Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006233

Physical Location & Seq

Genomic Coordinates Reverse (-)

85550483 .. 85556153

Gene Structure 5671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00063780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGGGATTCAAGGGCTTCTGCCCTTGTTGAAATCGATAATGGAGCCAATCCACATTAAGGATTTGAAGGGCTCTTGTGTGGCCATCGATACCTACTCTTGGCTTCACAAAGGTGCCTTGTCCTGCAGCAGAGACCTCTGTAAAGGCATACCCACTTCCAGGCACATTGACTACTGCATGCATAGAGTGAATCTGCTGCGGCATTACGGTGTTAAGCCTATACTTGTCTTTGATGGCGGTCTTCTACCGATGAAGGGTGAACAAGAGAACAAACGTGCAAGGGCGAGAAAGGAAAATTTTGCGCGTGCTATTGAGCATGATTCCAATGGCAATTCTTCTGCTGCTTATGAGTGCTACCAGAAAGCTGTTGACATTTCACCTTCTATTGCCCTAGAGTTAATCCAGGTCTTAAAACAGGAGAATGTATGTTATGTTGTGGCTCCATATGAGGCAGATGCACAAATGACCTTCTTGGCAGTCAGCAAACAGGTGGAGGCAGTCATCACTGAAGACTCTGATCTAATACCATTTGGATGTCCCAGGATTATCTATAAAATGGACAAATTTGGGCAAGGTGTTGAGTTTCAGTATTCAAGGCTACCTCGGAACAAGGACTTGAGCTTTGCAGGGTTCACAAAACAGATGGTTCTGGAGATGTGTATTCTTAGTGGTTGTGACTATTTGCAGTCATTGCCTGGAATGGGACTTAAAAGGGCACATGCACTCATTAAAAAGTTCACAAGTTATGACAAGGTTATTAAGCACCTGAAGTACAGTACTGTTTCAGTTCCTCCCCTATATGAAGAATCATTCAAGAAAGCAATAATGACTTTCCAGCATCAACTGGTTTATGATCCTGTTTCTCAAGATATTGTACATTTGTCTGATTTGTCTGTTGATGTTGAAGAAAATTTGGACTTCTTAGGACCATCTATACCACAACATATAGCTAAAGGTATAGCAGATGGGGATCTTGATCCATTTACCAACATGCCATTCCAGCAACAGGGTGAGAAGATTAGTGCCAACACAAGTTCCCAACCCAAAAATGTGAATTTTGGATATACAAAGAAAAAGCTAGATTTGCCTGTGCAGAATAATCTTCTGACAAAGTACTTTTGCTTTGCTTCTCTTGAAGCAAAGAGAAAATTCAGGGCACCACGATCATCACCTGATGATCCAAGTCCAATTTCTAGTTCTAGCCTCAGCCCAGATGAGAATACCTTTGTGGATGATGCTTTTGGTAAAACCAACTTCTCAGGTTCTTCTCCCGGTCTAGATGAACATGTCTCTGTGGATGATGCCGTTTGTACAACAAATTACTCAGAGCCCATTCTGCTTGACCCTGAAAACATTGGAAATACGCCTCCTAGTGATTCAGTAGAAGATGGTTTTCCCACTGATTTATCAGAATCTCCAAATGATGATATGGCGGGCAAGACAAGAAGTCCAGAAAGTACATTGTTACAACAACCCATACATTCAATTCACAAACCCTGTTTAACACTGCATAGGGAGCGTGAATGTAAGAATGCCCAAGGCACATTTGAGGGTAAAACAAGGACAGAGAACAGAAAGGTCATTGTAAGAAGTCCTTATTTTAAGGAGAAATCAAACAATGAAAATAAGCAGGAAGATAAACAAGAAAAAATCTTGTTGAAGGATTCTCTTGGCAACAATATGCATGATAATGCAGATCCTGAGAGTGCCCCTTTCGGGAATAGCCATTTCCCTAGAAAACTTGTGAAAAGGAAAAACTCCCCAAATGACAGCGTTCAAGAGGACGATGGGAAGCCCAAACAAATGTGTACTAATACATCACTACCTGATAACGGTCCTTCTGCTTCCAGCCATGAAGCAACATTTAAGGATACAAAAACTGAAGAAGGAAGATTTGGATCCAACATTTCCCATTTGGGTCGTTACTCTGATATAGCAGAGAAGTCAATGGAAAATTTTGTTTCAGTAATATCATCATTTAGATTTGGCTCATCTGGTTCTCGTGCAAGTGGCCTCCGTGCTCCTCTGAAAGATGTTCGAAATACTTGTACCAACAGGACAACTGTTGGTGCTGACTTTAGCCAATTTGAATATGTACCAAATAATCAAAAGACAAAAACAACATCTCGAAAAAGAAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03430 map03430

Pfam Domains

Protein Families

XPG_I XPG_N

Protein Analysis

714

Amino Acids

79.65

Weight (kDa)

7.02

Isoelectric Point (pI)

51.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
XPG_N	PF00752	1 - 98	2e-22	XPG N-terminal domain
XPG_I	PF00867	142 - 226	7.2e-20	XPG I-region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29630 AT1G29630 AT1G29630
fragaria_vesca	FvH4_3g06460 FvH4_3g06460 FvH4_3g06460 FvH4_3g06460 FvH4_3g06460
malus_domestica	MD10G1269500.v1.1
prunus_persica	Prupe.4G072200_v2.0.a1
pyrus_communis	pycom10g22570
rosa_chinensis	RchiOBHm_Chr5g0012821 RchiOBHm_Chr5g0012831
rosa_laevigata	RLG00000031958
rosa_multiflora	Rmu_sc0002365.1_g000036 Rmu_sc0022594.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063780
rosa_rugosa	Rorug05G0004500 Rorug05G0004500
rosa_samantha	Rh5AG098300 Rh5AG098400 Rh5BG095200 Rh5CG107200 Rh5CG107300 Rh5DG093900 Rh5DG094000
rosa_wichuraiana	Rw5G008600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	113, 1156
AccII	CGCG	1 cut(s)	304
AciI	CCGC	3 cut(s)	199, 237, 1433
AclWI	GGATC	7 cut(s)	848, 971, 978, 1172, 1691, 1893, 1906
AcoI	YGGCCR	1 cut(s)	81
AcsI	RAATTY	7 cut(s)	295, 563, 910, 1054, 1148, 1954, 2139
AcuI	CTGAAG	3 cut(s)	528, 788, 1902
AfaI	GTAC	9 cut(s)	773, 778, 876, 1115, 1312, 1459, 1810, 2050, 2097
AfiI	CCNNNNNNNGG	8 cut(s)	58, 99, 159, 254, 701, 1006, 1716, 1832
AflIII	ACRYGT	1 cut(s)	1285
AhdI	GACNNNNNGTC	1 cut(s)	1446
AjnI	CCWGG	4 cut(s)	158, 402, 539, 694
AjuI	GAANNNNNNNTTGG	8 cut(s)	980, 1012, 1174, 1180, 1206, 1212, 1878, 1910
AleI	CACNNNNGTG	1 cut(s)	111
AluBI	AGCT	4 cut(s)	365, 621, 950, 1078
AluI	AGCT	4 cut(s)	365, 621, 950, 1078
Alw21I	GWGCWC	1 cut(s)	2023
Alw26I	GTCTC	2 cut(s)	126, 1294
AlwI	GGATC	7 cut(s)	848, 971, 978, 1172, 1691, 1893, 1906
AlwNI	CAGNNNCTG	1 cut(s)	1700
AoxI	GGCC	2 cut(s)	81, 2011
ApeKI	GCWGC	3 cut(s)	126, 196, 341
ApoI	RAATTY	7 cut(s)	295, 563, 910, 1054, 1148, 1954, 2139
ArsI	GACNNNNNNTTYG	2 cut(s)	605, 637
AspLEI	GCGC	1 cut(s)	304
AspS9I	GGNCC	2 cut(s)	926, 1835
AsuC2I	CCSGG	1 cut(s)	1272
AsuHPI	GGTGA	4 cut(s)	269, 369, 1022, 1161
AsuII	TTCGAA	1 cut(s)	2038
AvaII	GGWCC	2 cut(s)	926, 1835
BaeGI	GKGCMC	3 cut(s)	718, 1159, 1711
BalI	TGGCCA	1 cut(s)	83
BamHI	GGATCC	1 cut(s)	1898
BanI	GGYRCC	2 cut(s)	113, 1156
BanII	GRGCYC	2 cut(s)	74, 1332
BauI	CACGAG	1 cut(s)	2001
BbsI	GAAGAC	2 cut(s)	233, 516
Bbv12I	GWGCWC	1 cut(s)	2023
BbvCI	CCTCAGC	1 cut(s)	1205
BbvI	GCAGC	3 cut(s)	138, 183, 328
BccI	CCATC	7 cut(s)	92, 227, 637, 937, 959, 1382, 1781
BceAI	ACGGC	1 cut(s)	1289
BciT130I	CCWGG	4 cut(s)	160, 404, 541, 696
BciVI	GTATCC	1 cut(s)	1864
BcnI	CCSGG	1 cut(s)	1272
BcoDI	GTCTC	2 cut(s)	126, 1294
BfaI	CTAG	7 cut(s)	392, 1079, 1194, 1200, 1277, 1371, 1734
BfmI	CTRYAG	1 cut(s)	124
BfuI	GTATCC	1 cut(s)	1864
BisI	GCNGC	4 cut(s)	127, 197, 200, 342
BlsI	GCNGC	4 cut(s)	128, 198, 201, 343
BmcAI	AGTACT	2 cut(s)	778, 1115
Bme1390I	CCNGG	5 cut(s)	160, 404, 541, 696, 1272
Bme18I	GGWCC	2 cut(s)	926, 1835
BmeRI	GACNNNNNGTC	1 cut(s)	1446
BmgT120I	GGNCC	2 cut(s)	926, 1835
BmiI	GGNNCC	5 cut(s)	45, 115, 441, 1158, 1900
BmrFI	CCNGG	5 cut(s)	160, 404, 541, 696, 1272
BmsI	GCATC	4 cut(s)	445, 847, 1225, 1291
BpiI	GAAGAC	2 cut(s)	233, 516
BpmI	CTGGAG	1 cut(s)	671
Bpu10I	CCTNAGC	1 cut(s)	1205
Bpu14I	TTCGAA	1 cut(s)	2038
BpuEI	CTTGAG	2 cut(s)	637, 849
BpuMI	CCSGG	1 cut(s)	1272
Bsa29I	ATCGAT	2 cut(s)	35, 87
BsaBI	GATNNNNATC	3 cut(s)	969, 975, 1897
BsaI	GGTCTC	1 cut(s)	126
BsaJI	CCNNGG	3 cut(s)	539, 602, 1537
Bsc4I	CCNNNNNNNGG	8 cut(s)	58, 99, 159, 254, 701, 1006, 1716, 1832
Bse1I	ACTGG	1 cut(s)	849
Bse3DI	GCAATG	1 cut(s)	689
Bse8I	GATNNNNATC	3 cut(s)	969, 975, 1897
BseBI	CCWGG	4 cut(s)	160, 404, 541, 696
BseCI	ATCGAT	2 cut(s)	35, 87
BseDI	CCNNGG	3 cut(s)	539, 602, 1537
BseGI	GGATG	3 cut(s)	539, 1237, 1303
BseJI	GATNNNNATC	3 cut(s)	969, 975, 1897
BseLI	CCNNNNNNNGG	8 cut(s)	58, 99, 159, 254, 701, 1006, 1716, 1832
BseMI	GCAATG	1 cut(s)	689
BseMII	CTCAG	4 cut(s)	1219, 1272, 1338, 1692
BseNI	ACTGG	1 cut(s)	849
BseRI	GAGGAG	1 cut(s)	2013
BseSI	GKGCMC	3 cut(s)	718, 1159, 1711
BseXI	GCAGC	3 cut(s)	138, 183, 328
BsgI	GTGCAG	1 cut(s)	1112
Bsh1236I	CGCG	1 cut(s)	304
BshFI	GGCC	2 cut(s)	83, 2013
BshNI	GGYRCC	2 cut(s)	113, 1156
BshVI	ATCGAT	2 cut(s)	35, 87
BsiHKAI	GWGCWC	1 cut(s)	2023
BsiSI	CCGG	1 cut(s)	1272
BslFI	GGGAC	2 cut(s)	522, 717
BslI	CCNNNNNNNGG	8 cut(s)	58, 99, 159, 254, 701, 1006, 1716, 1832
BsmAI	GTCTC	2 cut(s)	126, 1294
BsmFI	GGGAC	2 cut(s)	522, 717
BsmI	GAATGC	1 cut(s)	1537
BsnI	GGCC	2 cut(s)	83, 2013
Bso31I	GGTCTC	1 cut(s)	126
Bsp119I	TTCGAA	1 cut(s)	2038
Bsp1286I	GDGCHC	6 cut(s)	74, 718, 1159, 1332, 1711, 2023
Bsp1407I	TGTACA	2 cut(s)	874, 1310
Bsp143I	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
BspACI	CCGC	3 cut(s)	199, 237, 1433
BspANI	GGCC	2 cut(s)	83, 2013
BspCNI	CTCAG	4 cut(s)	1218, 1271, 1337, 1693
BspDI	ATCGAT	2 cut(s)	35, 87
BspFNI	CGCG	1 cut(s)	304
BspLI	GGNNCC	5 cut(s)	45, 115, 441, 1158, 1900
BspMAI	CTGCAG	1 cut(s)	128
BspPI	GGATC	7 cut(s)	848, 971, 978, 1172, 1691, 1893, 1906
BspT104I	TTCGAA	1 cut(s)	2038
BspT107I	GGYRCC	2 cut(s)	113, 1156
BspTNI	GGTCTC	1 cut(s)	126
BsrDI	GCAATG	1 cut(s)	689
BsrGI	TGTACA	2 cut(s)	874, 1310
BsrI	ACTGG	1 cut(s)	849
BssECI	CCNNGG	3 cut(s)	539, 602, 1537
BssMI	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
BssSI	CACGAG	1 cut(s)	2001
BssT1I	CCWWGG	1 cut(s)	1537
Bst2BI	CACGAG	1 cut(s)	2001
Bst2UI	CCWGG	4 cut(s)	160, 404, 541, 696
Bst4CI	ACNGT	5 cut(s)	209, 776, 781, 1835, 2065
BstAPI	GCANNNNNTGC	1 cut(s)	691
BstAUI	TGTACA	2 cut(s)	874, 1310
BstBI	TTCGAA	1 cut(s)	2038
BstC8I	GCNNGC	3 cut(s)	179, 306, 1435
BstDEI	CTNAG	6 cut(s)	665, 922, 1205, 1258, 1324, 1701
BstF5I	GGATG	3 cut(s)	539, 1237, 1303
BstFNI	CGCG	1 cut(s)	304
BstHHI	GCGC	1 cut(s)	304
BstKTI	GATC	8 cut(s)	520, 856, 973, 979, 1166, 1180, 1699, 1901
BstMAI	GTCTC	2 cut(s)	126, 1294
BstMBI	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
BstMWI	GCNNNNNNNGC	5 cut(s)	691, 1000, 1084, 1336, 1516
BstNI	CCWGG	4 cut(s)	160, 404, 541, 696
BstNSI	RCATGY	4 cut(s)	181, 722, 994, 1289
BstSCI	CCNGG	5 cut(s)	158, 402, 539, 694, 1270
BstSFI	CTRYAG	1 cut(s)	124
BstSLI	GKGCMC	3 cut(s)	718, 1159, 1711
BstUI	CGCG	1 cut(s)	304
BstV1I	GCAGC	3 cut(s)	138, 183, 328
BstV2I	GAAGAC	2 cut(s)	233, 516
BstX2I	RGATCY	3 cut(s)	970, 1696, 1898
BstYI	RGATCY	3 cut(s)	970, 1696, 1898
Bsu15I	ATCGAT	2 cut(s)	35, 87
BsuI	GTATCC	1 cut(s)	1864
BsuRI	GGCC	2 cut(s)	83, 2013
BsuTUI	ATCGAT	2 cut(s)	35, 87
BtsCI	GGATG	3 cut(s)	539, 1237, 1303
BtsI	GCAGTG	1 cut(s)	1505
BtsIMutI	CAGTG	3 cut(s)	504, 1398, 1505
Cac8I	GCNNGC	3 cut(s)	179, 306, 1435
CaiI	CAGNNNCTG	1 cut(s)	1700
CfoI	GCGC	1 cut(s)	304
Cfr13I	GGNCC	2 cut(s)	926, 1835
ClaI	ATCGAT	2 cut(s)	35, 87
Csp6I	GTAC	9 cut(s)	772, 777, 875, 1114, 1311, 1458, 1809, 2049, 2096
CviAII	CATG	7 cut(s)	178, 317, 719, 991, 1286, 1685, 1853
CviQI	GTAC	9 cut(s)	772, 777, 875, 1114, 1311, 1458, 1809, 2049, 2096
DdeI	CTNAG	6 cut(s)	665, 922, 1205, 1258, 1324, 1701
DpnI	GATC	8 cut(s)	519, 855, 972, 978, 1165, 1179, 1698, 1900
DpnII	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
DriI	GACNNNNNGTC	1 cut(s)	1446
EaeI	YGGCCR	1 cut(s)	81
Eam1105I	GACNNNNNGTC	1 cut(s)	1446
Eco130I	CCWWGG	1 cut(s)	1537
Eco24I	GRGCYC	2 cut(s)	74, 1332
Eco31I	GGTCTC	1 cut(s)	126
Eco47I	GGWCC	2 cut(s)	926, 1835
Eco57I	CTGAAG	3 cut(s)	528, 788, 1902
EcoRII	CCWGG	4 cut(s)	158, 402, 539, 694
EcoT14I	CCWWGG	1 cut(s)	1537
EcoT22I	ATGCAT	2 cut(s)	183, 1686
EcoT38I	GRGCYC	2 cut(s)	74, 1332
ErhI	CCWWGG	1 cut(s)	1537
FaeI	CATG	7 cut(s)	181, 320, 722, 994, 1289, 1688, 1856
FalI	AAGNNNNNCTT	2 cut(s)	1579, 1611
FaqI	GGGAC	2 cut(s)	522, 717
FatI	CATG	7 cut(s)	177, 316, 718, 990, 1285, 1684, 1852
FauI	CCCGC	1 cut(s)	1426
FauNDI	CATATG	1 cut(s)	445
Fnu4HI	GCNGC	4 cut(s)	127, 197, 200, 342
FokI	GGATG	3 cut(s)	546, 1244, 1310
FriOI	GRGCYC	2 cut(s)	74, 1332
Fsp4HI	GCNGC	4 cut(s)	127, 197, 200, 342
FspBI	CTAG	7 cut(s)	392, 1079, 1194, 1200, 1277, 1371, 1734
GlaI	GCGC	1 cut(s)	303
GluI	GCNGC	4 cut(s)	127, 197, 200, 342
GsuI	CTGGAG	1 cut(s)	671
HaeIII	GGCC	2 cut(s)	83, 2013
HapII	CCGG	1 cut(s)	1272
HhaI	GCGC	1 cut(s)	304
Hin1II	CATG	7 cut(s)	181, 320, 722, 994, 1289, 1688, 1856
Hin6I	GCGC	1 cut(s)	302
HinP1I	GCGC	1 cut(s)	302
HincII	GTYRAC	1 cut(s)	370
HindII	GTYRAC	1 cut(s)	370
HinfI	GANTC	8 cut(s)	7, 190, 320, 512, 806, 1376, 1412, 1664
HpaII	CCGG	1 cut(s)	1272
HphI	GGTGA	4 cut(s)	269, 369, 1022, 1161
Hpy166II	GTNNAC	5 cut(s)	260, 370, 633, 738, 1809
Hpy188I	TCNGA	8 cut(s)	517, 606, 886, 1107, 1327, 1411, 1930, 2028
Hpy8I	GTNNAC	5 cut(s)	260, 370, 633, 738, 1809
HpyAV	CCTTC	7 cut(s)	61, 247, 390, 478, 1654, 1848, 1880
HpyCH4III	ACNGT	5 cut(s)	209, 776, 781, 1835, 2065
HpyCH4IV	ACGT	1 cut(s)	274
HpyF10VI	GCNNNNNNNGC	5 cut(s)	691, 1000, 1084, 1336, 1516
HpyF3I	CTNAG	6 cut(s)	665, 922, 1205, 1258, 1324, 1701
HpySE526I	ACGT	1 cut(s)	274
Hsp92II	CATG	7 cut(s)	181, 320, 722, 994, 1289, 1688, 1856
HspAI	GCGC	1 cut(s)	302
Kzo9I	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
LmnI	GCTCC	4 cut(s)	43, 445, 1516, 2026
Lsp1109I	GCAGC	3 cut(s)	138, 183, 328
LweI	GCATC	4 cut(s)	445, 847, 1225, 1291
MaeI	CTAG	7 cut(s)	392, 1079, 1194, 1200, 1277, 1371, 1734
MaeII	ACGT	1 cut(s)	274
MaeIII	GTNAC	3 cut(s)	674, 1464, 1922
MalI	GATC	8 cut(s)	519, 855, 972, 978, 1165, 1179, 1698, 1900
MboI	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
MflI	RGATCY	3 cut(s)	970, 1696, 1898
MhlI	GDGCHC	6 cut(s)	74, 718, 1159, 1332, 1711, 2023
MlsI	TGGCCA	1 cut(s)	83
MluNI	TGGCCA	1 cut(s)	83
MlyI	GAGTC	1 cut(s)	506
MmeI	TCCRAC	1 cut(s)	1926
Mox20I	TGGCCA	1 cut(s)	83
Mph1103I	ATGCAT	2 cut(s)	183, 1686
MscI	TGGCCA	1 cut(s)	83
MslI	CAYNNNNRTG	4 cut(s)	111, 207, 532, 1689
Msp20I	TGGCCA	1 cut(s)	83
MspI	CCGG	1 cut(s)	1272
MspR9I	CCNGG	5 cut(s)	160, 404, 541, 696, 1272
Mva1269I	GAATGC	1 cut(s)	1537
MvaI	CCWGG	4 cut(s)	160, 404, 541, 696
MvnI	CGCG	1 cut(s)	304
MwoI	GCNNNNNNNGC	5 cut(s)	691, 1000, 1084, 1336, 1516
NciI	CCSGG	1 cut(s)	1272
NdeI	CATATG	1 cut(s)	445
NdeII	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
NlaIII	CATG	7 cut(s)	181, 320, 722, 994, 1289, 1688, 1856
NlaIV	GGNNCC	5 cut(s)	45, 115, 441, 1158, 1900
NmuCI	GTSAC	1 cut(s)	674
NsiI	ATGCAT	2 cut(s)	183, 1686
NspI	RCATGY	4 cut(s)	181, 722, 994, 1289
NspV	TTCGAA	1 cut(s)	2038
OliI	CACNNNNGTG	1 cut(s)	111
PaeI	GCATGC	1 cut(s)	181
PciI	ACATGT	1 cut(s)	1285
PctI	GAATGC	1 cut(s)	1537
PfeI	GAWTC	7 cut(s)	7, 190, 320, 806, 1376, 1412, 1664
PkrI	GCNGC	4 cut(s)	128, 198, 201, 343
PleI	GAGTC	1 cut(s)	506
PpsI	GAGTC	1 cut(s)	506
PscI	ACATGT	1 cut(s)	1285
Psp6I	CCWGG	4 cut(s)	158, 402, 539, 694
PspGI	CCWGG	4 cut(s)	158, 402, 539, 694
PspN4I	GGNNCC	5 cut(s)	45, 115, 441, 1158, 1900
PspPI	GGNCC	2 cut(s)	926, 1835
PstI	CTGCAG	1 cut(s)	128
PstNI	CAGNNNCTG	1 cut(s)	1700
PsuI	RGATCY	3 cut(s)	970, 1696, 1898
RsaI	GTAC	9 cut(s)	773, 778, 876, 1115, 1312, 1459, 1810, 2050, 2097
RsaNI	GTAC	9 cut(s)	772, 777, 875, 1114, 1311, 1458, 1809, 2049, 2096
RseI	CAYNNNNRTG	4 cut(s)	111, 207, 532, 1689
SatI	GCNGC	4 cut(s)	127, 197, 200, 342
Sau3AI	GATC	8 cut(s)	517, 853, 970, 976, 1163, 1177, 1696, 1898
Sau96I	GGNCC	2 cut(s)	926, 1835
ScaI	AGTACT	2 cut(s)	778, 1115
SchI	GAGTC	1 cut(s)	506
ScrFI	CCNGG	5 cut(s)	160, 404, 541, 696, 1272
SduI	GDGCHC	6 cut(s)	74, 718, 1159, 1332, 1711, 2023
SfaNI	GCATC	4 cut(s)	445, 847, 1225, 1291
SfcI	CTRYAG	1 cut(s)	124
SfuI	TTCGAA	1 cut(s)	2038
SinI	GGWCC	2 cut(s)	926, 1835
SmiMI	CAYNNNNRTG	4 cut(s)	111, 207, 532, 1689
SmlI	CTYRAG	2 cut(s)	616, 864
SmoI	CTYRAG	2 cut(s)	616, 864
SphI	GCATGC	1 cut(s)	181
SsiI	CCGC	3 cut(s)	199, 237, 1433
SspMI	CTAG	7 cut(s)	392, 1079, 1194, 1200, 1277, 1371, 1734
StyD4I	CCNGG	5 cut(s)	158, 402, 539, 694, 1270
StyI	CCWWGG	1 cut(s)	1537
TaaI	ACNGT	5 cut(s)	209, 776, 781, 1835, 2065
TaiI	ACGT	1 cut(s)	277
TaqI	TCGA	4 cut(s)	35, 87, 2038, 2128
TatI	WGTACW	7 cut(s)	771, 776, 874, 1113, 1310, 1457, 1808
TauI	GCSGC	1 cut(s)	202
TfiI	GAWTC	7 cut(s)	7, 190, 320, 806, 1376, 1412, 1664
TscAI	CASTG	3 cut(s)	511, 1405, 1512
TseFI	GTSAC	1 cut(s)	674
TseI	GCWGC	3 cut(s)	126, 196, 341
Tsp45I	GTSAC	1 cut(s)	674
TspDTI	ATGAA	5 cut(s)	266, 816, 1296, 1635, 1869
TspGWI	ACGGA	1 cut(s)	2006
TspRI	CASTG	3 cut(s)	511, 1405, 1512
VpaK11BI	GGWCC	2 cut(s)	926, 1835
XapI	RAATTY	7 cut(s)	295, 563, 910, 1054, 1148, 1954, 2139
XbaI	TCTAGA	1 cut(s)	1276
XceI	RCATGY	4 cut(s)	181, 722, 994, 1289
XspI	CTAG	7 cut(s)	392, 1079, 1194, 1200, 1277, 1371, 1734
ZrmI	AGTACT	2 cut(s)	778, 1115
Zsp2I	ATGCAT	2 cut(s)	183, 1686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.