Rroxscaffold_1G00037220

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
54291149 .. 54293904
2756 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00037220.1

Sequence Viewer

Length: 1650 bp
ATGGTTAATCAAATTCGGGGCGTGACAAGTTCATATATCAAGGTTTGTGGACCGGTGATTCTAAATCCGCATTCTTCATTGGATGCTGCTGGCAAGAAAAAAAGTTGGAAGATGGGGGCTTGGATGGTGGTTCTTGTAGTTATTGTTTCCATTTTGGGTTTGATGGCATTGGAGGGTGGTCTGTGGTGGTGGTTTTGCAGGGACAGTCCAAGCGTTGGTGCATTACTTGCAGTAAAGCAACTTGAGGGATTGAGCAAGGAGAAAAGCCGTTTAGGATGGAGCTTTCAACAACAGGAAAATTCTGAAGTTGGGAGAATCGATTCAAGATTGGCCTTGGCACTCGGGTCGGCAATTCGCTTCCATATGTATTCTGAAGATTACCCTGAGGCCGTGGGGTCCTCAACACCCGTAGTAGAGTTTGTGTCGGAATCAGAACTGTGGGAGGAGCAAGCAAACTGGGATGACCAAGACAAAAGCTTATATTTGTGCGTGGGCGTCTACTATGGGAGAAGAGGCAAGGTACTGTATGTTGTTTATCGTATCAATTTGAAAGCCCTCTTGTTTAGTGAGGATCTAGAGTTTGAAACCGTGTTCGAAGTTCCCGATAATGATAATATTGGGAATTGTGCCGGATTTGGTATGGGACTTTCTATGATATTCTTGGGTGGAGGATTTAGAGTCAAGTACTCGAAAGAATTTGTTGTCCCAGAGCCGTGTACAGGTATTCTGGCCTATCAGATTCGTGAAATTTTTGAAGGTGGTCATTTAGCTCATTTCTTAGACGGCAAAGTGAGGCCACTTATATGGGAGGTTGAAGGAAATTTGTTCGCTCTCGCTCGTAACCCGCCTCCTGGAATTGACACCGGTTTCCCAGCTAGTGAATGGAGAAACTGTTTTGAAATGTATGACCGGGCCCAGGGTCGATGGGTTGGTTTGCCGGACCCTCCTTCTTATGCTGAATACCCTGTCGCTGCTGTTGATGTGTCTGGTGGTGGTGGTATTGATGAGGGTGGTGATGAGGAGGAGGAGTTCGTTAGTTGTGATGAGGGCTCTTTGAGAAGGCACTGTTACTATTCAAGCTTCTCTTATGCAATTTTAGGTAGCCAACTTTTCGTGTCTAATCCATACTATCATGAATATTCATACAAGTGCAACCTTCCCAGCAAGCGTGAAAACTGGCCAGTTGAGTGGAAAGTTTCAAGTTTCCAATTTCAGGGTGTAACTCTAGGGGTTCAAACGGCACAAGGGTTTGTAGTCTTTTCCTATGATGTCAATATCCATCCGCCTGAATATGTGGTTAAACTTGAAGATAATCCCTACTTAAATATCAAAGTGCAACTGTTGATAAATGGCTATGATGAACCGGTGCTTTCTCAATCTCTAATGATGCCGCAAGAGCTGGATGAAGTTCAAGACTCCCAGTTTGTTCACCTAGGAGGTCAAAAAGTCTGCTTTCTCTATTCTAGAATGAGAGATTCCAAGTTGCTTGTAACCGCCATCACATTTGTCTTCCAACTCGAACAGAGAAATAGCGGCTTCAAAGTCAAAGCCAAATTTTATCCTACTCGCAACTGGGAATTCCAAAATAAGGCTGGGTCTAAGGCTAAAGTTTGGGCTACGGAACAGATGGTTGGTGCTGTTGTCGGGTAA

Protein Analysis

549

Amino Acids

61.79

Weight (kDa)

5.14

Isoelectric Point (pI)

45.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017356)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 215
AccI GTMKAC 1 cut(s) 498
AciI CCGC 6 cut(s) 68, 845, 1283, 1391, 1494, 1533
AclWI GGATC 1 cut(s) 579
AcoI YGGCCR 1 cut(s) 1178
AcsI RAATTY 7 cut(s) 12, 298, 695, 747, 820, 1553, 1577
AcuI CTGAAG 2 cut(s) 324, 393
AcyI GRCGYC 1 cut(s) 495
AfaI GTAC 3 cut(s) 522, 686, 718
AfiI CCNNNNNNNGG 6 cut(s) 215, 719, 851, 916, 1213, 1588
AgeI ACCGGT 3 cut(s) 52, 863, 1363
AjnI CCWGG 2 cut(s) 850, 915
AjuI GAANNNNNNNTTGG 2 cut(s) 1614, 1646
AloI GAACNNNNNNTCC 2 cut(s) 1013, 1045
AluBI AGCT 6 cut(s) 282, 477, 770, 875, 1080, 1399
AluI AGCT 6 cut(s) 282, 477, 770, 875, 1080, 1399
AlwI GGATC 1 cut(s) 579
Ama87I CYCGRG 1 cut(s) 341
AoxI GGCC 6 cut(s) 330, 387, 729, 794, 912, 1178
ApaI GGGCCC 1 cut(s) 916
ApeKI GCWGC 2 cut(s) 86, 971
ApoI RAATTY 7 cut(s) 12, 298, 695, 747, 820, 1553, 1577
ArsI GACNNNNNNTTYG 2 cut(s) 1406, 1438
AsiGI ACCGGT 3 cut(s) 52, 863, 1363
Asp700I GAANNNNTTC 1 cut(s) 319
AspA2I CCTAGG 1 cut(s) 1432
AspS9I GGNCC 5 cut(s) 50, 396, 912, 913, 940
AsuC2I CCSGG 1 cut(s) 911
AsuHPI GGTGA 3 cut(s) 67, 1025, 1421
AsuII TTCGAA 1 cut(s) 594
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 3 cut(s) 50, 396, 940
AvrII CCTAGG 1 cut(s) 1432
AxyI CCTNAGG 1 cut(s) 384
BaeGI GKGCMC 1 cut(s) 916
BalI TGGCCA 1 cut(s) 1180
BanII GRGCYC 2 cut(s) 916, 1052
BbsI GAAGAC 1 cut(s) 1501
BbvI GCAGC 2 cut(s) 73, 958
BccI CCATC 8 cut(s) 106, 118, 157, 270, 918, 1287, 1505, 1621
BceAI ACGGC 5 cut(s) 252, 374, 697, 799, 1254
BcgI CGANNNNNNTGC 2 cut(s) 327, 361
BciT130I CCWGG 2 cut(s) 852, 917
BcnI CCSGG 1 cut(s) 911
BfaI CTAG 5 cut(s) 575, 876, 1226, 1433, 1464
BisI GCNGC 4 cut(s) 87, 972, 1391, 1534
BlnI CCTAGG 1 cut(s) 1432
BlsI GCNGC 4 cut(s) 88, 973, 1392, 1535
BmcAI AGTACT 1 cut(s) 686
Bme1390I CCNGG 3 cut(s) 852, 911, 917
Bme18I GGWCC 3 cut(s) 50, 396, 940
BmeT110I CYCGRG 1 cut(s) 341
BmgT120I GGNCC 5 cut(s) 50, 396, 912, 913, 940
BmiI GGNNCC 3 cut(s) 397, 914, 942
BmrFI CCNGG 3 cut(s) 852, 911, 917
BmrI ACTGGG 3 cut(s) 466, 1414, 1582
BmsI GCATC 2 cut(s) 73, 1377
BmuI ACTGGG 3 cut(s) 466, 1414, 1582
BpiI GAAGAC 1 cut(s) 1501
Bpu14I TTCGAA 1 cut(s) 594
BpuEI CTTGAG 1 cut(s) 263
BpuMI CCSGG 1 cut(s) 911
Bsa29I ATCGAT 1 cut(s) 318
BsaHI GRCGYC 1 cut(s) 495
BsaJI CCNNGG 5 cut(s) 333, 390, 915, 916, 1432
BsaWI WCCGGW 3 cut(s) 52, 863, 1363
BsaXI ACNNNNNCTCC 4 cut(s) 877, 907, 1013, 1043
Bsc4I CCNNNNNNNGG 6 cut(s) 215, 719, 851, 916, 1213, 1588
Bse118I RCCGGY 3 cut(s) 52, 863, 1363
Bse1I ACTGG 5 cut(s) 461, 1181, 1181, 1420, 1577
Bse21I CCTNAGG 1 cut(s) 384
BseBI CCWGG 2 cut(s) 852, 917
BseCI ATCGAT 1 cut(s) 318
BseDI CCNNGG 5 cut(s) 333, 390, 915, 916, 1432
BseGI GGATG 6 cut(s) 88, 129, 281, 466, 1279, 1408
BseLI CCNNNNNNNGG 6 cut(s) 215, 719, 851, 916, 1213, 1588
BseMII CTCAG 1 cut(s) 375
BseNI ACTGG 5 cut(s) 461, 1181, 1181, 1420, 1577
BseRI GAGGAG 4 cut(s) 458, 1034, 1037, 1040
BseSI GKGCMC 1 cut(s) 916
BseXI GCAGC 2 cut(s) 73, 958
BseYI CCCAGC 3 cut(s) 871, 1160, 1592
BshFI GGCC 6 cut(s) 332, 389, 731, 796, 914, 1180
BshTI ACCGGT 3 cut(s) 52, 863, 1363
BshVI ATCGAT 1 cut(s) 318
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 6 cut(s) 53, 630, 864, 910, 938, 1364
BslFI GGGAC 3 cut(s) 215, 657, 689
BslI CCNNNNNNNGG 6 cut(s) 215, 719, 851, 916, 1213, 1588
BsmFI GGGAC 3 cut(s) 215, 657, 689
BsmI GAATGC 1 cut(s) 70
BsnI GGCC 6 cut(s) 332, 389, 731, 796, 914, 1180
BsoBI CYCGRG 1 cut(s) 341
Bsp119I TTCGAA 1 cut(s) 594
Bsp120I GGGCCC 1 cut(s) 912
Bsp1286I GDGCHC 2 cut(s) 916, 1052
Bsp1407I TGTACA 1 cut(s) 716
Bsp143I GATC 1 cut(s) 571
BspACI CCGC 6 cut(s) 68, 845, 1283, 1391, 1494, 1533
BspANI GGCC 6 cut(s) 332, 389, 731, 796, 914, 1180
BspCNI CTCAG 1 cut(s) 376
BspDI ATCGAT 1 cut(s) 318
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 3 cut(s) 397, 914, 942
BspPI GGATC 1 cut(s) 579
BspT104I TTCGAA 1 cut(s) 594
BsrFI RCCGGY 3 cut(s) 52, 863, 1363
BsrGI TGTACA 1 cut(s) 716
BsrI ACTGG 5 cut(s) 461, 1181, 1181, 1420, 1577
BssAI RCCGGY 3 cut(s) 52, 863, 1363
BssECI CCNNGG 5 cut(s) 333, 390, 915, 916, 1432
BssMI GATC 1 cut(s) 571
BssNI GRCGYC 1 cut(s) 495
BssT1I CCWWGG 2 cut(s) 333, 1432
Bst2UI CCWGG 2 cut(s) 852, 917
Bst4CI ACNGT 7 cut(s) 206, 438, 525, 589, 893, 1067, 1341
Bst6I CTCTTC 1 cut(s) 505
BstACI GRCGYC 1 cut(s) 495
BstAPI GCANNNNNTGC 1 cut(s) 227
BstAUI TGTACA 1 cut(s) 716
BstBI TTCGAA 1 cut(s) 594
BstC8I GCNNGC 3 cut(s) 91, 450, 1166
BstDEI CTNAG 3 cut(s) 384, 778, 1599
BstDSI CCRYGG 1 cut(s) 390
BstF5I GGATG 6 cut(s) 88, 129, 281, 466, 1279, 1408
BstKTI GATC 1 cut(s) 574
BstMBI GATC 1 cut(s) 571
BstMWI GCNNNNNNNGC 2 cut(s) 227, 1396
BstNI CCWGG 2 cut(s) 852, 917
BstSCI CCNGG 3 cut(s) 850, 909, 915
BstSLI GKGCMC 1 cut(s) 916
BstV1I GCAGC 2 cut(s) 73, 958
BstV2I GAAGAC 1 cut(s) 1501
BstX2I RGATCY 1 cut(s) 571
BstXI CCANNNNNNTGG 2 cut(s) 804, 1188
BstYI RGATCY 1 cut(s) 571
Bsu15I ATCGAT 1 cut(s) 318
Bsu36I CCTNAGG 1 cut(s) 384
BsuRI GGCC 6 cut(s) 332, 389, 731, 796, 914, 1180
BsuTUI ATCGAT 1 cut(s) 318
BtgI CCRYGG 1 cut(s) 390
BtsCI GGATG 6 cut(s) 88, 129, 281, 466, 1279, 1408
BtsIMutI CAGTG 1 cut(s) 1063
Cac8I GCNNGC 3 cut(s) 91, 450, 1166
CciI TCATGA 1 cut(s) 1132
Cfr10I RCCGGY 3 cut(s) 52, 863, 1363
Cfr13I GGNCC 5 cut(s) 50, 396, 912, 913, 940
ClaI ATCGAT 1 cut(s) 318
CseI GACGC 1 cut(s) 484
Csp6I GTAC 3 cut(s) 521, 685, 717
CspAI ACCGGT 3 cut(s) 52, 863, 1363
CspCI CAANNNNNGTGG 2 cut(s) 28, 63
CviAII CATG 1 cut(s) 1133
CviQI GTAC 3 cut(s) 521, 685, 717
DdeI CTNAG 3 cut(s) 384, 778, 1599
DpnI GATC 1 cut(s) 573
DpnII GATC 1 cut(s) 571
EaeI YGGCCR 1 cut(s) 1178
Eam1104I CTCTTC 1 cut(s) 505
EarI CTCTTC 1 cut(s) 505
EciI GGCGGA 1 cut(s) 1272
Eco130I CCWWGG 2 cut(s) 333, 1432
Eco24I GRGCYC 2 cut(s) 916, 1052
Eco47I GGWCC 3 cut(s) 50, 396, 940
Eco57I CTGAAG 2 cut(s) 324, 393
Eco81I CCTNAGG 1 cut(s) 384
Eco88I CYCGRG 1 cut(s) 341
EcoO109I RGGNCCY 1 cut(s) 396
EcoRI GAATTC 1 cut(s) 1577
EcoRII CCWGG 2 cut(s) 850, 915
EcoT14I CCWWGG 2 cut(s) 333, 1432
EcoT38I GRGCYC 2 cut(s) 916, 1052
ErhI CCWWGG 2 cut(s) 333, 1432
FaeI CATG 1 cut(s) 1136
FalI AAGNNNNNCTT 2 cut(s) 1069, 1101
FaqI GGGAC 3 cut(s) 215, 657, 689
FatI CATG 1 cut(s) 1132
FauI CCCGC 1 cut(s) 852
FauNDI CATATG 1 cut(s) 363
FblI GTMKAC 1 cut(s) 498
Fnu4HI GCNGC 4 cut(s) 87, 972, 1391, 1534
FokI GGATG 6 cut(s) 95, 136, 288, 473, 1266, 1415
FriOI GRGCYC 2 cut(s) 916, 1052
Fsp4HI GCNGC 4 cut(s) 87, 972, 1391, 1534
FspBI CTAG 5 cut(s) 575, 876, 1226, 1433, 1464
GluI GCNGC 4 cut(s) 87, 972, 1391, 1534
GsaI CCCAGC 3 cut(s) 875, 1164, 1596
HaeIII GGCC 6 cut(s) 332, 389, 731, 796, 914, 1180
HapII CCGG 6 cut(s) 53, 630, 864, 910, 938, 1364
HgaI GACGC 1 cut(s) 484
Hin1I GRCGYC 1 cut(s) 495
Hin1II CATG 1 cut(s) 1136
HindIII AAGCTT 2 cut(s) 475, 1078
HinfI GANTC 8 cut(s) 58, 315, 320, 428, 678, 739, 1415, 1475
HpaII CCGG 6 cut(s) 53, 630, 864, 910, 938, 1364
HphI GGTGA 3 cut(s) 67, 1025, 1421
Hpy166II GTNNAC 4 cut(s) 50, 499, 717, 1429
Hpy188I TCNGA 5 cut(s) 304, 373, 427, 433, 738
Hpy188III TCNNGA 7 cut(s) 324, 575, 602, 743, 1133, 1412, 1464
Hpy8I GTNNAC 4 cut(s) 50, 499, 717, 1429
HpyAV CCTTC 5 cut(s) 749, 809, 957, 1053, 1166
HpyCH4III ACNGT 7 cut(s) 206, 438, 525, 589, 893, 1067, 1341
HpyCH4V TGCA 6 cut(s) 198, 221, 230, 1091, 1152, 1336
HpyF10VI GCNNNNNNNGC 2 cut(s) 227, 1396
HpyF3I CTNAG 3 cut(s) 384, 778, 1599
Hsp92I GRCGYC 1 cut(s) 495
Hsp92II CATG 1 cut(s) 1136
Kzo9I GATC 1 cut(s) 571
LmnI GCTCC 2 cut(s) 279, 445
Lsp1109I GCAGC 2 cut(s) 73, 958
LweI GCATC 2 cut(s) 73, 1377
MaeI CTAG 5 cut(s) 575, 876, 1226, 1433, 1464
MaeIII GTNAC 5 cut(s) 22, 839, 1067, 1219, 1489
MalI GATC 1 cut(s) 573
MboI GATC 1 cut(s) 571
MboII GAAGA 6 cut(s) 66, 121, 386, 522, 1319, 1501
MflI RGATCY 1 cut(s) 571
MhlI GDGCHC 2 cut(s) 916, 1052
MlsI TGGCCA 1 cut(s) 1180
MluNI TGGCCA 1 cut(s) 1180
MlyI GAGTC 2 cut(s) 687, 1409
MmeI TCCRAC 3 cut(s) 86, 405, 1537
Mox20I TGGCCA 1 cut(s) 1180
MroXI GAANNNNTTC 1 cut(s) 319
MscI TGGCCA 1 cut(s) 1180
MseI TTAA 3 cut(s) 6, 1299, 1322
MslI CAYNNNNRTG 2 cut(s) 802, 1147
Msp20I TGGCCA 1 cut(s) 1180
MspI CCGG 6 cut(s) 53, 630, 864, 910, 938, 1364
MspR9I CCNGG 3 cut(s) 852, 911, 917
Mva1269I GAATGC 1 cut(s) 70
MvaI CCWGG 2 cut(s) 852, 917
MwoI GCNNNNNNNGC 2 cut(s) 227, 1396
NciI CCSGG 1 cut(s) 911
NdeI CATATG 1 cut(s) 363
NdeII GATC 1 cut(s) 571
NlaIII CATG 1 cut(s) 1136
NlaIV GGNNCC 3 cut(s) 397, 914, 942
NmuCI GTSAC 1 cut(s) 22
NspV TTCGAA 1 cut(s) 594
PagI TCATGA 1 cut(s) 1132
PasI CCCWGGG 1 cut(s) 916
PcsI WCGNNNNNNNCGW 1 cut(s) 600
PctI GAATGC 1 cut(s) 70
PdmI GAANNNNTTC 1 cut(s) 319
PfeI GAWTC 6 cut(s) 58, 315, 320, 428, 739, 1475
PflMI CCANNNNNTGG 1 cut(s) 215
PfoI TCCNGGA 1 cut(s) 850
PinAI ACCGGT 3 cut(s) 52, 863, 1363
PkrI GCNGC 4 cut(s) 88, 973, 1392, 1535
PleI GAGTC 2 cut(s) 686, 1409
PpsI GAGTC 2 cut(s) 686, 1409
PpuMI RGGWCCY 1 cut(s) 396
Psp5II RGGWCCY 1 cut(s) 396
Psp6I CCWGG 2 cut(s) 850, 915
PspFI CCCAGC 3 cut(s) 871, 1160, 1592
PspGI CCWGG 2 cut(s) 850, 915
PspN4I GGNNCC 3 cut(s) 397, 914, 942
PspOMI GGGCCC 1 cut(s) 912
PspPI GGNCC 5 cut(s) 50, 396, 912, 913, 940
PspPPI RGGWCCY 1 cut(s) 396
PsuI RGATCY 1 cut(s) 571
RsaI GTAC 3 cut(s) 522, 686, 718
RsaNI GTAC 3 cut(s) 521, 685, 717
RseI CAYNNNNRTG 2 cut(s) 802, 1147
SaqAI TTAA 3 cut(s) 6, 1299, 1322
SatI GCNGC 4 cut(s) 87, 972, 1391, 1534
Sau3AI GATC 1 cut(s) 571
Sau96I GGNCC 5 cut(s) 50, 396, 912, 913, 940
ScaI AGTACT 1 cut(s) 686
SchI GAGTC 2 cut(s) 687, 1409
ScrFI CCNGG 3 cut(s) 852, 911, 917
SduI GDGCHC 2 cut(s) 916, 1052
SfaNI GCATC 2 cut(s) 73, 1377
SfuI TTCGAA 1 cut(s) 594
SinI GGWCC 3 cut(s) 50, 396, 940
SmiMI CAYNNNNRTG 2 cut(s) 802, 1147
SmlI CTYRAG 1 cut(s) 242
SmoI CTYRAG 1 cut(s) 242
SsiI CCGC 6 cut(s) 68, 845, 1283, 1391, 1494, 1533
SspI AATATT 2 cut(s) 616, 1139
SspMI CTAG 5 cut(s) 575, 876, 1226, 1433, 1464
StyD4I CCNGG 3 cut(s) 850, 909, 915
StyI CCWWGG 2 cut(s) 333, 1432
TaaI ACNGT 7 cut(s) 206, 438, 525, 589, 893, 1067, 1341
TaqI TCGA 5 cut(s) 318, 594, 689, 922, 1518
TatI WGTACW 2 cut(s) 684, 716
TauI GCSGC 2 cut(s) 1393, 1536
TfiI GAWTC 6 cut(s) 58, 315, 320, 428, 739, 1475
Tru1I TTAA 3 cut(s) 6, 1299, 1322
Tru9I TTAA 3 cut(s) 6, 1299, 1322
TscAI CASTG 1 cut(s) 1070
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 2 cut(s) 86, 971
Tsp45I GTSAC 1 cut(s) 22
TspDTI ATGAA 6 cut(s) 21, 66, 1131, 1149, 1374, 1419
TspGWI ACGGA 1 cut(s) 1634
TspRI CASTG 1 cut(s) 1070
Van91I CCANNNNNTGG 1 cut(s) 215
VpaK11BI GGWCC 3 cut(s) 50, 396, 940
XapI RAATTY 7 cut(s) 12, 298, 695, 747, 820, 1553, 1577
XbaI TCTAGA 2 cut(s) 574, 1463
XcmI CCANNNNNNNNNTGG 2 cut(s) 879, 1589
XmaJI CCTAGG 1 cut(s) 1432
XmiI GTMKAC 1 cut(s) 498
XmnI GAANNNNTTC 1 cut(s) 319
XspI CTAG 5 cut(s) 575, 876, 1226, 1433, 1464
ZrmI AGTACT 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.