Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000291.1

Orthogroup ID

OG0005375

Physical Location & Seq

Genomic Coordinates Reverse (-)

43789 .. 53548

Gene Structure 9760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

atgggtgaaatggccaagaagcgtgtcatggttcccgccgagaacatcgacctgtccgccgtcaaataccagcaggaagaaatcaaggctccgcatttgacgggtttctttcttaagttgtttgtatggattgttgaggtccccattattggtgaaatggccaagaagcgtgtcatggttcccgccgagaacatcgacctgtccgccgttaaataccagcaggaagaaatcaaggaaccagaaaccggggttgttgttgtggatgaggatggaaaaccagaagacagagttggagtggccttgaaatgtcttccaaactatgatcctgctacctgtttgagtggggaagcaagtctatctttccggtactggaagatccgcgattatgcttatgcttatcgctccaagattgcaaccccatctatggttgcagagcacattatttcagctttagaagaattcagcaataagaaacctcctcaacctttgttgctatcttttgacgctaaagaattgaggaaccaagctgcagcttcaacaaagcggtttgaggaaggcaatccgatatctatcttagatgggattttcgtggcaatcaaggatgatatagactgctgtcctcatccgtccaagggtggaacaacatgggtgcatgaggttcgcactgtcagtagggatgcagtttgcgtttcaaagttgcgtagttgtggtgggatttttattgggaaagcaaatatgcatgagatgggcatgggtacaactggaaataatccaaattatggaacaacaagaaatccccatgcaccagacaggtatacaggagggtcttcctctggcccagcagcaattgtagcatctggactatgctctgctgcccttggaactgacggtggaggttcaatccgtattccttcttcgctctgtggcgtagtgggtttcaagacaacatatggacggactgatataggaggggcattatgtgattctggcactgtggaaattattggaccaattgcttctacagtggaggatgttattctagtgtactcagctattttgggcgcctctcttgcagatagaatttgtttgaaaccgtccccagcttctgtgccagatttgtcattatatgaaagtttgaatgttctgggatccttgcgtctggggaaatatacagagtggtttaacgacgtgcattcaactgatatctctgataagtgtgaggatgttcttagtcttctatcaaaaaatcacggttgcgaaattgtggaaattgttatacctgagctccatgaaatgcgcactgctcatcttgtttcaattggatctgaatgtgccagttctctaagtccggattgtgaggatggaaatggtgtgaagttgacatatgatacacggactagtatggccctgttccaatcattttctgcggcagactatgttactgcccagtgttttaggagaaggatcatgtaccatcatatggaaatcttcaagaaggtcgatgtgatagtgactcccacaactggcatgacagcacccaaaattccacctagtgctcttaaagatggggagacagacatgcaggttacagcttttcttatgcagtttatcattgctgcaaatcttcttggacttccagccatttctgtacctgttggctatgataaacaaggacttccaataggtctgcaactaattggccgtccctggggggaagcttcaattctgcgtttggcttctgcaatagaggaactctgcgtgaagtccaggaagaggcctgcgtcatattttgatgttctaaaatccaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005794 GO:0005886 GO:0006066 GO:0006576 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009308 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0012505 GO:0016020 GO:0016787 GO:0016810 GO:0016811 GO:0031090 GO:0034308 GO:0034641 GO:0042439 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044106 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0047412 GO:0050896 GO:0051704 GO:0051707 GO:0070291 GO:0071704 GO:0071944 GO:0098542 GO:0098588 GO:0098805 GO:1901564 GO:1901615

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Amidase

Protein Analysis

603

Amino Acids

65.31

Weight (kDa)

5.75

Isoelectric Point (pI)

39.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	165 - 576	7.7e-84	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64440
fragaria_vesca	FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120
malus_domestica	MD05G1050200.v1.1
prunus_persica	Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1
pyrus_communis	pycom05g04210
rosa_chinensis	RchiOBHm_Chr6g0269381
rosa_laevigata	RLG00000013854
rosa_multiflora	Rmu_sc0003735.1_g000029 Rmu_sc0015769.1_g000001 Rmu_ssc0000291.1_g000010
rosa_roxburghii	Rroxscaffold_7G00198770
rosa_rugosa	Rorug06G0047400
rosa_samantha	Rh6AG167800 Rh6AG331500 Rh6BG173100 Rh6CG167200 Rh6DG159000
rosa_wichuraiana	Rw6G028780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1298
Acc36I	ACCTGC	1 cut(s)	1573
AccB1I	GGYRCC	1 cut(s)	1061
AccB7I	CCANNNNNTGG	2 cut(s)	779, 1480
AccI	GTMKAC	1 cut(s)	815
AccII	CGCG	1 cut(s)	381
AccIII	TCCGGA	1 cut(s)	1348
AciI	CCGC	8 cut(s)	36, 57, 92, 183, 204, 379, 544, 1427
AclWI	GGATC	6 cut(s)	317, 370, 1143, 1156, 1330, 1472
AcoI	YGGCCR	3 cut(s)	12, 159, 1699
AcsI	RAATTY	3 cut(s)	458, 1080, 1542
AcyI	GRCGYC	1 cut(s)	1062
AdeI	CACNNNGTG	1 cut(s)	1553
AfaI	GTAC	5 cut(s)	368, 757, 1046, 1472, 1650
AfiI	CCNNNNNNNGG	9 cut(s)	149, 245, 424, 632, 779, 1480, 1523, 1708, 1773
AflII	CTTAAG	1 cut(s)	113
AhlI	ACTAGT	1 cut(s)	1397
AjiI	CACGTC	1 cut(s)	1189
AjnI	CCWGG	2 cut(s)	1706, 1766
AjuI	GAANNNNNNNTTGG	2 cut(s)	273, 305
AluBI	AGCT	8 cut(s)	449, 527, 533, 1052, 1103, 1285, 1592, 1718
AluI	AGCT	8 cut(s)	449, 527, 533, 1052, 1103, 1285, 1592, 1718
Alw21I	GWGCWC	3 cut(s)	438, 1287, 1558
Alw26I	GTCTC	1 cut(s)	1565
AlwI	GGATC	6 cut(s)	317, 370, 1143, 1156, 1330, 1472
AlwNI	CAGNNNCTG	1 cut(s)	1106
Aor13HI	TCCGGA	1 cut(s)	1348
AoxI	GGCC	7 cut(s)	12, 159, 297, 835, 1404, 1699, 1775
ApeKI	GCWGC	5 cut(s)	527, 530, 842, 872, 1616
ApoI	RAATTY	3 cut(s)	458, 1080, 1542
AspLEI	GCGC	2 cut(s)	1064, 1299
AspS9I	GGNCC	4 cut(s)	139, 836, 1007, 1405
AsuC2I	CCSGG	1 cut(s)	247
AsuHPI	GGTGA	2 cut(s)	17, 164
AvaII	GGWCC	2 cut(s)	139, 1007
BalI	TGGCCA	2 cut(s)	14, 161
BamHI	GGATCC	1 cut(s)	1148
BanI	GGYRCC	1 cut(s)	1061
BanII	GRGCYC	1 cut(s)	1287
BarI	GAAGNNNNNNTAC	2 cut(s)	898, 930
BbsI	GAAGAC	4 cut(s)	288, 302, 819, 1226
Bbv12I	GWGCWC	3 cut(s)	438, 1287, 1558
BbvI	GCAGC	5 cut(s)	514, 542, 854, 859, 1603
BccI	CCATC	7 cut(s)	263, 427, 572, 739, 1355, 1482, 1559
BceAI	ACGGC	3 cut(s)	44, 191, 1686
BcgI	CGANNNNNNTGC	2 cut(s)	641, 675
BciT130I	CCWGG	2 cut(s)	1708, 1768
BcnI	CCSGG	1 cut(s)	247
BcoDI	GTCTC	1 cut(s)	1565
BcuI	ACTAGT	1 cut(s)	1397
BfaI	CTAG	3 cut(s)	1040, 1398, 1551
BfmI	CTRYAG	2 cut(s)	528, 1020
BfoI	RGCGCY	1 cut(s)	1065
BfrI	CTTAAG	1 cut(s)	113
BfuAI	ACCTGC	1 cut(s)	1573
BisI	GCNGC	6 cut(s)	528, 531, 843, 873, 1428, 1617
BlsI	GCNGC	6 cut(s)	529, 532, 844, 874, 1429, 1618
Bme1390I	CCNGG	3 cut(s)	247, 1708, 1768
Bme18I	GGWCC	2 cut(s)	139, 1007
BmgBI	CACGTC	1 cut(s)	1189
BmgT120I	GGNCC	4 cut(s)	139, 836, 1007, 1405
BmiI	GGNNCC	8 cut(s)	33, 90, 141, 180, 237, 521, 1063, 1150
BmrFI	CCNGG	3 cut(s)	247, 1708, 1768
BmrI	ACTGGG	1 cut(s)	1441
BmsI	GCATC	2 cut(s)	667, 863
BmuI	ACTGGG	1 cut(s)	1441
BoxI	GACNNNNGTC	1 cut(s)	615
BpiI	GAAGAC	4 cut(s)	288, 302, 819, 1226
Bpu10I	CCTNAGC	1 cut(s)	1281
BpuMI	CCSGG	1 cut(s)	247
BsaBI	GATNNNNATC	1 cut(s)	569
BsaHI	GRCGYC	1 cut(s)	1062
BsaJI	CCNNGG	5 cut(s)	246, 630, 877, 1706, 1707
BsaWI	WCCGGW	2 cut(s)	363, 1348
BsaXI	ACNNNNNCTCC	2 cut(s)	1269, 1299
Bsc4I	CCNNNNNNNGG	9 cut(s)	149, 245, 424, 632, 779, 1480, 1523, 1708, 1773
Bse1I	ACTGG	5 cut(s)	374, 766, 1335, 1447, 1528
Bse3DI	GCAATG	1 cut(s)	1611
Bse8I	GATNNNNATC	1 cut(s)	569
BseAI	TCCGGA	1 cut(s)	1348
BseBI	CCWGG	2 cut(s)	1708, 1768
BseDI	CCNNGG	5 cut(s)	246, 630, 877, 1706, 1707
BseGI	GGATG	8 cut(s)	268, 274, 607, 622, 682, 1036, 1228, 1366
BseJI	GATNNNNATC	1 cut(s)	569
BseLI	CCNNNNNNNGG	9 cut(s)	149, 245, 424, 632, 779, 1480, 1523, 1708, 1773
BseMI	GCAATG	1 cut(s)	1611
BseMII	CTCAG	2 cut(s)	1062, 1272
BseNI	ACTGG	5 cut(s)	374, 766, 1335, 1447, 1528
BseRI	GAGGAG	1 cut(s)	468
BseXI	GCAGC	5 cut(s)	514, 542, 854, 859, 1603
BseYI	CCCAGC	2 cut(s)	838, 1099
Bsh1236I	CGCG	1 cut(s)	381
BshFI	GGCC	7 cut(s)	14, 161, 299, 837, 1406, 1701, 1777
BshNI	GGYRCC	1 cut(s)	1061
BsiHKAI	GWGCWC	3 cut(s)	438, 1287, 1558
BsiSI	CCGG	3 cut(s)	246, 364, 1349
BslFI	GGGAC	3 cut(s)	125, 1081, 1689
BslI	CCNNNNNNNGG	9 cut(s)	149, 245, 424, 632, 779, 1480, 1523, 1708, 1773
BsmAI	GTCTC	1 cut(s)	1565
BsmFI	GGGAC	3 cut(s)	125, 1081, 1689
BsmI	GAATGC	1 cut(s)	1192
BsnI	GGCC	7 cut(s)	14, 161, 299, 837, 1406, 1701, 1777
Bsp1286I	GDGCHC	3 cut(s)	438, 1287, 1558
Bsp13I	TCCGGA	1 cut(s)	1348
Bsp143I	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
BspACI	CCGC	8 cut(s)	36, 57, 92, 183, 204, 379, 544, 1427
BspANI	GGCC	7 cut(s)	14, 161, 299, 837, 1406, 1701, 1777
BspCNI	CTCAG	2 cut(s)	1061, 1273
BspEI	TCCGGA	1 cut(s)	1348
BspFNI	CGCG	1 cut(s)	381
BspLI	GGNNCC	8 cut(s)	33, 90, 141, 180, 237, 521, 1063, 1150
BspMAI	CTGCAG	1 cut(s)	532
BspMI	ACCTGC	1 cut(s)	1573
BspPI	GGATC	6 cut(s)	317, 370, 1143, 1156, 1330, 1472
BspT107I	GGYRCC	1 cut(s)	1061
BspTI	CTTAAG	1 cut(s)	113
BsrDI	GCAATG	1 cut(s)	1611
BsrI	ACTGG	5 cut(s)	374, 766, 1335, 1447, 1528
BssECI	CCNNGG	5 cut(s)	246, 630, 877, 1706, 1707
BssMI	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
BssNAI	GTATAC	1 cut(s)	816
BssNI	GRCGYC	1 cut(s)	1062
BssT1I	CCWWGG	2 cut(s)	630, 877
Bst1107I	GTATAC	1 cut(s)	816
Bst2UI	CCWGG	2 cut(s)	1708, 1768
Bst4CI	ACNGT	6 cut(s)	667, 890, 994, 1024, 1095, 1253
Bst6I	CTCTTC	1 cut(s)	1766
BstACI	GRCGYC	1 cut(s)	1062
BstAFI	CTTAAG	1 cut(s)	113
BstC8I	GCNNGC	1 cut(s)	1779
BstDEI	CTNAG	5 cut(s)	574, 1048, 1229, 1281, 1343
BstF5I	GGATG	8 cut(s)	268, 274, 607, 622, 682, 1036, 1228, 1366
BstFNI	CGCG	1 cut(s)	381
BstH2I	RGCGCY	1 cut(s)	1065
BstHHI	GCGC	2 cut(s)	1064, 1299
BstKTI	GATC	5 cut(s)	325, 378, 1151, 1325, 1467
BstMAI	GTCTC	1 cut(s)	1565
BstMBI	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
BstMWI	GCNNNNNNNGC	2 cut(s)	851, 1070
BstNI	CCWGG	2 cut(s)	1708, 1768
BstNSI	RCATGY	1 cut(s)	1582
BstPAI	GACNNNNGTC	1 cut(s)	615
BstSCI	CCNGG	3 cut(s)	245, 1706, 1766
BstSFI	CTRYAG	2 cut(s)	528, 1020
BstUI	CGCG	1 cut(s)	381
BstV1I	GCAGC	5 cut(s)	514, 542, 854, 859, 1603
BstV2I	GAAGAC	4 cut(s)	288, 302, 819, 1226
BstX2I	RGATCY	3 cut(s)	375, 1148, 1322
BstYI	RGATCY	3 cut(s)	375, 1148, 1322
BstZ17I	GTATAC	1 cut(s)	816
BsuRI	GGCC	7 cut(s)	14, 161, 299, 837, 1406, 1701, 1777
BtrI	CACGTC	1 cut(s)	1189
BtsCI	GGATG	8 cut(s)	268, 274, 607, 622, 682, 1036, 1228, 1366
BtsI	GCAGTG	1 cut(s)	1299
BtsIMutI	CAGTG	5 cut(s)	663, 990, 1029, 1299, 1454
BveI	ACCTGC	1 cut(s)	1573
Cac8I	GCNNGC	1 cut(s)	1779
CaiI	CAGNNNCTG	1 cut(s)	1106
CfoI	GCGC	2 cut(s)	1064, 1299
Cfr13I	GGNCC	4 cut(s)	139, 836, 1007, 1405
CseI	GACGC	3 cut(s)	512, 1145, 1770
Csp6I	GTAC	5 cut(s)	367, 756, 1045, 1471, 1649
CviQI	GTAC	5 cut(s)	367, 756, 1045, 1471, 1649
DdeI	CTNAG	5 cut(s)	574, 1048, 1229, 1281, 1343
DinI	GGCGCC	1 cut(s)	1063
DpnI	GATC	5 cut(s)	324, 377, 1150, 1324, 1466
DpnII	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
DraIII	CACNNNGTG	1 cut(s)	1553
EaeI	YGGCCR	3 cut(s)	12, 159, 1699
Eam1104I	CTCTTC	1 cut(s)	1766
EarI	CTCTTC	1 cut(s)	1766
EciI	GGCGGA	2 cut(s)	46, 193
Ecl136II	GAGCTC	1 cut(s)	1285
Eco130I	CCWWGG	2 cut(s)	630, 877
Eco147I	AGGCCT	1 cut(s)	1777
Eco24I	GRGCYC	1 cut(s)	1287
Eco32I	GATATC	2 cut(s)	567, 1204
Eco47I	GGWCC	2 cut(s)	139, 1007
Eco53kI	GAGCTC	1 cut(s)	1285
EcoICRI	GAGCTC	1 cut(s)	1285
EcoO109I	RGGNCCY	1 cut(s)	139
EcoRI	GAATTC	1 cut(s)	458
EcoRII	CCWGG	2 cut(s)	1706, 1766
EcoRV	GATATC	2 cut(s)	567, 1204
EcoT14I	CCWWGG	2 cut(s)	630, 877
EcoT22I	ATGCAT	1 cut(s)	741
EcoT38I	GRGCYC	1 cut(s)	1287
EgeI	GGCGCC	1 cut(s)	1063
EheI	GGCGCC	1 cut(s)	1063
ErhI	CCWWGG	2 cut(s)	630, 877
FalI	AAGNNNNNCTT	2 cut(s)	343, 375
FaqI	GGGAC	3 cut(s)	125, 1081, 1689
FauI	CCCGC	2 cut(s)	43, 190
FauNDI	CATATG	3 cut(s)	949, 1384, 1479
FblI	GTMKAC	1 cut(s)	815
Fnu4HI	GCNGC	6 cut(s)	528, 531, 843, 873, 1428, 1617
FokI	GGATG	8 cut(s)	275, 281, 609, 614, 689, 1043, 1235, 1373
FriOI	GRGCYC	1 cut(s)	1287
Fsp4HI	GCNGC	6 cut(s)	528, 531, 843, 873, 1428, 1617
FspAI	RTGCGCAY	1 cut(s)	1298
FspBI	CTAG	3 cut(s)	1040, 1398, 1551
FspI	TGCGCA	1 cut(s)	1298
GlaI	GCGC	2 cut(s)	1063, 1298
GluI	GCNGC	6 cut(s)	528, 531, 843, 873, 1428, 1617
GsaI	CCCAGC	2 cut(s)	842, 1103
HaeII	RGCGCY	1 cut(s)	1065
HaeIII	GGCC	7 cut(s)	14, 161, 299, 837, 1406, 1701, 1777
HapII	CCGG	3 cut(s)	246, 364, 1349
HgaI	GACGC	3 cut(s)	512, 1145, 1770
HhaI	GCGC	2 cut(s)	1064, 1299
Hin1I	GRCGYC	1 cut(s)	1062
Hin6I	GCGC	2 cut(s)	1062, 1297
HinP1I	GCGC	2 cut(s)	1062, 1297
HincII	GTYRAC	1 cut(s)	1380
HindII	GTYRAC	1 cut(s)	1380
HindIII	AAGCTT	1 cut(s)	1716
HinfI	GANTC	2 cut(s)	983, 1513
HpaII	CCGG	3 cut(s)	246, 364, 1349
HphI	GGTGA	2 cut(s)	17, 164
Hpy166II	GTNNAC	3 cut(s)	816, 1045, 1380
Hpy188I	TCNGA	3 cut(s)	564, 1210, 1327
Hpy188III	TCNNGA	4 cut(s)	858, 940, 1349, 1492
Hpy8I	GTNNAC	3 cut(s)	816, 1045, 1380
Hpy99I	CGWCG	1 cut(s)	1190
HpyAV	CCTTC	4 cut(s)	548, 921, 1455, 1489
HpyCH4III	ACNGT	6 cut(s)	667, 890, 994, 1024, 1095, 1253
HpyCH4IV	ACGT	1 cut(s)	1188
HpyF10VI	GCNNNNNNNGC	2 cut(s)	851, 1070
HpyF3I	CTNAG	5 cut(s)	574, 1048, 1229, 1281, 1343
HpySE526I	ACGT	1 cut(s)	1188
Hsp92I	GRCGYC	1 cut(s)	1062
HspAI	GCGC	2 cut(s)	1062, 1297
KasI	GGCGCC	1 cut(s)	1061
Kpn2I	TCCGGA	1 cut(s)	1348
Kzo9I	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
LmnI	GCTCC	3 cut(s)	94, 407, 1290
Lsp1109I	GCAGC	5 cut(s)	514, 542, 854, 859, 1603
LweI	GCATC	2 cut(s)	667, 863
MaeI	CTAG	3 cut(s)	1040, 1398, 1551
MaeII	ACGT	1 cut(s)	1188
MaeIII	GTNAC	3 cut(s)	1438, 1510, 1585
MalI	GATC	5 cut(s)	324, 377, 1150, 1324, 1466
MboI	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
MfeI	CAATTG	3 cut(s)	846, 1011, 1317
MflI	RGATCY	3 cut(s)	375, 1148, 1322
MhlI	GDGCHC	3 cut(s)	438, 1287, 1558
MlsI	TGGCCA	2 cut(s)	14, 161
MluNI	TGGCCA	2 cut(s)	14, 161
Mly113I	GGCGCC	1 cut(s)	1062
MlyI	GAGTC	1 cut(s)	1507
MmeI	TCCRAC	1 cut(s)	271
Mox20I	TGGCCA	2 cut(s)	14, 161
Mph1103I	ATGCAT	1 cut(s)	741
MroI	TCCGGA	1 cut(s)	1348
MscI	TGGCCA	2 cut(s)	14, 161
MseI	TTAA	4 cut(s)	114, 210, 1182, 1560
Msp20I	TGGCCA	2 cut(s)	14, 161
MspCI	CTTAAG	1 cut(s)	113
MspI	CCGG	3 cut(s)	246, 364, 1349
MspR9I	CCNGG	3 cut(s)	247, 1708, 1768
MunI	CAATTG	3 cut(s)	846, 1011, 1317
Mva1269I	GAATGC	1 cut(s)	1192
MvaI	CCWGG	2 cut(s)	1708, 1768
MvnI	CGCG	1 cut(s)	381
MwoI	GCNNNNNNNGC	2 cut(s)	851, 1070
NarI	GGCGCC	1 cut(s)	1062
NciI	CCSGG	1 cut(s)	247
NdeI	CATATG	3 cut(s)	949, 1384, 1479
NdeII	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
NlaIV	GGNNCC	8 cut(s)	33, 90, 141, 180, 237, 521, 1063, 1150
NmeAIII	GCCGAG	2 cut(s)	64, 211
NmuCI	GTSAC	1 cut(s)	1510
NsbI	TGCGCA	1 cut(s)	1298
NsiI	ATGCAT	1 cut(s)	741
NspI	RCATGY	1 cut(s)	1582
PasI	CCCWGGG	1 cut(s)	1707
PceI	AGGCCT	1 cut(s)	1777
PctI	GAATGC	1 cut(s)	1192
PfeI	GAWTC	1 cut(s)	983
PflMI	CCANNNNNTGG	2 cut(s)	779, 1480
PfoI	TCCNGGA	1 cut(s)	1766
PkrI	GCNGC	6 cut(s)	529, 532, 844, 874, 1429, 1618
PleI	GAGTC	1 cut(s)	1507
PluTI	GGCGCC	1 cut(s)	1065
PpsI	GAGTC	1 cut(s)	1507
PpuMI	RGGWCCY	1 cut(s)	139
PshAI	GACNNNNGTC	1 cut(s)	615
Psp124BI	GAGCTC	1 cut(s)	1287
Psp5II	RGGWCCY	1 cut(s)	139
Psp6I	CCWGG	2 cut(s)	1706, 1766
PspFI	CCCAGC	2 cut(s)	838, 1099
PspGI	CCWGG	2 cut(s)	1706, 1766
PspN4I	GGNNCC	8 cut(s)	33, 90, 141, 180, 237, 521, 1063, 1150
PspPI	GGNCC	4 cut(s)	139, 836, 1007, 1405
PspPPI	RGGWCCY	1 cut(s)	139
PstI	CTGCAG	1 cut(s)	532
PstNI	CAGNNNCTG	1 cut(s)	1106
PsuI	RGATCY	3 cut(s)	375, 1148, 1322
RsaI	GTAC	5 cut(s)	368, 757, 1046, 1472, 1650
RsaNI	GTAC	5 cut(s)	367, 756, 1045, 1471, 1649
SacI	GAGCTC	1 cut(s)	1287
SaqAI	TTAA	4 cut(s)	114, 210, 1182, 1560
SatI	GCNGC	6 cut(s)	528, 531, 843, 873, 1428, 1617
Sau3AI	GATC	5 cut(s)	322, 375, 1148, 1322, 1464
Sau96I	GGNCC	4 cut(s)	139, 836, 1007, 1405
SchI	GAGTC	1 cut(s)	1507
ScrFI	CCNGG	3 cut(s)	247, 1708, 1768
SduI	GDGCHC	3 cut(s)	438, 1287, 1558
SfaNI	GCATC	2 cut(s)	667, 863
SfcI	CTRYAG	2 cut(s)	528, 1020
SfoI	GGCGCC	1 cut(s)	1063
SinI	GGWCC	2 cut(s)	139, 1007
SmlI	CTYRAG	1 cut(s)	113
SmoI	CTYRAG	1 cut(s)	113
SpeI	ACTAGT	1 cut(s)	1397
SseBI	AGGCCT	1 cut(s)	1777
SsiI	CCGC	8 cut(s)	36, 57, 92, 183, 204, 379, 544, 1427
SspDI	GGCGCC	1 cut(s)	1061
SspMI	CTAG	3 cut(s)	1040, 1398, 1551
SstI	GAGCTC	1 cut(s)	1287
StuI	AGGCCT	1 cut(s)	1777
StyD4I	CCNGG	3 cut(s)	245, 1706, 1766
StyI	CCWWGG	2 cut(s)	630, 877
TaaI	ACNGT	6 cut(s)	667, 890, 994, 1024, 1095, 1253
TaiI	ACGT	1 cut(s)	1191
TaqI	TCGA	3 cut(s)	48, 195, 1500
TatI	WGTACW	1 cut(s)	1044
TauI	GCSGC	1 cut(s)	1430
TfiI	GAWTC	1 cut(s)	983
Tru1I	TTAA	4 cut(s)	114, 210, 1182, 1560
Tru9I	TTAA	4 cut(s)	114, 210, 1182, 1560
TscAI	CASTG	5 cut(s)	670, 997, 1029, 1306, 1454
TseFI	GTSAC	1 cut(s)	1510
TseI	GCWGC	5 cut(s)	527, 530, 842, 872, 1616
Tsp45I	GTSAC	1 cut(s)	1510
TspDTI	ATGAA	2 cut(s)	1143, 1305
TspGWI	ACGGA	4 cut(s)	615, 893, 970, 1408
TspRI	CASTG	5 cut(s)	670, 997, 1029, 1306, 1454
Van91I	CCANNNNNTGG	2 cut(s)	779, 1480
Vha464I	CTTAAG	1 cut(s)	113
VpaK11BI	GGWCC	2 cut(s)	139, 1007
XapI	RAATTY	3 cut(s)	458, 1080, 1542
XceI	RCATGY	1 cut(s)	1582
XmiI	GTMKAC	1 cut(s)	815
XspI	CTAG	3 cut(s)	1040, 1398, 1551
Zsp2I	ATGCAT	1 cut(s)	741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.