Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0018066

Physical Location & Seq

Genomic Coordinates Reverse (-)

5569906 .. 5573580

Gene Structure 3675 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00082840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGGCGTCCATGGTGGCGACCTGCTTCACACTTCAACCAACTCTTCATCCTGGTCTCGCTTTCAACAGTTCACTCTTCCCTAACCCTAGACCTCTCAAAACCTTTCCTGATCCTATTCTAACACCGATCTTCCAGGTATGCTTTTCTGCGAAGCTTCAAGAACCTAGGGTTTTGGTCCCCGTTTCCAGAGCGTGCCTCGGCTCCGCCACTGGGATTAGAAAAGACGGCGGCGGCGCTGATTTCAAGGGTGGAAGATCACCATCTTGGAGGCCACGAGCAGTCGGAGCACAGAGTGATCATGAGACCTCATCTGAACCCAAAAAAAATGTCATACTCCAATTCGTCGAATCCATTCGGTCATTCATGTTTGGCGATGGCGATCCAAATAGGGTAACGAAAGAGGAGAGATGGAAGTTGATTGGGCAATACATAACCTCCAAGGGCGGTGTTGTTGCAGGTGAAGAACTTGCTCCATATCTTGACCCTTTAGAAACTAAAGGGAAAAATGACAGCCTTCCGATCAACGACGAAACATACATGCTGCCGGTTCTGATGAGGTACGAGGGTCATCCCGTGATTGAAGAAGACGGAAACGTTCTATACCGGTTTATATCTCTGCAACCCACAGCCAAGGAATCGAGTGATCCTAATTTTGTCAAAGGAGCACTACTTAAGAAAAAGTTTTTCATGGAGAATAAGTGGCGGTTCAGCAAGGCTAGCACTTTGGAGAAGGCAGTGATTGTAGGGTTTGGTGGACTTTGTTGGAAAGGGATTCATATGCTTTCCGAGGGTTTGCTTCTGGAATCTCCAATTGCACCCGGTGGTTATGTTACGTTTTTCTCTGCAATGCTTCCAGTACTTCAGGCTTGTGTTATTTCCATCACCGCTATTCCTTCGTTGAGATTCGTTTTGTTTTGCATCATTTTCCTTAAGAGAAATGCTGATATTAAGAAAAGAAATCTAGCAAGACAGCGATGTGCTCGGGATCTTGAGTCCCCGGATCTAGCACTGAGACAAAAGCTCCAAGCTGCTCGGGACATGGCCAAAAGGTTGACTATAGTCGTGACTGCGGGCCAGGAGGATATGCCTGTTAATGTCTATGGTACTAATAGGAGTACTAGTGGGAAGCTTGTGTATCAGACTACTAAGAAGAGAGCCAGTGGACCAAAATGCCCTGTGACTGGCAAGAGAATCCAAGGGATTCCTCACTTGAGACCTGCTGAGTACAAGAGGTCCAGATTGTCCAGGAACCGCAGGACGGTGAACCGGGCATATGGTGGTGTCTTGTCTGGAGGTGCTGTCAGAGAGAGGATTATTCGAGCCTTCTTGGTAGAAGAGCAAAAGATTGTGAAGAAGGTTTTGAAGATCCAGAAGGCTAAGGAAAGGCAGGCAGCCAAGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008198 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016226 GO:0019538 GO:0022607 GO:0031163 GO:0031967 GO:0031974 GO:0031975 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0048037 GO:0051186 GO:0051536 GO:0051537 GO:0051540 GO:0051604 GO:0070013 GO:0071704 GO:0071840 GO:0097428 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

467

Amino Acids

51.85

Weight (kDa)

10.01

Isoelectric Point (pI)

50.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_L34e	PF01199	365 - 443	4.5e-23	Ribosomal protein L34e

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018066)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g48690
rosa_chinensis	RchiOBHm_Chr2g0168601
rosa_laevigata	RLG00000021790
rosa_multiflora	Rmu_sc0002416.1_g000011
rosa_roxburghii	Rroxscaffold_2G00082840
rosa_rugosa	Rorug02G0534200
rosa_samantha	Rh2AG604700 Rh2BG617700 Rh2CG585900 Rh2DG628300
rosa_wichuraiana	Rw2G050120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	446
Acc36I	ACCTGC	3 cut(s)	29, 446, 1225
AciI	CCGC	8 cut(s)	204, 228, 231, 444, 703, 885, 1070, 1252
AclI	AACGTT	1 cut(s)	594
AclWI	GGATC	6 cut(s)	104, 374, 638, 993, 1008, 1360
AcoI	YGGCCR	1 cut(s)	1041
AcuI	CTGAAG	1 cut(s)	845
AcyI	GRCGYC	1 cut(s)	5
AdeI	CACNNNGTG	2 cut(s)	293, 821
AfaI	GTAC	5 cut(s)	560, 858, 1105, 1117, 1226
AfiI	CCNNNNNNNGG	3 cut(s)	210, 1181, 1258
AflII	CTTAAG	2 cut(s)	671, 929
AgeI	ACCGGT	1 cut(s)	603
AgsI	TTSAA	6 cut(s)	35, 64, 158, 244, 581, 1363
AhlI	ACTAGT	1 cut(s)	1118
AjnI	CCWGG	4 cut(s)	49, 132, 1074, 1244
AluBI	AGCT	5 cut(s)	154, 1021, 1028, 1129, 1401
AluI	AGCT	5 cut(s)	154, 1021, 1028, 1129, 1401
Alw21I	GWGCWC	3 cut(s)	289, 667, 982
Alw26I	GTCTC	4 cut(s)	59, 296, 1006, 1207
AlwI	GGATC	6 cut(s)	104, 374, 638, 993, 1008, 1360
Ama87I	CYCGRG	2 cut(s)	981, 1032
AoxI	GGCC	3 cut(s)	269, 1041, 1072
ApeKI	GCWGC	3 cut(s)	541, 1028, 1391
ArsI	GACNNNNNNTTYG	2 cut(s)	312, 344
AsiGI	ACCGGT	1 cut(s)	603
Asp700I	GAANNNNTTC	1 cut(s)	351
AspA2I	CCTAGG	1 cut(s)	164
AspLEI	GCGC	1 cut(s)	236
AspS9I	GGNCC	4 cut(s)	175, 1072, 1163, 1233
AsuC2I	CCSGG	3 cut(s)	819, 998, 1268
AsuHPI	GGTGA	4 cut(s)	249, 470, 874, 1273
AsuNHI	GCTAGC	1 cut(s)	716
AvaI	CYCGRG	2 cut(s)	981, 1032
AvaII	GGWCC	3 cut(s)	175, 1163, 1233
AvrII	CCTAGG	1 cut(s)	164
BaeI	ACNNNNGTAYC	2 cut(s)	550, 583
BalI	TGGCCA	1 cut(s)	1043
BauI	CACGAG	1 cut(s)	273
BbsI	GAAGAC	1 cut(s)	591
Bbv12I	GWGCWC	3 cut(s)	289, 667, 982
BbvI	GCAGC	2 cut(s)	528, 1015
BccI	CCATC	4 cut(s)	268, 368, 402, 887
BceAI	ACGGC	1 cut(s)	241
BciT130I	CCWGG	4 cut(s)	51, 134, 1076, 1246
BclI	TGATCA	1 cut(s)	295
BcnI	CCSGG	3 cut(s)	819, 998, 1268
BcoDI	GTCTC	4 cut(s)	59, 296, 1006, 1207
BcuI	ACTAGT	1 cut(s)	1118
BfaI	CTAG	6 cut(s)	87, 165, 717, 962, 1004, 1119
BfmI	CTRYAG	1 cut(s)	1056
BfoI	RGCGCY	1 cut(s)	237
BfrI	CTTAAG	2 cut(s)	671, 929
BfuAI	ACCTGC	3 cut(s)	29, 446, 1225
BisI	GCNGC	5 cut(s)	229, 232, 542, 1029, 1392
BlnI	CCTAGG	1 cut(s)	164
BlsI	GCNGC	5 cut(s)	230, 233, 543, 1030, 1393
BmcAI	AGTACT	2 cut(s)	858, 1117
Bme1390I	CCNGG	7 cut(s)	51, 134, 819, 998, 1076, 1246, 1268
Bme18I	GGWCC	3 cut(s)	175, 1163, 1233
BmeT110I	CYCGRG	2 cut(s)	981, 1032
BmgT120I	GGNCC	4 cut(s)	175, 1072, 1163, 1233
BmiI	GGNNCC	3 cut(s)	177, 202, 1250
BmrFI	CCNGG	7 cut(s)	51, 134, 819, 998, 1076, 1246, 1268
BmrI	ACTGGG	1 cut(s)	219
BmsI	GCATC	1 cut(s)	927
BmtI	GCTAGC	1 cut(s)	720
BmuI	ACTGGG	1 cut(s)	219
BoxI	GACNNNNGTC	1 cut(s)	1058
BpiI	GAAGAC	1 cut(s)	591
BplI	GAGNNNNNCTC	2 cut(s)	180, 212
BpmI	CTGGAG	1 cut(s)	1311
Bpu10I	CCTNAGC	1 cut(s)	1377
BpuEI	CTTGAG	2 cut(s)	1010, 1231
BpuMI	CCSGG	3 cut(s)	819, 998, 1268
BsaBI	GATNNNNATC	2 cut(s)	259, 378
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	3 cut(s)	59, 296, 1207
BsaJI	CCNNGG	8 cut(s)	9, 164, 196, 438, 630, 786, 996, 1195
BsaWI	WCCGGW	1 cut(s)	603
Bsc4I	CCNNNNNNNGG	3 cut(s)	210, 1181, 1258
Bse118I	RCCGGY	2 cut(s)	544, 603
Bse1I	ACTGG	4 cut(s)	214, 854, 1158, 1186
Bse3DI	GCAATG	1 cut(s)	852
Bse8I	GATNNNNATC	2 cut(s)	259, 378
BseBI	CCWGG	4 cut(s)	51, 134, 1076, 1246
BseDI	CCNNGG	8 cut(s)	9, 164, 196, 438, 630, 786, 996, 1195
BseGI	GGATG	2 cut(s)	46, 568
BseJI	GATNNNNATC	2 cut(s)	259, 378
BseLI	CCNNNNNNNGG	3 cut(s)	210, 1181, 1258
BseMI	GCAATG	1 cut(s)	852
BseMII	CTCAG	2 cut(s)	1001, 1212
BseNI	ACTGG	4 cut(s)	214, 854, 1158, 1186
BseRI	GAGGAG	1 cut(s)	416
BseXI	GCAGC	2 cut(s)	528, 1015
BshFI	GGCC	3 cut(s)	271, 1043, 1074
BshTI	ACCGGT	1 cut(s)	603
BsiHKAI	GWGCWC	3 cut(s)	289, 667, 982
BsiHKCI	CYCGRG	2 cut(s)	981, 1032
BsiSI	CCGG	5 cut(s)	545, 604, 819, 998, 1267
BslFI	GGGAC	3 cut(s)	161, 979, 1049
BslI	CCNNNNNNNGG	3 cut(s)	210, 1181, 1258
BsmAI	GTCTC	4 cut(s)	59, 296, 1006, 1207
BsmFI	GGGAC	3 cut(s)	161, 979, 1049
BsnI	GGCC	3 cut(s)	271, 1043, 1074
Bso31I	GGTCTC	3 cut(s)	59, 296, 1207
BsoBI	CYCGRG	2 cut(s)	981, 1032
Bsp1286I	GDGCHC	3 cut(s)	289, 667, 982
Bsp19I	CCATGG	1 cut(s)	9
BspACI	CCGC	8 cut(s)	204, 228, 231, 444, 703, 885, 1070, 1252
BspANI	GGCC	3 cut(s)	271, 1043, 1074
BspCNI	CTCAG	2 cut(s)	1002, 1213
BspHI	TCATGA	1 cut(s)	298
BspLI	GGNNCC	3 cut(s)	177, 202, 1250
BspMI	ACCTGC	3 cut(s)	29, 446, 1225
BspOI	GCTAGC	1 cut(s)	720
BspPI	GGATC	6 cut(s)	104, 374, 638, 993, 1008, 1360
BspQI	GCTCTTC	1 cut(s)	1329
BspTI	CTTAAG	2 cut(s)	671, 929
BspTNI	GGTCTC	3 cut(s)	59, 296, 1207
BsrDI	GCAATG	1 cut(s)	852
BsrFI	RCCGGY	2 cut(s)	544, 603
BsrI	ACTGG	4 cut(s)	214, 854, 1158, 1186
BssAI	RCCGGY	2 cut(s)	544, 603
BssECI	CCNNGG	8 cut(s)	9, 164, 196, 438, 630, 786, 996, 1195
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	273
BssT1I	CCWWGG	5 cut(s)	9, 164, 438, 630, 1195
Bst2BI	CACGAG	1 cut(s)	273
Bst2UI	CCWGG	4 cut(s)	51, 134, 1076, 1246
Bst4CI	ACNGT	2 cut(s)	68, 1261
Bst6I	CTCTTC	4 cut(s)	48, 80, 1145, 1329
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	2 cut(s)	671, 929
BstC8I	GCNNGC	4 cut(s)	193, 718, 1072, 1389
BstDEI	CTNAG	4 cut(s)	1010, 1146, 1221, 1377
BstDSI	CCRYGG	1 cut(s)	9
BstF5I	GGATG	2 cut(s)	46, 568
BstH2I	RGCGCY	1 cut(s)	237
BstHHI	GCGC	1 cut(s)	236
BstMAI	GTCTC	4 cut(s)	59, 296, 1006, 1207
BstMWI	GCNNNNNNNGC	2 cut(s)	284, 717
BstNI	CCWGG	4 cut(s)	51, 134, 1076, 1246
BstNSI	RCATGY	1 cut(s)	541
BstPAI	GACNNNNGTC	1 cut(s)	1058
BstSCI	CCNGG	7 cut(s)	49, 132, 817, 996, 1074, 1244, 1266
BstSFI	CTRYAG	1 cut(s)	1056
BstV1I	GCAGC	2 cut(s)	528, 1015
BstV2I	GAAGAC	1 cut(s)	591
BstX2I	RGATCY	3 cut(s)	985, 1000, 1365
BstYI	RGATCY	3 cut(s)	985, 1000, 1365
BsuRI	GGCC	3 cut(s)	271, 1043, 1074
BtgI	CCRYGG	1 cut(s)	9
BtgZI	GCGATG	2 cut(s)	387, 988
BtsCI	GGATG	2 cut(s)	46, 568
BtsI	GCAGTG	1 cut(s)	741
BtsIMutI	CAGTG	4 cut(s)	207, 741, 1007, 1165
BveI	ACCTGC	3 cut(s)	29, 446, 1225
Cac8I	GCNNGC	4 cut(s)	193, 718, 1072, 1389
CciI	TCATGA	1 cut(s)	298
CfoI	GCGC	1 cut(s)	236
Cfr10I	RCCGGY	2 cut(s)	544, 603
Cfr13I	GGNCC	4 cut(s)	175, 1072, 1163, 1233
Csp6I	GTAC	5 cut(s)	559, 857, 1104, 1116, 1225
CspAI	ACCGGT	1 cut(s)	603
CviAII	CATG	6 cut(s)	10, 299, 364, 538, 688, 1039
CviQI	GTAC	5 cut(s)	559, 857, 1104, 1116, 1225
DdeI	CTNAG	4 cut(s)	1010, 1146, 1221, 1377
DraIII	CACNNNGTG	2 cut(s)	293, 821
EaeI	YGGCCR	1 cut(s)	1041
Eam1104I	CTCTTC	4 cut(s)	48, 80, 1145, 1329
EarI	CTCTTC	4 cut(s)	48, 80, 1145, 1329
EciI	GGCGGA	1 cut(s)	193
Eco130I	CCWWGG	5 cut(s)	9, 164, 438, 630, 1195
Eco31I	GGTCTC	3 cut(s)	59, 296, 1207
Eco47I	GGWCC	3 cut(s)	175, 1163, 1233
Eco57I	CTGAAG	1 cut(s)	845
Eco88I	CYCGRG	2 cut(s)	981, 1032
EcoRII	CCWGG	4 cut(s)	49, 132, 1074, 1244
EcoT14I	CCWWGG	5 cut(s)	9, 164, 438, 630, 1195
ErhI	CCWWGG	5 cut(s)	9, 164, 438, 630, 1195
FaeI	CATG	6 cut(s)	13, 302, 367, 541, 691, 1042
FaqI	GGGAC	3 cut(s)	161, 979, 1049
FatI	CATG	6 cut(s)	9, 298, 363, 537, 687, 1038
FauI	CCCGC	1 cut(s)	1063
FauNDI	CATATG	2 cut(s)	777, 1273
FbaI	TGATCA	1 cut(s)	295
Fnu4HI	GCNGC	5 cut(s)	229, 232, 542, 1029, 1392
FokI	GGATG	2 cut(s)	33, 555
Fsp4HI	GCNGC	5 cut(s)	229, 232, 542, 1029, 1392
FspBI	CTAG	6 cut(s)	87, 165, 717, 962, 1004, 1119
GlaI	GCGC	1 cut(s)	235
GluI	GCNGC	5 cut(s)	229, 232, 542, 1029, 1392
GsuI	CTGGAG	1 cut(s)	1311
HaeII	RGCGCY	1 cut(s)	237
HaeIII	GGCC	3 cut(s)	271, 1043, 1074
HapII	CCGG	5 cut(s)	545, 604, 819, 998, 1267
HhaI	GCGC	1 cut(s)	236
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	6 cut(s)	13, 302, 367, 541, 691, 1042
Hin6I	GCGC	1 cut(s)	234
HinP1I	GCGC	1 cut(s)	234
HincII	GTYRAC	1 cut(s)	1053
HindII	GTYRAC	1 cut(s)	1053
HindIII	AAGCTT	2 cut(s)	152, 1127
HinfI	GANTC	8 cut(s)	347, 635, 772, 803, 903, 992, 1191, 1201
HpaII	CCGG	5 cut(s)	545, 604, 819, 998, 1267
HphI	GGTGA	4 cut(s)	249, 470, 874, 1273
Hpy166II	GTNNAC	5 cut(s)	71, 755, 1053, 1163, 1264
Hpy188I	TCNGA	7 cut(s)	284, 313, 519, 552, 787, 1140, 1304
Hpy8I	GTNNAC	5 cut(s)	71, 755, 1053, 1163, 1264
Hpy99I	CGWCG	2 cut(s)	347, 530
HpyAV	CCTTC	6 cut(s)	524, 724, 903, 1333, 1348, 1366
HpyCH4III	ACNGT	2 cut(s)	68, 1261
HpyCH4IV	ACGT	2 cut(s)	594, 833
HpyCH4V	TGCA	5 cut(s)	455, 619, 815, 845, 918
HpyF10VI	GCNNNNNNNGC	2 cut(s)	284, 717
HpyF3I	CTNAG	4 cut(s)	1010, 1146, 1221, 1377
HpySE526I	ACGT	2 cut(s)	594, 833
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	6 cut(s)	13, 302, 367, 541, 691, 1042
HspAI	GCGC	1 cut(s)	234
Ksp22I	TGATCA	1 cut(s)	295
LguI	GCTCTTC	1 cut(s)	1329
LmnI	GCTCC	5 cut(s)	206, 284, 475, 662, 1026
Lsp1109I	GCAGC	2 cut(s)	528, 1015
LweI	GCATC	1 cut(s)	927
MaeI	CTAG	6 cut(s)	87, 165, 717, 962, 1004, 1119
MaeII	ACGT	2 cut(s)	594, 833
MaeIII	GTNAC	4 cut(s)	391, 829, 1063, 1177
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	3 cut(s)	985, 1000, 1365
MhlI	GDGCHC	3 cut(s)	289, 667, 982
MlsI	TGGCCA	1 cut(s)	1043
MluCI	AATT	3 cut(s)	338, 649, 810
MluNI	TGGCCA	1 cut(s)	1043
MlyI	GAGTC	1 cut(s)	1001
MmeI	TCCRAC	2 cut(s)	262, 743
Mox20I	TGGCCA	1 cut(s)	1043
MroXI	GAANNNNTTC	1 cut(s)	351
MscI	TGGCCA	1 cut(s)	1043
MseI	TTAA	4 cut(s)	672, 930, 948, 1092
Msp20I	TGGCCA	1 cut(s)	1043
MspCI	CTTAAG	2 cut(s)	671, 929
MspI	CCGG	5 cut(s)	545, 604, 819, 998, 1267
MspR9I	CCNGG	7 cut(s)	51, 134, 819, 998, 1076, 1246, 1268
MunI	CAATTG	1 cut(s)	810
MvaI	CCWGG	4 cut(s)	51, 134, 1076, 1246
MwoI	GCNNNNNNNGC	2 cut(s)	284, 717
NciI	CCSGG	3 cut(s)	819, 998, 1268
NcoI	CCATGG	1 cut(s)	9
NdeI	CATATG	2 cut(s)	777, 1273
NheI	GCTAGC	1 cut(s)	716
NlaIII	CATG	6 cut(s)	13, 302, 367, 541, 691, 1042
NlaIV	GGNNCC	3 cut(s)	177, 202, 1250
NmeAIII	GCCGAG	1 cut(s)	177
NmuCI	GTSAC	2 cut(s)	1063, 1177
NspI	RCATGY	1 cut(s)	541
PagI	TCATGA	1 cut(s)	298
PaqCI	CACCTGC	1 cut(s)	446
PciSI	GCTCTTC	1 cut(s)	1329
PdmI	GAANNNNTTC	1 cut(s)	351
PfeI	GAWTC	7 cut(s)	347, 635, 772, 803, 903, 1191, 1201
PfoI	TCCNGGA	1 cut(s)	1244
PinAI	ACCGGT	1 cut(s)	603
PkrI	GCNGC	5 cut(s)	230, 233, 543, 1030, 1393
PleI	GAGTC	1 cut(s)	1000
PpsI	GAGTC	1 cut(s)	1000
PshAI	GACNNNNGTC	1 cut(s)	1058
Psp1406I	AACGTT	1 cut(s)	594
Psp6I	CCWGG	4 cut(s)	49, 132, 1074, 1244
PspGI	CCWGG	4 cut(s)	49, 132, 1074, 1244
PspN4I	GGNNCC	3 cut(s)	177, 202, 1250
PspPI	GGNCC	4 cut(s)	175, 1072, 1163, 1233
PsuI	RGATCY	3 cut(s)	985, 1000, 1365
RsaI	GTAC	5 cut(s)	560, 858, 1105, 1117, 1226
RsaNI	GTAC	5 cut(s)	559, 857, 1104, 1116, 1225
SapI	GCTCTTC	1 cut(s)	1329
SaqAI	TTAA	4 cut(s)	672, 930, 948, 1092
SatI	GCNGC	5 cut(s)	229, 232, 542, 1029, 1392
Sau96I	GGNCC	4 cut(s)	175, 1072, 1163, 1233
ScaI	AGTACT	2 cut(s)	858, 1117
SchI	GAGTC	1 cut(s)	1001
ScrFI	CCNGG	7 cut(s)	51, 134, 819, 998, 1076, 1246, 1268
SduI	GDGCHC	3 cut(s)	289, 667, 982
SfaNI	GCATC	1 cut(s)	927
SfcI	CTRYAG	1 cut(s)	1056
SinI	GGWCC	3 cut(s)	175, 1163, 1233
SmlI	CTYRAG	4 cut(s)	671, 929, 989, 1210
SmoI	CTYRAG	4 cut(s)	671, 929, 989, 1210
SpeI	ACTAGT	1 cut(s)	1118
Sse9I	AATT	3 cut(s)	338, 649, 810
SsiI	CCGC	8 cut(s)	204, 228, 231, 444, 703, 885, 1070, 1252
SspMI	CTAG	6 cut(s)	87, 165, 717, 962, 1004, 1119
StyD4I	CCNGG	7 cut(s)	49, 132, 817, 996, 1074, 1244, 1266
StyI	CCWWGG	5 cut(s)	9, 164, 438, 630, 1195
TaaI	ACNGT	2 cut(s)	68, 1261
TaiI	ACGT	2 cut(s)	597, 836
TaqI	TCGA	3 cut(s)	345, 638, 1318
TaqII	GACCGA	1 cut(s)	345
TasI	AATT	3 cut(s)	338, 649, 810
TatI	WGTACW	3 cut(s)	856, 1115, 1224
TauI	GCSGC	2 cut(s)	231, 234
TfiI	GAWTC	7 cut(s)	347, 635, 772, 803, 903, 1191, 1201
Tru1I	TTAA	4 cut(s)	672, 930, 948, 1092
Tru9I	TTAA	4 cut(s)	672, 930, 948, 1092
TscAI	CASTG	4 cut(s)	214, 741, 1014, 1165
TseFI	GTSAC	2 cut(s)	1063, 1177
TseI	GCWGC	3 cut(s)	541, 1028, 1391
Tsp45I	GTSAC	2 cut(s)	1063, 1177
TspDTI	ATGAA	4 cut(s)	35, 352, 676, 764
TspGWI	ACGGA	1 cut(s)	603
TspRI	CASTG	4 cut(s)	214, 741, 1014, 1165
Vha464I	CTTAAG	2 cut(s)	671, 929
VpaK11BI	GGWCC	3 cut(s)	175, 1163, 1233
XceI	RCATGY	1 cut(s)	541
XmaJI	CCTAGG	1 cut(s)	164
XmnI	GAANNNNTTC	1 cut(s)	351
XspI	CTAG	6 cut(s)	87, 165, 717, 962, 1004, 1119
ZrmI	AGTACT	2 cut(s)	858, 1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.