Rh5AG381600

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
65524120 .. 65528439
4320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG381600.1

Sequence Viewer

Length: 1296 bp
ATGAAGTTCCAAGTGGGAGTTTCCCTTGCTTGTTTTATAAGTTTGATTGCGATTCAGCAAAGTCTCAGTGATGGTGTTTCCAATACTTCTGGTGTAACAGATTGGACATGTAGATGTTCTGTTTCATTTCAAGGAAACCAGAGCTATACTCTAGAATCAAACTGTTCAGCATCCTGTAATTGCAGTCAGGATGATGGAAGCAATAGCAAATGGACATGTATATGTGATGCCAATGGCCTTCCTAAAGTGGCAGCTGATGGTCATGATACTAGTTGCTTTACAGCCTGCAACTGCACTTCTGGATCTCTTGATGCAGCACAATCTTCGAAAAAGCGCTCTTCAAGCAAAGTTGTTGTGATTGTTCTTTTACTATGTGTCATACTTACAACTTTCGCTTTTCTTGCCTCGGTGGCATGCTACTTCTATCGAAGGGACAAGTGCACTGTTCACCCACCAATATTTTCATCAGATAAGGAAACGAGTTGCAACAGTGGTACCAACTTAATTAGCCATAGGAGTTCCTCAATGGTTGAGACCAAAATTTATATAAATTCCCCCATCAATCAAGGCATAGGGTGCTTTACCTCTTGCTTATTTGGAAGCAAAACAGGACCTTCACCTGGAGCAATTATTCAATTTTCATATTTGGAGCTGGAAAATGCAACCAATAAGTTTTCAGATTCCAATCTGATAGGACTTGGAGGAAGTAGTTATGTTTATCGCGGTCAACTCAAAGATGGAAGTATTCTGGCGGTTAAGCGCCTTAAGACTCAGAAAGGGCCTGATATGGATTCTGTCTTTTTAACTGAGGCTACCCCTCGTTTACAGGATAGTAAGCGAGTAATTGCAGAGTTGCCTGATCCTGATTTGAATGGGAACTTCCCAGAAGAAGATATGCACATAATGGCTTACTTAGCAAAGGAATGCCTACTCTTAGACCCTGATTCTAGACCAACTATGAGTGAGGTTGTCCAAATCCTTTCTACTATTGCACCAGAGAGATCTAAAAGGAGAGGCATGCCTGTAAATTTGTTTCAGCACATGGGTCTTAAAGAAGCTGAGGAGCTAAGGCGAGACAAATCCGGAAAATGTTCACTTCGGTGTTCACTGCCACTAGATATTGACCGCAACCTCGGTGTTGAAAGAAGTGAAGATACCACTTCAGATAAATATATGGAAAGATTGATCCTCTTGACTTCAAACGCTAGGAGTTGGCGTGCCCCTGATGATGAAACAGTGGACTTGACTGAGCCCAGGTTCGAGTCATTTTCCATAGCAAATACTAAACCTGTATGA

Protein Analysis

431

Amino Acids

47.15

Weight (kDa)

5.86

Isoelectric Point (pI)

54.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 38
Acc65I GGTACC 1 cut(s) 494
AccB1I GGYRCC 1 cut(s) 494
AccII CGCG 1 cut(s) 723
AccIII TCCGGA 1 cut(s) 1082
AciI CCGC 3 cut(s) 723, 752, 1126
AclWI GGATC 3 cut(s) 310, 854, 1180
AcsI RAATTY 3 cut(s) 540, 550, 1027
AcuI CTGAAG 1 cut(s) 1146
AfaI GTAC 1 cut(s) 496
AfeI AGCGCT 1 cut(s) 335
AfiI CCNNNNNNNGG 1 cut(s) 620
AflII CTTAAG 1 cut(s) 764
AflIII ACRYGT 2 cut(s) 107, 215
AgsI TTSAA 6 cut(s) 131, 342, 635, 871, 1142, 1200
AhlI ACTAGT 1 cut(s) 269
AjnI CCWGG 2 cut(s) 619, 1253
AleI CACNNNNGTG 1 cut(s) 1099
AluBI AGCT 5 cut(s) 144, 254, 652, 1058, 1066
AluI AGCT 5 cut(s) 144, 254, 652, 1058, 1066
Alw21I GWGCWC 1 cut(s) 443
Alw26I GTCTC 3 cut(s) 68, 527, 1068
Alw44I GTGCAC 1 cut(s) 439
AlwI GGATC 3 cut(s) 310, 854, 1180
Aor13HI TCCGGA 1 cut(s) 1082
Aor51HI AGCGCT 1 cut(s) 335
AoxI GGCC 2 cut(s) 235, 779
ApaLI GTGCAC 1 cut(s) 439
ApeKI GCWGC 2 cut(s) 251, 314
ApoI RAATTY 3 cut(s) 540, 550, 1027
Asp700I GAANNNNTTC 1 cut(s) 1090
Asp718I GGTACC 1 cut(s) 494
AspLEI GCGC 2 cut(s) 336, 762
AspS9I GGNCC 2 cut(s) 611, 779
AsuHPI GGTGA 2 cut(s) 440, 609
AsuII TTCGAA 1 cut(s) 326
AvaII GGWCC 1 cut(s) 611
BaeGI GKGCMC 2 cut(s) 443, 1222
BaeI ACNNNNGTAYC 2 cut(s) 478, 511
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 1 cut(s) 1254
BarI GAAGNNNNNNTAC 2 cut(s) 1138, 1170
Bbv12I GWGCWC 1 cut(s) 443
BbvCI CCTCAGC 1 cut(s) 1059
BbvI GCAGC 2 cut(s) 263, 326
BccI CCATC 5 cut(s) 65, 188, 251, 566, 731
BcgI CGANNNNNNTGC 2 cut(s) 306, 340
BciT130I CCWGG 2 cut(s) 621, 1255
BcoDI GTCTC 3 cut(s) 68, 527, 1068
BcuI ACTAGT 1 cut(s) 269
BfaI CTAG 5 cut(s) 152, 270, 948, 1115, 1206
BfoI RGCGCY 2 cut(s) 337, 763
BfrI CTTAAG 1 cut(s) 764
BglI GCCNNNNNGGC 1 cut(s) 410
BglII AGATCT 1 cut(s) 1001
BisI GCNGC 2 cut(s) 252, 315
BlsI GCNGC 2 cut(s) 253, 316
Bme1390I CCNGG 2 cut(s) 621, 1255
Bme18I GGWCC 1 cut(s) 611
BmgT120I GGNCC 2 cut(s) 611, 779
BmiI GGNNCC 1 cut(s) 496
BmrFI CCNGG 2 cut(s) 621, 1255
BmsI GCATC 3 cut(s) 179, 217, 301
BplI GAGNNNNNCTC 2 cut(s) 133, 165
BpmI CTGGAG 1 cut(s) 642
Bpu10I CCTNAGC 2 cut(s) 1059, 1067
Bpu14I TTCGAA 1 cut(s) 326
BsaBI GATNNNNATC 1 cut(s) 684
BsaI GGTCTC 1 cut(s) 527
BsaJI CCNNGG 3 cut(s) 405, 1132, 1253
BsaWI WCCGGW 1 cut(s) 1082
BsaXI ACNNNNNCTCC 2 cut(s) 1201, 1231
Bsc4I CCNNNNNNNGG 1 cut(s) 620
Bse8I GATNNNNATC 1 cut(s) 684
BseAI TCCGGA 1 cut(s) 1082
BseBI CCWGG 2 cut(s) 621, 1255
BseDI CCNNGG 3 cut(s) 405, 1132, 1253
BseGI GGATG 2 cut(s) 170, 196
BseJI GATNNNNATC 1 cut(s) 684
BseLI CCNNNNNNNGG 1 cut(s) 620
BseMII CTCAG 5 cut(s) 79, 785, 798, 1050, 1239
BseRI GAGGAG 1 cut(s) 1076
BseSI GKGCMC 2 cut(s) 443, 1222
BseXI GCAGC 2 cut(s) 263, 326
BsgI GTGCAG 1 cut(s) 277
Bsh1236I CGCG 1 cut(s) 723
BshFI GGCC 2 cut(s) 237, 781
BshNI GGYRCC 1 cut(s) 494
BsiHKAI GWGCWC 1 cut(s) 443
BsiSI CCGG 1 cut(s) 1083
BslFI GGGAC 1 cut(s) 446
BslI CCNNNNNNNGG 1 cut(s) 620
BsmAI GTCTC 3 cut(s) 68, 527, 1068
BsmFI GGGAC 1 cut(s) 446
BsmI GAATGC 1 cut(s) 929
BsnI GGCC 2 cut(s) 237, 781
Bso31I GGTCTC 1 cut(s) 527
Bsp119I TTCGAA 1 cut(s) 326
Bsp1286I GDGCHC 3 cut(s) 443, 1222, 1254
Bsp13I TCCGGA 1 cut(s) 1082
Bsp143I GATC 4 cut(s) 302, 859, 1001, 1185
BspACI CCGC 3 cut(s) 723, 752, 1126
BspANI GGCC 2 cut(s) 237, 781
BspCNI CTCAG 5 cut(s) 78, 784, 799, 1051, 1240
BspEI TCCGGA 1 cut(s) 1082
BspFNI CGCG 1 cut(s) 723
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 1 cut(s) 496
BspPI GGATC 3 cut(s) 310, 854, 1180
BspQI GCTCTTC 1 cut(s) 343
BspT104I TTCGAA 1 cut(s) 326
BspT107I GGYRCC 1 cut(s) 494
BspTI CTTAAG 1 cut(s) 764
BspTNI GGTCTC 1 cut(s) 527
BssECI CCNNGG 3 cut(s) 405, 1132, 1253
BssMI GATC 4 cut(s) 302, 859, 1001, 1185
Bst2UI CCWGG 2 cut(s) 621, 1255
Bst4CI ACNGT 4 cut(s) 164, 445, 491, 1237
Bst6I CTCTTC 1 cut(s) 343
BstAFI CTTAAG 1 cut(s) 764
BstAPI GCANNNNNTGC 1 cut(s) 576
BstBI TTCGAA 1 cut(s) 326
BstC8I GCNNGC 4 cut(s) 286, 415, 1019, 1218
BstDEI CTNAG 8 cut(s) 65, 771, 807, 913, 934, 1059, 1067, 1248
BstF5I GGATG 2 cut(s) 170, 196
BstFNI CGCG 1 cut(s) 723
BstH2I RGCGCY 2 cut(s) 337, 763
BstHHI GCGC 2 cut(s) 336, 762
BstKTI GATC 4 cut(s) 305, 862, 1004, 1188
BstMAI GTCTC 3 cut(s) 68, 527, 1068
BstMBI GATC 4 cut(s) 302, 859, 1001, 1185
BstMWI GCNNNNNNNGC 5 cut(s) 342, 401, 410, 576, 914
BstNI CCWGG 2 cut(s) 621, 1255
BstNSI RCATGY 4 cut(s) 111, 219, 417, 1021
BstSCI CCNGG 2 cut(s) 619, 1253
BstSLI GKGCMC 2 cut(s) 443, 1222
BstUI CGCG 1 cut(s) 723
BstV1I GCAGC 2 cut(s) 263, 326
BstX2I RGATCY 2 cut(s) 302, 1001
BstYI RGATCY 2 cut(s) 302, 1001
BsuRI GGCC 2 cut(s) 237, 781
BtsCI GGATG 2 cut(s) 170, 196
BtsI GCAGTG 1 cut(s) 1106
BtsIMutI CAGTG 5 cut(s) 73, 441, 496, 1106, 1242
Cac8I GCNNGC 4 cut(s) 286, 415, 1019, 1218
CciI TCATGA 1 cut(s) 262
CfoI GCGC 2 cut(s) 336, 762
Cfr13I GGNCC 2 cut(s) 611, 779
Csp6I GTAC 1 cut(s) 495
CviAII CATG 6 cut(s) 108, 216, 263, 414, 1018, 1042
CviQI GTAC 1 cut(s) 495
DdeI CTNAG 8 cut(s) 65, 771, 807, 913, 934, 1059, 1067, 1248
DpnI GATC 4 cut(s) 304, 861, 1003, 1187
DpnII GATC 4 cut(s) 302, 859, 1001, 1185
Eam1104I CTCTTC 1 cut(s) 343
EarI CTCTTC 1 cut(s) 343
Eco24I GRGCYC 1 cut(s) 1254
Eco31I GGTCTC 1 cut(s) 527
Eco47I GGWCC 1 cut(s) 611
Eco47III AGCGCT 1 cut(s) 335
Eco57I CTGAAG 1 cut(s) 1146
EcoO109I RGGNCCY 2 cut(s) 611, 779
EcoRII CCWGG 2 cut(s) 619, 1253
EcoT38I GRGCYC 1 cut(s) 1254
FaeI CATG 6 cut(s) 111, 219, 266, 417, 1021, 1045
FaqI GGGAC 1 cut(s) 446
FatI CATG 6 cut(s) 107, 215, 262, 413, 1017, 1041
Fnu4HI GCNGC 2 cut(s) 252, 315
FokI GGATG 2 cut(s) 157, 203
FriOI GRGCYC 1 cut(s) 1254
Fsp4HI GCNGC 2 cut(s) 252, 315
FspBI CTAG 5 cut(s) 152, 270, 948, 1115, 1206
GlaI GCGC 2 cut(s) 335, 761
GluI GCNGC 2 cut(s) 252, 315
GsuI CTGGAG 1 cut(s) 642
HaeII RGCGCY 2 cut(s) 337, 763
HaeIII GGCC 2 cut(s) 237, 781
HapII CCGG 1 cut(s) 1083
HhaI GCGC 2 cut(s) 336, 762
Hin1II CATG 6 cut(s) 111, 219, 266, 417, 1021, 1045
Hin6I GCGC 2 cut(s) 334, 760
HinP1I GCGC 2 cut(s) 334, 760
HincII GTYRAC 1 cut(s) 728
HindII GTYRAC 1 cut(s) 728
HinfI GANTC 7 cut(s) 52, 155, 680, 769, 791, 944, 1262
HpaII CCGG 1 cut(s) 1083
HphI GGTGA 2 cut(s) 440, 609
Hpy166II GTNNAC 7 cut(s) 441, 448, 728, 824, 1094, 1106, 1240
Hpy188I TCNGA 5 cut(s) 469, 679, 690, 774, 1165
Hpy188III TCNNGA 9 cut(s) 152, 188, 263, 300, 308, 863, 948, 1083, 1192
Hpy8I GTNNAC 7 cut(s) 441, 448, 728, 824, 1094, 1106, 1240
HpyAV CCTTC 3 cut(s) 248, 423, 624
HpyCH4III ACNGT 4 cut(s) 164, 445, 491, 1237
HpyF10VI GCNNNNNNNGC 5 cut(s) 342, 401, 410, 576, 914
HpyF3I CTNAG 8 cut(s) 65, 771, 807, 913, 934, 1059, 1067, 1248
Hsp92II CATG 6 cut(s) 111, 219, 266, 417, 1021, 1045
HspAI GCGC 2 cut(s) 334, 760
Kpn2I TCCGGA 1 cut(s) 1082
KpnI GGTACC 1 cut(s) 498
Kzo9I GATC 4 cut(s) 302, 859, 1001, 1185
LguI GCTCTTC 1 cut(s) 343
LmnI GCTCC 3 cut(s) 623, 649, 1063
Lsp1109I GCAGC 2 cut(s) 263, 326
LweI GCATC 3 cut(s) 179, 217, 301
MaeI CTAG 5 cut(s) 152, 270, 948, 1115, 1206
MaeIII GTNAC 1 cut(s) 94
MalI GATC 4 cut(s) 304, 861, 1003, 1187
MboI GATC 4 cut(s) 302, 859, 1001, 1185
MboII GAAGA 5 cut(s) 315, 330, 899, 902, 1163
MflI RGATCY 2 cut(s) 302, 1001
MhlI GDGCHC 3 cut(s) 443, 1222, 1254
MluCI AATT 8 cut(s) 178, 504, 540, 550, 627, 635, 843, 1027
MlyI GAGTC 2 cut(s) 763, 1271
MroI TCCGGA 1 cut(s) 1082
MroXI GAANNNNTTC 1 cut(s) 1090
MseI TTAA 5 cut(s) 503, 756, 765, 803, 1050
MslI CAYNNNNRTG 3 cut(s) 112, 220, 1099
MspA1I CMGCKG 1 cut(s) 254
MspCI CTTAAG 1 cut(s) 764
MspI CCGG 1 cut(s) 1083
MspR9I CCNGG 2 cut(s) 621, 1255
Mva1269I GAATGC 1 cut(s) 929
MvaI CCWGG 2 cut(s) 621, 1255
MvnI CGCG 1 cut(s) 723
MwoI GCNNNNNNNGC 5 cut(s) 342, 401, 410, 576, 914
NdeII GATC 4 cut(s) 302, 859, 1001, 1185
NlaIII CATG 6 cut(s) 111, 219, 266, 417, 1021, 1045
NlaIV GGNNCC 1 cut(s) 496
NspI RCATGY 4 cut(s) 111, 219, 417, 1021
NspV TTCGAA 1 cut(s) 326
OliI CACNNNNGTG 1 cut(s) 1099
PaeI GCATGC 2 cut(s) 417, 1021
PagI TCATGA 1 cut(s) 262
PciI ACATGT 2 cut(s) 107, 215
PciSI GCTCTTC 1 cut(s) 343
PctI GAATGC 1 cut(s) 929
PdmI GAANNNNTTC 1 cut(s) 1090
PfeI GAWTC 5 cut(s) 52, 155, 680, 791, 944
PkrI GCNGC 2 cut(s) 253, 316
PleI GAGTC 2 cut(s) 763, 1270
PpsI GAGTC 2 cut(s) 763, 1270
PpuMI RGGWCCY 1 cut(s) 611
PscI ACATGT 2 cut(s) 107, 215
PsiI TTATAA 1 cut(s) 38
Psp5II RGGWCCY 1 cut(s) 611
Psp6I CCWGG 2 cut(s) 619, 1253
PspGI CCWGG 2 cut(s) 619, 1253
PspN4I GGNNCC 1 cut(s) 496
PspPI GGNCC 2 cut(s) 611, 779
PspPPI RGGWCCY 1 cut(s) 611
PsuI RGATCY 2 cut(s) 302, 1001
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 1 cut(s) 496
RsaNI GTAC 1 cut(s) 495
RseI CAYNNNNRTG 3 cut(s) 112, 220, 1099
SapI GCTCTTC 1 cut(s) 343
SaqAI TTAA 5 cut(s) 503, 756, 765, 803, 1050
SatI GCNGC 2 cut(s) 252, 315
Sau3AI GATC 4 cut(s) 302, 859, 1001, 1185
Sau96I GGNCC 2 cut(s) 611, 779
SchI GAGTC 2 cut(s) 763, 1271
ScrFI CCNGG 2 cut(s) 621, 1255
SduI GDGCHC 3 cut(s) 443, 1222, 1254
SfaNI GCATC 3 cut(s) 179, 217, 301
SfuI TTCGAA 1 cut(s) 326
SinI GGWCC 1 cut(s) 611
SmiMI CAYNNNNRTG 3 cut(s) 112, 220, 1099
SmlI CTYRAG 1 cut(s) 764
SmoI CTYRAG 1 cut(s) 764
SpeI ACTAGT 1 cut(s) 269
SphI GCATGC 2 cut(s) 417, 1021
Sse9I AATT 8 cut(s) 178, 504, 540, 550, 627, 635, 843, 1027
SsiI CCGC 3 cut(s) 723, 752, 1126
SspI AATATT 1 cut(s) 459
SspMI CTAG 5 cut(s) 152, 270, 948, 1115, 1206
StyD4I CCNGG 2 cut(s) 619, 1253
TaaI ACNGT 4 cut(s) 164, 445, 491, 1237
TaqI TCGA 3 cut(s) 326, 427, 1260
TasI AATT 8 cut(s) 178, 504, 540, 550, 627, 635, 843, 1027
TfiI GAWTC 5 cut(s) 52, 155, 680, 791, 944
Tru1I TTAA 5 cut(s) 503, 756, 765, 803, 1050
Tru9I TTAA 5 cut(s) 503, 756, 765, 803, 1050
TscAI CASTG 5 cut(s) 73, 448, 496, 1113, 1242
TseI GCWGC 2 cut(s) 251, 314
TspDTI ATGAA 5 cut(s) 17, 114, 453, 630, 1245
TspRI CASTG 5 cut(s) 73, 448, 496, 1113, 1242
Vha464I CTTAAG 1 cut(s) 764
VneI GTGCAC 1 cut(s) 439
VpaK11BI GGWCC 1 cut(s) 611
XapI RAATTY 3 cut(s) 540, 550, 1027
XbaI TCTAGA 2 cut(s) 151, 947
XceI RCATGY 4 cut(s) 111, 219, 417, 1021
XmnI GAANNNNTTC 1 cut(s) 1090
XspI CTAG 5 cut(s) 152, 270, 948, 1115, 1206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.