNGC 5 cut(s) 146, 183, 278, 402, 944
CaiI CAGNNNCTG 1 cut(s) 1256
CciI TCATGA 1 cut(s) 1104
CfoI GCGC 3 cut(s) 65, 276, 282
Cfr13I GGNCC 3 cut(s) 68, 115, 497
ClaI ATCGAT 1 cut(s) 608
Csp6I GTAC 3 cut(s) 256, 379, 409
CspCI CAANNNNNGTGG 2 cut(s) 876, 911
CviQI GTAC 3 cut(s) 256, 379, 409
DdeI CTNAG 4 cut(s) 270, 560, 590, 878
DpnI GATC 6 cut(s) 105, 156, 473, 641, 1052, 1269
DpnII GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
Eam1104I CTCTTC 4 cut(s) 299, 483, 730, 932
EarI CTCTTC 4 cut(s) 299, 483, 730, 932
Eco130I CCWWGG 2 cut(s) 107, 734
Eco147I AGGCCT 1 cut(s) 588
Eco24I GRGCYC 2 cut(s) 199, 314
Eco31I GGTCTC 1 cut(s) 230
Eco47I GGWCC 3 cut(s) 68, 115, 497
Eco47III AGCGCT 1 cut(s) 64
Eco57I CTGAAG 2 cut(s) 444, 507
Eco88I CYCGRG 1 cut(s) 248
EcoNI CCTNNNNNAGG 1 cut(s) 582
EcoRII CCWGG 1 cut(s) 139
EcoT14I CCWWGG 2 cut(s) 107, 734
EcoT38I GRGCYC 2 cut(s) 199, 314
ErhI CCWWGG 2 cut(s) 107, 734
FauNDI CATATG 1 cut(s) 649
FblI GTMKAC 1 cut(s) 133
Fnu4HI GCNGC 5 cut(s) 834, 914, 927, 1028, 1047
FokI GGATG 2 cut(s) 124, 245
FriOI GRGCYC 2 cut(s) 199, 314
Fsp4HI GCNGC 5 cut(s) 834, 914, 927, 1028, 1047
FspBI CTAG 5 cut(s) 23, 60, 72, 120, 1309
GlaI GCGC 3 cut(s) 64, 275, 281
GluI GCNGC 5 cut(s) 834, 914, 927, 1028, 1047
GsuI CTGGAG 1 cut(s) 648
HaeII RGCGCY 3 cut(s) 66, 277, 283
HaeIII GGCC 3 cut(s) 144, 588, 821
HapII CCGG 3 cut(s) 199, 1112, 1119
HhaI GCGC 3 cut(s) 65, 276, 282
Hin6I GCGC 3 cut(s) 63, 274, 280
HinP1I GCGC 3 cut(s) 63, 274, 280
HincII GTYRAC 2 cut(s) 1275, 1306
HindII GTYRAC 2 cut(s) 1275, 1306
HindIII AAGCTT 3 cut(s) 676, 889, 961
HinfI GANTC 5 cut(s) 717, 752, 783, 853, 1108
HpaI GTTAAC 1 cut(s) 1306
HpaII CCGG 3 cut(s) 199, 1112, 1119
HphI GGTGA 4 cut(s) 226, 589, 1214, 1220
Hpy166II GTNNAC 4 cut(s) 134, 234, 1275, 1306
Hpy188I TCNGA 4 cut(s) 487, 561, 673, 879
Hpy188III TCNNGA 3 cut(s) 756, 1105, 1265
Hpy8I GTNNAC 4 cut(s) 134, 234, 1275, 1306
HpyAV CCTTC 5 cut(s) 196, 253, 368, 588, 864
HpyCH4III ACNGT 5 cut(s) 350, 622, 1067, 1155, 1258
HpyCH4V TGCA 5 cut(s) 404, 982, 1046, 1146, 1216
HpyF10VI GCNNNNNNNGC 5 cut(s) 62, 83, 271, 952, 1027
HpyF3I CTNAG 4 cut(s) 270, 560, 590, 878
HspAI GCGC 3 cut(s) 63, 274, 280
KpnI GGTACC 1 cut(s) 382
KspAI GTTAAC 1 cut(s) 1306
Kzo9I GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
LguI GCTCTTC 1 cut(s) 932
LmnI GCTCC 1 cut(s) 865
Lsp1109I GCAGC 5 cut(s) 845, 900, 913, 1039, 1058
MaeI CTAG 5 cut(s) 23, 60, 72, 120, 1309
MaeIII GTNAC 5 cut(s) 353, 538, 595, 616, 1252
MalI GATC 6 cut(s) 105, 156, 473, 641, 1052, 1269
MboI GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
MfeI CAATTG 2 cut(s) 525, 841
MhlI GDGCHC 2 cut(s) 199, 314
MluCI AATT 3 cut(s) 525, 545, 841
MlyI GAGTC 2 cut(s) 761, 777
MmeI TCCRAC 2 cut(s) 543, 578
MroXI GAANNNNTTC 1 cut(s) 9
MseI TTAA 1 cut(s) 1305
MslI CAYNNNNRTG 2 cut(s) 687, 774
MspI CCGG 3 cut(s) 199, 1112, 1119
MspR9I CCNGG 3 cut(s) 141, 199, 1113
MunI CAATTG 2 cut(s) 525, 841
Mva1269I GAATGC 1 cut(s) 1023
MvaI CCWGG 1 cut(s) 141
MvnI CGCG 1 cut(s) 159
MwoI GCNNNNNNNGC 5 cut(s) 62, 83, 271, 952, 1027
NciI CCSGG 2 cut(s) 199, 1113
NcoI CCATGG 1 cut(s) 107
NdeI CATATG 1 cut(s) 649
NdeII GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
NlaIV GGNNCC 6 cut(s) 117, 290, 380, 861, 1117, 1167
NmuCI GTSAC 4 cut(s) 538, 595, 616, 1252
NspI RCATGY 1 cut(s) 1144
PaeR7I CTCGAG 1 cut(s) 248
PagI TCATGA 1 cut(s) 1104
PceI AGGCCT 1 cut(s) 588
PciI ACATGT 1 cut(s) 1140
PciSI GCTCTTC 1 cut(s) 932
PctI GAATGC 1 cut(s) 1023
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 3 cut(s) 717, 853, 1108
PflMI CCANNNNNTGG 1 cut(s) 530
PkrI GCNGC 5 cut(s) 835, 915, 928, 1029, 1048
Ple19I CGATCG 1 cut(s) 1053
PleI GAGTC 2 cut(s) 760, 777
PpsI GAGTC 2 cut(s) 760, 777
PscI ACATGT 1 cut(s) 1140
Psp6I CCWGG 1 cut(s) 139
PspGI CCWGG 1 cut(s) 139
PspN4I GGNNCC 6 cut(s) 117, 290, 380, 861, 1117, 1167
PspPI GGNCC 3 cut(s) 68, 115, 497
PspXI VCTCGAGB 1 cut(s) 248
PstNI CAGNNNCTG 1 cut(s) 1256
PvuI CGATCG 1 cut(s) 1053
RsaI GTAC 3 cut(s) 257, 380, 410
RsaNI GTAC 3 cut(s) 256, 379, 409
RseI CAYNNNNRTG 2 cut(s) 687, 774
SapI GCTCTTC 1 cut(s) 932
SaqAI TTAA 1 cut(s) 1305
SatI GCNGC 5 cut(s) 834, 914, 927, 1028, 1047
Sau3AI GATC 6 cut(s) 103, 154, 471, 639, 1050, 1267
Sau96I GGNCC 3 cut(s) 68, 115, 497
SchI GAGTC 2 cut(s) 761, 777
ScrFI CCNGG 3 cut(s) 141, 199, 1113
SduI GDGCHC 2 cut(s) 199, 314
SfcI CTRYAG 1 cut(s) 799
Sfr274I CTCGAG 1 cut(s) 248
SinI GGWCC 3 cut(s) 68, 115, 497
SlaI CTCGAG 1 cut(s) 248
SmiMI CAYNNNNRTG 2 cut(s) 687, 774
SmlI CTYRAG 2 cut(s) 248, 964
SmoI CTYRAG 2 cut(s) 248, 964
Sse9I AATT 3 cut(s) 525, 545, 841
SseBI AGGCCT 1 cut(s) 588
SsiI CCGC 1 cut(s) 179
SspMI CTAG 5 cut(s) 23, 60, 72, 120, 1309
StuI AGGCCT 1 cut(s) 588
StyD4I CCNGG 3 cut(s) 139, 197, 1111
StyI CCWWGG 2 cut(s) 107, 734
TaaI ACNGT 5 cut(s) 350, 622, 1067, 1155, 1258
TaqI TCGA 4 cut(s) 193, 249, 608, 1053
TasI AATT 3 cut(s) 525, 545, 841
TatI WGTACW 1 cut(s) 255
TfiI GAWTC 3 cut(s) 717, 853, 1108
Tru1I TTAA 1 cut(s) 1305
Tru9I TTAA 1 cut(s) 1305
TscAI CASTG 5 cut(s) 58, 625, 817, 910, 1261
TseFI GTSAC 4 cut(s) 538, 595, 616, 1252
TseI GCWGC 5 cut(s) 833, 913, 926, 1027, 1046
Tsp45I GTSAC 4 cut(s) 538, 595, 616, 1252
TspDTI ATGAA 5 cut(s) 758, 764, 809, 1084, 1245
TspGWI ACGGA 2 cut(s) 423, 1074
TspRI CASTG 5 cut(s) 58, 625, 817, 910, 1261
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 3 cut(s) 68, 115, 497
XagI CCTNNNNNAGG 1 cut(s) 582
XceI RCATGY 1 cut(s) 1144
XcmI CCANNNNNNNNNTGG 1 cut(s) 689
XhoI CTCGAG 1 cut(s) 248
XmiI GTMKAC 1 cut(s) 133
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 5 cut(s) 23, 60, 72, 120, 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.