Rmu_ssc0000384.1_g000001

UDP-glucose glycoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000384.1
OG0006844
Physical Location & Seq
Forward (+)
3482 .. 14379
10898 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2880 bp
atgcactatgtagaaggagcatttgtagaaacagtattaccaaaggtaaaatctcctcctcaaggcatactgctgaagctgcagaaggagcaaacttacaaggaacttgcacatgaaagcaccatgtttgtctttaagctgggcttggctaagcttcagtgcagtttgctgatgaatggactcgtgttggattctagtgaggaggctcttataaattccatgaacgatgagatgcccagaatacaggagcaagtatactatggccatataaattctcaaacaaatgttcttgacaagtttttgtcagaaagtggtaccactcgctataatccacagattattgccggtggaaaaccaaggttcacatctctgtgcacatctgttcttggaggggaaggtgtcttcaatgatattggttatttgcattcccccgaaactgtggatgatttgaagcctgtgactcatcttctagtggttgatgttgcatcaaagaaagggatgaagctgcttcatgaagccttacactatctgattgaagggtctaatagggctcgagtaggagtgcttttcggtgtcaatcagggtgctgatctttctagtctcctttttgttgaagtatttcaaatcaccgcatcattgcatagccacaagaaggatgtgttacttttcttggatcaggtgtgctccttgtttgaacataatcacatgcttgcaccgtctgaaggtgcggagggcactcaagcattcatagataaagtttctgaattggctgagacaaatgggttatcatcaaaggcctataaatcagctctttcggacttttctgctgacaaattgagaaaacagttgaataaggtggcacagtttttatataggcaacttggccttgattctggtgttaatgcagtcattactaacggacgggtaacggttgtaaatgaggagagcacattgttgagccatgatttaaatcttcttgagtctctggagtttacacagagaataaagcatattgttgaaataatagaagaagtgaagtggcagcatgtggatccagacacactgacaagcaaattcattagtgatactatcatgtttgtgtcttcttcaatggccatgcgggatcgaagttctgaaggtgcacgctttgaggttttgaatgcagaatatagtgccatcgttctgaacaatgaaaattctagtatccatatagatgcagttattgatcctttaagtccatctggccagaagctatcatcaattcttcgggttctatggaaatatgttcagcctagcatgagaattgtattaaatccgttgagttctcttgttgatcttcctctgaagaattactacagatatgtagtaccgacagtggatgacttcagcagcactgactacacagtaaatgggccaaaagccttttttgcaaacatgccactgtccaaaaccctcactatgaatcttgatgttcctgatccatggcttgttgagcctgttattgcagtgcatgacttggataatattttgcttgagaatcttggtgagacaagaacattacaagctgtttttgaacttgaagctcttgttttgacgggtcattgttctgagaaagatcatgatccgcccagaggccttcagttaattattggtaccaagagtgcaccccatttggttgatactcttgtgatggccaatctgggttattggcaaatgaaagtctctcctggtgtttggtacctacaacttgctccaggaagaagttctgagctttatgttttaaaagaggatggtgatggaagtgagagcaaaacattatcaaaacgcatcaccattaatgatctgcggggtagagtagttcacctggaagtagtaaagaaaaagggaaaggagcatgaaaaattgctgctttctgatgttaatgacaagacacaggatgctaccgagggaagtagctggaactccaactttataaaatgggcttctggtttaattggtggcagtgagcactcaaaacagagtgaaagtactttatcgaacacccgtcgtccagttaaattctggttcataaagaactatctctctcctcagttcaaggatgtgattccacatatggctcatgaatatggctttgagtatcagctaatcacctacaagtggcctacatggttgcacaagcaaaaagaaaagcaacgaattatttgggcctataaaattttgttccttgatgttatattccccctttcgttagaaaaggtcatctttgttgatgcagatcagatcgtcagggcagacatgggagaactctatgacatggatataaaaggaagacctctggcatatactcctttctgtgacaacaacaaggatatggatggatatcggttttggagacaaggtttctggaaagaacatttacgggggagatcttatcatataagtgctttgtatgtcgttgatttgaagaaatttcgagagactgcagcaggagataatctgagagttttctatgagactcttagcaaggacccaaatagtctttcaaatttggatcaggatcttccaaactatgctcaacatacagtgcccatattttcattaccacaagaatggctttggtgtgagtcatggtgtggtaatgccacaaaagccaaagcaaaaaccatagatctttgcaacaacccaatgacaaaggaacccaagctccagggtgccagaagaatagtttctgagtggccagatcttgatttggaggctaggcagttcactgcgaaaatcttaggtgatgaagtcgcaatccaagaacctccaccagatcctaatcaatcaggatcagtgatggatagcccaccagacctggaatctaaggcagagttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003980 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006011 GO:0006139 GO:0006457 GO:0006458 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006515 GO:0006725 GO:0006793 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008194 GO:0008219 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009225 GO:0009626 GO:0009719 GO:0009725 GO:0009751 GO:0009812 GO:0009987 GO:0010033 GO:0010204 GO:0010243 GO:0010498 GO:0012501 GO:0012505 GO:0014070 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0023052 GO:0030163 GO:0030968 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0034620 GO:0034641 GO:0034645 GO:0034976 GO:0035251 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0042221 GO:0042440 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046527 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051084 GO:0051603 GO:0051716 GO:0051788 GO:0055086 GO:0065007 GO:0070085 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0080134 GO:0097359 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Glyco_transf_8 UDP-g_GGTase

Protein Analysis

959

Amino Acids

108.2

Weight (kDa)

5.7

Isoelectric Point (pI)

35.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin_14 PF18402 21 - 113 1.6e-13 Thioredoxin-like domain
Thioredoxin_15 PF18403 133 - 372 2.5e-41 Thioredoxin-like domain
UDP-g_GGTase PF06427 533 - 636 2.6e-29 UDP-glucose:Glycoprotein Glucosyltransferase
Glyco_transf_24 PF18404 675 - 921 6.9e-131 Glucosyltransferase 24
Glyco_transf_8 PF01501 675 - 878 2.2e-06 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 212, 1973
Acc65I GGTACC 3 cut(s) 314, 1652, 1737
AccB1I GGYRCC 4 cut(s) 314, 1652, 1737, 2711
AccI GTMKAC 1 cut(s) 255
AciI CCGC 5 cut(s) 630, 728, 1120, 1625, 1846
AcoI YGGCCR 5 cut(s) 262, 1113, 1243, 1692, 2735
AcsI RAATTY 8 cut(s) 214, 271, 1073, 1195, 2057, 2214, 2468, 2545
AcuI CTGAAG 7 cut(s) 95, 140, 741, 1155, 1364, 1369, 1622
AfaI GTAC 5 cut(s) 316, 1368, 1654, 1739, 2029
AfiI CCNNNNNNNGG 5 cut(s) 62, 652, 722, 1631, 2157
AjnI CCWGG 5 cut(s) 1726, 1753, 1863, 2706, 2856
AjuI GAANNNNNNNTTGG 2 cut(s) 2524, 2556
AloI GAACNNNNNNTCC 2 cut(s) 2688, 2720
Alw21I GWGCWC 6 cut(s) 377, 686, 950, 1144, 1666, 2010
Alw26I GTCTC 8 cut(s) 605, 767, 987, 1541, 1726, 2386, 2471, 2507
Alw44I GTGCAC 3 cut(s) 373, 1140, 1662
Ama87I CYCGRG 1 cut(s) 552
ApaLI GTGCAC 3 cut(s) 373, 1140, 1662
ApeKI GCWGC 6 cut(s) 79, 505, 1042, 1389, 1906, 2483
ApoI RAATTY 8 cut(s) 214, 271, 1073, 1195, 2057, 2214, 2468, 2545
AseI ATTAAT 1 cut(s) 1836
Asp700I GAANNNNTTC 3 cut(s) 618, 1762, 2725
Asp718I GGTACC 3 cut(s) 314, 1652, 1737
AspS9I GGNCC 3 cut(s) 1412, 2205, 2527
AsuHPI GGTGA 7 cut(s) 619, 1556, 1805, 1822, 1853, 2140, 2795
AvaI CYCGRG 1 cut(s) 552
AvaII GGWCC 1 cut(s) 2527
BaeGI GKGCMC 5 cut(s) 377, 737, 1144, 1666, 2589
BaeI ACNNNNGTAYC 2 cut(s) 1671, 1704
BalI TGGCCA 5 cut(s) 264, 1115, 1245, 1694, 2737
BamHI GGATCC 1 cut(s) 1051
BanI GGYRCC 4 cut(s) 314, 1652, 1737, 2711
BanII GRGCYC 1 cut(s) 553
BarI GAAGNNNNNNTAC 2 cut(s) 1337, 1369
BauI CACGAG 1 cut(s) 182
BbsI GAAGAC 3 cut(s) 394, 1095, 2335
Bbv12I GWGCWC 6 cut(s) 377, 686, 950, 1144, 1666, 2010
BbvI GCAGC 6 cut(s) 66, 492, 1054, 1401, 1893, 2495
BccI CCATC 7 cut(s) 1184, 1246, 1684, 1784, 1790, 2369, 2833
BciT130I CCWGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
BciVI GTATCC 1 cut(s) 1214
BcoDI GTCTC 8 cut(s) 605, 767, 987, 1541, 1726, 2386, 2471, 2507
BfaI CTAG 6 cut(s) 195, 470, 597, 1200, 1293, 2757
BfmI CTRYAG 3 cut(s) 80, 1354, 2481
BfuI GTATCC 1 cut(s) 1214
BglII AGATCT 3 cut(s) 2426, 2668, 2740
BisI GCNGC 6 cut(s) 80, 506, 1043, 1390, 1907, 2484
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 6 cut(s) 81, 507, 1044, 1391, 1908, 2485
BmcAI AGTACT 1 cut(s) 2029
Bme1390I CCNGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
Bme18I GGWCC 1 cut(s) 2527
BmeT110I CYCGRG 1 cut(s) 552
BmgT120I GGNCC 3 cut(s) 1412, 2205, 2527
BmiI GGNNCC 7 cut(s) 316, 1053, 1654, 1739, 2529, 2697, 2713
BmrFI CCNGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
BmsI GCATC 7 cut(s) 222, 494, 641, 1204, 1836, 1927, 2260
BpiI GAAGAC 3 cut(s) 394, 1095, 2335
BpmI CTGGAG 3 cut(s) 1007, 1737, 2690
Bpu1102I GCTNAGC 1 cut(s) 150
BpuEI CTTGAG 4 cut(s) 45, 723, 998, 1553
BsaBI GATNNNNATC 6 cut(s) 969, 1620, 2274, 2379, 2556, 2820
BsaJI CCNNGG 4 cut(s) 356, 1481, 1944, 2707
BsaXI ACNNNNNCTCC 6 cut(s) 9, 39, 2383, 2413, 2688, 2718
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 652, 722, 1631, 2157
Bse118I RCCGGY 1 cut(s) 344
Bse1I ACTGG 1 cut(s) 2051
Bse3DI GCAATG 1 cut(s) 635
Bse8I GATNNNNATC 6 cut(s) 969, 1620, 2274, 2379, 2556, 2820
BseBI CCWGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
BseDI CCNNGG 4 cut(s) 356, 1481, 1944, 2707
BseGI GGATG 8 cut(s) 448, 504, 661, 1384, 1795, 1942, 2104, 2380
BseJI GATNNNNATC 6 cut(s) 969, 1620, 2274, 2379, 2556, 2820
BseLI CCNNNNNNNGG 5 cut(s) 62, 652, 722, 1631, 2157
BseMI GCAATG 1 cut(s) 635
BseMII CTCAG 6 cut(s) 762, 1599, 1758, 2102, 2489, 2721
BseNI ACTGG 1 cut(s) 2051
BseRI GAGGAG 5 cut(s) 45, 48, 215, 956, 2076
BseSI GKGCMC 5 cut(s) 377, 737, 1144, 1666, 2589
BseXI GCAGC 6 cut(s) 66, 492, 1054, 1401, 1893, 2495
BseYI CCCAGC 1 cut(s) 139
BsgI GTGCAG 1 cut(s) 181
BshNI GGYRCC 4 cut(s) 314, 1652, 1737, 2711
BsiHKAI GWGCWC 6 cut(s) 377, 686, 950, 1144, 1666, 2010
BsiHKCI CYCGRG 1 cut(s) 552
BsiSI CCGG 1 cut(s) 345
BslI CCNNNNNNNGG 5 cut(s) 62, 652, 722, 1631, 2157
BsmAI GTCTC 8 cut(s) 605, 767, 987, 1541, 1726, 2386, 2471, 2507
BsmI GAATGC 3 cut(s) 424, 743, 1165
BsoBI CYCGRG 1 cut(s) 552
Bsp1286I GDGCHC 9 cut(s) 377, 553, 686, 737, 950, 1144, 1666, 2010, 2589
Bsp1720I GCTNAGC 1 cut(s) 150
Bsp19I CCATGG 1 cut(s) 1481
BspACI CCGC 5 cut(s) 630, 728, 1120, 1625, 1846
BspCNI CTCAG 6 cut(s) 763, 1600, 1759, 2101, 2490, 2722
BspHI TCATGA 3 cut(s) 511, 1618, 2119
BspLI GGNNCC 7 cut(s) 316, 1053, 1654, 1739, 2529, 2697, 2713
BspMAI CTGCAG 2 cut(s) 84, 2485
BspT107I GGYRCC 4 cut(s) 314, 1652, 1737, 2711
BsrDI GCAATG 1 cut(s) 635
BsrFI RCCGGY 1 cut(s) 344
BsrI ACTGG 1 cut(s) 2051
BssAI RCCGGY 1 cut(s) 344
BssECI CCNNGG 4 cut(s) 356, 1481, 1944, 2707
BssNAI GTATAC 1 cut(s) 256
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 2 cut(s) 356, 1481
Bst1107I GTATAC 1 cut(s) 256
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
BstC8I GCNNGC 2 cut(s) 711, 1144
BstDSI CCRYGG 1 cut(s) 1481
BstENI CCTNNNNNAGG 1 cut(s) 60
BstF5I GGATG 8 cut(s) 448, 504, 661, 1384, 1795, 1942, 2104, 2380
BstMAI GTCTC 8 cut(s) 605, 767, 987, 1541, 1726, 2386, 2471, 2507
BstMWI GCNNNNNNNGC 5 cut(s) 79, 88, 1427, 1492, 2648
BstNI CCWGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
BstNSI RCATGY 3 cut(s) 709, 1049, 1438
BstSCI CCNGG 5 cut(s) 1726, 1753, 1863, 2706, 2856
BstSFI CTRYAG 3 cut(s) 80, 1354, 2481
BstSLI GKGCMC 5 cut(s) 377, 737, 1144, 1666, 2589
BstV1I GCAGC 6 cut(s) 66, 492, 1054, 1401, 1893, 2495
BstV2I GAAGAC 3 cut(s) 394, 1095, 2335
BstX2I RGATCY 6 cut(s) 1051, 2426, 2557, 2668, 2740, 2815
BstXI CCANNNNNNTGG 1 cut(s) 2610
BstYI RGATCY 6 cut(s) 1051, 2426, 2557, 2668, 2740, 2815
BstZ17I GTATAC 1 cut(s) 256
BsuI GTATCC 1 cut(s) 1214
BtgI CCRYGG 1 cut(s) 1481
BtsCI GGATG 8 cut(s) 448, 504, 661, 1384, 1795, 1942, 2104, 2380
BtsI GCAGTG 3 cut(s) 1512, 2008, 2766
Cac8I GCNNGC 2 cut(s) 711, 1144
CciI TCATGA 3 cut(s) 511, 1618, 2119
Cfr10I RCCGGY 1 cut(s) 344
Cfr13I GGNCC 3 cut(s) 1412, 2205, 2527
Csp6I GTAC 5 cut(s) 315, 1367, 1653, 1738, 2028
CviQI GTAC 5 cut(s) 315, 1367, 1653, 1738, 2028
DraI TTTAAA 2 cut(s) 969, 1782
EaeI YGGCCR 5 cut(s) 262, 1113, 1243, 1692, 2735
EciI GGCGGA 1 cut(s) 1614
Eco130I CCWWGG 2 cut(s) 356, 1481
Eco147I AGGCCT 2 cut(s) 797, 1635
Eco24I GRGCYC 1 cut(s) 553
Eco32I GATATC 1 cut(s) 2381
Eco47I GGWCC 1 cut(s) 2527
Eco57I CTGAAG 7 cut(s) 95, 140, 741, 1155, 1364, 1369, 1622
Eco88I CYCGRG 1 cut(s) 552
EcoNI CCTNNNNNAGG 1 cut(s) 60
EcoO109I RGGNCCY 1 cut(s) 2527
EcoRII CCWGG 5 cut(s) 1726, 1753, 1863, 2706, 2856
EcoRV GATATC 1 cut(s) 2381
EcoT14I CCWWGG 2 cut(s) 356, 1481
EcoT38I GRGCYC 1 cut(s) 553
ErhI CCWWGG 2 cut(s) 356, 1481
FalI AAGNNNNNCTT 6 cut(s) 128, 160, 2246, 2278, 2598, 2630
FauI CCCGC 2 cut(s) 1113, 1839
FauNDI CATATG 1 cut(s) 2112
FblI GTMKAC 1 cut(s) 255
Fnu4HI GCNGC 6 cut(s) 80, 506, 1043, 1390, 1907, 2484
FokI GGATG 8 cut(s) 455, 511, 668, 1391, 1802, 1949, 2111, 2387
FriOI GRGCYC 1 cut(s) 553
Fsp4HI GCNGC 6 cut(s) 80, 506, 1043, 1390, 1907, 2484
FspBI CTAG 6 cut(s) 195, 470, 597, 1200, 1293, 2757
GluI GCNGC 6 cut(s) 80, 506, 1043, 1390, 1907, 2484
GsaI CCCAGC 1 cut(s) 143
GsuI CTGGAG 3 cut(s) 1007, 1737, 2690
HapII CCGG 1 cut(s) 345
HindIII AAGCTT 1 cut(s) 152
HpaII CCGG 1 cut(s) 345
HphI GGTGA 7 cut(s) 619, 1556, 1805, 1822, 1853, 2140, 2795
Hpy166II GTNNAC 8 cut(s) 256, 363, 375, 993, 1142, 1664, 1861, 2766
Hpy8I GTNNAC 8 cut(s) 256, 363, 375, 993, 1142, 1664, 1861, 2766
Hpy99I CGWCG 1 cut(s) 2049
HpyAV CCTTC 8 cut(s) 8, 79, 389, 530, 646, 716, 1130, 1646
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 88, 1427, 1492, 2648
KpnI GGTACC 3 cut(s) 318, 1656, 1741
LmnI GCTCC 7 cut(s) 17, 88, 247, 689, 1756, 1891, 2709
Lsp1109I GCAGC 6 cut(s) 66, 492, 1054, 1401, 1893, 2495
LweI GCATC 7 cut(s) 222, 494, 641, 1204, 1836, 1927, 2260
MaeI CTAG 6 cut(s) 195, 470, 597, 1200, 1293, 2757
MaeIII GTNAC 4 cut(s) 457, 660, 925, 2354
MflI RGATCY 6 cut(s) 1051, 2426, 2557, 2668, 2740, 2815
MhlI GDGCHC 9 cut(s) 377, 553, 686, 737, 950, 1144, 1666, 2010, 2589
MlsI TGGCCA 5 cut(s) 264, 1115, 1245, 1694, 2737
MluNI TGGCCA 5 cut(s) 264, 1115, 1245, 1694, 2737
MlyI GAGTC 5 cut(s) 174, 454, 989, 2509, 2633
MmeI TCCRAC 2 cut(s) 168, 1989
Mox20I TGGCCA 5 cut(s) 264, 1115, 1245, 1694, 2737
MroXI GAANNNNTTC 3 cut(s) 618, 1762, 2725
MscI TGGCCA 5 cut(s) 264, 1115, 1245, 1694, 2737
MslI CAYNNNNRTG 6 cut(s) 370, 1097, 1212, 2124, 2439, 2608
Msp20I TGGCCA 5 cut(s) 264, 1115, 1245, 1694, 2737
MspI CCGG 1 cut(s) 345
MspR9I CCNGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
Mva1269I GAATGC 3 cut(s) 424, 743, 1165
MvaI CCWGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
MwoI GCNNNNNNNGC 5 cut(s) 79, 88, 1427, 1492, 2648
NcoI CCATGG 1 cut(s) 1481
NdeI CATATG 1 cut(s) 2112
NlaIV GGNNCC 7 cut(s) 316, 1053, 1654, 1739, 2529, 2697, 2713
NmuCI GTSAC 2 cut(s) 457, 2354
NspI RCATGY 3 cut(s) 709, 1049, 1438
PaeR7I CTCGAG 1 cut(s) 552
PagI TCATGA 3 cut(s) 511, 1618, 2119
PceI AGGCCT 2 cut(s) 797, 1635
PctI GAATGC 3 cut(s) 424, 743, 1165
PdmI GAANNNNTTC 3 cut(s) 618, 1762, 2725
PfeI GAWTC 6 cut(s) 191, 890, 1462, 1537, 2104, 2861
PfoI TCCNGGA 1 cut(s) 1753
PkrI GCNGC 6 cut(s) 81, 507, 1044, 1391, 1908, 2485
PleI GAGTC 5 cut(s) 174, 454, 988, 2509, 2632
PpsI GAGTC 5 cut(s) 174, 454, 988, 2509, 2632
PpuMI RGGWCCY 1 cut(s) 2527
PshBI ATTAAT 1 cut(s) 1836
PsiI TTATAA 2 cut(s) 212, 1973
Psp5II RGGWCCY 1 cut(s) 2527
Psp6I CCWGG 5 cut(s) 1726, 1753, 1863, 2706, 2856
PspFI CCCAGC 1 cut(s) 139
PspGI CCWGG 5 cut(s) 1726, 1753, 1863, 2706, 2856
PspN4I GGNNCC 7 cut(s) 316, 1053, 1654, 1739, 2529, 2697, 2713
PspPI GGNCC 3 cut(s) 1412, 2205, 2527
PspPPI RGGWCCY 1 cut(s) 2527
PspXI VCTCGAGB 1 cut(s) 552
PstI CTGCAG 2 cut(s) 84, 2485
PsuI RGATCY 6 cut(s) 1051, 2426, 2557, 2668, 2740, 2815
RsaI GTAC 5 cut(s) 316, 1368, 1654, 1739, 2029
RsaNI GTAC 5 cut(s) 315, 1367, 1653, 1738, 2028
RseI CAYNNNNRTG 6 cut(s) 370, 1097, 1212, 2124, 2439, 2608
SatI GCNGC 6 cut(s) 80, 506, 1043, 1390, 1907, 2484
Sau96I GGNCC 3 cut(s) 1412, 2205, 2527
ScaI AGTACT 1 cut(s) 2029
SchI GAGTC 5 cut(s) 174, 454, 989, 2509, 2633
ScrFI CCNGG 5 cut(s) 1728, 1755, 1865, 2708, 2858
SduI GDGCHC 9 cut(s) 377, 553, 686, 737, 950, 1144, 1666, 2010, 2589
SfaNI GCATC 7 cut(s) 222, 494, 641, 1204, 1836, 1927, 2260
SfcI CTRYAG 3 cut(s) 80, 1354, 2481
Sfr274I CTCGAG 1 cut(s) 552
SinI GGWCC 1 cut(s) 2527
SlaI CTCGAG 1 cut(s) 552
SmiI ATTTAAAT 1 cut(s) 969
SmiMI CAYNNNNRTG 6 cut(s) 370, 1097, 1212, 2124, 2439, 2608
SmlI CTYRAG 5 cut(s) 60, 552, 738, 977, 1532
SmoI CTYRAG 5 cut(s) 60, 552, 738, 977, 1532
SseBI AGGCCT 2 cut(s) 797, 1635
SsiI CCGC 5 cut(s) 630, 728, 1120, 1625, 1846
SspI AATATT 1 cut(s) 1525
SspMI CTAG 6 cut(s) 195, 470, 597, 1200, 1293, 2757
StuI AGGCCT 2 cut(s) 797, 1635
StyD4I CCNGG 5 cut(s) 1726, 1753, 1863, 2706, 2856
StyI CCWWGG 2 cut(s) 356, 1481
SwaI ATTTAAAT 1 cut(s) 969
TaqI TCGA 4 cut(s) 553, 1126, 2036, 2473
TatI WGTACW 1 cut(s) 2027
TfiI GAWTC 6 cut(s) 191, 890, 1462, 1537, 2104, 2861
TseFI GTSAC 2 cut(s) 457, 2354
TseI GCWGC 6 cut(s) 79, 505, 1042, 1389, 1906, 2483
Tsp45I GTSAC 2 cut(s) 457, 2354
TspGWI ACGGA 2 cut(s) 933, 1305
VneI GTGCAC 3 cut(s) 373, 1140, 1662
VpaK11BI GGWCC 1 cut(s) 2527
VspI ATTAAT 1 cut(s) 1836
XagI CCTNNNNNAGG 1 cut(s) 60
XapI RAATTY 8 cut(s) 214, 271, 1073, 1195, 2057, 2214, 2468, 2545
XceI RCATGY 3 cut(s) 709, 1049, 1438
XcmI CCANNNNNNNNNTGG 1 cut(s) 2058
XhoI CTCGAG 1 cut(s) 552
XmiI GTMKAC 1 cut(s) 255
XmnI GAANNNNTTC 3 cut(s) 618, 1762, 2725
XspI CTAG 6 cut(s) 195, 470, 597, 1200, 1293, 2757
ZrmI AGTACT 1 cut(s) 2029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.