Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002472

Physical Location & Seq

Genomic Coordinates Reverse (-)

37493642 .. 37500312

Gene Structure 6671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0315700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3477 bp

ATGGCTGAAGTTGTGGGTGGAGCTTTTCTCTCTTCTGCTCTTGCTGTTCTGTTTGATAGGATGGCTTCCCGTCCGGTTCTTGACTTCATCCGAGGAAAGAAGAACACCACTGAGCTGCTCCGTAAGTTGAAGATTAAGTTGCGGTCGGTTAATAAGTTGCTCGATGATGCAGAGGAGAAGCAACTCATCAAAGACTCTGGCGTCAGGGAATGGCTTAATGAGCTTAAAGATGTTCTCTATCATGCTGATGACCTGTTGGATGACATCAATACTGAAGCTCTGCGTTGCAAGATGGAACAAGAAGATTCTGGAAGCAGCAGCACAAATCAGGTACTGAACTCTAGTTCCATTTCCATTCATCAACTTGACGAAAGGATACAGGAGATTCTTGACGAATTAGAACTTATTGTCAATGAAAAAGATGTGCTTGATTTGAAAGAGGGTGTTAAGGCTAGGCCACAAGAAAGACTGCCTACAACTTCTTTGGTAGTAGAGTCTAGTGTATATGGAAGGGATGAAGAAAAGGAGGCCATTATCAAATTATTGTTAGCGGATGGTATGACTGGAAATAAGATAGATGTGCTTCCAATTGTGGGCATGGGTGGGCTTGGAAAGACCACTCTTGCTCAACTCGCATACAACGATGACAGAGTCAAGCGACATTTTGAGTATCAATCATGGTCTTGTATTTCTGTAGAATTTGATGTTATCAAAATAACACAGACAATTTATGGGGCGGTCACTTCACAAACTTGTAACATCACAGATCTAGACATGCTTCAAGTTGAACTAAAGAAGGCGTTGTCAGGGAAGAAATTTCTCTTTGTTCTTGATGATGTTTGGGATGTGAATTTAACGAAGTGGGATAGCTTGAGCCGACCCTTTGAGAGTGGAGGTCATGGAAGTAAGATCATTGTCACAACACGTGATGAAGGTGTCGCACGCAAGATGGGTACCCTTCAAAGTCAACATCTAATGCAACTAACAGAGGAAGACTGCTGGTCGTTGTTCTCAAAACATATCTTCTGGAATGGAGGAGATCCGTCGCTTGAAGTGATTGGAAAACAGATTGTTCAAAAGTGTAAAGGACTCCCTTTAGCTGCAAAATCACTTGGGGGTCTTTTACGTTCTGAACCGAGTATTGAAAAATGGAAAGAAATATTGAACAATGACATATGGGAGTCGCGGGATGAGGACAATGACATTTCGCCTGCTCTATGGTTGAGCTACCATTATCTACCTCCACATCTGAAGCGTTGTTTTGCTTACTGTTCCATATTTCCTCAAGATTATGAGTTTTACAAATCGAAGCTGGTTTTGTTGTGGATGGCTGAAGATCTCTTACCACTGAAAAGTCTGAAATCGAATACTACAATAGAAAAGTTTGGAGATAAGTGCTTTGATCATCTAGTGTCAAGGTCATTTTTTCATCTTGCACCAAATCAGTATCCTCTTGAGCCAACTTTCACAATGCATGACCTTATCCATGACTTAGCAAAGTTTGTCTCCGGAGAGTTTTGTGTTAGGTTGGAGGACAATGACTCAGTGCTGGAAAATGTTAGCAAGAGTCGTCACTTTTCGTGTGCAACCGGCAGTTTTGATCAATGGGACAGTTTGTATGAAGCCAAGTATTTGAGGACCTTTCTAGTATCAGGATATAAATGGGACCAACGTCCCAACTTAGATTTTGATATATTCTTGAAGCTTCAGTGTTTAAGAGTGCTCAATTTATCAAGTTACAATATTGGTGAGCTGCCTAGTTCAATTAGCAAGTTGAAGCATCTAAGGCACTTGGACTTGTCTGGCACATCAATTAAAAAGTTACCTGATGAAATGTGTACTTTATATAATTTACAGACGTTATTGTTGTCGTTTTGTAGCAATCTAGTTGAGTTGCCAACTGATTTGGGAAGATTAATCAACTTGCGTCATCTTGATCTCAGTGGCACTTGGATAAAAAAGATGCCACCAAGGATGGGCAAAATGAAAGATCTCCAAACATTAAGAGGTCGGTTTGTCCTAGACAAATACACTGGTGATAACATTGTGGAGATTAAAGAGCTTCAGCAGTTGCGCGGAACACTCTGGATCTCGGGGCTTCGCAATATTGTGCATGTCACAGATGCCATTATGAGAAAGAAGAAGCATCTGGATGAATTAGTTTTGGAATGGGGAGGCAAGTCTGGTGACACCGACGATACACAAAAACAGAGAGATGTGCTGGAGAACCTCCAACCTCATACAAACCTTAAAAAACTCGAGATTCGATCTTATGGGGGCACAAGATTTCCAGGTTGGTTGGAAGATCATTCTAGTTTATCTAATCTGGTTCGTCTTCAGCTTCTGGATTGCGGAAATTGTTTGTCCTTGCCATCAGTTGAGCAGCTACCCTCCCTCCAAGTGCTTGAGATTGAAGGATTAATTAATGGAGTGGTGACTTGGGGTTCCAAGCCTTTTCCAAATCTTCGTACGCTGAGTCTGAAATCTTGTCCCGAGGTAACCGGGGCATTCACGTCAGCCTGCTTCCCAAAGCTTGAAAGCCTCAAATGGGAGGATGTGAATGTAGAATCTCTTAATTACCCTTCACTCCTCTCCCTTGTCCGACTTGAAATAATTTCATGCCCCAATTTTGTTTGTTTTCCCGATGCGCCCAATTTGAAGACCTTACTTGTCCAAAAATGTCCGAAACTGAGGTCATTGCCACAACACATGCACAACCTTCTCCCATCTCTCGAGCACTTGTATTTATCTGATTGTCCAGAATTGGAATCATTTCCCGAAGGGGGATTGCCGTCTAAGTTGGAAAACTTGTACATCTGGCGTTGCAAGAAACTCCTGATTGGAAACCGTATGCAGTGGGGTCTACCAACACTCACCTCTCTCAAAATCTTGTGGGTCGACTTTCGGGGATGTGAACAAGTTGTAGATTCATTTCCAGACGAGGGGCTGCTGCCCACCACTCTCGGAAAACTCGGGATCTACAGTATTTCAAAGCTGGACGACAAGGGGTTTAGACAACTCACCTCTCTTAAAGAGTTGACAATTGGCCATTGCCCAGAACTCCGTCATCTCGGAATGAATAAGCTCTCAGGCACAATTCCATCAAAGCTTTTTAGCTTAAACATGAGCCTGATACATGTGCTCTTCGAAAGTAATCAACTCATTGGCAGCATCCCTTCCAGCCTTGGACTTGTAAAGTCTTTGGAGGTTGTGCGATTTGATAGAAACATGTTAACTGGGCCTATTCCTCTGAGCCTCTACAGTCTTACAAATGTCTCTCAGCTATTCTTGTCTAATAACAAGCTAAGCGGCCCTGCTCCCAACCTTACTGGCATGAACCTTCTCCATTATGTGCAAGTTACAAATAATGGAGAAGAATATGCAAAAGAGAAATCAGGTGACAAGTCTGCACAGAAGGCTGCAATTAAGGCTTACAAAAAATCAAAGAATTCTGATGCTGCACATCAGGATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009888 GO:0009987 GO:0010008 GO:0010087 GO:0010089 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0031090 GO:0031410 GO:0031982 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0097708 GO:0098588 GO:0098805 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

1158

Amino Acids

131.02

Weight (kDa)

6.31

Isoelectric Point (pI)

43.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	9 - 102	6e-18	Rx N-terminal domain
NB-ARC	PF00931	173 - 342	1.2e-36	NB-ARC domain
WHD_DRP	PF23559	426 - 499	4.5e-21	Disease resistance protein Winged helix domain
LRR_14	PF23598	524 - 624	1.4e-12	Leucine-rich repeat region
LRR_14	PF23598	568 - 859	3e-30	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	682 - 806	5.2e-37	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002472)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28250 AT2G28250 AT2G28250 AT2G28250 AT2G28250 AT2G28250
fragaria_vesca	FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760 FvH4_3g31760
malus_domestica	MD03G1120900.v1.1 MD11G1139700.v1.1
prunus_persica	Prupe.6G104400_v2.0.a1
pyrus_communis	pycom11g11530
rosa_chinensis	RchiOBHm_Chr5g0058481
rosa_laevigata	RLG00000035227
rosa_multiflora	Rmu_sc0000367.1_g000133
rosa_roxburghii	Rroxscaffold_1G00022020
rosa_rugosa	Rorug05G0315400 Rorug05G0315400 Rorug05G0315400 Rorug05G0315500 Rorug05G0315600 Rorug05G0315700
rosa_samantha	Rh5AG381600 Rh5BG393200 Rh5CG417400 Rh5DG408600
rosa_wichuraiana	Rw5G035960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	200
Acc65I	GGTACC	1 cut(s)	953
AccB1I	GGYRCC	1 cut(s)	953
AccI	GTMKAC	2 cut(s)	2863, 2898
AccII	CGCG	2 cut(s)	1186, 2076
AccIII	TCCGGA	1 cut(s)	1508
AciI	CCGC	7 cut(s)	142, 551, 737, 1186, 2076, 2352, 3309
AclWI	GGATC	3 cut(s)	1034, 2096, 2984
AcoI	YGGCCR	1 cut(s)	3046
AcsI	RAATTY	4 cut(s)	698, 815, 850, 3448
AcuI	CTGAAG	7 cut(s)	27, 294, 1271, 1353, 1691, 2048, 2321
AcvI	CACGTG	1 cut(s)	926
AcyI	GRCGYC	1 cut(s)	201
AfaI	GTAC	5 cut(s)	333, 955, 1840, 2470, 2813
AfiI	CCNNNNNNNGG	5 cut(s)	593, 1976, 2548, 2783, 2942
AflIII	ACRYGT	3 cut(s)	923, 3136, 3228
AhdI	GACNNNNNGTC	1 cut(s)	1000
AjiI	CACGTC	1 cut(s)	2514
AjnI	CCWGG	1 cut(s)	2290
AloI	GAACNNNNNNTCC	2 cut(s)	329, 361
Alw21I	GWGCWC	3 cut(s)	1725, 2739, 3144
Alw26I	GTCTC	2 cut(s)	1510, 3280
AlwI	GGATC	3 cut(s)	1034, 2096, 2984
AlwNI	CAGNNNCTG	2 cut(s)	334, 2344
Ama87I	CYCGRG	5 cut(s)	2092, 2258, 2492, 2732, 2972
Aor13HI	TCCGGA	1 cut(s)	1508
AoxI	GGCC	5 cut(s)	455, 528, 3046, 3239, 3310
ApoI	RAATTY	4 cut(s)	698, 815, 850, 3448
ArsI	GACNNNNNNTTYG	2 cut(s)	2678, 2710
AseI	ATTAAT	3 cut(s)	1916, 2420, 2424
Asp700I	GAANNNNTTC	1 cut(s)	2772
Asp718I	GGTACC	1 cut(s)	953
AspLEI	GCGC	2 cut(s)	2076, 2650
AspS9I	GGNCC	4 cut(s)	1638, 1666, 3239, 3311
AsuC2I	CCSGG	1 cut(s)	2503
AsuHPI	GGTGA	7 cut(s)	1760, 2048, 2198, 2446, 2866, 3013, 3410
AsuII	TTCGAA	1 cut(s)	3147
AvaI	CYCGRG	5 cut(s)	2092, 2258, 2492, 2732, 2972
AvaII	GGWCC	2 cut(s)	1638, 1666
BaeGI	GKGCMC	1 cut(s)	2282
BalI	TGGCCA	1 cut(s)	3048
BanI	GGYRCC	1 cut(s)	953
BarI	GAAGNNNNNNTAC	2 cut(s)	1326, 1358
BbrPI	CACGTG	1 cut(s)	926
BbsI	GAAGAC	3 cut(s)	999, 2327, 2666
Bbv12I	GWGCWC	3 cut(s)	1725, 2739, 3144
BccI	CCATC	9 cut(s)	55, 286, 548, 943, 1321, 1969, 2380, 2734, 3109
BceAI	ACGGC	1 cut(s)	2776
BciT130I	CCWGG	1 cut(s)	2292
BciVI	GTATCC	2 cut(s)	369, 1458
BclI	TGATCA	2 cut(s)	1402, 1600
BcnI	CCSGG	1 cut(s)	2503
BcoDI	GTCTC	2 cut(s)	1510, 3280
BfmI	CTRYAG	3 cut(s)	693, 2980, 3259
BfuI	GTATCC	2 cut(s)	369, 1458
BglII	AGATCT	3 cut(s)	766, 1336, 1990
BlpI	GCTNAGC	1 cut(s)	3305
Bme1390I	CCNGG	2 cut(s)	2292, 2503
Bme18I	GGWCC	2 cut(s)	1638, 1666
BmeRI	GACNNNNNGTC	1 cut(s)	1000
BmeT110I	CYCGRG	5 cut(s)	2092, 2258, 2492, 2732, 2972
BmgBI	CACGTC	1 cut(s)	2514
BmgT120I	GGNCC	4 cut(s)	1638, 1666, 3239, 3311
BmiI	GGNNCC	3 cut(s)	955, 1667, 2446
BmrFI	CCNGG	2 cut(s)	2292, 2503
BmrI	ACTGGG	1 cut(s)	3246
BmsI	GCATC	8 cut(s)	157, 1789, 1953, 2113, 2155, 2635, 3180, 3445
BmuI	ACTGGG	1 cut(s)	3246
BoxI	GACNNNNGTC	1 cut(s)	1671
BpiI	GAAGAC	3 cut(s)	999, 2327, 2666
BplI	GAGNNNNNCTC	2 cut(s)	12, 44
BpmI	CTGGAG	1 cut(s)	2243
Bpu1102I	GCTNAGC	1 cut(s)	3305
Bpu14I	TTCGAA	1 cut(s)	3147
BpuEI	CTTGAG	4 cut(s)	892, 1269, 1475, 2426
BpuMI	CCSGG	1 cut(s)	2503
BsaAI	YACGTR	1 cut(s)	926
BsaHI	GRCGYC	1 cut(s)	201
BsaJI	CCNNGG	5 cut(s)	91, 1970, 2493, 2502, 3184
BsaWI	WCCGGW	2 cut(s)	73, 1508
BsaXI	ACNNNNNCTCC	2 cut(s)	2379, 2409
Bsc4I	CCNNNNNNNGG	5 cut(s)	593, 1976, 2548, 2783, 2942
Bse118I	RCCGGY	1 cut(s)	1589
Bse1I	ACTGG	4 cut(s)	568, 2038, 3241, 3334
Bse3DI	GCAATG	2 cut(s)	2696, 3049
BseAI	TCCGGA	1 cut(s)	1508
BseBI	CCWGG	1 cut(s)	2292
BseDI	CCNNGG	5 cut(s)	91, 1970, 2493, 2502, 3184
BseLI	CCNNNNNNNGG	5 cut(s)	593, 1976, 2548, 2783, 2942
BseMI	GCAATG	2 cut(s)	2696, 3049
BseMII	CTCAG	8 cut(s)	102, 1557, 1954, 2465, 2681, 3102, 3242, 3293
BseNI	ACTGG	4 cut(s)	568, 2038, 3241, 3334
BseRI	GAGGAG	3 cut(s)	188, 1050, 2579
BseSI	GKGCMC	1 cut(s)	2282
BsgI	GTGCAG	2 cut(s)	3393, 3444
Bsh1236I	CGCG	2 cut(s)	1186, 2076
Bsh1285I	CGRYCG	1 cut(s)	146
BshFI	GGCC	5 cut(s)	457, 530, 3048, 3241, 3312
BshNI	GGYRCC	1 cut(s)	953
BsiEI	CGRYCG	1 cut(s)	146
BsiHKAI	GWGCWC	3 cut(s)	1725, 2739, 3144
BsiHKCI	CYCGRG	5 cut(s)	2092, 2258, 2492, 2732, 2972
BsiSI	CCGG	4 cut(s)	74, 1509, 1590, 2502
BsiWI	CGTACG	1 cut(s)	2468
BslFI	GGGAC	4 cut(s)	1622, 1659, 1679, 2475
BslI	CCNNNNNNNGG	5 cut(s)	593, 1976, 2548, 2783, 2942
BsmAI	GTCTC	2 cut(s)	1510, 3280
BsmFI	GGGAC	4 cut(s)	1622, 1659, 1679, 2475
BsmI	GAATGC	1 cut(s)	2507
BsnI	GGCC	5 cut(s)	457, 530, 3048, 3241, 3312
BsoBI	CYCGRG	5 cut(s)	2092, 2258, 2492, 2732, 2972
Bsp119I	TTCGAA	1 cut(s)	3147
Bsp1286I	GDGCHC	4 cut(s)	1725, 2282, 2739, 3144
Bsp13I	TCCGGA	1 cut(s)	1508
Bsp1407I	TGTACA	1 cut(s)	2811
Bsp1720I	GCTNAGC	1 cut(s)	3305
BspACI	CCGC	7 cut(s)	142, 551, 737, 1186, 2076, 2352, 3309
BspANI	GGCC	5 cut(s)	457, 530, 3048, 3241, 3312
BspCNI	CTCAG	8 cut(s)	103, 1556, 1953, 2466, 2682, 3101, 3243, 3292
BspEI	TCCGGA	1 cut(s)	1508
BspFNI	CGCG	2 cut(s)	1186, 2076
BspLI	GGNNCC	3 cut(s)	955, 1667, 2446
BspPI	GGATC	3 cut(s)	1034, 2096, 2984
BspQI	GCTCTTC	1 cut(s)	3149
BspT104I	TTCGAA	1 cut(s)	3147
BspT107I	GGYRCC	1 cut(s)	953
BsrDI	GCAATG	2 cut(s)	2696, 3049
BsrFI	RCCGGY	1 cut(s)	1589
BsrGI	TGTACA	1 cut(s)	2811
BsrI	ACTGG	4 cut(s)	568, 2038, 3241, 3334
BssAI	RCCGGY	1 cut(s)	1589
BssECI	CCNNGG	5 cut(s)	91, 1970, 2493, 2502, 3184
BssNI	GRCGYC	1 cut(s)	201
BssT1I	CCWWGG	2 cut(s)	1970, 3184
Bst2UI	CCWGG	1 cut(s)	2292
Bst4CI	ACNGT	5 cut(s)	1271, 1613, 2849, 2984, 3263
Bst6I	CTCTTC	2 cut(s)	37, 3149
BstACI	GRCGYC	1 cut(s)	201
BstAUI	TGTACA	1 cut(s)	2811
BstBAI	YACGTR	1 cut(s)	926
BstBI	TTCGAA	1 cut(s)	3147
BstC8I	GCNNGC	3 cut(s)	943, 1212, 2521
BstEII	GGTNACC	1 cut(s)	2497
BstFNI	CGCG	2 cut(s)	1186, 2076
BstHHI	GCGC	2 cut(s)	2076, 2650
BstMAI	GTCTC	2 cut(s)	1510, 3280
BstMCI	CGRYCG	1 cut(s)	146
BstMWI	GCNNNNNNNGC	5 cut(s)	220, 632, 1786, 3416, 3428
BstNI	CCWGG	1 cut(s)	2292
BstNSI	RCATGY	5 cut(s)	778, 2117, 2713, 3140, 3232
BstPAI	GACNNNNGTC	1 cut(s)	1671
BstPI	GGTNACC	1 cut(s)	2497
BstSCI	CCNGG	2 cut(s)	2290, 2501
BstSFI	CTRYAG	3 cut(s)	693, 2980, 3259
BstSLI	GKGCMC	1 cut(s)	2282
BstUI	CGCG	2 cut(s)	1186, 2076
BstV2I	GAAGAC	3 cut(s)	999, 2327, 2666
BstX2I	RGATCY	6 cut(s)	766, 1039, 1336, 1990, 2088, 2976
BstYI	RGATCY	6 cut(s)	766, 1039, 1336, 1990, 2088, 2976
BsuI	GTATCC	2 cut(s)	369, 1458
BsuRI	GGCC	5 cut(s)	457, 530, 3048, 3241, 3312
BtrI	CACGTC	1 cut(s)	2514
BtsI	GCAGTG	1 cut(s)	2861
BtsIMutI	CAGTG	7 cut(s)	108, 1346, 1551, 1715, 1948, 2031, 2861
Cac8I	GCNNGC	3 cut(s)	943, 1212, 2521
CaiI	CAGNNNCTG	2 cut(s)	334, 2344
CfoI	GCGC	2 cut(s)	2076, 2650
Cfr10I	RCCGGY	1 cut(s)	1589
Cfr13I	GGNCC	4 cut(s)	1638, 1666, 3239, 3311
CseI	GACGC	2 cut(s)	190, 1916
Csp6I	GTAC	5 cut(s)	332, 954, 1839, 2469, 2812
CviQI	GTAC	5 cut(s)	332, 954, 1839, 2469, 2812
DrdI	GACNNNNNNGTC	1 cut(s)	200
DriI	GACNNNNNGTC	1 cut(s)	1000
DseDI	GACNNNNNNGTC	1 cut(s)	200
EaeI	YGGCCR	1 cut(s)	3046
Eam1104I	CTCTTC	2 cut(s)	37, 3149
Eam1105I	GACNNNNNGTC	1 cut(s)	1000
EarI	CTCTTC	2 cut(s)	37, 3149
Eco130I	CCWWGG	2 cut(s)	1970, 3184
Eco47I	GGWCC	2 cut(s)	1638, 1666
Eco57I	CTGAAG	7 cut(s)	27, 294, 1271, 1353, 1691, 2048, 2321
Eco72I	CACGTG	1 cut(s)	926
Eco88I	CYCGRG	5 cut(s)	2092, 2258, 2492, 2732, 2972
Eco91I	GGTNACC	1 cut(s)	2497
EcoO109I	RGGNCCY	1 cut(s)	1638
EcoO65I	GGTNACC	1 cut(s)	2497
EcoRI	GAATTC	1 cut(s)	3448
EcoRII	CCWGG	1 cut(s)	2290
EcoT14I	CCWWGG	2 cut(s)	1970, 3184
EcoT22I	ATGCAT	1 cut(s)	1476
ErhI	CCWWGG	2 cut(s)	1970, 3184
FalI	AAGNNNNNCTT	2 cut(s)	411, 443
FaqI	GGGAC	4 cut(s)	1622, 1659, 1679, 2475
FauI	CCCGC	1 cut(s)	1179
FauNDI	CATATG	1 cut(s)	1175
FbaI	TGATCA	2 cut(s)	1402, 1600
FblI	GTMKAC	2 cut(s)	2863, 2898
GlaI	GCGC	2 cut(s)	2075, 2649
GsuI	CTGGAG	1 cut(s)	2243
HaeIII	GGCC	5 cut(s)	457, 530, 3048, 3241, 3312
HapII	CCGG	4 cut(s)	74, 1509, 1590, 2502
HgaI	GACGC	2 cut(s)	190, 1916
HhaI	GCGC	2 cut(s)	2076, 2650
Hin1I	GRCGYC	1 cut(s)	201
Hin6I	GCGC	2 cut(s)	2074, 2648
HinP1I	GCGC	2 cut(s)	2074, 2648
HincII	GTYRAC	4 cut(s)	968, 2899, 3039, 3234
HindII	GTYRAC	4 cut(s)	968, 2899, 3039, 3234
HindIII	AAGCTT	3 cut(s)	1703, 2531, 3107
HpaI	GTTAAC	1 cut(s)	3234
HpaII	CCGG	4 cut(s)	74, 1509, 1590, 2502
HphI	GGTGA	7 cut(s)	1760, 2048, 2198, 2446, 2866, 3013, 3410
Hpy166II	GTNNAC	7 cut(s)	968, 1839, 2864, 2899, 2915, 3039, 3234
Hpy8I	GTNNAC	7 cut(s)	968, 1839, 2864, 2899, 2915, 3039, 3234
Hpy99I	CGWCG	2 cut(s)	1048, 2198
HpyCH4III	ACNGT	5 cut(s)	1271, 1613, 2849, 2984, 3263
HpyCH4IV	ACGT	5 cut(s)	925, 1126, 1672, 1859, 2513
HpyF10VI	GCNNNNNNNGC	5 cut(s)	220, 632, 1786, 3416, 3428
HpySE526I	ACGT	5 cut(s)	925, 1126, 1672, 1859, 2513
Hsp92I	GRCGYC	1 cut(s)	201
HspAI	GCGC	2 cut(s)	2074, 2648
Kpn2I	TCCGGA	1 cut(s)	1508
KpnI	GGTACC	1 cut(s)	957
Ksp22I	TGATCA	2 cut(s)	1402, 1600
KspAI	GTTAAC	1 cut(s)	3234
LguI	GCTCTTC	1 cut(s)	3149
LmnI	GCTCC	3 cut(s)	20, 123, 3322
LweI	GCATC	8 cut(s)	157, 1789, 1953, 2113, 2155, 2635, 3180, 3445
MaeII	ACGT	5 cut(s)	925, 1126, 1672, 1859, 2513
MfeI	CAATTG	2 cut(s)	588, 3042
MflI	RGATCY	6 cut(s)	766, 1039, 1336, 1990, 2088, 2976
MhlI	GDGCHC	4 cut(s)	1725, 2282, 2739, 3144
MlsI	TGGCCA	1 cut(s)	3048
MluNI	TGGCCA	1 cut(s)	3048
MlyI	GAGTC	8 cut(s)	188, 503, 660, 1083, 1190, 1535, 1576, 2485
MmeI	TCCRAC	6 cut(s)	237, 1509, 2257, 2280, 2626, 2781
Mox20I	TGGCCA	1 cut(s)	3048
Mph1103I	ATGCAT	1 cut(s)	1476
MroI	TCCGGA	1 cut(s)	1508
MroXI	GAANNNNTTC	1 cut(s)	2772
MscI	TGGCCA	1 cut(s)	3048
MslI	CAYNNNNRTG	2 cut(s)	246, 2151
Msp20I	TGGCCA	1 cut(s)	3048
MspI	CCGG	4 cut(s)	74, 1509, 1590, 2502
MspR9I	CCNGG	2 cut(s)	2292, 2503
MunI	CAATTG	2 cut(s)	588, 3042
Mva1269I	GAATGC	1 cut(s)	2507
MvaI	CCWGG	1 cut(s)	2292
MvnI	CGCG	2 cut(s)	1186, 2076
MwoI	GCNNNNNNNGC	5 cut(s)	220, 632, 1786, 3416, 3428
NciI	CCSGG	1 cut(s)	2503
NdeI	CATATG	1 cut(s)	1175
NlaIV	GGNNCC	3 cut(s)	955, 1667, 2446
NmuCI	GTSAC	7 cut(s)	739, 916, 1571, 2116, 2186, 2434, 3398
NsiI	ATGCAT	1 cut(s)	1476
NspI	RCATGY	5 cut(s)	778, 2117, 2713, 3140, 3232
NspV	TTCGAA	1 cut(s)	3147
PacI	TTAATTAA	1 cut(s)	2424
PaeR7I	CTCGAG	2 cut(s)	2258, 2732
PciI	ACATGT	2 cut(s)	3136, 3228
PciSI	GCTCTTC	1 cut(s)	3149
PcsI	WCGNNNNNNNCGW	1 cut(s)	639
PctI	GAATGC	1 cut(s)	2507
PdmI	GAANNNNTTC	1 cut(s)	2772
PfeI	GAWTC	6 cut(s)	305, 385, 2263, 2567, 2768, 2927
Pfl23II	CGTACG	1 cut(s)	2468
PflFI	GACNNNGTC	1 cut(s)	650
PleI	GAGTC	8 cut(s)	188, 502, 659, 1083, 1189, 1535, 1575, 2484
PmaCI	CACGTG	1 cut(s)	926
PmlI	CACGTG	1 cut(s)	926
PpsI	GAGTC	8 cut(s)	188, 502, 659, 1083, 1189, 1535, 1575, 2484
Ppu21I	YACGTR	1 cut(s)	926
PpuMI	RGGWCCY	1 cut(s)	1638
PscI	ACATGT	2 cut(s)	3136, 3228
PshAI	GACNNNNGTC	1 cut(s)	1671
PshBI	ATTAAT	3 cut(s)	1916, 2420, 2424
Psp5II	RGGWCCY	1 cut(s)	1638
Psp6I	CCWGG	1 cut(s)	2290
PspCI	CACGTG	1 cut(s)	926
PspEI	GGTNACC	1 cut(s)	2497
PspGI	CCWGG	1 cut(s)	2290
PspLI	CGTACG	1 cut(s)	2468
PspN4I	GGNNCC	3 cut(s)	955, 1667, 2446
PspPI	GGNCC	4 cut(s)	1638, 1666, 3239, 3311
PspPPI	RGGWCCY	1 cut(s)	1638
PstNI	CAGNNNCTG	2 cut(s)	334, 2344
PsuI	RGATCY	6 cut(s)	766, 1039, 1336, 1990, 2088, 2976
PsyI	GACNNNGTC	1 cut(s)	650
RsaI	GTAC	5 cut(s)	333, 955, 1840, 2470, 2813
RsaNI	GTAC	5 cut(s)	332, 954, 1839, 2469, 2812
RseI	CAYNNNNRTG	2 cut(s)	246, 2151
SalI	GTCGAC	1 cut(s)	2897
SapI	GCTCTTC	1 cut(s)	3149
Sau96I	GGNCC	4 cut(s)	1638, 1666, 3239, 3311
SchI	GAGTC	8 cut(s)	188, 503, 660, 1083, 1190, 1535, 1576, 2485
ScrFI	CCNGG	2 cut(s)	2292, 2503
SduI	GDGCHC	4 cut(s)	1725, 2282, 2739, 3144
SfaNI	GCATC	8 cut(s)	157, 1789, 1953, 2113, 2155, 2635, 3180, 3445
SfcI	CTRYAG	3 cut(s)	693, 2980, 3259
Sfr274I	CTCGAG	2 cut(s)	2258, 2732
SfuI	TTCGAA	1 cut(s)	3147
SinI	GGWCC	2 cut(s)	1638, 1666
SlaI	CTCGAG	2 cut(s)	2258, 2732
SmiMI	CAYNNNNRTG	2 cut(s)	246, 2151
SmlI	CTYRAG	6 cut(s)	871, 1284, 1454, 2258, 2405, 2732
SmoI	CTYRAG	6 cut(s)	871, 1284, 1454, 2258, 2405, 2732
SsiI	CCGC	7 cut(s)	142, 551, 737, 1186, 2076, 2352, 3309
SspI	AATATT	3 cut(s)	1161, 1744, 2107
StyD4I	CCNGG	2 cut(s)	2290, 2501
StyI	CCWWGG	2 cut(s)	1970, 3184
TaaI	ACNGT	5 cut(s)	1271, 1613, 2849, 2984, 3263
TaiI	ACGT	5 cut(s)	928, 1129, 1675, 1862, 2516
TaqI	TCGA	8 cut(s)	162, 1307, 1364, 2259, 2266, 2733, 2898, 3147
TatI	WGTACW	2 cut(s)	1838, 2811
TauI	GCSGC	1 cut(s)	3312
TfiI	GAWTC	6 cut(s)	305, 385, 2263, 2567, 2768, 2927
TscAI	CASTG	7 cut(s)	115, 1353, 1551, 1715, 1948, 2038, 2861
TseFI	GTSAC	7 cut(s)	739, 916, 1571, 2116, 2186, 2434, 3398
Tsp45I	GTSAC	7 cut(s)	739, 916, 1571, 2116, 2186, 2434, 3398
TspGWI	ACGGA	3 cut(s)	110, 1032, 3053
TspRI	CASTG	7 cut(s)	115, 1353, 1551, 1715, 1948, 2038, 2861
Tth111I	GACNNNGTC	1 cut(s)	650
VpaK11BI	GGWCC	2 cut(s)	1638, 1666
VspI	ATTAAT	3 cut(s)	1916, 2420, 2424
XapI	RAATTY	4 cut(s)	698, 815, 850, 3448
XbaI	TCTAGA	1 cut(s)	769
XceI	RCATGY	5 cut(s)	778, 2117, 2713, 3140, 3232
XhoI	CTCGAG	2 cut(s)	2258, 2732
XmiI	GTMKAC	2 cut(s)	2863, 2898
XmnI	GAANNNNTTC	1 cut(s)	2772
Zsp2I	ATGCAT	1 cut(s)	1476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.