Rroxscaffold_6G00414580

O-acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
36902326 .. 36907012
4687 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_6G00414580.1

Sequence Viewer

Length: 285 bp
ATGGAAGAATTGTTTGTCAATTATTCTCCAAAGAAAACAACCAAGTTGCAGATGCTTTTTCAGATCGGTAGGTTAAATATTCTTGCTGAGCTGCTGTGTTTTGGGGATCGAGAGTTCTATAAAGATCGCTGGAATGCAAAAACAGTTGAGGAGTCTCTTCTATTCCTCTATTCATGCAGCTTCAGAGTAACTGCTGTTGTAGAAGACGTGTTTGATGAGGGCACTGCTATTATAATGGGAAAACAAGATGAAGAGCTATTCGGAACTGCTGAAGAAAAACTTTAA

Protein Analysis

94

Amino Acids

10.94

Weight (kDa)

4.62

Isoelectric Point (pI)

55.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 233
AclWI GGATC 1 cut(s) 114
AcuI CTGAAG 1 cut(s) 166
AflIII ACRYGT 1 cut(s) 207
AjiI CACGTC 1 cut(s) 208
AloI GAACNNNNNNTCC 2 cut(s) 98, 130
AluBI AGCT 3 cut(s) 91, 180, 256
AluI AGCT 3 cut(s) 91, 180, 256
Alw26I GTCTC 1 cut(s) 159
AlwI GGATC 1 cut(s) 114
ApeKI GCWGC 2 cut(s) 91, 177
BaeGI GKGCMC 1 cut(s) 224
BbsI GAAGAC 1 cut(s) 210
BbvI GCAGC 2 cut(s) 78, 189
BcoDI GTCTC 1 cut(s) 159
BisI GCNGC 2 cut(s) 92, 178
BlpI GCTNAGC 1 cut(s) 87
BlsI GCNGC 2 cut(s) 93, 179
BmgBI CACGTC 1 cut(s) 208
BmsI GCATC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 210
Bpu1102I GCTNAGC 1 cut(s) 87
BseMII CTCAG 1 cut(s) 78
BseRI GAGGAG 1 cut(s) 164
BseSI GKGCMC 1 cut(s) 224
BseXI GCAGC 2 cut(s) 78, 189
BsmAI GTCTC 1 cut(s) 159
BsmI GAATGC 1 cut(s) 139
Bsp1286I GDGCHC 1 cut(s) 224
Bsp143I GATC 3 cut(s) 63, 106, 124
Bsp1720I GCTNAGC 1 cut(s) 87
BspCNI CTCAG 1 cut(s) 79
BspPI GGATC 1 cut(s) 114
BspQI GCTCTTC 1 cut(s) 246
BssMI GATC 3 cut(s) 63, 106, 124
Bst4CI ACNGT 1 cut(s) 145
Bst6I CTCTTC 2 cut(s) 162, 246
BstDEI CTNAG 1 cut(s) 87
BstKTI GATC 3 cut(s) 66, 109, 127
BstMAI GTCTC 1 cut(s) 159
BstMBI GATC 3 cut(s) 63, 106, 124
BstSLI GKGCMC 1 cut(s) 224
BstV1I GCAGC 2 cut(s) 78, 189
BstV2I GAAGAC 1 cut(s) 210
BtrI CACGTC 1 cut(s) 208
BtsI GCAGTG 1 cut(s) 222
BtsIMutI CAGTG 1 cut(s) 222
CviAII CATG 1 cut(s) 174
CviJI RGCY 3 cut(s) 91, 180, 256
CviKI_1 RGCY 3 cut(s) 91, 180, 256
DdeI CTNAG 1 cut(s) 87
DpnI GATC 3 cut(s) 65, 108, 126
DpnII GATC 3 cut(s) 63, 106, 124
Eam1104I CTCTTC 2 cut(s) 162, 246
EarI CTCTTC 2 cut(s) 162, 246
Eco57I CTGAAG 1 cut(s) 166
FaeI CATG 1 cut(s) 177
FaiI YATR 3 cut(s) 120, 175, 233
FalI AAGNNNNNCTT 1 cut(s) 264
FatI CATG 1 cut(s) 173
Fnu4HI GCNGC 2 cut(s) 92, 178
Fsp4HI GCNGC 2 cut(s) 92, 178
GluI GCNGC 2 cut(s) 92, 178
Hin1II CATG 1 cut(s) 177
HinfI GANTC 1 cut(s) 152
Hpy188I TCNGA 3 cut(s) 63, 185, 263
Hpy188III TCNNGA 1 cut(s) 110
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 3 cut(s) 49, 137, 177
HpyF3I CTNAG 1 cut(s) 87
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 1 cut(s) 177
Kzo9I GATC 3 cut(s) 63, 106, 124
LguI GCTCTTC 1 cut(s) 246
LpnPI CCDG 1 cut(s) 115
Lsp1109I GCAGC 2 cut(s) 78, 189
LweI GCATC 1 cut(s) 42
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 1 cut(s) 187
MalI GATC 3 cut(s) 65, 108, 126
MboI GATC 3 cut(s) 63, 106, 124
MboII GAAGA 5 cut(s) 17, 149, 215, 263, 284
MhlI GDGCHC 1 cut(s) 224
MluCI AATT 2 cut(s) 8, 19
MlyI GAGTC 1 cut(s) 161
MnlI CCTC 3 cut(s) 142, 176, 211
MseI TTAA 2 cut(s) 74, 283
Mva1269I GAATGC 1 cut(s) 139
NdeII GATC 3 cut(s) 63, 106, 124
NlaIII CATG 1 cut(s) 177
PciSI GCTCTTC 1 cut(s) 246
PctI GAATGC 1 cut(s) 139
PkrI GCNGC 2 cut(s) 93, 179
PleI GAGTC 1 cut(s) 160
PpsI GAGTC 1 cut(s) 160
PsiI TTATAA 1 cut(s) 233
SapI GCTCTTC 1 cut(s) 246
SaqAI TTAA 2 cut(s) 74, 283
SatI GCNGC 2 cut(s) 92, 178
Sau3AI GATC 3 cut(s) 63, 106, 124
SchI GAGTC 1 cut(s) 161
SduI GDGCHC 1 cut(s) 224
SetI ASST 5 cut(s) 74, 93, 182, 210, 258
SfaNI GCATC 1 cut(s) 42
SgeI CNNG 7 cut(s) 55, 95, 122, 142, 186, 220, 257
Sse9I AATT 2 cut(s) 8, 19
SspI AATATT 1 cut(s) 79
TaaI ACNGT 1 cut(s) 145
TaiI ACGT 1 cut(s) 210
TaqI TCGA 1 cut(s) 109
TasI AATT 2 cut(s) 8, 19
Tru1I TTAA 2 cut(s) 74, 283
Tru9I TTAA 2 cut(s) 74, 283
TscAI CASTG 1 cut(s) 229
TseI GCWGC 2 cut(s) 91, 177
TspDTI ATGAA 2 cut(s) 162, 264
TspRI CASTG 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.