DNA recombination
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0033481 |
| rosa_laevigata | RLG00000017342 |
| rosa_roxburghii | Rroxscaffold_155G00443940 Rroxscaffold_2G00080350 Rroxscaffold_3G00273660 Rroxscaffold_6G00414580 |
| rosa_rugosa | Rorug02G0116500 |
| rosa_samantha | Rh1BG044100 Rh3AG127300 Rh3BG148700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 224 |
| AciI | CCGC | 1 cut(s) | 94 |
| AclWI | GGATC | 2 cut(s) | 270, 284 |
| AcuI | CTGAAG | 2 cut(s) | 157, 293 |
| AgsI | TTSAA | 1 cut(s) | 69 |
| AluBI | AGCT | 3 cut(s) | 63, 171, 241 |
| AluI | AGCT | 3 cut(s) | 63, 171, 241 |
| Alw21I | GWGCWC | 1 cut(s) | 13 |
| Alw26I | GTCTC | 1 cut(s) | 136 |
| Alw44I | GTGCAC | 1 cut(s) | 9 |
| AlwI | GGATC | 2 cut(s) | 270, 284 |
| ApaLI | GTGCAC | 1 cut(s) | 9 |
| ApeKI | GCWGC | 1 cut(s) | 168 |
| BaeGI | GKGCMC | 2 cut(s) | 13, 215 |
| BbsI | GAAGAC | 1 cut(s) | 130 |
| Bbv12I | GWGCWC | 1 cut(s) | 13 |
| BbvI | GCAGC | 1 cut(s) | 180 |
| BcoDI | GTCTC | 1 cut(s) | 136 |
| BisI | GCNGC | 1 cut(s) | 169 |
| BlsI | GCNGC | 1 cut(s) | 170 |
| BmsI | GCATC | 1 cut(s) | 187 |
| BpiI | GAAGAC | 1 cut(s) | 130 |
| BpmI | CTGGAG | 1 cut(s) | 43 |
| BsaI | GGTCTC | 1 cut(s) | 136 |
| Bse1I | ACTGG | 1 cut(s) | 91 |
| BseGI | GGATG | 1 cut(s) | 267 |
| BseNI | ACTGG | 1 cut(s) | 91 |
| BseSI | GKGCMC | 2 cut(s) | 13, 215 |
| BseXI | GCAGC | 1 cut(s) | 180 |
| BsiHKAI | GWGCWC | 1 cut(s) | 13 |
| BsmAI | GTCTC | 1 cut(s) | 136 |
| Bso31I | GGTCTC | 1 cut(s) | 136 |
| Bsp1286I | GDGCHC | 2 cut(s) | 13, 215 |
| Bsp143I | GATC | 2 cut(s) | 262, 289 |
| BspACI | CCGC | 1 cut(s) | 94 |
| BspPI | GGATC | 2 cut(s) | 270, 284 |
| BspTNI | GGTCTC | 1 cut(s) | 136 |
| BsrI | ACTGG | 1 cut(s) | 91 |
| BssMI | GATC | 2 cut(s) | 262, 289 |
| Bst4CI | ACNGT | 3 cut(s) | 129, 184, 217 |
| BstC8I | GCNNGC | 1 cut(s) | 256 |
| BstF5I | GGATG | 1 cut(s) | 267 |
| BstKTI | GATC | 2 cut(s) | 265, 292 |
| BstMAI | GTCTC | 1 cut(s) | 136 |
| BstMBI | GATC | 2 cut(s) | 262, 289 |
| BstNSI | RCATGY | 1 cut(s) | 258 |
| BstSLI | GKGCMC | 2 cut(s) | 13, 215 |
| BstV1I | GCAGC | 1 cut(s) | 180 |
| BstV2I | GAAGAC | 1 cut(s) | 130 |
| BstX2I | RGATCY | 2 cut(s) | 262, 289 |
| BstYI | RGATCY | 2 cut(s) | 262, 289 |
| BtsCI | GGATG | 1 cut(s) | 267 |
| BtsI | GCAGTG | 1 cut(s) | 102 |
| BtsIMutI | CAGTG | 4 cut(s) | 11, 102, 134, 213 |
| Cac8I | GCNNGC | 1 cut(s) | 256 |
| CseI | GACGC | 2 cut(s) | 96, 189 |
| CviAII | CATG | 2 cut(s) | 165, 255 |
| CviJI | RGCY | 3 cut(s) | 63, 171, 241 |
| CviKI_1 | RGCY | 3 cut(s) | 63, 171, 241 |
| DpnI | GATC | 2 cut(s) | 264, 291 |
| DpnII | GATC | 2 cut(s) | 262, 289 |
| Eco31I | GGTCTC | 1 cut(s) | 136 |
| Eco57I | CTGAAG | 2 cut(s) | 157, 293 |
| FaeI | CATG | 2 cut(s) | 168, 258 |
| FaiI | YATR | 7 cut(s) | 52, 166, 191, 224, 256, 285, 295 |
| FatI | CATG | 2 cut(s) | 164, 254 |
| Fnu4HI | GCNGC | 1 cut(s) | 169 |
| FokI | GGATG | 1 cut(s) | 254 |
| Fsp4HI | GCNGC | 1 cut(s) | 169 |
| GluI | GCNGC | 1 cut(s) | 169 |
| GsuI | CTGGAG | 1 cut(s) | 43 |
| HgaI | GACGC | 2 cut(s) | 96, 189 |
| Hin1II | CATG | 2 cut(s) | 168, 258 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy188I | TCNGA | 2 cut(s) | 176, 205 |
| Hpy188III | TCNNGA | 1 cut(s) | 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| HpyAV | CCTTC | 2 cut(s) | 29, 158 |
| HpyCH4III | ACNGT | 3 cut(s) | 129, 184, 217 |
| HpyCH4V | TGCA | 4 cut(s) | 11, 168, 254, 258 |
| Hsp92II | CATG | 2 cut(s) | 168, 258 |
| Kzo9I | GATC | 2 cut(s) | 262, 289 |
| LmnI | GCTCC | 1 cut(s) | 120 |
| LpnPI | CCDG | 4 cut(s) | 72, 73, 87, 284 |
| Lsp1109I | GCAGC | 1 cut(s) | 180 |
| LweI | GCATC | 1 cut(s) | 187 |
| MaeIII | GTNAC | 2 cut(s) | 76, 178 |
| MalI | GATC | 2 cut(s) | 264, 291 |
| MboI | GATC | 2 cut(s) | 262, 289 |
| MboII | GAAGA | 3 cut(s) | 135, 206, 286 |
| MflI | RGATCY | 2 cut(s) | 262, 289 |
| MhlI | GDGCHC | 2 cut(s) | 13, 215 |
| MluCI | AATT | 1 cut(s) | 69 |
| MnlI | CCTC | 4 cut(s) | 38, 67, 167, 202 |
| MspA1I | CMGCKG | 2 cut(s) | 63, 94 |
| NdeII | GATC | 2 cut(s) | 262, 289 |
| NlaIII | CATG | 2 cut(s) | 168, 258 |
| NmuCI | GTSAC | 1 cut(s) | 76 |
| NspI | RCATGY | 1 cut(s) | 258 |
| PaeI | GCATGC | 1 cut(s) | 258 |
| PkrI | GCNGC | 1 cut(s) | 170 |
| PsiI | TTATAA | 1 cut(s) | 224 |
| PsuI | RGATCY | 2 cut(s) | 262, 289 |
| PvuII | CAGCTG | 1 cut(s) | 63 |
| SatI | GCNGC | 1 cut(s) | 169 |
| Sau3AI | GATC | 2 cut(s) | 262, 289 |
| SduI | GDGCHC | 2 cut(s) | 13, 215 |
| SetI | ASST | 3 cut(s) | 65, 173, 243 |
| SfaNI | GCATC | 1 cut(s) | 187 |
| SgeI | CNNG | 9 cut(s) | 45, 72, 86, 99, 177, 248, 267, 271, 283 |
| SphI | GCATGC | 1 cut(s) | 258 |
| Sse9I | AATT | 1 cut(s) | 69 |
| SsiI | CCGC | 1 cut(s) | 94 |
| TaaI | ACNGT | 3 cut(s) | 129, 184, 217 |
| TasI | AATT | 1 cut(s) | 69 |
| TscAI | CASTG | 4 cut(s) | 18, 109, 134, 220 |
| TseFI | GTSAC | 1 cut(s) | 76 |
| TseI | GCWGC | 1 cut(s) | 168 |
| Tsp45I | GTSAC | 1 cut(s) | 76 |
| TspDTI | ATGAA | 2 cut(s) | 17, 153 |
| TspGWI | ACGGA | 1 cut(s) | 61 |
| TspRI | CASTG | 4 cut(s) | 18, 109, 134, 220 |
| VneI | GTGCAC | 1 cut(s) | 9 |
| XceI | RCATGY | 1 cut(s) | 258 |