Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002472

Physical Location & Seq

Genomic Coordinates Reverse (-)

27116285 .. 27126138

Gene Structure 9854 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00022020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGGTTTGTTTTTAGACCAGTTCCTATTTTTTCAGTCGTGTTTAAGCTCTGAAAAAATAGTGGTCAAGGCCGTCAAGCACAAGTTTGTGTTTTGCTGTTCCTGCTGTGGTTCTGTACTTTCTCAGGTTACAGTAAATGAAGTGCCAAGTGGGAGTTTCCCTTGCTTGTTTTATAAGTTTGATTTCGATTCAGCAAAGTCTCAGTGTCAGGCAAATCCTTCAGTTTTATCTTTGCATGCCATGATGGAAGTAATAGCAAATGGACATGTATATGTGATGCCAATGGCCTTCCTAAAGTGGCAGCTGATGGTCATGATACTAGTTGCTTTACAGCCTGCAACTGCACTTCTGGATCTCTTGATGCAGCACAATCTTCGAAAAGCGCTCTTCAAGCAAAGGTGCTTTACCTCTTGCTTGTTTGGAAGCAAAACAGGACCTTCACCTGGAGCAATTATTCAATTTTCATATTTGGACCTGGAAAATGCAACCAATAAGTTTTCAGATTCCAATCTAATAGGACTTGGAGGAAGTAGTTATGTTTATCGCGGTCAACTGAAAGATGGAAGTATTCTGGCGGTTAAGCGCCTCAAGACTCAGAAAGGGCCTGATATGGATTCTGTCTTTTTAACTGAGATTGAACTGTTATCCAGACTTCATCATTGTCATGTGGTACCTTTGCTCGGCTACTGCTTTCAAACCCATGGAAAACATACTGAGAGGCTATTGGTATTTGAGTACATGAATAATGGTAATCTGAGAGATTGTTTGGATGGGTCTGAAGGGAAAAACATGGATTGGAATACTCGAGTAGCAATTGCCATTGGAGCTGCAAGGGGTCTGGAATATCTCCATGATGCAGCTGCTCCAAGAATACTGCATAGAGATGTCAAATCCACAAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCGAAATGCTTAAAAGCTGATGGTCTCCCTAGTGCATCTAGTTCTCCGGCAAGAATGCAAGGTACGTTTGGTTATTTTGCACCGGAGTATGCAATTGTTGGAAAAGCATCTCTCAAGTCAGACGTTTTCAGTTTTGGGGTAGTTCTTCTTGAGCTTATCACTGGCAGGAAGCCCATTCACAGATCAACCAACAAGCTAGAAGAAAGCCTTGTCATATGGGCTACCCCTCGTTTACAGGATAGTAAGCGAGTAATCGCAGAGTTGCCTGATCCTGATTTGAATGGGAACTTCCCAGAAGAAGATATGCACATAATGGCTTACTTAGCAAAGGAATGCCTACTCTTAGACCCTGATTCTAGACCAACTATGAGTGAGGTTGTCCAGATCCTTTCTACTATTGCACCAGAGAGATCTAAAAGGAGAGGCATGCCTGTAAATTTGTTTCAGCACATGGGTCTTAAAGAAGCTGAGGAGCTAAGGCGAGACAAATCCGGAAAATGTTCACTTCGGTGTTCACTGCCACTAGATATTGACCGCAACCTCGGCGTTGAAAGAAGTGAAGATACTGCTTCAGATAAATATATGGAAAGATTGATCCTCTTGACTTCAAACGCTAGGAGTTGGCGCGCCTCTGATGATGAAACAGTGGACTTGACTGAGCCCAGGGTACACCAAAGGAAAGAGGTGAAACGGGCTCGCCCAGCGGTGCGGTGGCAACACCCATCAAGATGCCTCAAAGTTAATGTTGATGGAGTTTTCAATGAAAGCGACCAGCACGGTGGCGACTTTACATCACTAGTCCCCTCACCAGACATTACTGATGCCGGAGCTGGATCCACCGCCTCCTGGCACACCGCTGCTGGCCCCGGCTCCTCCCTACCATCGAGGAGGATGCTTGGAACTATGCTTGTGGCTTCTGTGCTGCTGTGGTCTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009888 GO:0009987 GO:0010008 GO:0010087 GO:0010089 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0031090 GO:0031410 GO:0031982 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0097708 GO:0098588 GO:0098805 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

628

Amino Acids

69.75

Weight (kDa)

8.05

Isoelectric Point (pI)

49.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	168 - 444	6.2e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	171 - 446	1.5e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002472)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28250 AT2G28250 AT2G28250 AT2G28250 AT2G28250 AT2G28250
fragaria_vesca	FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760
malus_domestica	MD03G1120900.v1.1 MD11G1139700.v1.1
prunus_persica	Prupe.6G104400_v2.0.a1
pyrus_communis	pycom11g11530
rosa_chinensis	RchiOBHm_Chr5g0058481
rosa_laevigata	RLG00000035227
rosa_multiflora	Rmu_sc0000367.1_g000133
rosa_roxburghii	Rroxscaffold_1G00022020
rosa_rugosa	Rorug05G0315400 Rorug05G0315400 Rorug05G0315400 Rorug05G0315500 Rorug05G0315600 Rorug05G0315700
rosa_samantha	Rh5AG381600 Rh5BG393200 Rh5CG417400 Rh5DG408600
rosa_wichuraiana	Rw5G035960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	174
Acc65I	GGTACC	1 cut(s)	670
AccB1I	GGYRCC	1 cut(s)	670
AccII	CGCG	2 cut(s)	546, 1575
AccIII	TCCGGA	1 cut(s)	1439
AciI	CCGC	7 cut(s)	546, 575, 1483, 1652, 1657, 1788, 1803
AclWI	GGATC	6 cut(s)	360, 1211, 1327, 1537, 1776, 1789
AcsI	RAATTY	1 cut(s)	1384
AcuI	CTGAAG	3 cut(s)	204, 798, 1503
AfaI	GTAC	5 cut(s)	117, 672, 737, 1012, 1617
AfeI	AGCGCT	1 cut(s)	384
AfiI	CCNNNNNNNGG	3 cut(s)	443, 680, 1794
AflIII	ACRYGT	1 cut(s)	265
AgsI	TTSAA	8 cut(s)	391, 458, 638, 695, 1228, 1499, 1557, 1708
AhlI	ACTAGT	2 cut(s)	319, 1744
AjnI	CCWGG	4 cut(s)	442, 474, 1610, 1793
AleI	CACNNNNGTG	1 cut(s)	1456
Alw26I	GTCTC	3 cut(s)	204, 977, 1425
AlwI	GGATC	6 cut(s)	360, 1211, 1327, 1537, 1776, 1789
Ama87I	CYCGRG	1 cut(s)	804
Aor13HI	TCCGGA	1 cut(s)	1439
Aor51HI	AGCGCT	1 cut(s)	384
AoxI	GGCC	4 cut(s)	69, 285, 602, 1810
ApeKI	GCWGC	7 cut(s)	301, 364, 827, 857, 860, 1805, 1870
ApoI	RAATTY	1 cut(s)	1384
AscI	GGCGCGCC	1 cut(s)	1573
Asp700I	GAANNNNTTC	1 cut(s)	1447
Asp718I	GGTACC	1 cut(s)	670
AspLEI	GCGC	4 cut(s)	385, 585, 1575, 1577
AspS9I	GGNCC	4 cut(s)	434, 472, 602, 1811
AsuC2I	CCSGG	1 cut(s)	1815
AsuHPI	GGTGA	3 cut(s)	432, 1645, 1746
AsuII	TTCGAA	1 cut(s)	376
AvaI	CYCGRG	1 cut(s)	804
AvaII	GGWCC	2 cut(s)	434, 472
BamHI	GGATCC	1 cut(s)	1781
BanI	GGYRCC	1 cut(s)	670
BanII	GRGCYC	2 cut(s)	1611, 1645
BarI	GAAGNNNNNNTAC	2 cut(s)	1495, 1527
BbvCI	CCTCAGC	1 cut(s)	1416
BbvI	GCAGC	7 cut(s)	313, 376, 814, 847, 869, 1792, 1857
BccI	CCATC	8 cut(s)	238, 301, 554, 764, 962, 1678, 1691, 1837
BceAI	ACGGC	1 cut(s)	56
BcgI	CGANNNNNNTGC	4 cut(s)	356, 390, 1822, 1856
BciT130I	CCWGG	4 cut(s)	444, 476, 1612, 1795
BcnI	CCSGG	1 cut(s)	1815
BcoDI	GTCTC	3 cut(s)	204, 977, 1425
BcuI	ACTAGT	2 cut(s)	319, 1744
BfaI	CTAG	8 cut(s)	320, 978, 987, 1145, 1305, 1472, 1563, 1745
BfoI	RGCGCY	2 cut(s)	386, 586
BglII	AGATCT	1 cut(s)	1358
BisI	GCNGC	7 cut(s)	302, 365, 828, 858, 861, 1806, 1871
BlsI	GCNGC	7 cut(s)	303, 366, 829, 859, 862, 1807, 1872
Bme1390I	CCNGG	5 cut(s)	444, 476, 1612, 1795, 1815
Bme18I	GGWCC	2 cut(s)	434, 472
BmeT110I	CYCGRG	1 cut(s)	804
BmgT120I	GGNCC	4 cut(s)	434, 472, 602, 1811
BmiI	GGNNCC	4 cut(s)	672, 1783, 1813, 1819
BmrFI	CCNGG	5 cut(s)	444, 476, 1612, 1795, 1815
BmsI	GCATC	8 cut(s)	267, 351, 844, 992, 1064, 1667, 1759, 1830
BpmI	CTGGAG	1 cut(s)	465
Bpu10I	CCTNAGC	2 cut(s)	1416, 1424
Bpu14I	TTCGAA	1 cut(s)	376
BpuEI	CTTGAG	3 cut(s)	572, 1046, 1118
BpuMI	CCSGG	1 cut(s)	1815
BsaBI	GATNNNNATC	1 cut(s)	507
BsaI	GGTCTC	1 cut(s)	977
BsaJI	CCNNGG	5 cut(s)	700, 1489, 1610, 1611, 1813
BsaWI	WCCGGW	2 cut(s)	1030, 1439
Bsc4I	CCNNNNNNNGG	3 cut(s)	443, 680, 1794
Bse1I	ACTGG	2 cut(s)	19, 1114
Bse8I	GATNNNNATC	1 cut(s)	507
BseAI	TCCGGA	1 cut(s)	1439
BseBI	CCWGG	4 cut(s)	444, 476, 1612, 1795
BseDI	CCNNGG	5 cut(s)	700, 1489, 1610, 1611, 1813
BseGI	GGATG	3 cut(s)	775, 916, 1845
BseJI	GATNNNNATC	1 cut(s)	507
BseLI	CCNNNNNNNGG	3 cut(s)	443, 680, 1794
BseMII	CTCAG	8 cut(s)	137, 215, 608, 621, 705, 746, 1407, 1596
BseNI	ACTGG	2 cut(s)	19, 1114
BsePI	GCGCGC	1 cut(s)	1573
BseRI	GAGGAG	3 cut(s)	1433, 1810, 1849
BseXI	GCAGC	7 cut(s)	313, 376, 814, 847, 869, 1792, 1857
BseYI	CCCAGC	1 cut(s)	1648
BsgI	GTGCAG	1 cut(s)	327
Bsh1236I	CGCG	2 cut(s)	546, 1575
BshFI	GGCC	4 cut(s)	71, 287, 604, 1812
BshNI	GGYRCC	1 cut(s)	670
BsiHKCI	CYCGRG	1 cut(s)	804
BsiSI	CCGG	5 cut(s)	995, 1031, 1440, 1773, 1815
BslFI	GGGAC	1 cut(s)	1733
BslI	CCNNNNNNNGG	3 cut(s)	443, 680, 1794
BsmAI	GTCTC	3 cut(s)	204, 977, 1425
BsmFI	GGGAC	1 cut(s)	1733
BsmI	GAATGC	2 cut(s)	1008, 1286
BsnI	GGCC	4 cut(s)	71, 287, 604, 1812
Bso31I	GGTCTC	1 cut(s)	977
BsoBI	CYCGRG	1 cut(s)	804
Bsp119I	TTCGAA	1 cut(s)	376
Bsp1286I	GDGCHC	2 cut(s)	1611, 1645
Bsp13I	TCCGGA	1 cut(s)	1439
Bsp143I	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
Bsp19I	CCATGG	1 cut(s)	700
BspACI	CCGC	7 cut(s)	546, 575, 1483, 1652, 1657, 1788, 1803
BspANI	GGCC	4 cut(s)	71, 287, 604, 1812
BspCNI	CTCAG	8 cut(s)	136, 214, 607, 622, 706, 747, 1408, 1597
BspEI	TCCGGA	1 cut(s)	1439
BspFNI	CGCG	2 cut(s)	546, 1575
BspHI	TCATGA	1 cut(s)	312
BspLI	GGNNCC	4 cut(s)	672, 1783, 1813, 1819
BspPI	GGATC	6 cut(s)	360, 1211, 1327, 1537, 1776, 1789
BspQI	GCTCTTC	1 cut(s)	392
BspT104I	TTCGAA	1 cut(s)	376
BspT107I	GGYRCC	1 cut(s)	670
BspTNI	GGTCTC	1 cut(s)	977
BsrI	ACTGG	2 cut(s)	19, 1114
BssECI	CCNNGG	5 cut(s)	700, 1489, 1610, 1611, 1813
BssHII	GCGCGC	1 cut(s)	1573
BssMI	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
BssT1I	CCWWGG	1 cut(s)	700
Bst2UI	CCWGG	4 cut(s)	444, 476, 1612, 1795
Bst4CI	ACNGT	4 cut(s)	133, 642, 1594, 1727
Bst6I	CTCTTC	1 cut(s)	392
BstBI	TTCGAA	1 cut(s)	376
BstC8I	GCNNGC	7 cut(s)	237, 336, 924, 1376, 1575, 1645, 1810
BstDSI	CCRYGG	1 cut(s)	700
BstF5I	GGATG	3 cut(s)	775, 916, 1845
BstFNI	CGCG	2 cut(s)	546, 1575
BstH2I	RGCGCY	2 cut(s)	386, 586
BstHHI	GCGC	4 cut(s)	385, 585, 1575, 1577
BstKTI	GATC	8 cut(s)	355, 940, 1133, 1219, 1335, 1361, 1545, 1784
BstMAI	GTCTC	3 cut(s)	204, 977, 1425
BstMBI	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
BstMWI	GCNNNNNNNGC	6 cut(s)	102, 391, 824, 1271, 1491, 1649
BstNI	CCWGG	4 cut(s)	444, 476, 1612, 1795
BstNSI	RCATGY	3 cut(s)	239, 269, 1378
BstSCI	CCNGG	5 cut(s)	442, 474, 1610, 1793, 1813
BstUI	CGCG	2 cut(s)	546, 1575
BstV1I	GCAGC	7 cut(s)	313, 376, 814, 847, 869, 1792, 1857
BstX2I	RGATCY	4 cut(s)	352, 1332, 1358, 1781
BstXI	CCANNNNNNTGG	1 cut(s)	1727
BstYI	RGATCY	4 cut(s)	352, 1332, 1358, 1781
BsuRI	GGCC	4 cut(s)	71, 287, 604, 1812
BtgI	CCRYGG	1 cut(s)	700
BtsCI	GGATG	3 cut(s)	775, 916, 1845
BtsI	GCAGTG	1 cut(s)	1463
BtsIMutI	CAGTG	4 cut(s)	209, 1107, 1463, 1599
Cac8I	GCNNGC	7 cut(s)	237, 336, 924, 1376, 1575, 1645, 1810
CciI	TCATGA	1 cut(s)	312
CfoI	GCGC	4 cut(s)	385, 585, 1575, 1577
Cfr13I	GGNCC	4 cut(s)	434, 472, 602, 1811
Csp6I	GTAC	5 cut(s)	116, 671, 736, 1011, 1616
CviQI	GTAC	5 cut(s)	116, 671, 736, 1011, 1616
DpnI	GATC	8 cut(s)	354, 939, 1132, 1218, 1334, 1360, 1544, 1783
DpnII	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
Eam1104I	CTCTTC	1 cut(s)	392
EarI	CTCTTC	1 cut(s)	392
Eco130I	CCWWGG	1 cut(s)	700
Eco24I	GRGCYC	2 cut(s)	1611, 1645
Eco31I	GGTCTC	1 cut(s)	977
Eco47I	GGWCC	2 cut(s)	434, 472
Eco47III	AGCGCT	1 cut(s)	384
Eco57I	CTGAAG	3 cut(s)	204, 798, 1503
Eco88I	CYCGRG	1 cut(s)	804
EcoO109I	RGGNCCY	2 cut(s)	434, 602
EcoRII	CCWGG	4 cut(s)	442, 474, 1610, 1793
EcoT14I	CCWWGG	1 cut(s)	700
EcoT38I	GRGCYC	2 cut(s)	1611, 1645
ErhI	CCWWGG	1 cut(s)	700
FalI	AAGNNNNNCTT	2 cut(s)	1140, 1172
FaqI	GGGAC	1 cut(s)	1733
FauNDI	CATATG	1 cut(s)	1163
Fnu4HI	GCNGC	7 cut(s)	302, 365, 828, 858, 861, 1806, 1871
FokI	GGATG	3 cut(s)	782, 923, 1852
FriOI	GRGCYC	2 cut(s)	1611, 1645
Fsp4HI	GCNGC	7 cut(s)	302, 365, 828, 858, 861, 1806, 1871
FspBI	CTAG	8 cut(s)	320, 978, 987, 1145, 1305, 1472, 1563, 1745
GlaI	GCGC	4 cut(s)	384, 584, 1574, 1576
GluI	GCNGC	7 cut(s)	302, 365, 828, 858, 861, 1806, 1871
GsaI	CCCAGC	1 cut(s)	1652
GsuI	CTGGAG	1 cut(s)	465
HaeII	RGCGCY	2 cut(s)	386, 586
HaeIII	GGCC	4 cut(s)	71, 287, 604, 1812
HapII	CCGG	5 cut(s)	995, 1031, 1440, 1773, 1815
HhaI	GCGC	4 cut(s)	385, 585, 1575, 1577
Hin6I	GCGC	4 cut(s)	383, 583, 1573, 1575
HinP1I	GCGC	4 cut(s)	383, 583, 1573, 1575
HincII	GTYRAC	1 cut(s)	551
HindII	GTYRAC	1 cut(s)	551
HinfI	GANTC	5 cut(s)	188, 503, 592, 614, 1301
HpaII	CCGG	5 cut(s)	995, 1031, 1440, 1773, 1815
HphI	GGTGA	3 cut(s)	432, 1645, 1746
Hpy166II	GTNNAC	6 cut(s)	551, 1181, 1451, 1463, 1597, 1618
Hpy188I	TCNGA	8 cut(s)	52, 502, 597, 756, 778, 1069, 1522, 1582
Hpy8I	GTNNAC	6 cut(s)	551, 1181, 1451, 1463, 1597, 1618
HpyAV	CCTTC	4 cut(s)	228, 298, 447, 773
HpyCH4III	ACNGT	4 cut(s)	133, 642, 1594, 1727
HpyCH4IV	ACGT	2 cut(s)	1013, 1071
HpyF10VI	GCNNNNNNNGC	6 cut(s)	102, 391, 824, 1271, 1491, 1649
HpySE526I	ACGT	2 cut(s)	1013, 1071
HspAI	GCGC	4 cut(s)	383, 583, 1573, 1575
Kpn2I	TCCGGA	1 cut(s)	1439
KpnI	GGTACC	1 cut(s)	674
Kzo9I	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
LguI	GCTCTTC	1 cut(s)	392
LmnI	GCTCC	6 cut(s)	446, 824, 868, 1420, 1775, 1823
Lsp1109I	GCAGC	7 cut(s)	313, 376, 814, 847, 869, 1792, 1857
LweI	GCATC	8 cut(s)	267, 351, 844, 992, 1064, 1667, 1759, 1830
MaeI	CTAG	8 cut(s)	320, 978, 987, 1145, 1305, 1472, 1563, 1745
MaeII	ACGT	2 cut(s)	1013, 1071
MaeIII	GTNAC	1 cut(s)	127
MalI	GATC	8 cut(s)	354, 939, 1132, 1218, 1334, 1360, 1544, 1783
MboI	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
MboII	GAAGA	8 cut(s)	365, 379, 896, 1085, 1160, 1256, 1259, 1520
MfeI	CAATTG	2 cut(s)	813, 1041
MflI	RGATCY	4 cut(s)	352, 1332, 1358, 1781
MhlI	GDGCHC	2 cut(s)	1611, 1645
MluCI	AATT	6 cut(s)	450, 458, 813, 916, 1041, 1384
MlyI	GAGTC	1 cut(s)	586
MmeI	TCCRAC	1 cut(s)	1027
MroI	TCCGGA	1 cut(s)	1439
MroXI	GAANNNNTTC	1 cut(s)	1447
MseI	TTAA	6 cut(s)	44, 579, 626, 959, 1407, 1689
MslI	CAYNNNNRTG	5 cut(s)	270, 663, 882, 1456, 1675
MspA1I	CMGCKG	4 cut(s)	304, 860, 1652, 1805
MspI	CCGG	5 cut(s)	995, 1031, 1440, 1773, 1815
MspR9I	CCNGG	5 cut(s)	444, 476, 1612, 1795, 1815
MunI	CAATTG	2 cut(s)	813, 1041
Mva1269I	GAATGC	2 cut(s)	1008, 1286
MvaI	CCWGG	4 cut(s)	444, 476, 1612, 1795
MvnI	CGCG	2 cut(s)	546, 1575
MwoI	GCNNNNNNNGC	6 cut(s)	102, 391, 824, 1271, 1491, 1649
NciI	CCSGG	1 cut(s)	1815
NcoI	CCATGG	1 cut(s)	700
NdeI	CATATG	1 cut(s)	1163
NdeII	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
NlaIV	GGNNCC	4 cut(s)	672, 1783, 1813, 1819
NmeAIII	GCCGAG	2 cut(s)	660, 1470
NspI	RCATGY	3 cut(s)	239, 269, 1378
NspV	TTCGAA	1 cut(s)	376
OliI	CACNNNNGTG	1 cut(s)	1456
PaeI	GCATGC	2 cut(s)	239, 1378
PaeR7I	CTCGAG	1 cut(s)	804
PagI	TCATGA	1 cut(s)	312
PalAI	GGCGCGCC	1 cut(s)	1573
PasI	CCCWGGG	1 cut(s)	1611
PauI	GCGCGC	1 cut(s)	1573
PciI	ACATGT	1 cut(s)	265
PciSI	GCTCTTC	1 cut(s)	392
PctI	GAATGC	2 cut(s)	1008, 1286
PdmI	GAANNNNTTC	1 cut(s)	1447
PfeI	GAWTC	4 cut(s)	188, 503, 614, 1301
PkrI	GCNGC	7 cut(s)	303, 366, 829, 859, 862, 1807, 1872
PleI	GAGTC	1 cut(s)	586
PpsI	GAGTC	1 cut(s)	586
PpuMI	RGGWCCY	1 cut(s)	434
PscI	ACATGT	1 cut(s)	265
PsiI	TTATAA	1 cut(s)	174
Psp5II	RGGWCCY	1 cut(s)	434
Psp6I	CCWGG	4 cut(s)	442, 474, 1610, 1793
PspFI	CCCAGC	1 cut(s)	1648
PspGI	CCWGG	4 cut(s)	442, 474, 1610, 1793
PspN4I	GGNNCC	4 cut(s)	672, 1783, 1813, 1819
PspPI	GGNCC	4 cut(s)	434, 472, 602, 1811
PspPPI	RGGWCCY	1 cut(s)	434
PspXI	VCTCGAGB	1 cut(s)	804
PsuI	RGATCY	4 cut(s)	352, 1332, 1358, 1781
PteI	GCGCGC	1 cut(s)	1573
PvuII	CAGCTG	2 cut(s)	304, 860
RsaI	GTAC	5 cut(s)	117, 672, 737, 1012, 1617
RsaNI	GTAC	5 cut(s)	116, 671, 736, 1011, 1616
RseI	CAYNNNNRTG	5 cut(s)	270, 663, 882, 1456, 1675
SapI	GCTCTTC	1 cut(s)	392
SaqAI	TTAA	6 cut(s)	44, 579, 626, 959, 1407, 1689
SatI	GCNGC	7 cut(s)	302, 365, 828, 858, 861, 1806, 1871
Sau3AI	GATC	8 cut(s)	352, 937, 1130, 1216, 1332, 1358, 1542, 1781
Sau96I	GGNCC	4 cut(s)	434, 472, 602, 1811
SchI	GAGTC	1 cut(s)	586
ScrFI	CCNGG	5 cut(s)	444, 476, 1612, 1795, 1815
SduI	GDGCHC	2 cut(s)	1611, 1645
SfaNI	GCATC	8 cut(s)	267, 351, 844, 992, 1064, 1667, 1759, 1830
Sfr274I	CTCGAG	1 cut(s)	804
SfuI	TTCGAA	1 cut(s)	376
SgsI	GGCGCGCC	1 cut(s)	1573
SinI	GGWCC	2 cut(s)	434, 472
SlaI	CTCGAG	1 cut(s)	804
SmiMI	CAYNNNNRTG	5 cut(s)	270, 663, 882, 1456, 1675
SmlI	CTYRAG	4 cut(s)	587, 804, 1061, 1097
SmoI	CTYRAG	4 cut(s)	587, 804, 1061, 1097
SpeI	ACTAGT	2 cut(s)	319, 1744
SphI	GCATGC	2 cut(s)	239, 1378
Sse9I	AATT	6 cut(s)	450, 458, 813, 916, 1041, 1384
SsiI	CCGC	7 cut(s)	546, 575, 1483, 1652, 1657, 1788, 1803
SspMI	CTAG	8 cut(s)	320, 978, 987, 1145, 1305, 1472, 1563, 1745
StyD4I	CCNGG	5 cut(s)	442, 474, 1610, 1793, 1813
StyI	CCWWGG	1 cut(s)	700
TaaI	ACNGT	4 cut(s)	133, 642, 1594, 1727
TaiI	ACGT	2 cut(s)	1016, 1074
TaqI	TCGA	4 cut(s)	186, 376, 805, 1832
TasI	AATT	6 cut(s)	450, 458, 813, 916, 1041, 1384
TatI	WGTACW	2 cut(s)	115, 735
TfiI	GAWTC	4 cut(s)	188, 503, 614, 1301
Tru1I	TTAA	6 cut(s)	44, 579, 626, 959, 1407, 1689
Tru9I	TTAA	6 cut(s)	44, 579, 626, 959, 1407, 1689
TscAI	CASTG	4 cut(s)	209, 1114, 1470, 1599
TseI	GCWGC	7 cut(s)	301, 364, 827, 857, 860, 1805, 1870
TspDTI	ATGAA	7 cut(s)	153, 453, 644, 755, 927, 1602, 1725
TspRI	CASTG	4 cut(s)	209, 1114, 1470, 1599
VpaK11BI	GGWCC	2 cut(s)	434, 472
XapI	RAATTY	1 cut(s)	1384
XbaI	TCTAGA	1 cut(s)	1304
XceI	RCATGY	3 cut(s)	239, 269, 1378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1656
XhoI	CTCGAG	1 cut(s)	804
XmnI	GAANNNNTTC	1 cut(s)	1447
XspI	CTAG	8 cut(s)	320, 978, 987, 1145, 1305, 1472, 1563, 1745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.